HG10021872 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10021872
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	18.5 kDa class I heat shock protein-like
Location	Chr05: 17796218 .. 17796700 (-)
RNA-Seq Expression	HG10021872
Synteny	HG10021872

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCGATGATTCCAAGCTTTTTCGGTGGTCGACGGACCAGTGTCTTCGATCCCTTTGCCACATTCGACCTCTCAGATCCATTCGATTTTCACTTTCCTTCTTCAATTTCATCTCACTTTCCTGAAATTGCTCGAGAAACTTCAGCTATAGTGAACGCTCGTGTAGATTGGAAGGAGACGCCGGAGGCTCATGTTCTTAAAGCCGATCTGCCTGGATTGAAGAAAGAGGAAGTGAAAGTGGAGATTGAAGATGGAAAAGTGATTCAGATGAGCGGCGAACGGAACGTAGAGAAAGAGGATAAGAACGAGAAATGGCATCGGATCGAGCGAAGCAGTGGAAAGTTTCAGAGGAGATTCAGGATGCCGGAGGATGCGAAAATGGAGGAAATTAGGGCATCAATGGAGAACGGAGTTTTAACCGTGACGGTGCCGAAGGCGGAAAAAACGAAAACGGATGTAAAGTCCGTTGATGTTTCCGGCTGA

mRNA sequence

ATGTCGATGATTCCAAGCTTTTTCGGTGGTCGACGGACCAGTGTCTTCGATCCCTTTGCCACATTCGACCTCTCAGATCCATTCGATTTTCACTTTCCTTCTTCAATTTCATCTCACTTTCCTGAAATTGCTCGAGAAACTTCAGCTATAGTGAACGCTCGTGTAGATTGGAAGGAGACGCCGGAGGCTCATGTTCTTAAAGCCGATCTGCCTGGATTGAAGAAAGAGGAAGTGAAAGTGGAGATTGAAGATGGAAAAGTGATTCAGATGAGCGGCGAACGGAACGTAGAGAAAGAGGATAAGAACGAGAAATGGCATCGGATCGAGCGAAGCAGTGGAAAGTTTCAGAGGAGATTCAGGATGCCGGAGGATGCGAAAATGGAGGAAATTAGGGCATCAATGGAGAACGGAGTTTTAACCGTGACGGTGCCGAAGGCGGAAAAAACGAAAACGGATGTAAAGTCCGTTGATGTTTCCGGCTGA

Coding sequence (CDS)

ATGTCGATGATTCCAAGCTTTTTCGGTGGTCGACGGACCAGTGTCTTCGATCCCTTTGCCACATTCGACCTCTCAGATCCATTCGATTTTCACTTTCCTTCTTCAATTTCATCTCACTTTCCTGAAATTGCTCGAGAAACTTCAGCTATAGTGAACGCTCGTGTAGATTGGAAGGAGACGCCGGAGGCTCATGTTCTTAAAGCCGATCTGCCTGGATTGAAGAAAGAGGAAGTGAAAGTGGAGATTGAAGATGGAAAAGTGATTCAGATGAGCGGCGAACGGAACGTAGAGAAAGAGGATAAGAACGAGAAATGGCATCGGATCGAGCGAAGCAGTGGAAAGTTTCAGAGGAGATTCAGGATGCCGGAGGATGCGAAAATGGAGGAAATTAGGGCATCAATGGAGAACGGAGTTTTAACCGTGACGGTGCCGAAGGCGGAAAAAACGAAAACGGATGTAAAGTCCGTTGATGTTTCCGGCTGA

Protein sequence

MSMIPSFFGGRRTSVFDPFATFDLSDPFDFHFPSSISSHFPEIARETSAIVNARVDWKETPEAHVLKADLPGLKKEEVKVEIEDGKVIQMSGERNVEKEDKNEKWHRIERSSGKFQRRFRMPEDAKMEEIRASMENGVLTVTVPKAEKTKTDVKSVDVSG

Homology

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BLAST of HG10021872 vs. NCBI nr
Match: ADU55790.1 (HSP18.2A [Citrullus lanatus])

HSP 1 Score: 297.0 bits (759), Expect = 9.9e-77
Identity = 148/160 (92.50%), Postives = 159/160 (99.38%), Query Frame = 0


Query: 1   MSMIPSFFGGRRTSVFDPFATFDLSDPFDFHFPSSISSHFPEIARETSAIVNARVDWKET 60
           MSMIPSFFGGRR+SVFDPFATFDLSDPFDFHFPSSISSHFPEIARETSA+VNARVDWKET
Sbjct: 1   MSMIPSFFGGRRSSVFDPFATFDLSDPFDFHFPSSISSHFPEIARETSAMVNARVDWKET 60

Query: 61  PEAHVLKADLPGLKKEEVKVEIEDGKVIQMSGERNVEKEDKNEKWHRIERSSGKFQRRFR 120
           PEAHVLKADLPGLKKEEVKVE+EDGKVIQ+SGER++EKEDKNEKWHRIERSSGKFQRRFR
Sbjct: 61  PEAHVLKADLPGLKKEEVKVEVEDGKVIQISGERSIEKEDKNEKWHRIERSSGKFQRRFR 120

