HG10021885 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10021885
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	Encodes a protein involved in salt tolerance, names SIS (Salt Induced Serine rich).
Location	Chr05: 17928795 .. 17930334 (-)
RNA-Seq Expression	HG10021885
Synteny	HG10021885

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGGGAAAGTCTAAAGGGTATCAAGCCTCCTCTTTCGTTGCCGATCTTTTCGATGTCAAGGAGCCGCCATTGTCATCCGCATCAGGAGTCTTTGCAGCAATCTTTCCATCTCCACAGAAGGTAATGCTGCTCTTTTTGAACTGCTCCTTAACTCATACATCGGGCTGTTATGTGCTAAGGATTAGGAGGATGGTTTTTTGAAACTTATGTAGTATTTTCTAAAGTTCATTGCTTAAGGTCCCCCTATTTTTTCGCTTATTGGCAATGATATATTTTTGTCCTGAATTCCCACCTCGACCAGTATTGCAAGTTTTGTTGCAGGAATCTTGTGTAAGGTTTTTATTGCAAACCTTCACATATATTTCATTTTAGTTCTTATATTTCCAAATATTTGGTTCTGATCCTTAAACTTTCACAAATTGTTATTATTATATATAGCAGAGATCTTTGGCCATCTGTCATCGTTTTTGGTATCAAACTCGATTTTTGTGACATAGAATTTGAGTCTGCATTTGTACTCGAATGTATATGAAATTATTGTTAAGGACTAAAATGAACTTTTACTTCAAAAATAAAACAGGACGTTCAAACTACAGGGAGGGACCATGAAGTCAACAATAAGATTTATACATGTTATTCCTTACATTTCATACTCTTCCTTCTTAATTTTAATTTTACATTTCTGAAAAATGGTAATTATATGGACCTGGATCATTCAGGCGCCACAGAGTCATTGTCAAACCATCATTTGTTAGAACATTATTATTTTTCTAATTTTCAGGGGGGAGGCAGGAATCCTTCTAGCTCTGGGGATTGGCTAAAACAGACCAATGGAAATCAACCACACCACACCAGACAAGGAAATTCAGGTGTGTGAATTGGAATATCAATCCCGTTAAAACTGATGGACAGAAGGGTATGATATGCAAATTCACAAATCACAGGAATGGATCTTTTGAAACCATTTAAAAATTATATATATATATGAGTATATCATTTATAAAATTCCTAAACTGCAAGAGTATAATTTATAACTATTTCTAATAATAAAAAAAGATAAGAGCAAAAGAAAGGGAAACCACAGGAGTATAATTCTCAATTTTACACTGTTCCCAAGAAACAAGAAATCAAGTTATACCTAACAAAACCAGATCTGATAATTTCAAGGAGGGAGTTTGGAGCCTTGTCATCTGAGTTCATCTTTATACTATGGAGGACAAGATGGCTACTCCCAGGCCCCATCAGCTGGACCATCCCCATCCCCACCCCCCACCGTGAGTATACTTTCTTGATCAATTTGGATCATTGTCAAAAATGTTTGTTCTCTGTTGTAACTTTTATGATTTCATCAGCCTGATCATAAACTGAAAGTAAAATTGATGGTTTTTCTTCTGTTGTTGCCAATTCATTGATGAACCAGATGAAGAAAAGTGGGGGAGAAGATGATCCAAATGGAAACAACTCTCAACCTGCTTCTAGGGAAAATTGGTGGCAAGGTACTAATAATGTAATGGACGAAGTTGTAGGAATCTGTTGA

mRNA sequence

ATGGAGGGAAAGTCTAAAGGGTATCAAGCCTCCTCTTTCGTTGCCGATCTTTTCGATGTCAAGGAGCCGCCATTGTCATCCGCATCAGGAGTCTTTGCAGCAATCTTTCCATCTCCACAGAAGGGGGGAGGCAGGAATCCTTCTAGCTCTGGGGATTGGCTAAAACAGACCAATGGAAATCAACCACACCACACCAGACAAGGAAATTCAGGAGGGAGTTTGGAGCCTTGTCATCTGAGTTCATCTTTATACTATGGAGGACAAGATGGCTACTCCCAGGCCCCATCAGCTGGACCATCCCCATCCCCACCCCCCACCATGAAGAAAAGTGGGGGAGAAGATGATCCAAATGGAAACAACTCTCAACCTGCTTCTAGGGAAAATTGGTGGCAAGGTACTAATAATGTAATGGACGAAGTTGTAGGAATCTGTTGA

