HG10021796 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview
NameHG10021796
Typegene
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionRab3 GTPase-activating protein catalytic subunit
LocationChr05: 16846861 .. 16849589 (-)
RNA-Seq ExpressionHG10021796
SyntenyHG10021796
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCAGCATTTAAAGCTGCAAATCCTGATGGTGTCTTTGAAGATTTTATTCGGTGGCATTCACCTGGGGATTGGGAGGAGGATTCTGATCCCATGGACGAGGATTTACCCCCTGGCTCGGCGACAGAAGCTTTGAAAAACAATTGGCCTCCTCAAGGACATCTTTCAAAACGAATGTCCGAGCATGGGAATTTATGGCGACAACTATGGAATGATGCACCTGCCTTGCCCGTTTCTGAACAGAAGTCACTGCTGGATCCAAATAGAGAAGGGGAAAAGGTATATTCATTAGATATATGACGGAGCCAATTTTTTATGTTTTGTGAATTTTGAAAGATTGTGGTTGGGGAGATAAGATGTATCATCGTAGAATGGGAACAATTTAGGATTTCTAGAGTCACTTTCAAGTTTCTAAGGATTTATGACAACCAAATCATCAGTAAAATTCTTAGGTATTAGCAGCTCCATCCAAATTGCACACCAATTTTACATTTATTATTTGGTCTACAACCAAGTTTAATGAAGTTCAAGAAGAACCCATAAGTAGCTTCAAAAGGTTAAGGAGAGGCCAACCTTGGCAACTTTAGCATAGCCGCTGATTTGAGTTAAGCTGGAGAATGGTTCAAGTACTATTACTAATTTAAACGTGGACTTCAGTTAATGCACTTTAACCAAACTAATTTGCTGTAGTTTCTTATAATCAAAACAACTGCATGTGTGCGTGTGGATTGTGGAAAATAGGAAGCTGTAATTTCATAGCAGTACTAGTGAGTTTGACTATGTATACACCCAAACCCTGTACTTCCATTGTGTACATATTCGTTGTTCATGACTCCTGGAATTCTGCAGATTCTCCACTATCTGGAGACATTACGACCACATCAATTACTTGAGCAAATGGTTTGTACTGCCTTTAAAGCTGCAGCAGATACATTAAGCCAGACTAGCTATGGAGGATTGAAGCTGATGAAAACAAAAATGGAGCAACTTTATTGTACTATGGCGTCTGTTTTGAAGTTCTTGCAAGGTAGACAAATGCATAATCGTGATCTTCATGTTTTTTTATTATAGTCGTTTTGCTTTGAATCCCATGTTTATGTCATGTAAGTATACTGCAGGAAATTGTTTGTCTGCTGAGAGTGAGGTTATTGATGACCTAAGACGGCTATGTGTTGTTTTTGAACATGTGGAGAAGTTGATGGCTCTTGCAGCTTCTCTTCATCGTAAATTGTCACAGGCACCTCGTCTGTCTGAAGTGATTTTCAAAGACTATTACGACTTTTACATGCCAAGAATGGGAACTGGCTCGTCAGTCAGCAAATTTGAAACGGTAATCACTTACTAGATTTTTCTGAGAAAAAGTGCATTATGCTTGAGAAAATTTTCCATATAGGAGAATACTAGAATATCATTATAATGATTTCTTTCTTATAAAAAAAGGTTTATCAAATTTAGGCTAAATATATACTTTAATGTTGAGGAAAATTACTATAAACAGAAAAAATATCAAACTATTTACAAATATAGAAAAATTTCACTGTCTATCAGTGATAGACCGCGATAGAATTCTATCGCTTTCTATCGCTCAAGCAAATGAATTCTATCGCTTGAGCGATAGAAAGCGATAGAATTCTATCACAATCTATCATTGATAGACTGTAAATTTTTTCTATATTTGTAAATAGTTTGGCTAATTTTTCTATATTTGAAAAGAGCCCTAATGTTTAGGTAATCCTTTTAGTGTAGTTCTATTATTTAAAATGTTTCAAATTAGTCGCTTATATACAAAGGCTTTTAATTTAGTCCCTACTGTTGAAAAGTTTGCTAATGATGACTTACATGGCACAGTACTAAGGAAATAAAAAAAGAATTTAGGAAAAGAAAATTCGAAACTTCTACCAATTTAAAGAAATTTAGGGGAGGAATTTGAATCATTTTTCCTCTGAATTTTCACTATGCAGTAAAATTTAAAGAAATTTAGGGTGAATCATTGAATCATTTTTCCTCTGAATTTTCACTATGCAGTAAAAGTTTATCGGTCAACTAATTTAATTTTTTTTCAAAAGTGTGGGACTAGATTGAAAAAATACCCGAACTTTAAGGACAGGTGAAAAGTTGCTATTTAGAAATTAATGATTTAATTGAAAAAAATTCTCTTTTACTATAATCCTGTTTATCACTCTACTATATATGTATGCAATGGAGATTTTTTTTGGGGGACAATTTTAAGTCTTGTTTGTTAATAGTTAATAATCGAGTGATTGAACACATATTTAGCCTCCAATTTAATATATAGGAAAAACCTTTCCAGTTAAAGTTGAATCTACCCTTGCTCTTGTTATGTCGGTCAAAGCCGTGATCGTCCTGGATAACTATTTTGAAGCTCAGCTGGAGCCTGGGACTGACTTTCATTTCTATATATGTATCATTCTTAGGAGTTTAACAAAAAGCAGCTAGTAAGAACCCATGAAAGAGGAGTGATATCAAGCATGTTCCCTCCTCCAACCTCCAGTCAATTATGGAGGAAGGTTTTGAGCATGGGTAACCTTTTCAATGGCCACGAACCAATCCTCAGGGAGATTGTCTTTTCATTGCAAGATCGTGTCAATGGAAACCATTATGCAGACTCTACTCCTGCAGCTCGAGAAGAAATAGACACACATCGAATGTATATAAACGGTACTTCTAACGATCTCCGCGTAGCTCTCTCTGTCACTTCATGCGATTAA

mRNA sequence

ATGTCAGCATTTAAAGCTGCAAATCCTGATGGTGTCTTTGAAGATTTTATTCGGTGGCATTCACCTGGGGATTGGGAGGAGGATTCTGATCCCATGGACGAGGATTTACCCCCTGGCTCGGCGACAGAAGCTTTGAAAAACAATTGGCCTCCTCAAGGACATCTTTCAAAACGAATGTCCGAGCATGGGAATTTATGGCGACAACTATGGAATGATGCACCTGCCTTGCCCGTTTCTGAACAGAAGTCACTGCTGGATCCAAATAGAGAAGGGGAAAAGATTCTCCACTATCTGGAGACATTACGACCACATCAATTACTTGAGCAAATGGTTTGTACTGCCTTTAAAGCTGCAGCAGATACATTAAGCCAGACTAGCTATGGAGGATTGAAGCTGATGAAAACAAAAATGGAGCAACTTTATTGTACTATGGCGTCTGTTTTGAAGTTCTTGCAAGGAAATTGTTTGTCTGCTGAGAGTGAGGTTATTGATGACCTAAGACGGCTATGTGTTGTTTTTGAACATGTGGAGAAGTTGATGGCTCTTGCAGCTTCTCTTCATCGTAAATTGTCACAGGCACCTCGTCTGTCTGAAGTGATTTTCAAAGACTATTACGACTTTTACATGCCAAGAATGGGAACTGGCTCGTCAGTCAGCAAATTTGAAACGGAGTTTAACAAAAAGCAGCTAGTAAGAACCCATGAAAGAGGAGTGATATCAAGCATGTTCCCTCCTCCAACCTCCAGTCAATTATGGAGGAAGGTTTTGAGCATGGGTAACCTTTTCAATGGCCACGAACCAATCCTCAGGGAGATTGTCTTTTCATTGCAAGATCGTGTCAATGGAAACCATTATGCAGACTCTACTCCTGCAGCTCGAGAAGAAATAGACACACATCGAATGTATATAAACGGTACTTCTAACGATCTCCGCGTAGCTCTCTCTGTCACTTCATGCGATTAA