Query: 121 MPEDAKMEEIRASMENGVLTVTVPKAEKTKTDVKSVDVSG 161
           +PEDAKMEEIRASMENGVLTVTVPKAE+ KTDVK+V++SG
Sbjct: 121 LPEDAKMEEIRASMENGVLTVTVPKAEQKKTDVKTVEISG 160

[Close]

BLAST of HG10021872 vs. NCBI nr
Match: XP_008457419.1 (PREDICTED: 18.5 kDa class I heat shock protein-like [Cucumis melo] >KAA0031778.1 18.5 kDa class I heat shock protein-like [Cucumis melo var. makuwa] >TYJ97354.1 18.5 kDa class I heat shock protein-like [Cucumis melo var. makuwa])

HSP 1 Score: 295.8 bits (756), Expect = 2.2e-76
Identity = 151/160 (94.38%), Postives = 156/160 (97.50%), Query Frame = 0


Query: 1   MSMIPSFFGGRRTSVFDPFATFDLSDPFDFHFPSSISSHFPEIARETSAIVNARVDWKET 60
           MSMIPSFF GR++SVFDPFATFDLSDPFDFHFPSSISSHFPEIARETSAIVNARVDWKET
Sbjct: 1   MSMIPSFFNGRQSSVFDPFATFDLSDPFDFHFPSSISSHFPEIARETSAIVNARVDWKET 60

Query: 61  PEAHVLKADLPGLKKEEVKVEIEDGKVIQMSGERNVEKEDKNEKWHRIERSSGKFQRRFR 120
           PEAHVLKADLPGLKKEEVKVEIEDGKVIQ+SGERNVEKEDKNEKWHRIERSSGKFQRRFR
Sbjct: 61  PEAHVLKADLPGLKKEEVKVEIEDGKVIQISGERNVEKEDKNEKWHRIERSSGKFQRRFR 120

Query: 121 MPEDAKMEEIRASMENGVLTVTVPKAEKTKTDVKSVDVSG 161
           MPEDAK EEIRASMENGVLTVTVPKAE  KTDVKSV++SG
Sbjct: 121 MPEDAKTEEIRASMENGVLTVTVPKAEGKKTDVKSVEISG 160

[Close]

BLAST of HG10021872 vs. NCBI nr
Match: XP_008457420.1 (PREDICTED: 18.5 kDa class I heat shock protein-like [Cucumis melo] >KAA0031777.1 18.5 kDa class I heat shock protein-like [Cucumis melo var. makuwa] >TYJ97355.1 18.5 kDa class I heat shock protein-like [Cucumis melo var. makuwa])

HSP 1 Score: 295.0 bits (754), Expect = 3.8e-76
Identity = 149/160 (93.12%), Postives = 157/160 (98.12%), Query Frame = 0


Query: 1   MSMIPSFFGGRRTSVFDPFATFDLSDPFDFHFPSSISSHFPEIARETSAIVNARVDWKET 60
           MSMIPSFFGGRR+SVFDPFATFDLSDPFDFHFPSSISSHFPEIARETSAIVNARVDWKET
Sbjct: 1   MSMIPSFFGGRRSSVFDPFATFDLSDPFDFHFPSSISSHFPEIARETSAIVNARVDWKET 60

Query: 61  PEAHVLKADLPGLKKEEVKVEIEDGKVIQMSGERNVEKEDKNEKWHRIERSSGKFQRRFR 120
           PEAHVLKADLPGLKKEEVKVEIEDGKVIQ+SGER+VEKEDKNEKWHR+ERSSGKF+RRFR
Sbjct: 61  PEAHVLKADLPGLKKEEVKVEIEDGKVIQISGERSVEKEDKNEKWHRMERSSGKFKRRFR 120

Query: 121 MPEDAKMEEIRASMENGVLTVTVPKAEKTKTDVKSVDVSG 161
           MPED KMEEIRASMENGVLTVTVPKAE+ K DVKSV++SG
Sbjct: 121 MPEDVKMEEIRASMENGVLTVTVPKAEEKKADVKSVEISG 160

[Close]

BLAST of HG10021872 vs. NCBI nr
Match: XP_038894963.1 (18.5 kDa class I heat shock protein-like [Benincasa hispida])

HSP 1 Score: 293.1 bits (749), Expect = 1.4e-75
Identity = 150/160 (93.75%), Postives = 156/160 (97.50%), Query Frame = 0


Query: 1   MSMIPSFFGGRRTSVFDPFATFDLSDPFDFHFPSSISSHFPEIARETSAIVNARVDWKET 60
           MSMIPSFFGGRR+SVFDPFATFDLSDPFDFHFPSSISSHFPEIARETSA+VNARVDWKET
Sbjct: 1   MSMIPSFFGGRRSSVFDPFATFDLSDPFDFHFPSSISSHFPEIARETSAMVNARVDWKET 60

Query: 61  PEAHVLKADLPGLKKEEVKVEIEDGKVIQMSGERNVEKEDKNEKWHRIERSSGKFQRRFR 120
           PEAHVLKADLPGLKKEEVKVEIEDGKVIQ+SGER+VEKEDKNE WHRIERSSGKFQRRFR
Sbjct: 61  PEAHVLKADLPGLKKEEVKVEIEDGKVIQISGERSVEKEDKNETWHRIERSSGKFQRRFR 120

