HG10021809 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10021809
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	ran-binding protein 1 homolog a-like
Location	Chr05: 17027903 .. 17028530 (-)
RNA-Seq Expression	HG10021809
Synteny	HG10021809

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGACAACGAGGAGGTTCCGGAAAAGATGAAGACACTGGAGCTCAAGTCGCCCCGATCGTCAAGTTGGAGGCGGTTGACATTACCACCGGTGAAGAAGATGAGGACAATGTTCTCGATCTGTAGGCTTTTTCTCTACAATTCTTTCGCTATATCTTGTTTTTCTTGATCTACGTTTTCGTTCTTTAGTTTGACTTGTTTCGTTCCGATTATTCATTGTTTTAGGAAGGCAAAACTGAATCGATTCGATAAAGATGGAAACTAATGGAAGGAGAGGGGTGTTGGTACGGTTAAGTTTTTGAAACATAAGTAGACTGGAAAGGTTTGCCTTGTTATGAGACAGCCTAAGACGCTTAAGATCTGCACTAATCATCTTGGTTCGTTCTCGATTAAACCCATTATGCACATACAATTGAGTTCCTTTGAGTGCTTTAGTATACTGTTTGACTGTTGTGCTTTTGTAGTTCTTCCATCAATGATGGTTCAGGAACACGCGGGAAATGATAAATCGTGCGTGTGGCATGCGACTGACTTTGCTGATGGCGAATTGAAAGATGAGCTTTTCTGTATCAGATTCTCATCTATTGAGAGTGAGTACAATTTTCTAATTCTTTTTCCCCAAAATTAG

mRNA sequence

ATGAGACAACGAGGAGGTTCCGGAAAAGATGAAGACACTGGAGCTCAAGTCGCCCCGATCGTCAAGTTGGAGGCGGTTGACATTACCACCGGTGAAGAAGATGAGGACAATACTGGAAAGGTTTGCCTTGTTATGAGACAGCCTAAGACGCTTAAGATCTGCACTAATCATCTTGTTCTTCCATCAATGATGGTTCAGGAACACGCGGGAAATGATAAATCGTGCGTGTGGCATGCGACTGACTTTGCTGATGGCGAATTGAAAGATGAGCTTTTCTGTATCAGATTCTCATCTATTGAGAGTGAGTACAATTTTCTAATTCTTTTTCCCCAAAATTAG

Coding sequence (CDS)

ATGAGACAACGAGGAGGTTCCGGAAAAGATGAAGACACTGGAGCTCAAGTCGCCCCGATCGTCAAGTTGGAGGCGGTTGACATTACCACCGGTGAAGAAGATGAGGACAATACTGGAAAGGTTTGCCTTGTTATGAGACAGCCTAAGACGCTTAAGATCTGCACTAATCATCTTGTTCTTCCATCAATGATGGTTCAGGAACACGCGGGAAATGATAAATCGTGCGTGTGGCATGCGACTGACTTTGCTGATGGCGAATTGAAAGATGAGCTTTTCTGTATCAGATTCTCATCTATTGAGAGTGAGTACAATTTTCTAATTCTTTTTCCCCAAAATTAG

Protein sequence

MRQRGGSGKDEDTGAQVAPIVKLEAVDITTGEEDEDNTGKVCLVMRQPKTLKICTNHLVLPSMMVQEHAGNDKSCVWHATDFADGELKDELFCIRFSSIESEYNFLILFPQN

Homology

[Close]

BLAST of HG10021809 vs. NCBI nr
Match: XP_004145252.1 (ran-binding protein 1 homolog a [Cucumis sativus] >KGN65825.1 hypothetical protein Csa_023293 [Cucumis sativus])

HSP 1 Score: 163.3 bits (412), Expect = 1.2e-36
Identity = 87/138 (63.04%), Postives = 94/138 (68.12%), Query Frame = 0


Query: 7   SGKDEDTGAQVAPIVKLEAVDITTGEEDED------------------------------ 66
           +G+DEDTGAQVAPIVKLEAVD+TTGEEDED                              
Sbjct: 16  AGEDEDTGAQVAPIVKLEAVDVTTGEEDEDTVLDLKAKLYRFDKDGNQWKERGAGTVKFL 75

