Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGAGAAGATATACCAATACCAATTCATGTGAAGGGAAAAATAGAGACTTTAAATCAAGCGATGGGTAACTTTGTAAGATGGCATCGTCAACTTGTAATTATGACTGACGAGAAACAAGTATGTTCCTTTTTCACTCTATGAGTTTTGTTATTATGATTATTATTTTTACTTTGAATTTGTAACTTTGGTTATGGTAGGAGAATTCAACTATTAGGACTGTTGGGTATTCATCCAAATATACGGACACCAATGGCACCATCAAGCTCCTGAATGGACATGTTGTACATAACATGAAAGATGTAGACATGATTCACATCAATTTGAACGAGCACATATTTGAAAATAATAAATTTGTCTATTTAGGTCGTGATGACTTAATGCATTTTGCGGTATGGTTGAAATTGGTTAGATATGTGTACTCACATACATTGTGTAAGTATTACTCATCTTGATTCACAATCTCCATGTATATATCTTTTTCATGATTAAGTAATAACTTATGTTTTGTTTAGGTATTTTGGGATGCATGTGATCGTGAGACAACTAAAAAGTTTTTTGTAATTGATCAATAAAAAATATCACCACATGTAAAGTCTTCAGACCTTCAATCTAGAAATTTAGCCAACCAACTGGAGTTGGCTAATTTGGAACAATTAGTTCTCATTCCATATAACACGGGGTACGTAAATGTCAATTGCCTTAGTTATTTTTAA
mRNA sequence
ATGGGAGAAGATATACCAATACCAATTCATGTGAAGGGAAAAATAGAGACTTTAAATCAAGCGATGGGTAACTTTGTAAGATGGCATCGTCAACTTGTAATTATGACTGACGAGAAACAAGAGAATTCAACTATTAGGACTGTTGGGTATTCATCCAAATATACGGACACCAATGGCACCATCAAGCTCCTGAATGGACATGTTGTACATAACATGAAAGATGTAGACATGATTCACATCAATTTGAACGAGCACATATTTGAAAATAATAAATTTGTCTATTTAGGTCGTGATGACTTAATGCATTTTGCGGTATGGTTGAAATTGGTTAGATATGTGTACTCACATACATTGTACCTTCAATCTAGAAATTTAGCCAACCAACTGGAGTTGGCTAATTTGGAACAATTAGTTCTCATTCCATATAACACGGGGTACGTAAATGTCAATTGCCTTAGTTATTTTTAA
Coding sequence (CDS)
ATGGGAGAAGATATACCAATACCAATTCATGTGAAGGGAAAAATAGAGACTTTAAATCAAGCGATGGGTAACTTTGTAAGATGGCATCGTCAACTTGTAATTATGACTGACGAGAAACAAGAGAATTCAACTATTAGGACTGTTGGGTATTCATCCAAATATACGGACACCAATGGCACCATCAAGCTCCTGAATGGACATGTTGTACATAACATGAAAGATGTAGACATGATTCACATCAATTTGAACGAGCACATATTTGAAAATAATAAATTTGTCTATTTAGGTCGTGATGACTTAATGCATTTTGCGGTATGGTTGAAATTGGTTAGATATGTGTACTCACATACATTGTACCTTCAATCTAGAAATTTAGCCAACCAACTGGAGTTGGCTAATTTGGAACAATTAGTTCTCATTCCATATAACACGGGGTACGTAAATGTCAATTGCCTTAGTTATTTTTAA
Protein sequence
MGEDIPIPIHVKGKIETLNQAMGNFVRWHRQLVIMTDEKQENSTIRTVGYSSKYTDTNGTIKLLNGHVVHNMKDVDMIHINLNEHIFENNKFVYLGRDDLMHFAVWLKLVRYVYSHTLYLQSRNLANQLELANLEQLVLIPYNTGYVNVNCLSYF
Homology
BLAST of HG10021811 vs. NCBI nr
Match:
KAA0059922.1 (40S ribosomal protein S13-like [Cucumis melo var. makuwa])
HSP 1 Score: 153.7 bits (387), Expect = 1.3e-33
Identity = 88/173 (50.87%), Postives = 109/173 (63.01%), Query Frame = 0
Query: 2 GEDIPIPIHVKGKIETLNQAMGNFVRWHRQLVIMTDEKQENSTIRTVGYSSKYTDTNGTI 61
GE++ IP VKGKIETLNQA+GN + W R+LV + KQE ST + V YSS YTD NG I