Query: 121 MPEDAKMEEIRASMENGVLTVTVPKAEKTKTDVKSVDVSG 161
           MPEDAKMEEIRASMENGVLTVTVPKAE  KT VKSV++SG
Sbjct: 121 MPEDAKMEEIRASMENGVLTVTVPKAEGKKTVVKSVEISG 160

[Close]

BLAST of HG10021872 vs. NCBI nr
Match: XP_023519957.1 (18.5 kDa class I heat shock protein-like [Cucurbita pepo subsp. pepo] >XP_023522391.1 18.5 kDa class I heat shock protein-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 290.0 bits (741), Expect = 1.2e-74
Identity = 145/160 (90.62%), Postives = 156/160 (97.50%), Query Frame = 0


Query: 1   MSMIPSFFGGRRTSVFDPFATFDLSDPFDFHFPSSISSHFPEIARETSAIVNARVDWKET 60
           MSMIPSFFGGRR+S+FDPFATFDLSDPFDFHFPSS+SSHFPEIARETSA+VNARVDWKET
Sbjct: 1   MSMIPSFFGGRRSSIFDPFATFDLSDPFDFHFPSSLSSHFPEIARETSAMVNARVDWKET 60

Query: 61  PEAHVLKADLPGLKKEEVKVEIEDGKVIQMSGERNVEKEDKNEKWHRIERSSGKFQRRFR 120
           PEAHVLKADLPGLKKEEVKVEIEDGKVIQ+SGER VEKE+KNEKWHR+ERSSG FQRRFR
Sbjct: 61  PEAHVLKADLPGLKKEEVKVEIEDGKVIQISGERRVEKEEKNEKWHRMERSSGMFQRRFR 120

Query: 121 MPEDAKMEEIRASMENGVLTVTVPKAEKTKTDVKSVDVSG 161
           +PEDAKMEEIRASMENGVLTVTVPKAE+ K DVKSV++SG
Sbjct: 121 LPEDAKMEEIRASMENGVLTVTVPKAEERKMDVKSVEISG 160

[Close]

BLAST of HG10021872 vs. ExPASy Swiss-Prot
Match: P05478 (18.5 kDa class I heat shock protein OS=Glycine max OX=3847 GN=HSP18.5-C PE=3 SV=1)

HSP 1 Score: 229.2 bits (583), Expect = 3.3e-59
Identity = 116/162 (71.60%), Postives = 142/162 (87.65%), Query Frame = 0


Query: 1   MSMIPSFFGGRRTSVFDPFATFDLSDPF-DFHFPSSISS-HFPEIARETSAIVNARVDWK 60
           MS+IP+FFGGRR +VFDPF + D+ DPF DF FP+++SS  FPE +RE SA V+ RVDWK
Sbjct: 1   MSLIPNFFGGRRNNVFDPF-SLDVWDPFKDFPFPNTLSSASFPEFSRENSAFVSTRVDWK 60

Query: 61  ETPEAHVLKADLPGLKKEEVKVEIEDGKVIQMSGERNVEKEDKNEKWHRIERSSGKFQRR 120
           ETPEAHV KAD+PGLKKEEVKV+IED KV+Q+SGERNVEKEDKN+ WHR+ERSSGKF RR
Sbjct: 61  ETPEAHVFKADIPGLKKEEVKVQIEDDKVLQISGERNVEKEDKNDTWHRVERSSGKFMRR 120

Query: 121 FRMPEDAKMEEIRASMENGVLTVTVPKAEKTKTDVKSVDVSG 161
           FR+PE+AK+E+++ASMENGVLTVTVPK E  K DVK++++SG
Sbjct: 121 FRLPENAKVEQVKASMENGVLTVTVPKEEVKKPDVKAIEISG 161

[Close]

BLAST of HG10021872 vs. ExPASy Swiss-Prot
Match: P02519 (17.3 kDa class I heat shock protein OS=Glycine max OX=3847 GN=HSP17.3-B PE=3 SV=1)

HSP 1 Score: 219.2 bits (557), Expect = 3.5e-56
Identity = 113/161 (70.19%), Postives = 138/161 (85.71%), Query Frame = 0


Query: 1   MSMIPSFFGGRRTSVFDPFATFDLSDPF-DFHFPSSISSHFPEIARETSAIVNARVDWKE 60
           MS+IPSFFGGRR+SVFDPF + D+ DPF DF FPSS+S+       E SA V+ RVDWKE
Sbjct: 1   MSLIPSFFGGRRSSVFDPF-SLDVWDPFKDFPFPSSLSA-------ENSAFVSTRVDWKE 60

Query: 61  TPEAHVLKADLPGLKKEEVKVEIEDGKVIQMSGERNVEKEDKNEKWHRIERSSGKFQRRF 120
           TPEAHV KAD+PGLKKEEVK+EI+DG+V+Q+SGERNVEKEDKN+ WHR+ERSSGK  RRF
Sbjct: 61  TPEAHVFKADIPGLKKEEVKLEIQDGRVLQISGERNVEKEDKNDTWHRVERSSGKLVRRF 120