Query: 67  ---NTGKVCLVMRQPKTLKICTNHLVLPSMMVQEHAGNDKSCVWHATDFADGELKDELFC 112
               TGKV LVMRQ KTLKIC NHLVLPSM VQEHAGNDKSCVWHATDFADGELKDELFC
Sbjct: 76  KHKQTGKVRLVMRQSKTLKICANHLVLPSMTVQEHAGNDKSCVWHATDFADGELKDELFC 135

[Close]

BLAST of HG10021809 vs. NCBI nr
Match: GFZ19644.1 (pleckstrin homology (PH) domain superfamily protein [Actinidia rufa])

HSP 1 Score: 159.8 bits (403), Expect = 1.3e-35
Identity = 84/136 (61.76%), Postives = 93/136 (68.38%), Query Frame = 0


Query: 7   SGKDEDTGAQVAPIVKLEAVDITTGEEDEDN----------------------------- 66
           +G+DEDTGAQVAPIVKLE V +TTGEEDED+                             
Sbjct: 16  AGEDEDTGAQVAPIVKLEEVAVTTGEEDEDSILDLKSKLYRFDKDGNQWKERGAGTVKFL 75

Query: 67  ----TGKVCLVMRQPKTLKICTNHLVLPSMMVQEHAGNDKSCVWHATDFADGELKDELFC 110
               TGKV LVMRQ KTLKIC NHLVLP+M VQEHAGNDKSCVWHATDFADGELKDELFC
Sbjct: 76  KHKETGKVRLVMRQSKTLKICANHLVLPTMSVQEHAGNDKSCVWHATDFADGELKDELFC 135

[Close]

BLAST of HG10021809 vs. NCBI nr
Match: XP_023519268.1 (ran-binding protein 1 homolog a-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 156.0 bits (393), Expect = 1.9e-34
Identity = 84/138 (60.87%), Postives = 92/138 (66.67%), Query Frame = 0


Query: 7   SGKDEDTGAQVAPIVKLEAVDITTGEEDED------------------------------ 66
           +G+DEDTGAQVAPIVKLE V +TTGEE+ED                              
Sbjct: 16  AGEDEDTGAQVAPIVKLEEVVVTTGEENEDAVLDLKAKLYRFDKDGNQWKERGAGTVKFL 75

Query: 67  ---NTGKVCLVMRQPKTLKICTNHLVLPSMMVQEHAGNDKSCVWHATDFADGELKDELFC 112
               TGKV LVMRQ KTLKIC NHLVLPSM VQEHAGNDKSCVWHATDFADGELKDELFC
Sbjct: 76  KHKETGKVRLVMRQSKTLKICANHLVLPSMTVQEHAGNDKSCVWHATDFADGELKDELFC 135

[Close]

BLAST of HG10021809 vs. NCBI nr
Match: XP_022970594.1 (ran-binding protein 1 homolog a-like [Cucurbita maxima])

HSP 1 Score: 156.0 bits (393), Expect = 1.9e-34
Identity = 84/138 (60.87%), Postives = 92/138 (66.67%), Query Frame = 0


Query: 7   SGKDEDTGAQVAPIVKLEAVDITTGEEDED------------------------------ 66
           +G+DEDTGAQVAPIVKLE V +TTGEE+ED                              
Sbjct: 16  AGEDEDTGAQVAPIVKLEEVVVTTGEENEDAVLDLKAKLYRFDKDGNQWKERGAGTVKFL 75

Query: 67  ---NTGKVCLVMRQPKTLKICTNHLVLPSMMVQEHAGNDKSCVWHATDFADGELKDELFC 112
               TGKV LVMRQ KTLKIC NHLVLPSM VQEHAGNDKSCVWHATDFADGELKDELFC
Sbjct: 76  KHKETGKVRLVMRQSKTLKICANHLVLPSMTVQEHAGNDKSCVWHATDFADGELKDELFC 135

[Close]

BLAST of HG10021809 vs. NCBI nr
Match: KAG6583351.1 (Ran-binding protein 1-like c, partial [Cucurbita argyrosperma subsp. sororia] >KAG7019121.1 Ran-binding protein 1-like c [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 156.0 bits (393), Expect = 1.9e-34
Identity = 84/138 (60.87%), Postives = 92/138 (66.67%), Query Frame = 0