Sbjct: 233 GENLTIPNPVKGKIETLNQALGNIIEWPRRLVSTINNKQEGSTRKDVVYSSNYTDVNGII 292
Query: 62 KLLNGHVVHNMKDVDMIHINLNEHIFENNKFVYLGRDDLMHFAVWLK-----LVRYV--- 121
KLLN H V+NMKDVDMI I +NE IF ++KFVYL R+DL+H+ L+ ++ Y+
Sbjct: 293 KLLNRHAVNNMKDVDMIRIPMNELIFGSDKFVYLAREDLLHYCGMLEIGYMCILAYITCL 352
Query: 122 --------------------YSHTLYLQSRNLANQLELANLEQLVLIPYNTGY 147
+ L+SRNLANQLE NLEQ VLIPYNTG+
Sbjct: 353 WDKCDCARNFFVIDQSKISSHIKDRDLRSRNLANQLEAVNLEQKVLIPYNTGF 405
BLAST of HG10021811 vs. NCBI nr
Match:
KAA0056784.1 (uncharacterized protein E6C27_scaffold486G00760 [Cucumis melo var. makuwa])
HSP 1 Score: 152.5 bits (384), Expect = 2.9e-33
Identity = 90/172 (52.33%), Postives = 109/172 (63.37%), Query Frame = 0
Query: 2 GEDIPIPIHVKGKIETLNQAMGNFVRWHRQLVIMTDEKQENSTIRTVGYSSKYTDTNGTI 61
GE++ IP VKGKIETLNQA+GN + W R+LV ++KQE+ST + V YSS YTD NG I
Sbjct: 46 GENLTIPNPVKGKIETLNQALGNIIEWPRRLVSTINDKQEHSTRKDVVYSSNYTDVNGII 105
Query: 62 KLLNGHVVHNMKDVDMIHINLNEHIFENNKFVYLGRDDLMHF----------------AV 121
KLLN H V+NMKDVDMI I +NE IF ++KFVYL R+DL+H+ +
Sbjct: 106 KLLNRHAVNNMKDVDMIRIPMNELIFGSDKFVYLAREDLLHYRGMVEIGYMCILAYITCL 165
Query: 122 WLKL----------VRYVYSH--TLYLQSRNLANQLELANLEQLVLIPYNTG 146
W K + SH L+SRNLANQLE NLEQ VLIPYNTG
Sbjct: 166 WDKCDCARNFFVIDQSKISSHIKDRDLRSRNLANQLEAVNLEQKVLIPYNTG 217
BLAST of HG10021811 vs. NCBI nr
Match:
TYJ95752.1 (uncharacterized protein E5676_scaffold110G00080 [Cucumis melo var. makuwa])
HSP 1 Score: 152.1 bits (383), Expect = 3.8e-33
Identity = 86/173 (49.71%), Postives = 111/173 (64.16%), Query Frame = 0
Query: 2 GEDIPIPIHVKGKIETLNQAMGNFVRWHRQLVIMTDEKQENSTIRTVGYSSKYTDTNGTI 61
GE++ IP VKGKIETLNQA+GN + W R+LV M +EKQE+ST + V YSS YTD NG I
Sbjct: 242 GENLTIPNPVKGKIETLNQALGNIIEWPRRLVSMINEKQEHSTRKDVVYSSNYTDVNGMI 301
Query: 62 KLLNGHVVHNMKDVDMIHINLNEHIFENNKFVYLGRDDLMHFA-----VWLKLVRYV--- 121
KLLN H V+NMKDVDMI I +NE I ++KFVYL R+DL+H+ ++ ++ Y+
Sbjct: 302 KLLNRHAVNNMKDVDMIRIPMNELISGSDKFVYLAREDLLHYCGMVEISYMCILAYITCL 361
Query: 122 --------------------YSHTLYLQSRNLANQLELANLEQLVLIPYNTGY 147
+ L+S+NLANQLE NLEQ +LIPYNTG+
Sbjct: 362 WDKCDCARNFFVIDQSKISSHIKDRDLRSKNLANQLEAVNLEQKMLIPYNTGF 414
BLAST of HG10021811 vs. NCBI nr
Match:
KAA0063474.1 (uncharacterized protein E6C27_scaffold977G00630 [Cucumis melo var. makuwa])
HSP 1 Score: 152.1 bits (383), Expect = 3.8e-33
Identity = 86/173 (49.71%), Postives = 111/173 (64.16%), Query Frame = 0