Coding sequence (CDS)

ATGTCAGCATTTAAAGCTGCAAATCCTGATGGTGTCTTTGAAGATTTTATTCGGTGGCATTCACCTGGGGATTGGGAGGAGGATTCTGATCCCATGGACGAGGATTTACCCCCTGGCTCGGCGACAGAAGCTTTGAAAAACAATTGGCCTCCTCAAGGACATCTTTCAAAACGAATGTCCGAGCATGGGAATTTATGGCGACAACTATGGAATGATGCACCTGCCTTGCCCGTTTCTGAACAGAAGTCACTGCTGGATCCAAATAGAGAAGGGGAAAAGATTCTCCACTATCTGGAGACATTACGACCACATCAATTACTTGAGCAAATGGTTTGTACTGCCTTTAAAGCTGCAGCAGATACATTAAGCCAGACTAGCTATGGAGGATTGAAGCTGATGAAAACAAAAATGGAGCAACTTTATTGTACTATGGCGTCTGTTTTGAAGTTCTTGCAAGGAAATTGTTTGTCTGCTGAGAGTGAGGTTATTGATGACCTAAGACGGCTATGTGTTGTTTTTGAACATGTGGAGAAGTTGATGGCTCTTGCAGCTTCTCTTCATCGTAAATTGTCACAGGCACCTCGTCTGTCTGAAGTGATTTTCAAAGACTATTACGACTTTTACATGCCAAGAATGGGAACTGGCTCGTCAGTCAGCAAATTTGAAACGGAGTTTAACAAAAAGCAGCTAGTAAGAACCCATGAAAGAGGAGTGATATCAAGCATGTTCCCTCCTCCAACCTCCAGTCAATTATGGAGGAAGGTTTTGAGCATGGGTAACCTTTTCAATGGCCACGAACCAATCCTCAGGGAGATTGTCTTTTCATTGCAAGATCGTGTCAATGGAAACCATTATGCAGACTCTACTCCTGCAGCTCGAGAAGAAATAGACACACATCGAATGTATATAAACGGTACTTCTAACGATCTCCGCGTAGCTCTCTCTGTCACTTCATGCGATTAA

Protein sequence

MSAFKAANPDGVFEDFIRWHSPGDWEEDSDPMDEDLPPGSATEALKNNWPPQGHLSKRMSEHGNLWRQLWNDAPALPVSEQKSLLDPNREGEKILHYLETLRPHQLLEQMVCTAFKAAADTLSQTSYGGLKLMKTKMEQLYCTMASVLKFLQGNCLSAESEVIDDLRRLCVVFEHVEKLMALAASLHRKLSQAPRLSEVIFKDYYDFYMPRMGTGSSVSKFETEFNKKQLVRTHERGVISSMFPPPTSSQLWRKVLSMGNLFNGHEPILREIVFSLQDRVNGNHYADSTPAAREEIDTHRMYINGTSNDLRVALSVTSCD
Homology
[Close]
BLAST of HG10021796 vs. NCBI nr
Match: XP_038894474.1 (rab3 GTPase-activating protein catalytic subunit isoform X3 [Benincasa hispida])

HSP 1 Score: 609.4 bits (1570), Expect = 1.8e-170
Identity = 301/321 (93.77%), Postives = 307/321 (95.64%), Query Frame = 0 

Query: 1   MSAFKAANPDGVFEDFIRWHSPGDWEEDSDPMDEDLPPGSATEALKNNWPPQGHLSKRMS 60
           MSAFKAANPDGVFEDFIRWHSPGDWEEDS P DEDLP GSATE  KNNWPP+GHLSKRMS
Sbjct: 634 MSAFKAANPDGVFEDFIRWHSPGDWEEDSGPEDEDLPHGSATETSKNNWPPRGHLSKRMS 693

Query: 61  EHGNLWRQLWNDAPALPVSEQKSLLDPNREGEKILHYLETLRPHQLLEQMVCTAFKAAAD 120
           EHGNLWRQLWNDAPALPVSEQKSLLDPNREGEKILHYLETLRPHQLLEQMVCTAF AAAD
Sbjct: 694 EHGNLWRQLWNDAPALPVSEQKSLLDPNREGEKILHYLETLRPHQLLEQMVCTAFNAAAD 753

Query: 121 TLSQTSYGGLKLMKTKMEQLYCTMASVLKFLQGNCLSAESEVIDDLRRLCVVFEHVEKLM 180
           TLSQTSYGGLKLMKTKMEQLYCTMASVLKFLQGN LSAESEVIDDLRRLCVVFEHVEKLM
Sbjct: 754 TLSQTSYGGLKLMKTKMEQLYCTMASVLKFLQGNRLSAESEVIDDLRRLCVVFEHVEKLM 813

Query: 181 ALAASLHRKLSQAPRLSEVIFKDYYDFYMPRMGTGSSVSKFETEFNKKQLVRTHERGVIS 240
           ALAASL+RKLSQAPRLSE+IFKDYYDFY+PRMGTGSS SKF TEFNKKQLVR HERGVIS
Sbjct: 814 ALAASLYRKLSQAPRLSEMIFKDYYDFYLPRMGTGSSGSKFGTEFNKKQLVRNHERGVIS 873

Query: 241 SMFPPPTSSQLWRKVLSMGNLFNGHEPILREIVFSLQDRVNGNHYADSTPAAR-EEIDTH 300
           SMF PPT+SQ WRKVLSMGNLFNGHEPILREIVFSL+DRVNGNHYADSTP AR EEIDTH
Sbjct: 874 SMFTPPTASQSWRKVLSMGNLFNGHEPILREIVFSLRDRVNGNHYADSTPTAREEEIDTH 933

Query: 301 RMYINGTSNDLRVALSVTSCD 321
           RMYINGTSNDLRVALSVTSCD
Sbjct: 934 RMYINGTSNDLRVALSVTSCD 954

[Close]
BLAST of HG10021796 vs. NCBI nr
Match: XP_038894473.1 (rab3 GTPase-activating protein catalytic subunit isoform X2 [Benincasa hispida])

