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HG10021868 (gene) Bottle gourd (Hangzhou Gourd) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCGGCGGTTGAAGCTCCCCGTGGTGACCCGGACCCTGCGAATCCGAGCTCTGTGACATTTCGCGATGCTCGTTCAGCAGCTGGGAGCTGCAGCGACATGTCGGTACTTGATGATTCCGACGACCAGTCGTGGCACTCGGTTTTCGACTCTACAGCTTCGGGATCTCACGGCGAGGGCCAGTTTTCCGGCGAGATAGAGGGCGTCCCGGATGCTGAAATGGGTCATTTCATCTCGGAGAGCTCGTCAGAGGTGGATTTGGAGAGCGGGGATTTGGAGGTGAAGGTGCATTTGGGCAAGATCGAAAGGGATTGCAGAATTTGTCACTTGGAGCTGGAAAGCAGAGGAGGAAGAGATAATTCTGATACTCCAATTCAGCTTGGTTGTTGCTGTCGAGGTGATTTGGGTACTGCCCACAAGCAATGTGCTGAGACTTGGTTCAAAATCAAGGGAAATACGTAAGTAATTATTCTAATTAACTCCCATTTTCCCCCATCAGATTTCATCCCCATCAGAAACCCAATTCTTGATTTTATCTCTCCACCTTTCTTCAATATACTTTTGAATCTTTTGATCATCAATGGCCTTGCTGAAGTTTTACCTAGACTTGGTTTAGCTTGGCTCTTGCTAATAGTTTCATTGCTACCTAGGGAAACATGCCTAAATCTCCTCTGCTTCTTCTTTTAGCAACAATTCACTTGAGTCTTCTGCCGTGAATTGCCCCCAAACAGTTCCATCTTCCATCTCTATGTTGTATTCTGTAAATTCATTATGACTAAAAACTTTAAGTCCTTGGATCTTCTGCAGCCAGCATTTAGTTTTCTTCACAGTACTTGATTTTTTCTGTCCTAACTTCTAAGTTGTTCAAATTTAGCATTCATCAGTACATTATCATGTAGATAAGACAAAGAATGATATATGACATATCTGAAGGTTGGATATCTCCTTTTTCTTCTTTGTATTTAAATGTATGATGGTGTCACACTTAAATTCCTATAAATTTCCATGTGGCAAAGTTTAACTTACAAACTTGTCCGTAGCTAATCTGTTCCATCTTTTTTTTGTTTGTGATAACATAGATCAGATACGTGTTTTCTTTTTTCAGATACTTAGAATTTGGGCAGACGAATGAGTATTCTGGTTAGAAACCTTACATCAACTAGATTTTGTTTGTAAAGCTTCACTATTGAGAATGAACGTATTGTCCTTAAGTTAATGTCTTCTCATATTACAAGGCGTTCATCGGACATAAATGGGGCATTTGATCGTTTATATGAGCCTGACTGTTCTCGAACGTAGAAATATCATCGGTATATCTTGAAGGTGTTGGAGATTGTTTAACTCTTTAGTTAGGAACTTTCAATCAACCAAATTTAGATTTTTTGCTGATTGGTGTATATACCAAATTGACCCTCCCATGTGTGAGTGAAAATTTGAACCTCTAACCAATTGAATTATGCTTCGGTTGAGAATATGTCGATACCTTGTTGTTGTGAGTTATGACTATTAACTTGACAAGCAATATGATCTTTTTCTTGCAGAATTTGCGAGATATGTGGGGCAACTGCACAAAATGTTGCAAGTCAACAAATAAATGAACCGAGCACTGCGGTTGCAGCTGCTGTAGCATCCTCAGCTTTGACAGCACCCCTAACTCTCGTTGAGACTCGAACAATCTTTCACGGTCGACGTATTATGAACTTTCTACTTGCTTGCATGCTCCTTGCATTTGCAATGTCTTGGCTTTTTCACTTCAAATTAATGTCATAG ATGTCGGCGGTTGAAGCTCCCCGTGGTGACCCGGACCCTGCGAATCCGAGCTCTGTGACATTTCGCGATGCTCGTTCAGCAGCTGGGAGCTGCAGCGACATGTCGGTACTTGATGATTCCGACGACCAGTCGTGGCACTCGGTTTTCGACTCTACAGCTTCGGGATCTCACGGCGAGGGCCAGTTTTCCGGCGAGATAGAGGGCGTCCCGGATGCTGAAATGGGTCATTTCATCTCGGAGAGCTCGTCAGAGGTGGATTTGGAGAGCGGGGATTTGGAGGTGAAGGTGCATTTGGGCAAGATCGAAAGGGATTGCAGAATTTGTCACTTGGAGCTGGAAAGCAGAGGAGGAAGAGATAATTCTGATACTCCAATTCAGCTTGGTTGTTGCTGTCGAGGTGATTTGGGTACTGCCCACAAGCAATGTGCTGAGACTTGGTTCAAAATCAAGGGAAATACAATTTGCGAGATATGTGGGGCAACTGCACAAAATGTTGCAAGTCAACAAATAAATGAACCGAGCACTGCGGTTGCAGCTGCTGTAGCATCCTCAGCTTTGACAGCACCCCTAACTCTCGTTGAGACTCGAACAATCTTTCACGGTCGACGTATTATGAACTTTCTACTTGCTTGCATGCTCCTTGCATTTGCAATGTCTTGGCTTTTTCACTTCAAATTAATGTCATAG