Query: 2 GEDIPIPIHVKGKIETLNQAMGNFVRWHRQLVIMTDEKQENSTIRTVGYSSKYTDTNGTI 61
GE++ IP VKGKIETLNQA+GN + W R+LV M +EKQE+ST + V YSS YTD NG I
Sbjct: 638 GENLTIPNPVKGKIETLNQALGNIIEWPRRLVSMINEKQEHSTRKDVVYSSNYTDVNGMI 697
Query: 62 KLLNGHVVHNMKDVDMIHINLNEHIFENNKFVYLGRDDLMHFA-----VWLKLVRYV--- 121
KLLN H V+NMKDVDMI I +NE I ++KFVYL R+DL+H+ ++ ++ Y+
Sbjct: 698 KLLNRHAVNNMKDVDMIRIPMNELISGSDKFVYLAREDLLHYCGMVEISYMCILAYITCL 757
Query: 122 --------------------YSHTLYLQSRNLANQLELANLEQLVLIPYNTGY 147
+ L+S+NLANQLE NLEQ +LIPYNTG+
Sbjct: 758 WDKCDCARNFFVIDQSKISSHIKDRDLRSKNLANQLEAVNLEQKMLIPYNTGF 810
BLAST of HG10021811 vs. NCBI nr
Match:
KAA0067800.1 (uncharacterized protein E6C27_scaffold2484G00030 [Cucumis melo var. makuwa])
HSP 1 Score: 151.0 bits (380), Expect = 8.5e-33
Identity = 86/173 (49.71%), Postives = 109/173 (63.01%), Query Frame = 0
Query: 2 GEDIPIPIHVKGKIETLNQAMGNFVRWHRQLVIMTDEKQENSTIRTVGYSSKYTDTNGTI 61
GE++ IP VKGKIETLNQA+GN + W RQLV ++KQE+ST + V Y S YTD NG I
Sbjct: 352 GENLTIPNLVKGKIETLNQALGNIIEWPRQLVSTINDKQEHSTRKDVVYHSNYTDVNGII 411
Query: 62 KLLNGHVVHNMKDVDMIHINLNEHIFENNKFVYLGRDDLMHFA-----VWLKLVRYV--- 121
KLLN H V+NMKDVDMI I +NE IF ++KFVYL R+DL+H+ ++ ++ Y+
Sbjct: 412 KLLNRHAVNNMKDVDMIRIPMNELIFGSDKFVYLAREDLLHYCDMVEIGYMCILAYITCL 471
Query: 122 --------------------YSHTLYLQSRNLANQLELANLEQLVLIPYNTGY 147
+ L+ RNLANQLE NLEQ VLIPYNTG+
Sbjct: 472 WDKCDCARNFFVIDQSKISSHIKDRDLRPRNLANQLEAVNLEQKVLIPYNTGF 524
BLAST of HG10021811 vs. ExPASy TrEMBL
Match:
A0A5A7UVK8 (40S ribosomal protein S13-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold108G002270 PE=3 SV=1)
HSP 1 Score: 153.7 bits (387), Expect = 6.4e-34
Identity = 88/173 (50.87%), Postives = 109/173 (63.01%), Query Frame = 0
Query: 2 GEDIPIPIHVKGKIETLNQAMGNFVRWHRQLVIMTDEKQENSTIRTVGYSSKYTDTNGTI 61
GE++ IP VKGKIETLNQA+GN + W R+LV + KQE ST + V YSS YTD NG I
Sbjct: 233 GENLTIPNPVKGKIETLNQALGNIIEWPRRLVSTINNKQEGSTRKDVVYSSNYTDVNGII 292
Query: 62 KLLNGHVVHNMKDVDMIHINLNEHIFENNKFVYLGRDDLMHFAVWLK-----LVRYV--- 121
KLLN H V+NMKDVDMI I +NE IF ++KFVYL R+DL+H+ L+ ++ Y+
Sbjct: 293 KLLNRHAVNNMKDVDMIRIPMNELIFGSDKFVYLAREDLLHYCGMLEIGYMCILAYITCL 352
Query: 122 --------------------YSHTLYLQSRNLANQLELANLEQLVLIPYNTGY 147
+ L+SRNLANQLE NLEQ VLIPYNTG+
Sbjct: 353 WDKCDCARNFFVIDQSKISSHIKDRDLRSRNLANQLEAVNLEQKVLIPYNTGF 405