HSP 1 Score: 609.4 bits (1570), Expect = 1.8e-170
Identity = 301/321 (93.77%), Postives = 307/321 (95.64%), Query Frame = 0 

Query: 1   MSAFKAANPDGVFEDFIRWHSPGDWEEDSDPMDEDLPPGSATEALKNNWPPQGHLSKRMS 60
           MSAFKAANPDGVFEDFIRWHSPGDWEEDS P DEDLP GSATE  KNNWPP+GHLSKRMS
Sbjct: 640 MSAFKAANPDGVFEDFIRWHSPGDWEEDSGPEDEDLPHGSATETSKNNWPPRGHLSKRMS 699

Query: 61  EHGNLWRQLWNDAPALPVSEQKSLLDPNREGEKILHYLETLRPHQLLEQMVCTAFKAAAD 120
           EHGNLWRQLWNDAPALPVSEQKSLLDPNREGEKILHYLETLRPHQLLEQMVCTAF AAAD
Sbjct: 700 EHGNLWRQLWNDAPALPVSEQKSLLDPNREGEKILHYLETLRPHQLLEQMVCTAFNAAAD 759

Query: 121 TLSQTSYGGLKLMKTKMEQLYCTMASVLKFLQGNCLSAESEVIDDLRRLCVVFEHVEKLM 180
           TLSQTSYGGLKLMKTKMEQLYCTMASVLKFLQGN LSAESEVIDDLRRLCVVFEHVEKLM
Sbjct: 760 TLSQTSYGGLKLMKTKMEQLYCTMASVLKFLQGNRLSAESEVIDDLRRLCVVFEHVEKLM 819

Query: 181 ALAASLHRKLSQAPRLSEVIFKDYYDFYMPRMGTGSSVSKFETEFNKKQLVRTHERGVIS 240
           ALAASL+RKLSQAPRLSE+IFKDYYDFY+PRMGTGSS SKF TEFNKKQLVR HERGVIS
Sbjct: 820 ALAASLYRKLSQAPRLSEMIFKDYYDFYLPRMGTGSSGSKFGTEFNKKQLVRNHERGVIS 879

Query: 241 SMFPPPTSSQLWRKVLSMGNLFNGHEPILREIVFSLQDRVNGNHYADSTPAAR-EEIDTH 300
           SMF PPT+SQ WRKVLSMGNLFNGHEPILREIVFSL+DRVNGNHYADSTP AR EEIDTH
Sbjct: 880 SMFTPPTASQSWRKVLSMGNLFNGHEPILREIVFSLRDRVNGNHYADSTPTAREEEIDTH 939

Query: 301 RMYINGTSNDLRVALSVTSCD 321
           RMYINGTSNDLRVALSVTSCD
Sbjct: 940 RMYINGTSNDLRVALSVTSCD 960

[Close]
BLAST of HG10021796 vs. NCBI nr
Match: XP_038894472.1 (rab3 GTPase-activating protein catalytic subunit isoform X1 [Benincasa hispida])

HSP 1 Score: 609.4 bits (1570), Expect = 1.8e-170
Identity = 301/321 (93.77%), Postives = 307/321 (95.64%), Query Frame = 0 

Query: 1   MSAFKAANPDGVFEDFIRWHSPGDWEEDSDPMDEDLPPGSATEALKNNWPPQGHLSKRMS 60
           MSAFKAANPDGVFEDFIRWHSPGDWEEDS P DEDLP GSATE  KNNWPP+GHLSKRMS
Sbjct: 644 MSAFKAANPDGVFEDFIRWHSPGDWEEDSGPEDEDLPHGSATETSKNNWPPRGHLSKRMS 703

Query: 61  EHGNLWRQLWNDAPALPVSEQKSLLDPNREGEKILHYLETLRPHQLLEQMVCTAFKAAAD 120
           EHGNLWRQLWNDAPALPVSEQKSLLDPNREGEKILHYLETLRPHQLLEQMVCTAF AAAD
Sbjct: 704 EHGNLWRQLWNDAPALPVSEQKSLLDPNREGEKILHYLETLRPHQLLEQMVCTAFNAAAD 763

Query: 121 TLSQTSYGGLKLMKTKMEQLYCTMASVLKFLQGNCLSAESEVIDDLRRLCVVFEHVEKLM 180
           TLSQTSYGGLKLMKTKMEQLYCTMASVLKFLQGN LSAESEVIDDLRRLCVVFEHVEKLM
Sbjct: 764 TLSQTSYGGLKLMKTKMEQLYCTMASVLKFLQGNRLSAESEVIDDLRRLCVVFEHVEKLM 823

Query: 181 ALAASLHRKLSQAPRLSEVIFKDYYDFYMPRMGTGSSVSKFETEFNKKQLVRTHERGVIS 240
           ALAASL+RKLSQAPRLSE+IFKDYYDFY+PRMGTGSS SKF TEFNKKQLVR HERGVIS
Sbjct: 824 ALAASLYRKLSQAPRLSEMIFKDYYDFYLPRMGTGSSGSKFGTEFNKKQLVRNHERGVIS 883

Query: 241 SMFPPPTSSQLWRKVLSMGNLFNGHEPILREIVFSLQDRVNGNHYADSTPAAR-EEIDTH 300
           SMF PPT+SQ WRKVLSMGNLFNGHEPILREIVFSL+DRVNGNHYADSTP AR EEIDTH
Sbjct: 884 SMFTPPTASQSWRKVLSMGNLFNGHEPILREIVFSLRDRVNGNHYADSTPTAREEEIDTH 943

Query: 301 RMYINGTSNDLRVALSVTSCD 321
           RMYINGTSNDLRVALSVTSCD
Sbjct: 944 RMYINGTSNDLRVALSVTSCD 964

[Close]
BLAST of HG10021796 vs. NCBI nr
Match: XP_011658733.1 (rab3 GTPase-activating protein catalytic subunit isoform X1 [Cucumis sativus] >KGN65835.1 hypothetical protein Csa_023299 [Cucumis sativus])

HSP 1 Score: 600.5 bits (1547), Expect = 8.4e-168
Identity = 295/321 (91.90%), Postives = 307/321 (95.64%), Query Frame = 0 

Query: 1   MSAFKAANPDGVFEDFIRWHSPGDWEEDSDPMDEDLPPGSATEALKNNWPPQGHLSKRMS 60
           MSAFKAANPDGVFEDFIRWHSPGDWEE+S P DEDLP  SATE  KNNWPP+GHLSKRMS
Sbjct: 633 MSAFKAANPDGVFEDFIRWHSPGDWEEESGPKDEDLPDSSATETSKNNWPPRGHLSKRMS 692

Query: 61  EHGNLWRQLWNDAPALPVSEQKSLLDPNREGEKILHYLETLRPHQLLEQMVCTAFKAAAD 120
           EHGNLWRQLWNDAPALPVSEQKSLLDPNREGEKILHYLETLRPHQLLEQMVCT+FKAAAD
Sbjct: 693 EHGNLWRQLWNDAPALPVSEQKSLLDPNREGEKILHYLETLRPHQLLEQMVCTSFKAAAD 752