Coding sequence (CDS)

ATGGAGGGAAAGTCTAAAGGGTATCAAGCCTCCTCTTTCGTTGCCGATCTTTTCGATGTCAAGGAGCCGCCATTGTCATCCGCATCAGGAGTCTTTGCAGCAATCTTTCCATCTCCACAGAAGGGGGGAGGCAGGAATCCTTCTAGCTCTGGGGATTGGCTAAAACAGACCAATGGAAATCAACCACACCACACCAGACAAGGAAATTCAGGAGGGAGTTTGGAGCCTTGTCATCTGAGTTCATCTTTATACTATGGAGGACAAGATGGCTACTCCCAGGCCCCATCAGCTGGACCATCCCCATCCCCACCCCCCACCATGAAGAAAAGTGGGGGAGAAGATGATCCAAATGGAAACAACTCTCAACCTGCTTCTAGGGAAAATTGGTGGCAAGGTACTAATAATGTAATGGACGAAGTTGTAGGAATCTGTTGA

Protein sequence

MEGKSKGYQASSFVADLFDVKEPPLSSASGVFAAIFPSPQKGGGRNPSSSGDWLKQTNGNQPHHTRQGNSGGSLEPCHLSSSLYYGGQDGYSQAPSAGPSPSPPPTMKKSGGEDDPNGNNSQPASRENWWQGTNNVMDEVVGIC

Homology

[Close]

BLAST of HG10021885 vs. NCBI nr
Match: XP_022970583.1 (uncharacterized protein LOC111469517 [Cucurbita maxima] >XP_023519303.1 uncharacterized protein LOC111782742 [Cucurbita pepo subsp. pepo] >XP_023519304.1 uncharacterized protein LOC111782742 [Cucurbita pepo subsp. pepo] >XP_023519305.1 uncharacterized protein LOC111782742 [Cucurbita pepo subsp. pepo] >XP_023521040.1 uncharacterized protein LOC111784637 [Cucurbita pepo subsp. pepo] >XP_023521041.1 uncharacterized protein LOC111784637 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 243.0 bits (619), Expect = 1.5e-60
Identity = 120/133 (90.23%), Postives = 124/133 (93.23%), Query Frame = 0


Query: 1   MEGKSKGYQASSFVADLFDVKEPPLSSASGVFAAIFPSPQKGGGRNPSSSGDWLKQTNGN 60
           MEGKSKGYQASSFVADLFDVKEPP +S+S VFAAIFPSPQKGGGRN SSSGDWLKQ NGN
Sbjct: 1   MEGKSKGYQASSFVADLFDVKEPPSTSSSEVFAAIFPSPQKGGGRNSSSSGDWLKQANGN 60

Query: 61  QPHHTRQGNSGGSLEPCHLSSSLYYGGQDGYSQAPSAGPSPSPPPTMKKSGGEDDPNGNN 120
           QP H RQGNSGGSLEPCHLSSSLYYGGQDGYSQAPSAGPSPSP PT+KKSGGEDDPNGNN
Sbjct: 61  QPSHARQGNSGGSLEPCHLSSSLYYGGQDGYSQAPSAGPSPSPAPTLKKSGGEDDPNGNN 120

Query: 121 SQPASRENWWQGT 134
            QPASR NWWQG+
Sbjct: 121 FQPASRGNWWQGS 133

[Close]

BLAST of HG10021885 vs. NCBI nr
Match: XP_038894691.1 (uncharacterized protein LOC120083160 [Benincasa hispida] >XP_038894692.1 uncharacterized protein LOC120083160 [Benincasa hispida] >XP_038894693.1 uncharacterized protein LOC120083160 [Benincasa hispida])

HSP 1 Score: 242.3 bits (617), Expect = 2.6e-60
Identity = 123/133 (92.48%), Postives = 124/133 (93.23%), Query Frame = 0


Query: 1   MEGKSKGYQASSFVADLFDVKEPPLSSASGVFAAIFPSPQKGGGRNPSSSGDWLKQTNGN 60
           MEGKSKGYQASSFVADLFDVKEPPLSS SGVFAAIF SPQKG GRN SSSGDWLKQTNGN
Sbjct: 1   MEGKSKGYQASSFVADLFDVKEPPLSSTSGVFAAIFSSPQKGRGRNSSSSGDWLKQTNGN 60