Query: 121 RMPEDAKMEEIRASMENGVLTVTVPKAEKTKTDVKSVDVSG 161
           R+PE+AK+++++ASMENGVLTVTVPK E  K DVK++D+SG
Sbjct: 121 RLPENAKVDQVKASMENGVLTVTVPKEEIKKPDVKAIDISG 153

[Close]

BLAST of HG10021872 vs. ExPASy Swiss-Prot
Match: P27880 (18.2 kDa class I heat shock protein OS=Medicago sativa OX=3879 GN=HSP18.2 PE=2 SV=1)

HSP 1 Score: 217.2 bits (552), Expect = 1.3e-55
Identity = 113/162 (69.75%), Postives = 141/162 (87.04%), Query Frame = 0


Query: 1   MSMIPSFFGGRRTSVFDPFATFDLSDPF-DFHF-PSSISSHFPEIARETSAIVNARVDWK 60
           MS+IPSFFGGRR++VFDPF + D+ DPF DF F  S++S+ FP   RE SA V+ RVDWK
Sbjct: 1   MSLIPSFFGGRRSNVFDPF-SLDVWDPFKDFPFNNSALSASFP---RENSAFVSTRVDWK 60

Query: 61  ETPEAHVLKADLPGLKKEEVKVEIEDGKVIQMSGERNVEKEDKNEKWHRIERSSGKFQRR 120
           ETPEAHV KADLPG+KKEEVKVEIED +V+Q+SGER+VEKEDKN++WHR+ERSSGKF RR
Sbjct: 61  ETPEAHVFKADLPGMKKEEVKVEIEDDRVLQISGERSVEKEDKNDQWHRLERSSGKFMRR 120

Query: 121 FRMPEDAKMEEIRASMENGVLTVTVPKAEKTKTDVKSVDVSG 161
           FR+PE+AKM++++A+MENGVLTVTVPK E  K +VK++D+SG
Sbjct: 121 FRLPENAKMDQVKAAMENGVLTVTVPKEEVKKPEVKTIDISG 158

[Close]

BLAST of HG10021872 vs. ExPASy Swiss-Prot
Match: P04793 (17.5 kDa class I heat shock protein OS=Glycine max OX=3847 GN=HSP17.5-M PE=3 SV=1)

HSP 1 Score: 217.2 bits (552), Expect = 1.3e-55
Identity = 110/161 (68.32%), Postives = 137/161 (85.09%), Query Frame = 0


Query: 1   MSMIPSFFGGRRTSVFDPFATFDLSDPF-DFHFPSSISSHFPEIARETSAIVNARVDWKE 60
           MS+IPS FGGRR++VFDPF + D+ DPF DFHFP+S+S+       E SA VN RVDWKE
Sbjct: 1   MSLIPSIFGGRRSNVFDPF-SLDVWDPFKDFHFPTSLSA-------ENSAFVNTRVDWKE 60

Query: 61  TPEAHVLKADLPGLKKEEVKVEIEDGKVIQMSGERNVEKEDKNEKWHRIERSSGKFQRRF 120
           TPEAHV +AD+PGLKKEEVKV+IED +V+Q+SGERN+EKEDKN+ WHR+ERSSG F RRF
Sbjct: 61  TPEAHVFEADIPGLKKEEVKVQIEDDRVLQISGERNLEKEDKNDTWHRVERSSGNFMRRF 120

Query: 121 RMPEDAKMEEIRASMENGVLTVTVPKAEKTKTDVKSVDVSG 161
           R+PE+AK+E+++ASMENGVLTVTVPK E  K DVK++++SG
Sbjct: 121 RLPENAKVEQVKASMENGVLTVTVPKEEVKKPDVKAIEISG 153

[Close]

BLAST of HG10021872 vs. ExPASy Swiss-Prot
Match: P04794 (17.5 kDa class I heat shock protein OS=Glycine max OX=3847 GN=HSP17.5-E PE=3 SV=1)

HSP 1 Score: 216.1 bits (549), Expect = 2.9e-55
Identity = 110/161 (68.32%), Postives = 135/161 (83.85%), Query Frame = 0


Query: 1   MSMIPSFFGGRRTSVFDPFATFDLSDPF-DFHFPSSISSHFPEIARETSAIVNARVDWKE 60
           MS+IP FFGGRR++VFDPF + D+ DPF DFH P+S       ++ E SA V+ RVDWKE
Sbjct: 1   MSLIPGFFGGRRSNVFDPF-SLDMWDPFKDFHVPTS------SVSAENSAFVSTRVDWKE 60

Query: 61  TPEAHVLKADLPGLKKEEVKVEIEDGKVIQMSGERNVEKEDKNEKWHRIERSSGKFQRRF 120
           TPEAHV KAD+PGLKKEEVKV+IED +V+Q+SGERNVEKEDKN+ WHR+ERSSGKF RRF
Sbjct: 61  TPEAHVFKADIPGLKKEEVKVQIEDDRVLQISGERNVEKEDKNDTWHRVERSSGKFTRRF 120

Query: 121 RMPEDAKMEEIRASMENGVLTVTVPKAEKTKTDVKSVDVSG 161
           R+PE+AK+ E++ASMENGVLTVTVPK E  K DVK++++SG
Sbjct: 121 RLPENAKVNEVKASMENGVLTVTVPKEEVKKPDVKAIEISG 154