Query: 121 TLSQTSYGGLKLMKTKMEQLYCTMASVLKFLQGNCLSAESEVIDDLRRLCVVFEHVEKLM 180
           TLSQT+YGGLKLMKTKMEQLY TMASVLKFLQGN LSAESEVIDDLRRLCVVFEHVEKLM
Sbjct: 753 TLSQTNYGGLKLMKTKMEQLYTTMASVLKFLQGNRLSAESEVIDDLRRLCVVFEHVEKLM 812

Query: 181 ALAASLHRKLSQAPRLSEVIFKDYYDFYMPRMGTGSSVSKFETEFNKKQLVRTHERGVIS 240
           ALAASLHRKLSQAPRLSEVIFKDY+DFY+PRMGTGSS SKF TEFNKKQLVR+HERGVIS
Sbjct: 813 ALAASLHRKLSQAPRLSEVIFKDYFDFYLPRMGTGSSGSKFRTEFNKKQLVRSHERGVIS 872

Query: 241 SMFPPPTSSQLWRKVLSMGNLFNGHEPILREIVFSLQDRVNGNHYADSTPAAR-EEIDTH 300
           SMF PPT+SQ WRKVLSMGNLFNGHEP+LREIVFSL+DRVNGNHYADSTP A+ EEIDTH
Sbjct: 873 SMFIPPTASQSWRKVLSMGNLFNGHEPMLREIVFSLRDRVNGNHYADSTPTAQEEEIDTH 932

Query: 301 RMYINGTSNDLRVALSVTSCD 321
           RMYINGT+NDLRVALSVTSCD
Sbjct: 933 RMYINGTANDLRVALSVTSCD 953

[Close]
BLAST of HG10021796 vs. NCBI nr
Match: XP_031745160.1 (rab3 GTPase-activating protein catalytic subunit isoform X2 [Cucumis sativus])

HSP 1 Score: 600.5 bits (1547), Expect = 8.4e-168
Identity = 295/321 (91.90%), Postives = 307/321 (95.64%), Query Frame = 0 

Query: 1   MSAFKAANPDGVFEDFIRWHSPGDWEEDSDPMDEDLPPGSATEALKNNWPPQGHLSKRMS 60
           MSAFKAANPDGVFEDFIRWHSPGDWEE+S P DEDLP  SATE  KNNWPP+GHLSKRMS
Sbjct: 609 MSAFKAANPDGVFEDFIRWHSPGDWEEESGPKDEDLPDSSATETSKNNWPPRGHLSKRMS 668

Query: 61  EHGNLWRQLWNDAPALPVSEQKSLLDPNREGEKILHYLETLRPHQLLEQMVCTAFKAAAD 120
           EHGNLWRQLWNDAPALPVSEQKSLLDPNREGEKILHYLETLRPHQLLEQMVCT+FKAAAD
Sbjct: 669 EHGNLWRQLWNDAPALPVSEQKSLLDPNREGEKILHYLETLRPHQLLEQMVCTSFKAAAD 728

Query: 121 TLSQTSYGGLKLMKTKMEQLYCTMASVLKFLQGNCLSAESEVIDDLRRLCVVFEHVEKLM 180
           TLSQT+YGGLKLMKTKMEQLY TMASVLKFLQGN LSAESEVIDDLRRLCVVFEHVEKLM
Sbjct: 729 TLSQTNYGGLKLMKTKMEQLYTTMASVLKFLQGNRLSAESEVIDDLRRLCVVFEHVEKLM 788

Query: 181 ALAASLHRKLSQAPRLSEVIFKDYYDFYMPRMGTGSSVSKFETEFNKKQLVRTHERGVIS 240
           ALAASLHRKLSQAPRLSEVIFKDY+DFY+PRMGTGSS SKF TEFNKKQLVR+HERGVIS
Sbjct: 789 ALAASLHRKLSQAPRLSEVIFKDYFDFYLPRMGTGSSGSKFRTEFNKKQLVRSHERGVIS 848

Query: 241 SMFPPPTSSQLWRKVLSMGNLFNGHEPILREIVFSLQDRVNGNHYADSTPAAR-EEIDTH 300
           SMF PPT+SQ WRKVLSMGNLFNGHEP+LREIVFSL+DRVNGNHYADSTP A+ EEIDTH
Sbjct: 849 SMFIPPTASQSWRKVLSMGNLFNGHEPMLREIVFSLRDRVNGNHYADSTPTAQEEEIDTH 908

Query: 301 RMYINGTSNDLRVALSVTSCD 321
           RMYINGT+NDLRVALSVTSCD
Sbjct: 909 RMYINGTANDLRVALSVTSCD 929

[Close]
BLAST of HG10021796 vs. ExPASy Swiss-Prot
Match: Q9VQ26 (Rab3 GTPase-activating protein catalytic subunit OS=Drosophila melanogaster OX=7227 GN=CG31935 PE=1 SV=2)

HSP 1 Score: 100.1 bits (248), Expect = 4.7e-20
Identity = 63/173 (36.42%), Postives = 88/173 (50.87%), Query Frame = 0 

Query: 1   MSAFKAANPDGVFEDFIRWHSPGDWEEDSDPMDEDLPPGSATEALKNNWPPQGHLSKRMS 60
           M AFKAANP G+ EDFIRW+SP DWEE +D + +                 +  LS RM+
Sbjct: 644 MEAFKAANPRGIMEDFIRWYSPKDWEEVTDELGQ----------------VKHQLSIRMT 703

Query: 61  EHGNLWRQLWNDAPALPVSEQKSLLDPNREGEKILHYLETLRPHQLLEQMVCTAFKAA-- 120
             GN W+++W  A A+PVS QK L D   E  K+LHYLET + H++    V     +A  
Sbjct: 704 TEGNTWQKVWEQAQAVPVSRQKRLFDDTNEALKVLHYLETRKMHEIYNLTVIPLLHSAIL 763

Query: 121 --ADTLSQTSYGGLKLMKTKMEQLYCTMASVLKFLQGNCLSAESEVIDDLRRL 170
             AD LS        L  +++E+L   +   L     + L +   ++DDL  L
Sbjct: 764 KLADILSNAELE--DLFSSQIEKLLSDLCR-LSRSHSDELPSIKPLLDDLAEL 797

[Close]
BLAST of HG10021796 vs. ExPASy Swiss-Prot
Match: Q15042 (Rab3 GTPase-activating protein catalytic subunit OS=Homo sapiens OX=9606 GN=RAB3GAP1 PE=1 SV=3)

HSP 1 Score: 86.7 bits (213), Expect = 5.4e-16
Identity = 62/190 (32.63%), Postives = 89/190 (46.84%), Query Frame = 0 

Query: 1   MSAFKAANPDGVFEDFIRWHSPGDWEEDSDPMDEDLPPGSATEALKNNWPPQGHLSKRMS 60
           M +FKAANP    EDF+RW+SP D+ E+ + +DE           K N   +G LS RM 
Sbjct: 683 MESFKAANPGCSLEDFVRWYSPRDYIEE-EVIDE-----------KGNVVLKGELSARMK 742