Query: 7   SGKDEDTGAQVAPIVKLEAVDITTGEEDED------------------------------ 66
           +G+DEDTGAQVAPIVKLE V +TTGEE+ED                              
Sbjct: 16  AGEDEDTGAQVAPIVKLEEVVVTTGEENEDAVLDLKAKLYRFDKDGNQWKERGAGTVKFL 75

Query: 67  ---NTGKVCLVMRQPKTLKICTNHLVLPSMMVQEHAGNDKSCVWHATDFADGELKDELFC 112
               TGKV LVMRQ KTLKIC NHLVLPSM VQEHAGNDKSCVWHATDFADGELKDELFC
Sbjct: 76  KHKETGKVRLVMRQSKTLKICANHLVLPSMTVQEHAGNDKSCVWHATDFADGELKDELFC 135

[Close]

BLAST of HG10021809 vs. ExPASy Swiss-Prot
Match: Q9LMK7 (Ran-binding protein 1 homolog a OS=Arabidopsis thaliana OX=3702 GN=RANBP1A PE=1 SV=1)

HSP 1 Score: 145.6 bits (366), Expect = 3.4e-34
Identity = 77/142 (54.23%), Postives = 88/142 (61.97%), Query Frame = 0


Query: 3   QRGGSGKDEDTGAQVAPIVKLEAVDITTGEEDED-------------------------- 62
           +  G+ +DEDTGAQVAPIV+LE V +TTGEEDED                          
Sbjct: 14  EEAGANEDEDTGAQVAPIVRLEEVAVTTGEEDEDAVLDLKSKLYRFDKDANQWKERGAGT 73

Query: 63  -------NTGKVCLVMRQPKTLKICTNHLVLPSMMVQEHAGNDKSCVWHATDFADGELKD 112
                  NTGK+ LVMRQ KTLKIC NH V   M VQEH GN+KSCVWHA DFADGELKD
Sbjct: 74  VKFLKHKNTGKIRLVMRQSKTLKICANHFVKSGMSVQEHVGNEKSCVWHARDFADGELKD 133

[Close]

BLAST of HG10021809 vs. ExPASy Swiss-Prot
Match: Q8RWG8 (Ran-binding protein 1 homolog b OS=Arabidopsis thaliana OX=3702 GN=RANBP1B PE=1 SV=2)

HSP 1 Score: 142.5 bits (358), Expect = 2.9e-33
Identity = 76/139 (54.68%), Postives = 88/139 (63.31%), Query Frame = 0


Query: 6   GSGKDEDTGAQVAPIVKLEAVDITTGEEDEDN---------------------------- 65
           G+ +DEDTGAQVAPIV+LE V +TTGEEDED                             
Sbjct: 19  GANEDEDTGAQVAPIVRLEEVAVTTGEEDEDTILDLKSKLYRFDKDGSQWKERGAGTVKF 78

Query: 66  -----TGKVCLVMRQPKTLKICTNHLVLPSMMVQEHAGNDKSCVWHATDFADGELKDELF 112
                +GK+ LVMRQ KTLKIC NHLV   M VQEHAGNDKSCVWHA DF+DGELKDELF
Sbjct: 79  LKHRVSGKIRLVMRQSKTLKICANHLVGSGMSVQEHAGNDKSCVWHARDFSDGELKDELF 138

[Close]

BLAST of HG10021809 vs. ExPASy Swiss-Prot
Match: P92985 (Ran-binding protein 1 homolog c OS=Arabidopsis thaliana OX=3702 GN=RANBP1C PE=2 SV=1)

HSP 1 Score: 113.6 bits (283), Expect = 1.4e-24
Identity = 52/74 (70.27%), Postives = 61/74 (82.43%), Query Frame = 0


Query: 38  TGKVCLVMRQPKTLKICTNHLVLPSMMVQEHAGNDKSCVWHATDFADGELKDELFCIRFS 97
           TGKV LVMRQ KTLKIC NHL+   M VQEH+GN+KSC+WHATDF+DGELKDELFCIRF+
Sbjct: 81  TGKVRLVMRQSKTLKICANHLISSGMSVQEHSGNEKSCLWHATDFSDGELKDELFCIRFA 140