BLAST of HG10021811 vs. ExPASy TrEMBL
Match:
A0A5A7UNJ8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold486G00760 PE=4 SV=1)
HSP 1 Score: 152.5 bits (384), Expect = 1.4e-33
Identity = 90/172 (52.33%), Postives = 109/172 (63.37%), Query Frame = 0
Query: 2 GEDIPIPIHVKGKIETLNQAMGNFVRWHRQLVIMTDEKQENSTIRTVGYSSKYTDTNGTI 61
GE++ IP VKGKIETLNQA+GN + W R+LV ++KQE+ST + V YSS YTD NG I
Sbjct: 46 GENLTIPNPVKGKIETLNQALGNIIEWPRRLVSTINDKQEHSTRKDVVYSSNYTDVNGII 105
Query: 62 KLLNGHVVHNMKDVDMIHINLNEHIFENNKFVYLGRDDLMHF----------------AV 121
KLLN H V+NMKDVDMI I +NE IF ++KFVYL R+DL+H+ +
Sbjct: 106 KLLNRHAVNNMKDVDMIRIPMNELIFGSDKFVYLAREDLLHYRGMVEIGYMCILAYITCL 165
Query: 122 WLKL----------VRYVYSH--TLYLQSRNLANQLELANLEQLVLIPYNTG 146
W K + SH L+SRNLANQLE NLEQ VLIPYNTG
Sbjct: 166 WDKCDCARNFFVIDQSKISSHIKDRDLRSRNLANQLEAVNLEQKVLIPYNTG 217
BLAST of HG10021811 vs. ExPASy TrEMBL
Match:
A0A5D3B7D0 (ULP_PROTEASE domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold110G00080 PE=3 SV=1)
HSP 1 Score: 152.1 bits (383), Expect = 1.9e-33
Identity = 86/173 (49.71%), Postives = 111/173 (64.16%), Query Frame = 0
Query: 2 GEDIPIPIHVKGKIETLNQAMGNFVRWHRQLVIMTDEKQENSTIRTVGYSSKYTDTNGTI 61
GE++ IP VKGKIETLNQA+GN + W R+LV M +EKQE+ST + V YSS YTD NG I
Sbjct: 242 GENLTIPNPVKGKIETLNQALGNIIEWPRRLVSMINEKQEHSTRKDVVYSSNYTDVNGMI 301
Query: 62 KLLNGHVVHNMKDVDMIHINLNEHIFENNKFVYLGRDDLMHFA-----VWLKLVRYV--- 121
KLLN H V+NMKDVDMI I +NE I ++KFVYL R+DL+H+ ++ ++ Y+
Sbjct: 302 KLLNRHAVNNMKDVDMIRIPMNELISGSDKFVYLAREDLLHYCGMVEISYMCILAYITCL 361
Query: 122 --------------------YSHTLYLQSRNLANQLELANLEQLVLIPYNTGY 147
+ L+S+NLANQLE NLEQ +LIPYNTG+
Sbjct: 362 WDKCDCARNFFVIDQSKISSHIKDRDLRSKNLANQLEAVNLEQKMLIPYNTGF 414
BLAST of HG10021811 vs. ExPASy TrEMBL
Match:
A0A5A7V8E5 (ULP_PROTEASE domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold977G00630 PE=3 SV=1)
HSP 1 Score: 152.1 bits (383), Expect = 1.9e-33
Identity = 86/173 (49.71%), Postives = 111/173 (64.16%), Query Frame = 0
Query: 2 GEDIPIPIHVKGKIETLNQAMGNFVRWHRQLVIMTDEKQENSTIRTVGYSSKYTDTNGTI 61
GE++ IP VKGKIETLNQA+GN + W R+LV M +EKQE+ST + V YSS YTD NG I
Sbjct: 638 GENLTIPNPVKGKIETLNQALGNIIEWPRRLVSMINEKQEHSTRKDVVYSSNYTDVNGMI 697
Query: 62 KLLNGHVVHNMKDVDMIHINLNEHIFENNKFVYLGRDDLMHFA-----VWLKLVRYV--- 121
KLLN H V+NMKDVDMI I +NE I ++KFVYL R+DL+H+ ++ ++ Y+