Query: 61  QPHHTRQGNSGGSLEPCHLSSSLYYGGQDGYSQAPSAGPSPSPPPTMKKSGGEDDPNGNN 120
           QP HTRQGNS GSLEPCHLSSSLYYGGQDGYSQAPSAGPSP  PPTMKKSGGEDDPNGNN
Sbjct: 61  QPRHTRQGNS-GSLEPCHLSSSLYYGGQDGYSQAPSAGPSPPSPPTMKKSGGEDDPNGNN 120

Query: 121 SQPASRENWWQGT 134
           SQPASR NWWQG+
Sbjct: 121 SQPASRGNWWQGS 132

[Close]

BLAST of HG10021885 vs. NCBI nr
Match: KAG6583402.1 (hypothetical protein SDJN03_19334, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 241.1 bits (614), Expect = 5.8e-60
Identity = 120/134 (89.55%), Postives = 124/134 (92.54%), Query Frame = 0


Query: 1   MEGKSKGYQASSFVADLFDVKEPPLSSASGVFAAIFPSPQKGGGRNPSSSGDWLKQTNGN 60
           MEGKSKGYQASSFVADLFDVKEPP +S+S VFAAIFPSPQKGGGRN SSSGDWLKQ NGN
Sbjct: 1   MEGKSKGYQASSFVADLFDVKEPPSTSSSEVFAAIFPSPQKGGGRNSSSSGDWLKQANGN 60

Query: 61  QPHHTRQGNSGGSLEPCHLSSSLYYGGQDGYSQAPSAGPSPSPPPTMKKSGGEDDPNGNN 120
           QP H RQGNSGGSLEPCHLSSSLYYGGQDGYSQAPSAG SPSP PT+KKSGGEDDPNGNN
Sbjct: 61  QPSHARQGNSGGSLEPCHLSSSLYYGGQDGYSQAPSAGLSPSPAPTLKKSGGEDDPNGNN 120

Query: 121 SQPASRENWWQGTN 135
            QPASR NWWQGT+
Sbjct: 121 FQPASRGNWWQGTD 134

[Close]

BLAST of HG10021885 vs. NCBI nr
Match: XP_022964980.1 (uncharacterized protein LOC111464929 [Cucurbita moschata] >XP_022964981.1 uncharacterized protein LOC111464929 [Cucurbita moschata] >XP_022964982.1 uncharacterized protein LOC111464929 [Cucurbita moschata])

HSP 1 Score: 239.2 bits (609), Expect = 2.2e-59
Identity = 119/133 (89.47%), Postives = 123/133 (92.48%), Query Frame = 0


Query: 1   MEGKSKGYQASSFVADLFDVKEPPLSSASGVFAAIFPSPQKGGGRNPSSSGDWLKQTNGN 60
           MEGKSKGYQASSFVADLFDVKEPP +S+S VFAAIFPSPQKGGGRN SSSGDWLKQ NGN
Sbjct: 1   MEGKSKGYQASSFVADLFDVKEPPSTSSSEVFAAIFPSPQKGGGRNSSSSGDWLKQANGN 60

Query: 61  QPHHTRQGNSGGSLEPCHLSSSLYYGGQDGYSQAPSAGPSPSPPPTMKKSGGEDDPNGNN 120
           QP H RQGNSGGSLEPCHLSSSLYYGGQDGYSQAPSAG SPSP PT+KKSGGEDDPNGNN
Sbjct: 61  QPSHARQGNSGGSLEPCHLSSSLYYGGQDGYSQAPSAGLSPSPAPTLKKSGGEDDPNGNN 120

Query: 121 SQPASRENWWQGT 134
            QPASR NWWQG+
Sbjct: 121 FQPASRGNWWQGS 133

[Close]

BLAST of HG10021885 vs. NCBI nr
Match: XP_008457434.1 (PREDICTED: uncharacterized protein LOC103497123 [Cucumis melo] >KAA0031766.1 uncharacterized protein E6C27_scaffold848G00050 [Cucumis melo var. makuwa] >TYJ97366.1 uncharacterized protein E5676_scaffold194G001770 [Cucumis melo var. makuwa])

HSP 1 Score: 238.0 bits (606), Expect = 4.9e-59
Identity = 122/136 (89.71%), Postives = 124/136 (91.18%), Query Frame = 0