Query: 98  SIESEYNFLILFPQ 112
           SIE+   F+  F +
Sbjct: 141 SIENCKTFMEKFTE 154

HSP 2 Score: 50.4 bits (119), Expect = 1.5e-05
Identity = 23/28 (82.14%), Postives = 26/28 (92.86%), Query Frame = 0


Query: 9  KDEDTGAQVAPIVKLEAVDITTGEEDED 37
          +DEDTGAQVAPIV+LE V +TTGEEDED
Sbjct: 19 EDEDTGAQVAPIVRLEEVAVTTGEEDED 46

[Close]

BLAST of HG10021809 vs. ExPASy Swiss-Prot
Match: Q9ERU9 (E3 SUMO-protein ligase RanBP2 OS=Mus musculus OX=10090 GN=Ranbp2 PE=1 SV=2)

HSP 1 Score: 76.6 bits (187), Expect = 1.9e-13
Identity = 48/143 (33.57%), Postives = 68/143 (47.55%), Query Frame = 0


Query: 5    GGS--GKDEDTGAQVAPIVKL-EAVDITTGEEDED------------------------- 64
            GGS  G +ED G    P+V L + +++ TGEEDE+                         
Sbjct: 1152 GGSAHGDEEDDGPHFEPVVPLPDKIEVKTGEEDEEEFFCNRAKLFRFDGESKEWKERGIG 1211

Query: 65   --------NTGKVCLVMRQPKTLKICTNHLVLPSMMVQEHAGNDKSCVWHATDFADGELK 112
                     +GK+ L+MR+ + LKIC NH + P M +  +AG+D+S VWHA D+AD   K
Sbjct: 1212 NVKILRHKTSGKIRLLMRREQVLKICANHYISPDMKLTPNAGSDRSFVWHALDYADELPK 1271

[Close]

BLAST of HG10021809 vs. ExPASy Swiss-Prot
Match: Q09717 (Ran-specific GTPase-activating protein 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=sbp1 PE=1 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 1.2e-10
Identity = 32/65 (49.23%), Postives = 45/65 (69.23%), Query Frame = 0


Query: 38  TGKVCLVMRQPKTLKICTNHLVLPSMMVQEHAGNDKSCVWH-ATDFADGELKDELFCIRF 97
           TGK  LVMR+ KTLK+C NHL++P M +  + G+D+S VW  A D ++GE   E F IRF
Sbjct: 129 TGKTRLVMRRDKTLKVCANHLLMPEMKLTPNVGSDRSWVWTVAADVSEGEPTAETFAIRF 188

Query: 98  SSIES 102
           ++ E+
Sbjct: 189 ANSEN 193

[Close]

BLAST of HG10021809 vs. ExPASy TrEMBL
Match: A0A0A0LV78 (RanBD1 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G532330 PE=4 SV=1)

HSP 1 Score: 163.3 bits (412), Expect = 5.8e-37
Identity = 87/138 (63.04%), Postives = 94/138 (68.12%), Query Frame = 0


Query: 7   SGKDEDTGAQVAPIVKLEAVDITTGEEDED------------------------------ 66
           +G+DEDTGAQVAPIVKLEAVD+TTGEEDED                              
Sbjct: 16  AGEDEDTGAQVAPIVKLEAVDVTTGEEDEDTVLDLKAKLYRFDKDGNQWKERGAGTVKFL 75

Query: 67  ---NTGKVCLVMRQPKTLKICTNHLVLPSMMVQEHAGNDKSCVWHATDFADGELKDELFC 112
               TGKV LVMRQ KTLKIC NHLVLPSM VQEHAGNDKSCVWHATDFADGELKDELFC
Sbjct: 76  KHKQTGKVRLVMRQSKTLKICANHLVLPSMTVQEHAGNDKSCVWHATDFADGELKDELFC 135

[Close]

BLAST of HG10021809 vs. ExPASy TrEMBL
Match: A0A7J0HA86 (Pleckstrin homology (PH) domain superfamily protein OS=Actinidia rufa OX=165716 GN=Acr_28g0003490 PE=4 SV=1)