Query: 61  EHGNLWRQLWNDAPALPVSEQKSLLDPNREGEKILHYLETLRPHQLLEQMV-CTAFKAAA 120
              N+W + W  A  +P   Q+ L D  RE EK+LHYL   +P  L   ++ C    A  
Sbjct: 743 IPSNMWVEAWETAKPIPARRQRRLFDDTREAEKVLHYLAIQKPADLARHLLPCVIHAAVL 802

Query: 121 DTLSQTSYGGLKLMKTKMEQLYCTMASVLKFLQGNCLSAESEVIDDLRRLCVVFEHVEKL 180
               + S   +  +K  ++Q+    + VL F        E E+I  +        +VE L
Sbjct: 803 KVKEEESLENISSVKKIIKQIISHSSKVLHFPNPEDKKLE-EIIHQI-------TNVEAL 852

Query: 181 MALAASLHRK 190
           +A A SL  K
Sbjct: 863 IARARSLKAK 852

[Close]
BLAST of HG10021796 vs. ExPASy Swiss-Prot
Match: P69735 (Rab3 GTPase-activating protein catalytic subunit (Fragments) OS=Rattus norvegicus OX=10116 GN=Rab3gap1 PE=1 SV=2)

HSP 1 Score: 86.3 bits (212), Expect = 7.0e-16
Identity = 60/190 (31.58%), Postives = 87/190 (45.79%), Query Frame = 0 

Query: 1   MSAFKAANPDGVFEDFIRWHSPGDWEEDSDPMDEDLPPGSATEALKNNWPPQGHLSKRMS 60
           M +FKAANP    EDF+RW+SP D+ E+ +  DE           K N   +G LS RM 
Sbjct: 477 MESFKAANPGCCLEDFVRWYSPRDYIEE-EVTDE-----------KGNVVLKGELSARMK 536

Query: 61  EHGNLWRQLWNDAPALPVSEQKSLLDPNREGEKILHYLETLRPHQLLEQMV-CTAFKAAA 120
              N+W + W  A  +P   Q+ L D  RE EK+LHYL   +P  L   ++ C    A  
Sbjct: 537 IPSNMWVEAWETAKPVPARRQRRLFDDTREAEKVLHYLAMQKPADLARHLLPCVIHAAVL 596

Query: 121 DTLSQTSYGGLKLMKTKMEQLYCTMASVLKFLQGNCLSAESEVIDDLRRLCVVFEHVEKL 180
               + S   +  +K  ++Q+    + VL+F         S     L  + +    VE +
Sbjct: 597 KVKEEESLENIPSVKKIIKQIIAHSSKVLRF--------PSPEDKKLEEIILQITTVEAI 646

Query: 181 MALAASLHRK 190
           +A A SL  K
Sbjct: 657 IARARSLKAK 646

[Close]
BLAST of HG10021796 vs. ExPASy Swiss-Prot
Match: Q6NUV0 (Rab3 GTPase-activating protein catalytic subunit OS=Danio rerio OX=7955 GN=rab3gap1 PE=2 SV=2)

HSP 1 Score: 84.0 bits (206), Expect = 3.5e-15
Identity = 59/190 (31.05%), Postives = 88/190 (46.32%), Query Frame = 0 

Query: 1   MSAFKAANPDGVFEDFIRWHSPGDWEEDSDPMDEDLPPGSATEALKNNWPPQGHLSKRMS 60
           M +FKAANP     DF+RW+SP D+ E+             T+A       +G LS RM 
Sbjct: 671 MESFKAANPGCTLLDFVRWYSPRDYVEE-----------QVTDA-DGRVEVRGELSARMK 730

Query: 61  EHGNLWRQLWNDAPALPVSEQKSLLDPNREGEKILHYLETLRPHQLLEQMV-CTAFKAAA 120
             GN+W + W  A A P   QK L D  +E EK+LHYL   +P +L   ++ C    A  
Sbjct: 731 IPGNMWVEAWETARATPARRQKRLFDDTKEAEKVLHYLALQKPSELTRHLLPCVLHAALL 790

Query: 121 DTLSQTSYGGLKLMKTKMEQLYCTMASVLKFLQGNCLSAESEVIDDLRRLCVVFEHVEKL 180
               + S   L  +++ ++Q+  + + +L+         E +VI  L         VE +
Sbjct: 791 KIKEEESAEDLPSVRSSLQQISSSASKILRHPNPEFKKLE-DVISQLMA-------VEAV 840

Query: 181 MALAASLHRK 190
           +A A SL  K
Sbjct: 851 IARARSLKAK 840

[Close]
BLAST of HG10021796 vs. ExPASy Swiss-Prot
Match: Q80UJ7 (Rab3 GTPase-activating protein catalytic subunit OS=Mus musculus OX=10090 GN=Rab3gap1 PE=1 SV=4)

HSP 1 Score: 84.0 bits (206), Expect = 3.5e-15
Identity = 59/190 (31.05%), Postives = 86/190 (45.26%), Query Frame = 0 

Query: 1   MSAFKAANPDGVFEDFIRWHSPGDWEEDSDPMDEDLPPGSATEALKNNWPPQGHLSKRMS 60
           M +FKAANP    EDF+RW+SP D+ E+ +  DE           K N   +G LS RM 
Sbjct: 683 MESFKAANPGCFLEDFVRWYSPRDYIEE-EVTDE-----------KGNVVLKGELSARMK 742

Query: 61  EHGNLWRQLWNDAPALPVSEQKSLLDPNREGEKILHYLETLRPHQLLEQMV-CTAFKAAA 120
              N+W + W  A  +P   Q+ L D  RE EK+LHYL   +P  L   ++ C    A  
Sbjct: 743 IPSNMWVEAWETAKPVPARRQRRLFDDTREAEKVLHYLAMQKPADLARHLLPCVIHAAVL 802

Query: 121 DTLSQTSYGGLKLMKTKMEQLYCTMASVLKFLQGNCLSAESEVIDDLRRLCVVFEHVEKL 180
               + S   +  +K  ++Q+    + VL F         +     L  + +    VE +
Sbjct: 803 KVKEEESLENIPSVKKIIKQIIAHSSKVLHF--------PNPEDKKLEEIILQITTVEAI 852

Query: 181 MALAASLHRK 190
           +A A SL  K
Sbjct: 863 IARARSLKAK 852

[Close]
BLAST of HG10021796 vs. ExPASy TrEMBL
Match: A0A0A0LV89 (Rab3 GTPase-activating protein catalytic subunit OS=Cucumis sativus OX=3659 GN=Csa_1G533420 PE=3 SV=1)

HSP 1 Score: 600.5 bits (1547), Expect = 4.1e-168
Identity = 295/321 (91.90%), Postives = 307/321 (95.64%), Query Frame = 0 

Query: 1   MSAFKAANPDGVFEDFIRWHSPGDWEEDSDPMDEDLPPGSATEALKNNWPPQGHLSKRMS 60
           MSAFKAANPDGVFEDFIRWHSPGDWEE+S P DEDLP  SATE  KNNWPP+GHLSKRMS
Sbjct: 633 MSAFKAANPDGVFEDFIRWHSPGDWEEESGPKDEDLPDSSATETSKNNWPPRGHLSKRMS 692