Query: 1   MEGKSKGYQASSFVADLFDVKEPPLSSASGVFAAIFPSPQKGGGRNPSSSGDWLKQTNGN 60
           MEGKSKGYQ SSFVADLFDVKE PLSSASG FA IFPSPQKG GRN SSS DWLKQTNGN
Sbjct: 1   MEGKSKGYQTSSFVADLFDVKEAPLSSASGAFATIFPSPQKGAGRNSSSSVDWLKQTNGN 60

Query: 61  QPHHTRQGNSGGSLEPCHLSSSLYYGGQDGYSQAPSAGPSPSPPP--TMKKSGG-EDDPN 120
           QPHHTRQGNSGGSLEPCHLSSSLYYGGQDGYSQAPSAGPSP PPP  TMKKSGG +DDPN
Sbjct: 61  QPHHTRQGNSGGSLEPCHLSSSLYYGGQDGYSQAPSAGPSPLPPPPHTMKKSGGQQDDPN 120

Query: 121 GNNSQPASRENWWQGT 134
           GNNSQPASR NWWQG+
Sbjct: 121 GNNSQPASRGNWWQGS 136

[Close]

BLAST of HG10021885 vs. ExPASy TrEMBL
Match: A0A6J1I4B7 (uncharacterized protein LOC111469517 OS=Cucurbita maxima OX=3661 GN=LOC111469517 PE=4 SV=1)

HSP 1 Score: 243.0 bits (619), Expect = 7.4e-61
Identity = 120/133 (90.23%), Postives = 124/133 (93.23%), Query Frame = 0


Query: 1   MEGKSKGYQASSFVADLFDVKEPPLSSASGVFAAIFPSPQKGGGRNPSSSGDWLKQTNGN 60
           MEGKSKGYQASSFVADLFDVKEPP +S+S VFAAIFPSPQKGGGRN SSSGDWLKQ NGN
Sbjct: 1   MEGKSKGYQASSFVADLFDVKEPPSTSSSEVFAAIFPSPQKGGGRNSSSSGDWLKQANGN 60

Query: 61  QPHHTRQGNSGGSLEPCHLSSSLYYGGQDGYSQAPSAGPSPSPPPTMKKSGGEDDPNGNN 120
           QP H RQGNSGGSLEPCHLSSSLYYGGQDGYSQAPSAGPSPSP PT+KKSGGEDDPNGNN
Sbjct: 61  QPSHARQGNSGGSLEPCHLSSSLYYGGQDGYSQAPSAGPSPSPAPTLKKSGGEDDPNGNN 120

Query: 121 SQPASRENWWQGT 134
            QPASR NWWQG+
Sbjct: 121 FQPASRGNWWQGS 133

[Close]

BLAST of HG10021885 vs. ExPASy TrEMBL
Match: A0A6J1HJ44 (uncharacterized protein LOC111464929 OS=Cucurbita moschata OX=3662 GN=LOC111464929 PE=4 SV=1)

HSP 1 Score: 239.2 bits (609), Expect = 1.1e-59
Identity = 119/133 (89.47%), Postives = 123/133 (92.48%), Query Frame = 0


Query: 1   MEGKSKGYQASSFVADLFDVKEPPLSSASGVFAAIFPSPQKGGGRNPSSSGDWLKQTNGN 60
           MEGKSKGYQASSFVADLFDVKEPP +S+S VFAAIFPSPQKGGGRN SSSGDWLKQ NGN
Sbjct: 1   MEGKSKGYQASSFVADLFDVKEPPSTSSSEVFAAIFPSPQKGGGRNSSSSGDWLKQANGN 60

Query: 61  QPHHTRQGNSGGSLEPCHLSSSLYYGGQDGYSQAPSAGPSPSPPPTMKKSGGEDDPNGNN 120
           QP H RQGNSGGSLEPCHLSSSLYYGGQDGYSQAPSAG SPSP PT+KKSGGEDDPNGNN
Sbjct: 61  QPSHARQGNSGGSLEPCHLSSSLYYGGQDGYSQAPSAGLSPSPAPTLKKSGGEDDPNGNN 120

Query: 121 SQPASRENWWQGT 134
            QPASR NWWQG+
Sbjct: 121 FQPASRGNWWQGS 133

[Close]

BLAST of HG10021885 vs. ExPASy TrEMBL
Match: A0A5D3BEB7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold194G001770 PE=4 SV=1)