Sbjct: 698 KLLNRHAVNNMKDVDMIRIPMNELISGSDKFVYLAREDLLHYCGMVEISYMCILAYITCL 757
Query: 122 --------------------YSHTLYLQSRNLANQLELANLEQLVLIPYNTGY 147
+ L+S+NLANQLE NLEQ +LIPYNTG+
Sbjct: 758 WDKCDCARNFFVIDQSKISSHIKDRDLRSKNLANQLEAVNLEQKMLIPYNTGF 810
BLAST of HG10021811 vs. ExPASy TrEMBL
Match:
A0A5A7VKR6 (ULP_PROTEASE domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold2484G00030 PE=3 SV=1)
HSP 1 Score: 151.0 bits (380), Expect = 4.1e-33
Identity = 86/173 (49.71%), Postives = 109/173 (63.01%), Query Frame = 0
Query: 2 GEDIPIPIHVKGKIETLNQAMGNFVRWHRQLVIMTDEKQENSTIRTVGYSSKYTDTNGTI 61
GE++ IP VKGKIETLNQA+GN + W RQLV ++KQE+ST + V Y S YTD NG I
Sbjct: 352 GENLTIPNLVKGKIETLNQALGNIIEWPRQLVSTINDKQEHSTRKDVVYHSNYTDVNGII 411
Query: 62 KLLNGHVVHNMKDVDMIHINLNEHIFENNKFVYLGRDDLMHFA-----VWLKLVRYV--- 121
KLLN H V+NMKDVDMI I +NE IF ++KFVYL R+DL+H+ ++ ++ Y+
Sbjct: 412 KLLNRHAVNNMKDVDMIRIPMNELIFGSDKFVYLAREDLLHYCDMVEIGYMCILAYITCL 471
Query: 122 --------------------YSHTLYLQSRNLANQLELANLEQLVLIPYNTGY 147
+ L+ RNLANQLE NLEQ VLIPYNTG+
Sbjct: 472 WDKCDCARNFFVIDQSKISSHIKDRDLRPRNLANQLEAVNLEQKVLIPYNTGF 524
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| KAA0059922.1 | 1.3e-33 | 50.87 | 40S ribosomal protein S13-like [Cucumis melo var. makuwa] | [more] |
| KAA0056784.1 | 2.9e-33 | 52.33 | uncharacterized protein E6C27_scaffold486G00760 [Cucumis melo var. makuwa] | [more] |
| TYJ95752.1 | 3.8e-33 | 49.71 | uncharacterized protein E5676_scaffold110G00080 [Cucumis melo var. makuwa] | [more] |
| KAA0063474.1 | 3.8e-33 | 49.71 | uncharacterized protein E6C27_scaffold977G00630 [Cucumis melo var. makuwa] | [more] |
| KAA0067800.1 | 8.5e-33 | 49.71 | uncharacterized protein E6C27_scaffold2484G00030 [Cucumis melo var. makuwa] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A5A7UVK8 | 6.4e-34 | 50.87 | 40S ribosomal protein S13-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_s... | [more] |
| A0A5A7UNJ8 | 1.4e-33 | 52.33 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... | [more] |
| A0A5D3B7D0 | 1.9e-33 | 49.71 | ULP_PROTEASE domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN... | [more] |
| A0A5A7V8E5 | 1.9e-33 | 49.71 | ULP_PROTEASE domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN... | [more] |
| A0A5A7VKR6 | 4.1e-33 | 49.71 | ULP_PROTEASE domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