Query: 61  EHGNLWRQLWNDAPALPVSEQKSLLDPNREGEKILHYLETLRPHQLLEQMVCTAFKAAAD 120
           EHGNLWRQLWNDAPALPVSEQKSLLDPNREGEKILHYLETLRPHQLLEQMVCT+FKAAAD
Sbjct: 693 EHGNLWRQLWNDAPALPVSEQKSLLDPNREGEKILHYLETLRPHQLLEQMVCTSFKAAAD 752

Query: 121 TLSQTSYGGLKLMKTKMEQLYCTMASVLKFLQGNCLSAESEVIDDLRRLCVVFEHVEKLM 180
           TLSQT+YGGLKLMKTKMEQLY TMASVLKFLQGN LSAESEVIDDLRRLCVVFEHVEKLM
Sbjct: 753 TLSQTNYGGLKLMKTKMEQLYTTMASVLKFLQGNRLSAESEVIDDLRRLCVVFEHVEKLM 812

Query: 181 ALAASLHRKLSQAPRLSEVIFKDYYDFYMPRMGTGSSVSKFETEFNKKQLVRTHERGVIS 240
           ALAASLHRKLSQAPRLSEVIFKDY+DFY+PRMGTGSS SKF TEFNKKQLVR+HERGVIS
Sbjct: 813 ALAASLHRKLSQAPRLSEVIFKDYFDFYLPRMGTGSSGSKFRTEFNKKQLVRSHERGVIS 872

Query: 241 SMFPPPTSSQLWRKVLSMGNLFNGHEPILREIVFSLQDRVNGNHYADSTPAAR-EEIDTH 300
           SMF PPT+SQ WRKVLSMGNLFNGHEP+LREIVFSL+DRVNGNHYADSTP A+ EEIDTH
Sbjct: 873 SMFIPPTASQSWRKVLSMGNLFNGHEPMLREIVFSLRDRVNGNHYADSTPTAQEEEIDTH 932

Query: 301 RMYINGTSNDLRVALSVTSCD 321
           RMYINGT+NDLRVALSVTSCD
Sbjct: 933 RMYINGTANDLRVALSVTSCD 953

[Close]
BLAST of HG10021796 vs. ExPASy TrEMBL
Match: A0A5A7UVM5 (Rab3 GTPase-activating protein catalytic subunit OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold194G00740 PE=3 SV=1)

HSP 1 Score: 599.0 bits (1543), Expect = 1.2e-167
Identity = 294/321 (91.59%), Postives = 306/321 (95.33%), Query Frame = 0 

Query: 1   MSAFKAANPDGVFEDFIRWHSPGDWEEDSDPMDEDLPPGSATEALKNNWPPQGHLSKRMS 60
           MSAFKAANPDGVFEDFIRWHSPGDWEE+S P DEDLP GSATE  KNNW P+GHLSKRMS
Sbjct: 634 MSAFKAANPDGVFEDFIRWHSPGDWEEESGPKDEDLPDGSATETSKNNWRPRGHLSKRMS 693

Query: 61  EHGNLWRQLWNDAPALPVSEQKSLLDPNREGEKILHYLETLRPHQLLEQMVCTAFKAAAD 120
           EHGNLWRQLWNDAPALPVSEQKSLLDPNREGEKILHYLETLRPHQLLEQMVCT+FKAAAD
Sbjct: 694 EHGNLWRQLWNDAPALPVSEQKSLLDPNREGEKILHYLETLRPHQLLEQMVCTSFKAAAD 753

Query: 121 TLSQTSYGGLKLMKTKMEQLYCTMASVLKFLQGNCLSAESEVIDDLRRLCVVFEHVEKLM 180
           TLSQT+YGGLKLMKTKMEQLY TMASVLKFLQGN LSAESEV DDLRRLCVVFEHVEKLM
Sbjct: 754 TLSQTNYGGLKLMKTKMEQLYSTMASVLKFLQGNRLSAESEVFDDLRRLCVVFEHVEKLM 813

Query: 181 ALAASLHRKLSQAPRLSEVIFKDYYDFYMPRMGTGSSVSKFETEFNKKQLVRTHERGVIS 240
           ALAASLHRK SQAPRLSEVIFKDY+DFY+PRMGTGSS SKF+TEFNKKQLVR+HERGVIS
Sbjct: 814 ALAASLHRKFSQAPRLSEVIFKDYFDFYLPRMGTGSSGSKFKTEFNKKQLVRSHERGVIS 873

Query: 241 SMFPPPTSSQLWRKVLSMGNLFNGHEPILREIVFSLQDRVNGNHYADSTPAAR-EEIDTH 300
           SMF PPT+SQ WRKVLSMGNLFNGHEP+LREIVFSL+DRVNGNHYADSTP AR EEIDTH
Sbjct: 874 SMFTPPTASQSWRKVLSMGNLFNGHEPMLREIVFSLRDRVNGNHYADSTPTAREEEIDTH 933

Query: 301 RMYINGTSNDLRVALSVTSCD 321
           RMYINGT+NDLRVALSVTSCD
Sbjct: 934 RMYINGTANDLRVALSVTSCD 954

[Close]
BLAST of HG10021796 vs. ExPASy TrEMBL
Match: A0A1S3C6J8 (Rab3 GTPase-activating protein catalytic subunit OS=Cucumis melo OX=3656 GN=LOC103497052 PE=3 SV=1)

HSP 1 Score: 599.0 bits (1543), Expect = 1.2e-167
Identity = 294/321 (91.59%), Postives = 306/321 (95.33%), Query Frame = 0 

Query: 1   MSAFKAANPDGVFEDFIRWHSPGDWEEDSDPMDEDLPPGSATEALKNNWPPQGHLSKRMS 60
           MSAFKAANPDGVFEDFIRWHSPGDWEE+S P DEDLP GSATE  KNNW P+GHLSKRMS
Sbjct: 634 MSAFKAANPDGVFEDFIRWHSPGDWEEESGPKDEDLPDGSATETSKNNWRPRGHLSKRMS 693

Query: 61  EHGNLWRQLWNDAPALPVSEQKSLLDPNREGEKILHYLETLRPHQLLEQMVCTAFKAAAD 120
           EHGNLWRQLWNDAPALPVSEQKSLLDPNREGEKILHYLETLRPHQLLEQMVCT+FKAAAD
Sbjct: 694 EHGNLWRQLWNDAPALPVSEQKSLLDPNREGEKILHYLETLRPHQLLEQMVCTSFKAAAD 753

Query: 121 TLSQTSYGGLKLMKTKMEQLYCTMASVLKFLQGNCLSAESEVIDDLRRLCVVFEHVEKLM 180
           TLSQT+YGGLKLMKTKMEQLY TMASVLKFLQGN LSAESEV DDLRRLCVVFEHVEKLM
Sbjct: 754 TLSQTNYGGLKLMKTKMEQLYSTMASVLKFLQGNRLSAESEVFDDLRRLCVVFEHVEKLM 813