HSP 1 Score: 238.0 bits (606), Expect = 2.4e-59
Identity = 122/136 (89.71%), Postives = 124/136 (91.18%), Query Frame = 0


Query: 1   MEGKSKGYQASSFVADLFDVKEPPLSSASGVFAAIFPSPQKGGGRNPSSSGDWLKQTNGN 60
           MEGKSKGYQ SSFVADLFDVKE PLSSASG FA IFPSPQKG GRN SSS DWLKQTNGN
Sbjct: 1   MEGKSKGYQTSSFVADLFDVKEAPLSSASGAFATIFPSPQKGAGRNSSSSVDWLKQTNGN 60

Query: 61  QPHHTRQGNSGGSLEPCHLSSSLYYGGQDGYSQAPSAGPSPSPPP--TMKKSGG-EDDPN 120
           QPHHTRQGNSGGSLEPCHLSSSLYYGGQDGYSQAPSAGPSP PPP  TMKKSGG +DDPN
Sbjct: 61  QPHHTRQGNSGGSLEPCHLSSSLYYGGQDGYSQAPSAGPSPLPPPPHTMKKSGGQQDDPN 120

Query: 121 GNNSQPASRENWWQGT 134
           GNNSQPASR NWWQG+
Sbjct: 121 GNNSQPASRGNWWQGS 136

[Close]

BLAST of HG10021885 vs. ExPASy TrEMBL
Match: A0A1S3C5M6 (uncharacterized protein LOC103497123 OS=Cucumis melo OX=3656 GN=LOC103497123 PE=4 SV=1)

HSP 1 Score: 238.0 bits (606), Expect = 2.4e-59
Identity = 122/136 (89.71%), Postives = 124/136 (91.18%), Query Frame = 0


Query: 1   MEGKSKGYQASSFVADLFDVKEPPLSSASGVFAAIFPSPQKGGGRNPSSSGDWLKQTNGN 60
           MEGKSKGYQ SSFVADLFDVKE PLSSASG FA IFPSPQKG GRN SSS DWLKQTNGN
Sbjct: 1   MEGKSKGYQTSSFVADLFDVKEAPLSSASGAFATIFPSPQKGAGRNSSSSVDWLKQTNGN 60

Query: 61  QPHHTRQGNSGGSLEPCHLSSSLYYGGQDGYSQAPSAGPSPSPPP--TMKKSGG-EDDPN 120
           QPHHTRQGNSGGSLEPCHLSSSLYYGGQDGYSQAPSAGPSP PPP  TMKKSGG +DDPN
Sbjct: 61  QPHHTRQGNSGGSLEPCHLSSSLYYGGQDGYSQAPSAGPSPLPPPPHTMKKSGGQQDDPN 120

Query: 121 GNNSQPASRENWWQGT 134
           GNNSQPASR NWWQG+
Sbjct: 121 GNNSQPASRGNWWQGS 136

[Close]

BLAST of HG10021885 vs. ExPASy TrEMBL
Match: A0A0A0LXG9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G525300 PE=4 SV=1)

HSP 1 Score: 234.6 bits (597), Expect = 2.6e-58
Identity = 121/136 (88.97%), Postives = 124/136 (91.18%), Query Frame = 0


Query: 1   MEGKSKGYQASSFVADLFDVKEPPLSSASGVFAAIFPSPQKGGGRNPSSSGDWLKQTNGN 60
           MEGKSKGYQASSFVADLFDVKE PLSSASG FA IFPSPQKG GRN SSS DWLKQTNG+
Sbjct: 1   MEGKSKGYQASSFVADLFDVKEAPLSSASGAFATIFPSPQKGAGRNSSSSVDWLKQTNGS 60

Query: 61  QPHHTRQGNSGGSLEPCHLSSSLYYGGQDGYSQAPSAGPSPSPPP--TMKKSGG-EDDPN 120
           QPHHTRQGNSGGSLEPCHLSSSLYYGGQDGYSQA SAGPSP PPP  TMKKSGG +DDPN
Sbjct: 61  QPHHTRQGNSGGSLEPCHLSSSLYYGGQDGYSQATSAGPSPLPPPPHTMKKSGGQQDDPN 120

Query: 121 GNNSQPASRENWWQGT 134
           GNNSQPASR NWWQG+
Sbjct: 121 GNNSQPASRGNWWQGS 136

[Close]