[Close]

BLAST of HG10021872 vs. ExPASy TrEMBL
Match: H6TB43 (HSP18.2A OS=Citrullus lanatus OX=3654 PE=2 SV=1)

HSP 1 Score: 297.0 bits (759), Expect = 4.8e-77
Identity = 148/160 (92.50%), Postives = 159/160 (99.38%), Query Frame = 0


Query: 1   MSMIPSFFGGRRTSVFDPFATFDLSDPFDFHFPSSISSHFPEIARETSAIVNARVDWKET 60
           MSMIPSFFGGRR+SVFDPFATFDLSDPFDFHFPSSISSHFPEIARETSA+VNARVDWKET
Sbjct: 1   MSMIPSFFGGRRSSVFDPFATFDLSDPFDFHFPSSISSHFPEIARETSAMVNARVDWKET 60

Query: 61  PEAHVLKADLPGLKKEEVKVEIEDGKVIQMSGERNVEKEDKNEKWHRIERSSGKFQRRFR 120
           PEAHVLKADLPGLKKEEVKVE+EDGKVIQ+SGER++EKEDKNEKWHRIERSSGKFQRRFR
Sbjct: 61  PEAHVLKADLPGLKKEEVKVEVEDGKVIQISGERSIEKEDKNEKWHRIERSSGKFQRRFR 120

Query: 121 MPEDAKMEEIRASMENGVLTVTVPKAEKTKTDVKSVDVSG 161
           +PEDAKMEEIRASMENGVLTVTVPKAE+ KTDVK+V++SG
Sbjct: 121 LPEDAKMEEIRASMENGVLTVTVPKAEQKKTDVKTVEISG 160

[Close]

BLAST of HG10021872 vs. ExPASy TrEMBL
Match: A0A5D3BEA2 (18.5 kDa class I heat shock protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold194G001640 PE=3 SV=1)

HSP 1 Score: 295.8 bits (756), Expect = 1.1e-76
Identity = 151/160 (94.38%), Postives = 156/160 (97.50%), Query Frame = 0


Query: 1   MSMIPSFFGGRRTSVFDPFATFDLSDPFDFHFPSSISSHFPEIARETSAIVNARVDWKET 60
           MSMIPSFF GR++SVFDPFATFDLSDPFDFHFPSSISSHFPEIARETSAIVNARVDWKET
Sbjct: 1   MSMIPSFFNGRQSSVFDPFATFDLSDPFDFHFPSSISSHFPEIARETSAIVNARVDWKET 60

Query: 61  PEAHVLKADLPGLKKEEVKVEIEDGKVIQMSGERNVEKEDKNEKWHRIERSSGKFQRRFR 120
           PEAHVLKADLPGLKKEEVKVEIEDGKVIQ+SGERNVEKEDKNEKWHRIERSSGKFQRRFR
Sbjct: 61  PEAHVLKADLPGLKKEEVKVEIEDGKVIQISGERNVEKEDKNEKWHRIERSSGKFQRRFR 120

Query: 121 MPEDAKMEEIRASMENGVLTVTVPKAEKTKTDVKSVDVSG 161
           MPEDAK EEIRASMENGVLTVTVPKAE  KTDVKSV++SG
Sbjct: 121 MPEDAKTEEIRASMENGVLTVTVPKAEGKKTDVKSVEISG 160

[Close]

BLAST of HG10021872 vs. ExPASy TrEMBL
Match: A0A1S3C6S1 (18.5 kDa class I heat shock protein-like OS=Cucumis melo OX=3656 GN=LOC103497111 PE=3 SV=1)

HSP 1 Score: 295.8 bits (756), Expect = 1.1e-76
Identity = 151/160 (94.38%), Postives = 156/160 (97.50%), Query Frame = 0


Query: 1   MSMIPSFFGGRRTSVFDPFATFDLSDPFDFHFPSSISSHFPEIARETSAIVNARVDWKET 60
           MSMIPSFF GR++SVFDPFATFDLSDPFDFHFPSSISSHFPEIARETSAIVNARVDWKET
Sbjct: 1   MSMIPSFFNGRQSSVFDPFATFDLSDPFDFHFPSSISSHFPEIARETSAIVNARVDWKET 60

Query: 61  PEAHVLKADLPGLKKEEVKVEIEDGKVIQMSGERNVEKEDKNEKWHRIERSSGKFQRRFR 120
           PEAHVLKADLPGLKKEEVKVEIEDGKVIQ+SGERNVEKEDKNEKWHRIERSSGKFQRRFR
Sbjct: 61  PEAHVLKADLPGLKKEEVKVEIEDGKVIQISGERNVEKEDKNEKWHRIERSSGKFQRRFR 120

Query: 121 MPEDAKMEEIRASMENGVLTVTVPKAEKTKTDVKSVDVSG 161
           MPEDAK EEIRASMENGVLTVTVPKAE  KTDVKSV++SG
Sbjct: 121 MPEDAKTEEIRASMENGVLTVTVPKAEGKKTDVKSVEISG 160

[Close]