Query: 181 ALAASLHRKLSQAPRLSEVIFKDYYDFYMPRMGTGSSVSKFETEFNKKQLVRTHERGVIS 240
           ALAASLHRK SQAPRLSEVIFKDY+DFY+PRMGTGSS SKF+TEFNKKQLVR+HERGVIS
Sbjct: 814 ALAASLHRKFSQAPRLSEVIFKDYFDFYLPRMGTGSSGSKFKTEFNKKQLVRSHERGVIS 873

Query: 241 SMFPPPTSSQLWRKVLSMGNLFNGHEPILREIVFSLQDRVNGNHYADSTPAAR-EEIDTH 300
           SMF PPT+SQ WRKVLSMGNLFNGHEP+LREIVFSL+DRVNGNHYADSTP AR EEIDTH
Sbjct: 874 SMFTPPTASQSWRKVLSMGNLFNGHEPMLREIVFSLRDRVNGNHYADSTPTAREEEIDTH 933

Query: 301 RMYINGTSNDLRVALSVTSCD 321
           RMYINGT+NDLRVALSVTSCD
Sbjct: 934 RMYINGTANDLRVALSVTSCD 954

[Close]
BLAST of HG10021796 vs. ExPASy TrEMBL
Match: A0A6J1GBV8 (Rab3 GTPase-activating protein catalytic subunit OS=Cucurbita moschata OX=3662 GN=LOC111452560 PE=3 SV=1)

HSP 1 Score: 581.6 bits (1498), Expect = 2.0e-162
Identity = 287/321 (89.41%), Postives = 301/321 (93.77%), Query Frame = 0 

Query: 1   MSAFKAANPDGVFEDFIRWHSPGDWEEDSDPMDEDLPPGSATEALKNNWPPQGHLSKRMS 60
           MSAFKAANPDGVFEDFIRWHSP DW EDSDP DE LP GSATE  K+NWPP+GHLSKRMS
Sbjct: 634 MSAFKAANPDGVFEDFIRWHSPRDW-EDSDPKDEGLPNGSATETSKDNWPPRGHLSKRMS 693

Query: 61  EHGNLWRQLWNDAPALPVSEQKSLLDPNREGEKILHYLETLRPHQLLEQMVCTAFKAAAD 120
           EHGNLWRQLWNDAPALPVSEQKSLLDPNREGEKILHYLETLRPHQLLEQMVCTAFKA AD
Sbjct: 694 EHGNLWRQLWNDAPALPVSEQKSLLDPNREGEKILHYLETLRPHQLLEQMVCTAFKAGAD 753

Query: 121 TLSQTSYGGLKLMKTKMEQLYCTMASVLKFLQGNCLSAESEVIDDLRRLCVVFEHVEKLM 180
           TLSQTSYGGLKLMKTKM+QLY TMASVLKFLQGN LSAESEVIDDLRRLCVVFEHVEKLM
Sbjct: 754 TLSQTSYGGLKLMKTKMDQLYSTMASVLKFLQGNRLSAESEVIDDLRRLCVVFEHVEKLM 813

Query: 181 ALAASLHRKLSQAPRLSEVIFKDYYDFYMPRMGTGSSVSKFETEFNKKQLVRTHERGVIS 240
           ALAASLHRKL QAPRLSE IFKDYY+FY+PRMGTG S +KFETEFNKKQLVR+HERG IS
Sbjct: 814 ALAASLHRKLLQAPRLSEAIFKDYYEFYLPRMGTGMSSNKFETEFNKKQLVRSHERGAIS 873

Query: 241 SMFPPPTSSQLWRKVLSMGNLFNGHEPILREIVFSLQDRVNGNHYADSTPAAR-EEIDTH 300
           S+F PPT+SQ WRKVLSMGNLFNGHEPILREI+FSL+DRV+GNHYADSTP AR E I+TH
Sbjct: 874 SLFTPPTASQSWRKVLSMGNLFNGHEPILREIIFSLRDRVSGNHYADSTPTARGEAIETH 933

Query: 301 RMYINGTSNDLRVALSVTSCD 321
           RMYI+GTSNDLRVALSVTSCD
Sbjct: 934 RMYISGTSNDLRVALSVTSCD 953

[Close]
BLAST of HG10021796 vs. ExPASy TrEMBL
Match: A0A6J1GBV2 (Rab3 GTPase-activating protein catalytic subunit OS=Cucurbita moschata OX=3662 GN=LOC111452560 PE=3 SV=1)

HSP 1 Score: 581.6 bits (1498), Expect = 2.0e-162
Identity = 287/321 (89.41%), Postives = 301/321 (93.77%), Query Frame = 0 

Query: 1   MSAFKAANPDGVFEDFIRWHSPGDWEEDSDPMDEDLPPGSATEALKNNWPPQGHLSKRMS 60
           MSAFKAANPDGVFEDFIRWHSP DW EDSDP DE LP GSATE  K+NWPP+GHLSKRMS
Sbjct: 581 MSAFKAANPDGVFEDFIRWHSPRDW-EDSDPKDEGLPNGSATETSKDNWPPRGHLSKRMS 640

Query: 61  EHGNLWRQLWNDAPALPVSEQKSLLDPNREGEKILHYLETLRPHQLLEQMVCTAFKAAAD 120
           EHGNLWRQLWNDAPALPVSEQKSLLDPNREGEKILHYLETLRPHQLLEQMVCTAFKA AD
Sbjct: 641 EHGNLWRQLWNDAPALPVSEQKSLLDPNREGEKILHYLETLRPHQLLEQMVCTAFKAGAD 700

Query: 121 TLSQTSYGGLKLMKTKMEQLYCTMASVLKFLQGNCLSAESEVIDDLRRLCVVFEHVEKLM 180
           TLSQTSYGGLKLMKTKM+QLY TMASVLKFLQGN LSAESEVIDDLRRLCVVFEHVEKLM
Sbjct: 701 TLSQTSYGGLKLMKTKMDQLYSTMASVLKFLQGNRLSAESEVIDDLRRLCVVFEHVEKLM 760

Query: 181 ALAASLHRKLSQAPRLSEVIFKDYYDFYMPRMGTGSSVSKFETEFNKKQLVRTHERGVIS 240
           ALAASLHRKL QAPRLSE IFKDYY+FY+PRMGTG S +KFETEFNKKQLVR+HERG IS
Sbjct: 761 ALAASLHRKLLQAPRLSEAIFKDYYEFYLPRMGTGMSSNKFETEFNKKQLVRSHERGAIS 820

Query: 241 SMFPPPTSSQLWRKVLSMGNLFNGHEPILREIVFSLQDRVNGNHYADSTPAAR-EEIDTH 300
           S+F PPT+SQ WRKVLSMGNLFNGHEPILREI+FSL+DRV+GNHYADSTP AR E I+TH
Sbjct: 821 SLFTPPTASQSWRKVLSMGNLFNGHEPILREIIFSLRDRVSGNHYADSTPTARGEAIETH 880

Query: 301 RMYINGTSNDLRVALSVTSCD 321
           RMYI+GTSNDLRVALSVTSCD
Sbjct: 881 RMYISGTSNDLRVALSVTSCD 900

[Close]
BLAST of HG10021796 vs. TAIR 10
Match: AT5G58510.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G55060.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 396.4 bits (1017), Expect = 2.2e-110
Identity = 200/330 (60.61%), Postives = 247/330 (74.85%), Query Frame = 0 

