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HG10021820 (gene) Bottle gourd (Hangzhou Gourd) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATTATTTCGAAGCTCGTCTTACCCTCTTCCTCTCATTTGCTCTCATCACTGCAGCTCGACTCACGCCCCATTCAGGTATGCACACTGCTACTGGTTGTTGAAAAGTCTAGATTTATGTAGCTCGTGTTTTGAATAGTGTATAAAAATTAAATCTAATATCATGTCAGAAAAACAAGACACGGCGATTATGATAAAGGACTATACTGATCCAGGAGCTAATCCAAGACATGATCCAAACCAACCGCCAATGATGATAAATGATTATACTGATCCAGGAGCTAATCCAAGACATGACCCAAACCAGCCGCCAATGATGATAAATGACTATGCTGATCCAAGAGCTAATCCAAGACATGATCCAAACCAACCGCCAATGATGATAAATGATTATGCTGATCCAGGAGCTAATCCAAGACATGATCCAAACCAACCGCCAATGATGATAAATGACTATACTGATCCAGGAGCTAATCCAAGACATGATCCAAATCAGCCGCCTCCACCTTCGCCTCGACGATTTGAGGTTAGAACTACCAATGGCCACATTAGCAGAAATCTCTAA ATGGATTATTTCGAAGCTCGTCTTACCCTCTTCCTCTCATTTGCTCTCATCACTGCAGCTCGACTCACGCCCCATTCAGAAAAACAAGACACGGCGATTATGATAAAGGACTATACTGATCCAGGAGCTAATCCAAGACATGATCCAAACCAACCGCCAATGATGATAAATGATTATACTGATCCAGGAGCTAATCCAAGACATGACCCAAACCAGCCGCCAATGATGATAAATGACTATGCTGATCCAAGAGCTAATCCAAGACATGATCCAAACCAACCGCCAATGATGATAAATGATTATGCTGATCCAGGAGCTAATCCAAGACATGATCCAAACCAACCGCCAATGATGATAAATGACTATACTGATCCAGGAGCTAATCCAAGACATGATCCAAATCAGCCGCCTCCACCTTCGCCTCGACGATTTGAGGTTAGAACTACCAATGGCCACATTAGCAGAAATCTCTAA ATGGATTATTTCGAAGCTCGTCTTACCCTCTTCCTCTCATTTGCTCTCATCACTGCAGCTCGACTCACGCCCCATTCAGAAAAACAAGACACGGCGATTATGATAAAGGACTATACTGATCCAGGAGCTAATCCAAGACATGATCCAAACCAACCGCCAATGATGATAAATGATTATACTGATCCAGGAGCTAATCCAAGACATGACCCAAACCAGCCGCCAATGATGATAAATGACTATGCTGATCCAAGAGCTAATCCAAGACATGATCCAAACCAACCGCCAATGATGATAAATGATTATGCTGATCCAGGAGCTAATCCAAGACATGATCCAAACCAACCGCCAATGATGATAAATGACTATACTGATCCAGGAGCTAATCCAAGACATGATCCAAATCAGCCGCCTCCACCTTCGCCTCGACGATTTGAGGTTAGAACTACCAATGGCCACATTAGCAGAAATCTCTAA MDYFEARLTLFLSFALITAARLTPHSEKQDTAIMIKDYTDPGANPRHDPNQPPMMINDYTDPGANPRHDPNQPPMMINDYADPRANPRHDPNQPPMMINDYADPGANPRHDPNQPPMMINDYTDPGANPRHDPNQPPPPSPRRFEVRTTNGHISRNL Homology
BLAST of HG10021820 vs. NCBI nr
Match: XP_038895781.1 (circumsporozoite protein-like [Benincasa hispida]) HSP 1 Score: 253.4 bits (646), Expect = 1.2e-63 Identity = 126/174 (72.41%), Postives = 133/174 (76.44%), Query Frame = 0
BLAST of HG10021820 vs. NCBI nr
Match: KAF4369213.1 (hypothetical protein G4B88_009511 [Cannabis sativa] >KAF4387559.1 hypothetical protein F8388_011707 [Cannabis sativa]) HSP 1 Score: 107.5 bits (267), Expect = 1.1e-19 Identity = 63/153 (41.18%), Postives = 82/153 (53.59%), Query Frame = 0
BLAST of HG10021820 vs. NCBI nr
Match: XP_022948581.1 (extensin-like isoform X2 [Cucurbita moschata]) HSP 1 Score: 104.0 bits (258), Expect = 1.2e-18 Identity = 78/194 (40.21%), Postives = 94/194 (48.45%), Query Frame = 0
BLAST of HG10021820 vs. NCBI nr
Match: XP_030505386.1 (sporozoite surface protein 2-like [Cannabis sativa]) HSP 1 Score: 103.2 bits (256), Expect = 2.1e-18 Identity = 61/150 (40.67%), Postives = 80/150 (53.33%), Query Frame = 0
BLAST of HG10021820 vs. NCBI nr
Match: XP_022948580.1 (extensin-like isoform X1 [Cucurbita moschata]) HSP 1 Score: 99.0 bits (245), Expect = 3.9e-17 Identity = 78/196 (39.80%), Postives = 94/196 (47.96%), Query Frame = 0
BLAST of HG10021820 vs. ExPASy TrEMBL
Match: A0A7J6FET4 (Uncharacterized protein OS=Cannabis sativa OX=3483 GN=F8388_011707 PE=4 SV=1) HSP 1 Score: 107.5 bits (267), Expect = 5.3e-20 Identity = 63/153 (41.18%), Postives = 82/153 (53.59%), Query Frame = 0
BLAST of HG10021820 vs. ExPASy TrEMBL
Match: A0A6J1G9M0 (extensin-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111452213 PE=4 SV=1) HSP 1 Score: 104.0 bits (258), Expect = 5.9e-19 Identity = 78/194 (40.21%), Postives = 94/194 (48.45%), Query Frame = 0
BLAST of HG10021820 vs. ExPASy TrEMBL
Match: A0A6J1GAA0 (extensin-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111452213 PE=4 SV=1) HSP 1 Score: 99.0 bits (245), Expect = 1.9e-17 Identity = 78/196 (39.80%), Postives = 94/196 (47.96%), Query Frame = 0
BLAST of HG10021820 vs. ExPASy TrEMBL
Match: A0A7J6FEU1 (Uncharacterized protein OS=Cannabis sativa OX=3483 GN=G4B88_009514 PE=4 SV=1) HSP 1 Score: 94.7 bits (234), Expect = 3.6e-16 Identity = 57/143 (39.86%), Postives = 73/143 (51.05%), Query Frame = 0
BLAST of HG10021820 vs. ExPASy TrEMBL
Match: A0A0E0DTA0 (Uncharacterized protein OS=Oryza meridionalis OX=40149 PE=4 SV=1) HSP 1 Score: 94.4 bits (233), Expect = 4.6e-16 Identity = 54/140 (38.57%), Postives = 71/140 (50.71%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
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