ATGTCGGCGGTTGAAGCTCCCCGTGGTGACCCGGACCCTGCGAATCCGAGCTCTGTGACATTTCGCGATGCTCGTTCAGCAGCTGGGAGCTGCAGCGACATGTCGGTACTTGATGATTCCGACGACCAGTCGTGGCACTCGGTTTTCGACTCTACAGCTTCGGGATCTCACGGCGAGGGCCAGTTTTCCGGCGAGATAGAGGGCGTCCCGGATGCTGAAATGGGTCATTTCATCTCGGAGAGCTCGTCAGAGGTGGATTTGGAGAGCGGGGATTTGGAGGTGAAGGTGCATTTGGGCAAGATCGAAAGGGATTGCAGAATTTGTCACTTGGAGCTGGAAAGCAGAGGAGGAAGAGATAATTCTGATACTCCAATTCAGCTTGGTTGTTGCTGTCGAGGTGATTTGGGTACTGCCCACAAGCAATGTGCTGAGACTTGGTTCAAAATCAAGGGAAATACAATTTGCGAGATATGTGGGGCAACTGCACAAAATGTTGCAAGTCAACAAATAAATGAACCGAGCACTGCGGTTGCAGCTGCTGTAGCATCCTCAGCTTTGACAGCACCCCTAACTCTCGTTGAGACTCGAACAATCTTTCACGGTCGACGTATTATGAACTTTCTACTTGCTTGCATGCTCCTTGCATTTGCAATGTCTTGGCTTTTTCACTTCAAATTAATGTCATAG MSAVEAPRGDPDPANPSSVTFRDARSAAGSCSDMSVLDDSDDQSWHSVFDSTASGSHGEGQFSGEIEGVPDAEMGHFISESSSEVDLESGDLEVKVHLGKIERDCRICHLELESRGGRDNSDTPIQLGCCCRGDLGTAHKQCAETWFKIKGNTICEICGATAQNVASQQINEPSTAVAAAVASSALTAPLTLVETRTIFHGRRIMNFLLACMLLAFAMSWLFHFKLMS Homology
BLAST of HG10021868 vs. NCBI nr
Match: XP_011658411.1 (uncharacterized protein LOC101212160 isoform X2 [Cucumis sativus]) HSP 1 Score: 434.9 bits (1117), Expect = 4.4e-118 Identity = 221/228 (96.93%), Postives = 222/228 (97.37%), Query Frame = 0
BLAST of HG10021868 vs. NCBI nr
Match: XP_004145266.2 (uncharacterized protein LOC101212160 isoform X1 [Cucumis sativus] >KGN65776.1 hypothetical protein Csa_023291 [Cucumis sativus]) HSP 1 Score: 434.9 bits (1117), Expect = 4.4e-118 Identity = 221/228 (96.93%), Postives = 222/228 (97.37%), Query Frame = 0
BLAST of HG10021868 vs. NCBI nr
Match: XP_038895035.1 (uncharacterized protein LOC120083374 [Benincasa hispida] >XP_038895036.1 uncharacterized protein LOC120083374 [Benincasa hispida]) HSP 1 Score: 434.1 bits (1115), Expect = 7.4e-118 Identity = 221/228 (96.93%), Postives = 221/228 (96.93%), Query Frame = 0
BLAST of HG10021868 vs. NCBI nr
Match: XP_008457415.1 (PREDICTED: uncharacterized protein LOC103497107 isoform X2 [Cucumis melo]) HSP 1 Score: 432.6 bits (1111), Expect = 2.2e-117 Identity = 221/228 (96.93%), Postives = 222/228 (97.37%), Query Frame = 0
BLAST of HG10021868 vs. NCBI nr
Match: XP_008457414.1 (PREDICTED: uncharacterized protein LOC103497107 isoform X1 [Cucumis melo] >KAA0031780.1 E3 ubiquitin-protein ligase MARCH1 [Cucumis melo var. makuwa] >TYJ97351.1 E3 ubiquitin-protein ligase MARCH1 [Cucumis melo var. makuwa]) HSP 1 Score: 432.6 bits (1111), Expect = 2.2e-117 Identity = 221/228 (96.93%), Postives = 222/228 (97.37%), Query Frame = 0
BLAST of HG10021868 vs. ExPASy TrEMBL