BLAST of HG10021872 vs. ExPASy TrEMBL
Match: A0A5D3BFY1 (18.5 kDa class I heat shock protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold194G001650 PE=3 SV=1)

HSP 1 Score: 295.0 bits (754), Expect = 1.8e-76
Identity = 149/160 (93.12%), Postives = 157/160 (98.12%), Query Frame = 0


Query: 1   MSMIPSFFGGRRTSVFDPFATFDLSDPFDFHFPSSISSHFPEIARETSAIVNARVDWKET 60
           MSMIPSFFGGRR+SVFDPFATFDLSDPFDFHFPSSISSHFPEIARETSAIVNARVDWKET
Sbjct: 1   MSMIPSFFGGRRSSVFDPFATFDLSDPFDFHFPSSISSHFPEIARETSAIVNARVDWKET 60

Query: 61  PEAHVLKADLPGLKKEEVKVEIEDGKVIQMSGERNVEKEDKNEKWHRIERSSGKFQRRFR 120
           PEAHVLKADLPGLKKEEVKVEIEDGKVIQ+SGER+VEKEDKNEKWHR+ERSSGKF+RRFR
Sbjct: 61  PEAHVLKADLPGLKKEEVKVEIEDGKVIQISGERSVEKEDKNEKWHRMERSSGKFKRRFR 120

Query: 121 MPEDAKMEEIRASMENGVLTVTVPKAEKTKTDVKSVDVSG 161
           MPED KMEEIRASMENGVLTVTVPKAE+ K DVKSV++SG
Sbjct: 121 MPEDVKMEEIRASMENGVLTVTVPKAEEKKADVKSVEISG 160

[Close]

BLAST of HG10021872 vs. ExPASy TrEMBL
Match: A0A1S3C522 (18.5 kDa class I heat shock protein-like OS=Cucumis melo OX=3656 GN=LOC103497112 PE=3 SV=1)

HSP 1 Score: 295.0 bits (754), Expect = 1.8e-76
Identity = 149/160 (93.12%), Postives = 157/160 (98.12%), Query Frame = 0


Query: 1   MSMIPSFFGGRRTSVFDPFATFDLSDPFDFHFPSSISSHFPEIARETSAIVNARVDWKET 60
           MSMIPSFFGGRR+SVFDPFATFDLSDPFDFHFPSSISSHFPEIARETSAIVNARVDWKET
Sbjct: 1   MSMIPSFFGGRRSSVFDPFATFDLSDPFDFHFPSSISSHFPEIARETSAIVNARVDWKET 60

Query: 61  PEAHVLKADLPGLKKEEVKVEIEDGKVIQMSGERNVEKEDKNEKWHRIERSSGKFQRRFR 120
           PEAHVLKADLPGLKKEEVKVEIEDGKVIQ+SGER+VEKEDKNEKWHR+ERSSGKF+RRFR
Sbjct: 61  PEAHVLKADLPGLKKEEVKVEIEDGKVIQISGERSVEKEDKNEKWHRMERSSGKFKRRFR 120

Query: 121 MPEDAKMEEIRASMENGVLTVTVPKAEKTKTDVKSVDVSG 161
           MPED KMEEIRASMENGVLTVTVPKAE+ K DVKSV++SG
Sbjct: 121 MPEDVKMEEIRASMENGVLTVTVPKAEEKKADVKSVEISG 160

[Close]

BLAST of HG10021872 vs. TAIR 10
Match: AT5G59720.1 (heat shock protein 18.2 )

HSP 1 Score: 211.5 bits (537), Expect = 5.1e-55
Identity = 107/160 (66.88%), Postives = 131/160 (81.88%), Query Frame = 0


Query: 1   MSMIPSFFGGRRTSVFDPFATFDLSDPFDFHFPSSISSHFPEIARETSAIVNARVDWKET 60
           MS+IPS FGGRR++VFDPF+  DL DPF+  F  S +      AR+ +A  NARVDWKET
Sbjct: 1   MSLIPSIFGGRRSNVFDPFSQ-DLWDPFEGFFTPSSALANASTARDVAAFTNARVDWKET 60

Query: 61  PEAHVLKADLPGLKKEEVKVEIEDGKVIQMSGERNVEKEDKNEKWHRIERSSGKFQRRFR 120
           PEAHV KADLPGLKKEEVKVE+ED  V+Q+SGER+ E E+KN+KWHR+ER+SGKF RRFR
Sbjct: 61  PEAHVFKADLPGLKKEEVKVEVEDKNVLQISGERSKENEEKNDKWHRVERASGKFMRRFR 120

Query: 121 MPEDAKMEEIRASMENGVLTVTVPKAEKTKTDVKSVDVSG 161
           +PE+AKMEE++A+MENGVLTV VPKA + K  VKS+D+SG
Sbjct: 121 LPENAKMEEVKATMENGVLTVVVPKAPEKKPQVKSIDISG 159

[Close]

BLAST of HG10021872 vs. TAIR 10
Match: AT1G53540.1 (HSP20-like chaperones superfamily protein )

HSP 1 Score: 207.6 bits (527), Expect = 7.4e-54
Identity = 106/161 (65.84%), Postives = 135/161 (83.85%), Query Frame = 0