HSP 1 Score: 159.8 bits (403), Expect = 6.4e-36
Identity = 84/136 (61.76%), Postives = 93/136 (68.38%), Query Frame = 0


Query: 7   SGKDEDTGAQVAPIVKLEAVDITTGEEDEDN----------------------------- 66
           +G+DEDTGAQVAPIVKLE V +TTGEEDED+                             
Sbjct: 16  AGEDEDTGAQVAPIVKLEEVAVTTGEEDEDSILDLKSKLYRFDKDGNQWKERGAGTVKFL 75

Query: 67  ----TGKVCLVMRQPKTLKICTNHLVLPSMMVQEHAGNDKSCVWHATDFADGELKDELFC 110
               TGKV LVMRQ KTLKIC NHLVLP+M VQEHAGNDKSCVWHATDFADGELKDELFC
Sbjct: 76  KHKETGKVRLVMRQSKTLKICANHLVLPTMSVQEHAGNDKSCVWHATDFADGELKDELFC 135

[Close]

BLAST of HG10021809 vs. ExPASy TrEMBL
Match: A0A6J1I618 (ran-binding protein 1 homolog a-like OS=Cucurbita maxima OX=3661 GN=LOC111469535 PE=4 SV=1)

HSP 1 Score: 156.0 bits (393), Expect = 9.3e-35
Identity = 84/138 (60.87%), Postives = 92/138 (66.67%), Query Frame = 0


Query: 7   SGKDEDTGAQVAPIVKLEAVDITTGEEDED------------------------------ 66
           +G+DEDTGAQVAPIVKLE V +TTGEE+ED                              
Sbjct: 16  AGEDEDTGAQVAPIVKLEEVVVTTGEENEDAVLDLKAKLYRFDKDGNQWKERGAGTVKFL 75

Query: 67  ---NTGKVCLVMRQPKTLKICTNHLVLPSMMVQEHAGNDKSCVWHATDFADGELKDELFC 112
               TGKV LVMRQ KTLKIC NHLVLPSM VQEHAGNDKSCVWHATDFADGELKDELFC
Sbjct: 76  KHKETGKVRLVMRQSKTLKICANHLVLPSMTVQEHAGNDKSCVWHATDFADGELKDELFC 135

[Close]

BLAST of HG10021809 vs. ExPASy TrEMBL
Match: A0A6J1HM04 (ran-binding protein 1 homolog a-like OS=Cucurbita moschata OX=3662 GN=LOC111464836 PE=4 SV=1)

HSP 1 Score: 156.0 bits (393), Expect = 9.3e-35
Identity = 84/138 (60.87%), Postives = 92/138 (66.67%), Query Frame = 0


Query: 7   SGKDEDTGAQVAPIVKLEAVDITTGEEDED------------------------------ 66
           +G+DEDTGAQVAPIVKLE V +TTGEE+ED                              
Sbjct: 16  AGEDEDTGAQVAPIVKLEEVVVTTGEENEDAVLDLKAKLYRFDKDGNQWKERGAGTVKFL 75

Query: 67  ---NTGKVCLVMRQPKTLKICTNHLVLPSMMVQEHAGNDKSCVWHATDFADGELKDELFC 112
               TGKV LVMRQ KTLKIC NHLVLPSM VQEHAGNDKSCVWHATDFADGELKDELFC
Sbjct: 76  KHKETGKVRLVMRQSKTLKICANHLVLPSMTVQEHAGNDKSCVWHATDFADGELKDELFC 135

[Close]

BLAST of HG10021809 vs. ExPASy TrEMBL
Match: A0A5B7BFU3 (Putative Ran-binding protein 1-b-like protein (Fragment) OS=Davidia involucrata OX=16924 GN=Din_035982 PE=4 SV=1)

HSP 1 Score: 154.8 bits (390), Expect = 2.1e-34
Identity = 80/138 (57.97%), Postives = 92/138 (66.67%), Query Frame = 0


Query: 7   SGKDEDTGAQVAPIVKLEAVDITTGEEDED------------------------------ 66
           +G+DEDTGAQVAPIV+LE V + TGEEDED                              
Sbjct: 54  TGEDEDTGAQVAPIVRLEEVSVATGEEDEDPILDLKSKLYRFDKEGNQWKERGAGTLKLL 113