Match: A0A0A0M0P0 (RING-CH-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G527920 PE=4 SV=1) HSP 1 Score: 434.9 bits (1117), Expect = 2.1e-118 Identity = 221/228 (96.93%), Postives = 222/228 (97.37%), Query Frame = 0
BLAST of HG10021868 vs. ExPASy TrEMBL
Match: A0A5D3BFF6 (E3 ubiquitin-protein ligase MARCH1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold194G001610 PE=4 SV=1) HSP 1 Score: 432.6 bits (1111), Expect = 1.0e-117 Identity = 221/228 (96.93%), Postives = 222/228 (97.37%), Query Frame = 0
BLAST of HG10021868 vs. ExPASy TrEMBL
Match: A0A1S3C517 (uncharacterized protein LOC103497107 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103497107 PE=4 SV=1) HSP 1 Score: 432.6 bits (1111), Expect = 1.0e-117 Identity = 221/228 (96.93%), Postives = 222/228 (97.37%), Query Frame = 0
BLAST of HG10021868 vs. ExPASy TrEMBL
Match: A0A1S3C6R6 (uncharacterized protein LOC103497107 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103497107 PE=4 SV=1) HSP 1 Score: 432.6 bits (1111), Expect = 1.0e-117 Identity = 221/228 (96.93%), Postives = 222/228 (97.37%), Query Frame = 0
BLAST of HG10021868 vs. ExPASy TrEMBL
Match: A0A6J1HM49 (uncharacterized protein LOC111464834 OS=Cucurbita moschata OX=3662 GN=LOC111464834 PE=4 SV=1) HSP 1 Score: 387.5 bits (994), Expect = 3.9e-104 Identity = 205/233 (87.98%), Postives = 213/233 (91.42%), Query Frame = 0
BLAST of HG10021868 vs. TAIR 10
Match: AT5G05830.1 (RING/FYVE/PHD zinc finger superfamily protein ) HSP 1 Score: 144.1 bits (362), Expect = 1.4e-34 Identity = 89/188 (47.34%), Postives = 114/188 (60.64%), Query Frame = 0
BLAST of HG10021868 vs. TAIR 10
Match: AT5G59000.1 (RING/FYVE/PHD zinc finger superfamily protein ) HSP 1 Score: 138.7 bits (348), Expect = 6.0e-33 Identity = 86/198 (43.43%), Postives = 108/198 (54.55%), Query Frame = 0
BLAST of HG10021868 vs. TAIR 10
Match: AT2G37950.1 (RING/FYVE/PHD zinc finger superfamily protein ) HSP 1 Score: 118.6 bits (296), Expect = 6.4e-27 Identity = 81/209 (38.76%), Postives = 110/209 (52.63%), Query Frame = 0
BLAST of HG10021868 vs. TAIR 10
Match: AT5G01070.2 (RING/FYVE/PHD zinc finger superfamily protein ) HSP 1 Score: 112.8 bits (281), Expect = 3.5e-25 Identity = 81/205 (39.51%), Postives = 98/205 (47.80%), Query Frame = 0
BLAST of HG10021868 vs. TAIR 10
Match: AT2G34200.1 (RING/FYVE/PHD zinc finger superfamily protein ) HSP 1 Score: 80.9 bits (198), Expect = 1.5e-15 Identity = 36/69 (52.17%), Postives = 47/69 (68.12%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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