Query: 1   MSMIPSFFGGRRTSVFDPFATFDLSDPFD-FHFPSSISSHFPEIARETSAIVNARVDWKE 60
           MS+IPS FGGRRT+VFDPF + D+ DPF+ F  PS +++     A + +A  NA+VDW+E
Sbjct: 1   MSLIPSIFGGRRTNVFDPF-SLDVFDPFEGFLTPSGLAN---APAMDVAAFTNAKVDWRE 60

Query: 61  TPEAHVLKADLPGLKKEEVKVEIEDGKVIQMSGERNVEKEDKNEKWHRIERSSGKFQRRF 120
           TPEAHV KADLPGL+KEEVKVE+EDG ++Q+SGER+ E E+KN+KWHR+ERSSGKF RRF
Sbjct: 61  TPEAHVFKADLPGLRKEEVKVEVEDGNILQISGERSNENEEKNDKWHRVERSSGKFTRRF 120

Query: 121 RMPEDAKMEEIRASMENGVLTVTVPKAEKTKTDVKSVDVSG 161
           R+PE+AKMEEI+ASMENGVL+VTVPK  + K +VKS+D+SG
Sbjct: 121 RLPENAKMEEIKASMENGVLSVTVPKVPEKKPEVKSIDISG 157

[Close]

BLAST of HG10021872 vs. TAIR 10
Match: AT3G46230.1 (heat shock protein 17.4 )

HSP 1 Score: 204.9 bits (520), Expect = 4.8e-53
Identity = 100/160 (62.50%), Postives = 135/160 (84.38%), Query Frame = 0


Query: 1   MSMIPSFFGGRRTSVFDPFATFDLSDPFDFHFPSSISSHFPEIARETSAIVNARVDWKET 60
           MS++PSFFGGRRT+VFDPF + D+ DPF+      +++     A++ +A  NA+VDW+ET
Sbjct: 1   MSLVPSFFGGRRTNVFDPF-SLDVWDPFEGFLTPGLTN---APAKDVAAFTNAKVDWRET 60

Query: 61  PEAHVLKADLPGLKKEEVKVEIEDGKVIQMSGERNVEKEDKNEKWHRIERSSGKFQRRFR 120
           PEAHV KAD+PGLKKEEVKVE+EDG ++Q+SGER+ E E+K++ WHR+ERSSGKF RRFR
Sbjct: 61  PEAHVFKADVPGLKKEEVKVEVEDGNILQISGERSSENEEKSDTWHRVERSSGKFMRRFR 120

Query: 121 MPEDAKMEEIRASMENGVLTVTVPKAEKTKTDVKSVDVSG 161
           +PE+AK+EE++ASMENGVL+VTVPK +++K +VKSVD+SG
Sbjct: 121 LPENAKVEEVKASMENGVLSVTVPKVQESKPEVKSVDISG 156

[Close]

BLAST of HG10021872 vs. TAIR 10
Match: AT2G29500.1 (HSP20-like chaperones superfamily protein )

HSP 1 Score: 203.4 bits (516), Expect = 1.4e-52
Identity = 108/161 (67.08%), Postives = 132/161 (81.99%), Query Frame = 0


Query: 1   MSMIPSFF-GGRRTSVFDPFATFDLSDPFDFHFPSSISSHFPEIARETSAIVNARVDWKE 60
           MSMIPSFF   RR+++FDPF + D+ DPF     SS+S       RE SAIVNARVDW+E
Sbjct: 1   MSMIPSFFNNNRRSNIFDPF-SLDVWDPFKELTSSSLS-------RENSAIVNARVDWRE 60

Query: 61  TPEAHVLKADLPGLKKEEVKVEIEDGKVIQMSGERNVEKEDKNEKWHRIERSSGKFQRRF 120
           TPEAHV KADLPGLKKEEVKVEIE+  V+++SGER+VEKEDKN+ WHR+ERSSG+F RRF
Sbjct: 61  TPEAHVFKADLPGLKKEEVKVEIEEDSVLKISGERHVEKEDKNDTWHRVERSSGQFTRRF 120

Query: 121 RMPEDAKMEEIRASMENGVLTVTVPKAEKTKTDVKSVDVSG 161
           R+PE+ KM++++A+MENGVLTVTVPKAE  K DVKS+ +SG
Sbjct: 121 RLPENVKMDQVKAAMENGVLTVTVPKAETKKADVKSIQISG 153

[Close]

BLAST of HG10021872 vs. TAIR 10
Match: AT1G07400.1 (HSP20-like chaperones superfamily protein )

HSP 1 Score: 196.4 bits (498), Expect = 1.7e-50
Identity = 106/165 (64.24%), Postives = 131/165 (79.39%), Query Frame = 0


Query: 1   MSMIPSFFGGRR--TSVFDPFATFDLSDPF-DFHFPSSISSHFPEIARETSAIVNARVDW 60
           MS+IPSFFG  R   S+FDPF + D+ DPF +  FPSS+S        ETSAI NARVDW
Sbjct: 1   MSLIPSFFGNNRRSNSIFDPF-SLDVWDPFKELQFPSSLSG-------ETSAITNARVDW 60