Query: 67  ---NTGKVCLVMRQPKTLKICTNHLVLPSMMVQEHAGNDKSCVWHATDFADGELKDELFC 112
               TGKV LVMRQ KTLKIC NHLVLP+M VQEH+GNDKSCVWHATDFADGELKDELFC
Sbjct: 114 KHKETGKVRLVMRQSKTLKICANHLVLPTMTVQEHSGNDKSCVWHATDFADGELKDELFC 173

[Close]

BLAST of HG10021809 vs. TAIR 10
Match: AT1G07140.1 (Pleckstrin homology (PH) domain superfamily protein )

HSP 1 Score: 145.6 bits (366), Expect = 2.4e-35
Identity = 77/142 (54.23%), Postives = 88/142 (61.97%), Query Frame = 0


Query: 3   QRGGSGKDEDTGAQVAPIVKLEAVDITTGEEDED-------------------------- 62
           +  G+ +DEDTGAQVAPIV+LE V +TTGEEDED                          
Sbjct: 14  EEAGANEDEDTGAQVAPIVRLEEVAVTTGEEDEDAVLDLKSKLYRFDKDANQWKERGAGT 73

Query: 63  -------NTGKVCLVMRQPKTLKICTNHLVLPSMMVQEHAGNDKSCVWHATDFADGELKD 112
                  NTGK+ LVMRQ KTLKIC NH V   M VQEH GN+KSCVWHA DFADGELKD
Sbjct: 74  VKFLKHKNTGKIRLVMRQSKTLKICANHFVKSGMSVQEHVGNEKSCVWHARDFADGELKD 133

[Close]

BLAST of HG10021809 vs. TAIR 10
Match: AT2G30060.1 (Pleckstrin homology (PH) domain superfamily protein )

HSP 1 Score: 142.5 bits (358), Expect = 2.0e-34
Identity = 76/139 (54.68%), Postives = 88/139 (63.31%), Query Frame = 0


Query: 6   GSGKDEDTGAQVAPIVKLEAVDITTGEEDEDN---------------------------- 65
           G+ +DEDTGAQVAPIV+LE V +TTGEEDED                             
Sbjct: 19  GANEDEDTGAQVAPIVRLEEVAVTTGEEDEDTILDLKSKLYRFDKDGSQWKERGAGTVKF 78

Query: 66  -----TGKVCLVMRQPKTLKICTNHLVLPSMMVQEHAGNDKSCVWHATDFADGELKDELF 112
                +GK+ LVMRQ KTLKIC NHLV   M VQEHAGNDKSCVWHA DF+DGELKDELF
Sbjct: 79  LKHRVSGKIRLVMRQSKTLKICANHLVGSGMSVQEHAGNDKSCVWHARDFSDGELKDELF 138

[Close]

BLAST of HG10021809 vs. TAIR 10
Match: AT5G58590.1 (RAN binding protein 1 )

HSP 1 Score: 113.6 bits (283), Expect = 1.0e-25
Identity = 52/74 (70.27%), Postives = 61/74 (82.43%), Query Frame = 0


Query: 38  TGKVCLVMRQPKTLKICTNHLVLPSMMVQEHAGNDKSCVWHATDFADGELKDELFCIRFS 97
           TGKV LVMRQ KTLKIC NHL+   M VQEH+GN+KSC+WHATDF+DGELKDELFCIRF+
Sbjct: 81  TGKVRLVMRQSKTLKICANHLISSGMSVQEHSGNEKSCLWHATDFSDGELKDELFCIRFA 140

Query: 98  SIESEYNFLILFPQ 112
           SIE+   F+  F +
Sbjct: 141 SIENCKTFMEKFTE 154

HSP 2 Score: 50.4 bits (119), Expect = 1.1e-06
Identity = 23/28 (82.14%), Postives = 26/28 (92.86%), Query Frame = 0


Query: 9  KDEDTGAQVAPIVKLEAVDITTGEEDED 37
          +DEDTGAQVAPIV+LE V +TTGEEDED
Sbjct: 19 EDEDTGAQVAPIVRLEEVAVTTGEEDED 46