BLAST of HG10021885 vs. TAIR 10
Match: AT5G59080.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to oxidative stress; LOCATED IN: chloroplast; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 9 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G46880.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 94.7 bits (234), Expect = 6.3e-20
Identity = 63/139 (45.32%), Postives = 83/139 (59.71%), Query Frame = 0


Query: 1   MEGK----SKGYQASSFVADLFDVKEP-PLSSASGVFAAIFPSPQKGGGRNPSSSGDWLK 60
           MEGK    S    +SSF A+LF  K+P P SS+SG+F+ +FP P KG  R+ S+S     
Sbjct: 1   MEGKGRVGSSSSTSSSFTAELFGSKDPSPPSSSSGIFSTMFPHPSKGSARDGSNS----- 60

Query: 61  QTNGNQPHHTRQGNS-GGSLEPCHLSSSLYYGGQDGYSQAPSAGPSPSPPPTMKKSGGED 120
             +G+Q       N+    +EPCHLSSSLYYGGQD Y+++ +    P P    ++  GED
Sbjct: 61  -KHGSQAQRRESLNAQEDRVEPCHLSSSLYYGGQDVYARSTTNQTYP-PVKNDRRRSGED 120

Query: 121 DPNGNNSQPASRENWWQGT 134
           D NG N Q  SR NWWQG+
Sbjct: 121 DANGQNPQDVSRGNWWQGS 132

[Close]

BLAST of HG10021885 vs. TAIR 10
Match: AT5G02020.1 (Encodes a protein involved in salt tolerance, names SIS (Salt Induced Serine rich). )

HSP 1 Score: 74.7 bits (182), Expect = 6.7e-14
Identity = 63/155 (40.65%), Postives = 79/155 (50.97%), Query Frame = 0


Query: 1   MEGKSK------GYQASSFVADLFDVKEPPLS-SASGVFAAIFPSPQKGGGR-----NPS 60
           MEG+ K         +SS  ++LF  +E P S S+SG+  +IFP P K  GR        
Sbjct: 1   MEGRKKKASSSSPCSSSSLTSELFGSRENPSSPSSSGILGSIFPPPSKVLGRESVRQETV 60

Query: 61  SSGDW---LKQTNGNQPHHTRQGNSGGS-------LEPCHLSSSLYYGGQDGYSQAPSAG 120
           + G W     +T GN   +  Q  + GS       ++PCHLSSS+YYGG D Y Q P   
Sbjct: 61  TGGCWNEKTSKTGGNVDRNREQQENHGSGYQQDQRVQPCHLSSSIYYGGPDVYFQ-PQNS 120

Query: 121 PSPSPPPTMKKSGGEDDPNGNNSQPASRENWWQGT 134
            S S   T KK GGEDD     S  ASR NWWQG+
Sbjct: 121 TSNS---TNKKDGGEDD-----SGSASRGNWWQGS 146

[Close]

BLAST of HG10021885 vs. TAIR 10
Match: AT5G02020.2 (Encodes a protein involved in salt tolerance, names SIS (Salt Induced Serine rich). )

HSP 1 Score: 55.1 bits (131), Expect = 5.5e-08
Identity = 43/115 (37.39%), Postives = 58/115 (50.43%), Query Frame = 0


Query: 1   MEGKSK------GYQASSFVADLFDVKEPPLS-SASGVFAAIFPSPQKGGGR-----NPS 60
           MEG+ K         +SS  ++LF  +E P S S+SG+  +IFP P K  GR        
Sbjct: 1   MEGRKKKASSSSPCSSSSLTSELFGSRENPSSPSSSGILGSIFPPPSKVLGRESVRQETV 60

Query: 61  SSGDW---LKQTNGNQPHHTRQGNSGGS-------LEPCHLSSSLYYGGQDGYSQ 94
           + G W     +T GN   +  Q  + GS       ++PCHLSSS+YYGG D Y Q
Sbjct: 61  TGGCWNEKTSKTGGNVDRNREQQENHGSGYQQDQRVQPCHLSSSIYYGGPDVYFQ 115

[Close]

BLAST of HG10021885 vs. TAIR 10
Match: AT2G39855.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G55646.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 53.9 bits (128), Expect = 1.2e-07
Identity = 44/121 (36.36%), Postives = 56/121 (46.28%), Query Frame = 0