Query: 61  KETPEAHVLKADLPGLKKEEVKVEIEDGKVIQMSGERNVEKEDKNEKWHRIERSSGKFQR 120
           KET EAHV KADLPG+KKEEVKVEIED  V+++SGER+VEKE+K + WHR+ERSSG+F R
Sbjct: 61  KETAEAHVFKADLPGMKKEEVKVEIEDDSVLKISGERHVEKEEKQDTWHRVERSSGQFSR 120

Query: 121 RFRMPEDAKMEEIRASMENGVLTVTVPKAE--KTKTDVKSVDVSG 161
           +F++PE+ KM++++ASMENGVLTVTVPK E  K K  VKS+D+SG
Sbjct: 121 KFKLPENVKMDQVKASMENGVLTVTVPKVEEAKKKAQVKSIDISG 157

The following BLAST results are available for this feature:

BLAST of HG10021872 vs. NCBI nr


Match Name	E-value	Identity	Description
ADU55790.1	9.9e-77	92.50	HSP18.2A [Citrullus lanatus]	[more]
XP_008457419.1	2.2e-76	94.38	PREDICTED: 18.5 kDa class I heat shock protein-like [Cucumis melo] >KAA0031778.1...	[more]
XP_008457420.1	3.8e-76	93.13	PREDICTED: 18.5 kDa class I heat shock protein-like [Cucumis melo] >KAA0031777.1...	[more]
XP_038894963.1	1.4e-75	93.75	18.5 kDa class I heat shock protein-like [Benincasa hispida]	[more]
XP_023519957.1	1.2e-74	90.63	18.5 kDa class I heat shock protein-like [Cucurbita pepo subsp. pepo] >XP_023522...	[more]

BLAST of HG10021872 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P05478	3.3e-59	71.60	18.5 kDa class I heat shock protein OS=Glycine max OX=3847 GN=HSP18.5-C PE=3 SV=...	[more]
P02519	3.5e-56	70.19	17.3 kDa class I heat shock protein OS=Glycine max OX=3847 GN=HSP17.3-B PE=3 SV=...	[more]
P27880	1.3e-55	69.75	18.2 kDa class I heat shock protein OS=Medicago sativa OX=3879 GN=HSP18.2 PE=2 S...	[more]
P04793	1.3e-55	68.32	17.5 kDa class I heat shock protein OS=Glycine max OX=3847 GN=HSP17.5-M PE=3 SV=...	[more]
P04794	2.9e-55	68.32	17.5 kDa class I heat shock protein OS=Glycine max OX=3847 GN=HSP17.5-E PE=3 SV=...	[more]

BLAST of HG10021872 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
H6TB43	4.8e-77	92.50	HSP18.2A OS=Citrullus lanatus OX=3654 PE=2 SV=1	[more]
A0A5D3BEA2	1.1e-76	94.38	18.5 kDa class I heat shock protein-like OS=Cucumis melo var. makuwa OX=1194695 ...	[more]
A0A1S3C6S1	1.1e-76	94.38	18.5 kDa class I heat shock protein-like OS=Cucumis melo OX=3656 GN=LOC103497111...	[more]
A0A5D3BFY1	1.8e-76	93.13	18.5 kDa class I heat shock protein-like OS=Cucumis melo var. makuwa OX=1194695 ...	[more]
A0A1S3C522	1.8e-76	93.13	18.5 kDa class I heat shock protein-like OS=Cucumis melo OX=3656 GN=LOC103497112...	[more]

BLAST of HG10021872 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G59720.1	5.1e-55	66.88	heat shock protein 18.2	[more]
AT1G53540.1	7.4e-54	65.84	HSP20-like chaperones superfamily protein	[more]
AT3G46230.1	4.8e-53	62.50	heat shock protein 17.4	[more]
AT2G29500.1	1.4e-52	67.08	HSP20-like chaperones superfamily protein	[more]
AT1G07400.1	1.7e-50	64.24	HSP20-like chaperones superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002068	Alpha crystallin/Hsp20 domain	PFAM	PF00011	HSP20	coord: 56..159 e-value: 1.8E-29 score: 101.8
IPR002068	Alpha crystallin/Hsp20 domain	PROSITE	PS01031	SHSP	coord: 46..160 score: 30.27002
IPR008978	HSP20-like chaperone	GENE3D	2.60.40.790		coord: 10..160 e-value: 9.1E-48 score: 163.8
IPR008978	HSP20-like chaperone	SUPERFAMILY	49764	HSP20-like chaperones	coord: 26..159
None	No IPR available	PANTHER	PTHR11527:SF332	17.5 KDA CLASS I HEAT SHOCK PROTEIN	coord: 1..160
None	No IPR available	CDD	cd06472	ACD_ScHsp26_like	coord: 54..145 e-value: 2.09507E-52 score: 159.778
IPR031107	Small heat shock protein HSP20	PANTHER	PTHR11527	HEAT-SHOCK PROTEIN 20 FAMILY MEMBER	coord: 1..160

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10021872.1	HG10021872.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0051259	protein complex oligomerization
biological_process	GO:0006457	protein folding
biological_process	GO:0009408	response to heat
biological_process	GO:0042542	response to hydrogen peroxide
biological_process	GO:0009651	response to salt stress
molecular_function	GO:0043621	protein self-association
molecular_function	GO:0051082	unfolded protein binding