The following BLAST results are available for this feature:

BLAST of HG10021809 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004145252.1	1.2e-36	63.04	ran-binding protein 1 homolog a [Cucumis sativus] >KGN65825.1 hypothetical prote...	[more]
GFZ19644.1	1.3e-35	61.76	pleckstrin homology (PH) domain superfamily protein [Actinidia rufa]	[more]
XP_023519268.1	1.9e-34	60.87	ran-binding protein 1 homolog a-like [Cucurbita pepo subsp. pepo]	[more]
XP_022970594.1	1.9e-34	60.87	ran-binding protein 1 homolog a-like [Cucurbita maxima]	[more]
KAG6583351.1	1.9e-34	60.87	Ran-binding protein 1-like c, partial [Cucurbita argyrosperma subsp. sororia] >K...	[more]

BLAST of HG10021809 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LMK7	3.4e-34	54.23	Ran-binding protein 1 homolog a OS=Arabidopsis thaliana OX=3702 GN=RANBP1A PE=1 ...	[more]
Q8RWG8	2.9e-33	54.68	Ran-binding protein 1 homolog b OS=Arabidopsis thaliana OX=3702 GN=RANBP1B PE=1 ...	[more]
P92985	1.4e-24	70.27	Ran-binding protein 1 homolog c OS=Arabidopsis thaliana OX=3702 GN=RANBP1C PE=2 ...	[more]
Q9ERU9	1.9e-13	33.57	E3 SUMO-protein ligase RanBP2 OS=Mus musculus OX=10090 GN=Ranbp2 PE=1 SV=2	[more]
Q09717	1.2e-10	49.23	Ran-specific GTPase-activating protein 1 OS=Schizosaccharomyces pombe (strain 97...	[more]

BLAST of HG10021809 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LV78	5.8e-37	63.04	RanBD1 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G532330 PE=4...	[more]
A0A7J0HA86	6.4e-36	61.76	Pleckstrin homology (PH) domain superfamily protein OS=Actinidia rufa OX=165716 ...	[more]
A0A6J1I618	9.3e-35	60.87	ran-binding protein 1 homolog a-like OS=Cucurbita maxima OX=3661 GN=LOC111469535...	[more]
A0A6J1HM04	9.3e-35	60.87	ran-binding protein 1 homolog a-like OS=Cucurbita moschata OX=3662 GN=LOC1114648...	[more]
A0A5B7BFU3	2.1e-34	57.97	Putative Ran-binding protein 1-b-like protein (Fragment) OS=Davidia involucrata ...	[more]

BLAST of HG10021809 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G07140.1	2.4e-35	54.23	Pleckstrin homology (PH) domain superfamily protein	[more]
AT2G30060.1	2.0e-34	54.68	Pleckstrin homology (PH) domain superfamily protein	[more]
AT5G58590.1	1.0e-25	70.27	RAN binding protein 1	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000156	Ran binding domain	SMART	SM00160	ranbd_3	coord: 17..112 e-value: 6.8E-7 score: 18.3
IPR000156	Ran binding domain	PFAM	PF00638	Ran_BP1	coord: 36..105 e-value: 1.7E-15 score: 57.3
IPR000156	Ran binding domain	PROSITE	PS50196	RANBD1	coord: 33..112 score: 14.282294
IPR011993	PH-like domain superfamily	GENE3D	2.30.29.30		coord: 36..111 e-value: 1.0E-18 score: 69.3
None	No IPR available	PANTHER	PTHR23138:SF156	RAN-BINDING PROTEIN 1 HOMOLOG C-LIKE	coord: 8..37
None	No IPR available	PANTHER	PTHR23138	RAN BINDING PROTEIN	coord: 8..37
None	No IPR available	PANTHER	PTHR23138	RAN BINDING PROTEIN	coord: 37..109
None	No IPR available	PANTHER	PTHR23138:SF156	RAN-BINDING PROTEIN 1 HOMOLOG C-LIKE	coord: 37..109
None	No IPR available	SUPERFAMILY	50729	PH domain-like	coord: 15..101

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10021809.1	HG10021809.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0046907	intracellular transport
cellular_component	GO:0005622	intracellular anatomical structure