Query: 26  SSASGVFAAIFPSPQKGGGRNPSSSGDWLKQTNGNQPHHTRQGNSGGSLE---------- 85
           SS +G+F +IFP P      N +S     K    N      +G    + E          
Sbjct: 32  SSTTGLFKSIFPPPSAVTQGNLTSRNGAAKYQPTNFETPNERGERSKNKERKSYQSEETQ 91

Query: 86  -PCHLSSSLYYGGQDGYSQAPSAGPSPSPPPTMKKSGGEDDPNGNNSQPASRENWWQGTN 136
            PC+LSSS+YYGGQD YS       S + P   KK G E D     S+ ASR NWW+G+ 
Sbjct: 92  PPCNLSSSIYYGGQDNYSS------STTNPDAYKKDGEEGD-----SESASRGNWWEGSF 141

[Close]

BLAST of HG10021885 vs. TAIR 10
Match: AT3G55646.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G39855.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 53.9 bits (128), Expect = 1.2e-07
Identity = 55/149 (36.91%), Postives = 75/149 (50.34%), Query Frame = 0


Query: 2   EGKSKGYQASSFVADL--FD------VKEPPLSSASGVFAAIFPSP---QKGGGRNPSSS 61
           + K K   ASS  + L  FD      V     SSA+G+F +IFP P   Q G   + +S 
Sbjct: 5   KNKKKIVSASSSSSSLSSFDHIFGPRVSSSSSSSATGLFKSIFPPPSADQLGRQVDFASQ 64

Query: 62  GDWLKQTNGN---QPHHTRQGNSGGSLE---PCHLSSSLYYGGQDGYSQAPSAGPSPSPP 121
           G  +K  + N   +  + ++  S  + E   PCHLSSSLYYGGQ+ YS       + +  
Sbjct: 65  GGHVKYQSPNAKGERSNKKEKKSYYNEETEPPCHLSSSLYYGGQETYSST-----TTTTH 124

Query: 122 PTMKKSGGEDDPNGNNSQPASRENWWQGT 134
            T KK G E D     S+ ASR NWW+G+
Sbjct: 125 DTYKKDGEEGD-----SKRASRGNWWEGS 143

The following BLAST results are available for this feature:

BLAST of HG10021885 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022970583.1	1.5e-60	90.23	uncharacterized protein LOC111469517 [Cucurbita maxima] >XP_023519303.1 uncharac...	[more]
XP_038894691.1	2.6e-60	92.48	uncharacterized protein LOC120083160 [Benincasa hispida] >XP_038894692.1 unchara...	[more]
KAG6583402.1	5.8e-60	89.55	hypothetical protein SDJN03_19334, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022964980.1	2.2e-59	89.47	uncharacterized protein LOC111464929 [Cucurbita moschata] >XP_022964981.1 unchar...	[more]
XP_008457434.1	4.9e-59	89.71	PREDICTED: uncharacterized protein LOC103497123 [Cucumis melo] >KAA0031766.1 unc...	[more]

BLAST of HG10021885 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of HG10021885 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1I4B7	7.4e-61	90.23	uncharacterized protein LOC111469517 OS=Cucurbita maxima OX=3661 GN=LOC111469517...	[more]
A0A6J1HJ44	1.1e-59	89.47	uncharacterized protein LOC111464929 OS=Cucurbita moschata OX=3662 GN=LOC1114649...	[more]
A0A5D3BEB7	2.4e-59	89.71	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3C5M6	2.4e-59	89.71	uncharacterized protein LOC103497123 OS=Cucumis melo OX=3656 GN=LOC103497123 PE=...	[more]
A0A0A0LXG9	2.6e-58	88.97	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G525300 PE=4 SV=1	[more]

BLAST of HG10021885 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G59080.1	6.3e-20	45.32	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response...	[more]
AT5G02020.1	6.7e-14	40.65	Encodes a protein involved in salt tolerance, names SIS (Salt Induced Serine ric...	[more]
AT5G02020.2	5.5e-08	37.39	Encodes a protein involved in salt tolerance, names SIS (Salt Induced Serine ric...	[more]
AT2G39855.2	1.2e-07	36.36	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT3G55646.1	1.2e-07	36.91	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 113..135
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 35..144
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 42..77
None	No IPR available	PANTHER	PTHR33738	EMB\|CAB82975.1	coord: 1..133

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10021885.1	HG10021885.1	mRNA