Query: 1   MSAFKAANPDGVFEDFIRWHSPGDWEEDSDPMDEDLPPGSATEALKNNWPPQGHLSKRMS 60
           MSAFKAANPD VFEDFIRWHSPGDW E  +P   +   G +TE  K+ WPP+G LS+RMS
Sbjct: 635 MSAFKAANPDAVFEDFIRWHSPGDW-ESFEPKTTEPSAGPSTEGSKDEWPPRGRLSQRMS 694

Query: 61  EHGNLWRQLWNDAPALPVSEQKSLLDPNREGEKILHYLETLRPHQLLEQMVCTAFKAAAD 120
           + GNLWR+ WNDAPALP  +QK LLDPNREGEKI+HYLET+RPHQLLEQMVCTAF+ +AD
Sbjct: 695 DQGNLWRKSWNDAPALPADDQKPLLDPNREGEKIVHYLETVRPHQLLEQMVCTAFRGSAD 754

Query: 121 TLSQTSYGGLKLMKTKMEQLYCTMASVLKFLQGNCLSAESEVIDDLRRLCVVFEHVEKLM 180
           TL+QT+ G ++ M +K+EQLY  M   L  LQ N L  +++ + DL+RLC+VFE+VEKL+
Sbjct: 755 TLNQTNVGNMRQMTSKLEQLYLIMKFTLGALQRNNLPDKAKTVKDLKRLCMVFENVEKLV 814

Query: 181 ALAASLHRKLSQAPRLSEVIFKDYYDFYMPRMGTGSS--VSKFETEFN-KKQLVRTHERG 240
           A+AAS+HRK   A RL++VIF D+Y  Y P MG  ++   +K  TE    +Q V   ER 
Sbjct: 815 AVAASIHRKFLDASRLAQVIFSDFYGVYAPTMGMSANDEENKSRTEMEVSRQEVSLRERQ 874

Query: 241 VISSMFPPPTSSQLWRKVLSMGNLFNGHEPILREIVFSLQDRV-NGNHYADSTPAAR--- 300
           V+S++F PP+++Q WRKVLSMGNL NGHEPILREI+FS  D V NG HYA +   A    
Sbjct: 875 VVSNLFSPPSANQSWRKVLSMGNLLNGHEPILREIIFSTGDDVNNGIHYAAAADVAATSD 934

Query: 301 ---EEIDTHRMYINGTSNDLRVALSVTSCD 321
              EEI+THRMY++GTSNDLRV LSVTSCD
Sbjct: 935 RKGEEIETHRMYVSGTSNDLRVGLSVTSCD 963

[Close]
BLAST of HG10021796 vs. TAIR 10
Match: AT5G55060.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G58510.1); Has 223 Blast hits to 218 proteins in 80 species: Archae - 0; Bacteria - 2; Metazoa - 117; Fungi - 6; Plants - 65; Viruses - 0; Other Eukaryotes - 33 (source: NCBI BLink). )

HSP 1 Score: 95.5 bits (236), Expect = 8.2e-20
Identity = 65/192 (33.85%), Postives = 91/192 (47.40%), Query Frame = 0 

Query: 1   MSAFKAANPDGVFEDFIRWHSPGDWEEDSDPMDEDLPPGSATEALKNNWPPQGHLSKRMS 60
           M AFKAANP  + EDF+RWHSP DW E+ +   +D            + P +G LS RM 
Sbjct: 419 MQAFKAANPGCILEDFVRWHSPPDWTENGNMSGDD------------SSPVRGQLSTRMQ 478

Query: 61  EHGNLWRQLWNDAPALPVSEQKSLLDPNREGEKILHYLETLRPHQLLEQMVCTAFKAAAD 120
           + GNLWR+LW  A  LP  +Q  L D +   E IL+YLE +   +L EQ+  +       
Sbjct: 479 KEGNLWRELWETAKPLPAVKQAPLFDEDLAVEGILNYLEDIPAAELFEQLFTSLVSLGFV 538

Query: 121 TLSQTSYGGLKLMKTKMEQLYCTMASVLKFLQGNCLSAESEVIDDLRRLCVVFEHVEKLM 180
            +         L K   E        V+   QG    A ++ +DD   LC V+E VE ++
Sbjct: 539 MVEPVLATNDDLSKLFFE----CKDYVVAICQG---GAWTDKLDD---LCQVYETVETML 588

Query: 181 ALAASLHRKLSQ 193
                + R + Q
Sbjct: 599 LRPEEVLRSMKQ 588

[Close]
BLAST of HG10021796 vs. TAIR 10
Match: AT5G55060.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G58510.1). )

HSP 1 Score: 95.5 bits (236), Expect = 8.2e-20
Identity = 65/192 (33.85%), Postives = 91/192 (47.40%), Query Frame = 0 

Query: 1   MSAFKAANPDGVFEDFIRWHSPGDWEEDSDPMDEDLPPGSATEALKNNWPPQGHLSKRMS 60
           M AFKAANP  + EDF+RWHSP DW E+ +   +D            + P +G LS RM 
Sbjct: 326 MQAFKAANPGCILEDFVRWHSPPDWTENGNMSGDD------------SSPVRGQLSTRMQ 385

Query: 61  EHGNLWRQLWNDAPALPVSEQKSLLDPNREGEKILHYLETLRPHQLLEQMVCTAFKAAAD 120
           + GNLWR+LW  A  LP  +Q  L D +   E IL+YLE +   +L EQ+  +       
Sbjct: 386 KEGNLWRELWETAKPLPAVKQAPLFDEDLAVEGILNYLEDIPAAELFEQLFTSLVSLGFV 445

Query: 121 TLSQTSYGGLKLMKTKMEQLYCTMASVLKFLQGNCLSAESEVIDDLRRLCVVFEHVEKLM 180
            +         L K   E        V+   QG    A ++ +DD   LC V+E VE ++
Sbjct: 446 MVEPVLATNDDLSKLFFE----CKDYVVAICQG---GAWTDKLDD---LCQVYETVETML 495

Query: 181 ALAASLHRKLSQ 193
                + R + Q
Sbjct: 506 LRPEEVLRSMKQ 495

The following BLAST results are available for this feature:
BLAST of HG10021796 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038894474.11.8e-17093.77rab3 GTPase-activating protein catalytic subunit isoform X3 [Benincasa hispida][more]
XP_038894473.11.8e-17093.77rab3 GTPase-activating protein catalytic subunit isoform X2 [Benincasa hispida][more]
XP_038894472.11.8e-17093.77rab3 GTPase-activating protein catalytic subunit isoform X1 [Benincasa hispida][more]
XP_011658733.18.4e-16891.90rab3 GTPase-activating protein catalytic subunit isoform X1 [Cucumis sativus] >K... [more]
XP_031745160.18.4e-16891.90rab3 GTPase-activating protein catalytic subunit isoform X2 [Cucumis sativus][more]
BLAST of HG10021796 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9VQ264.7e-2036.42Rab3 GTPase-activating protein catalytic subunit OS=Drosophila melanogaster OX=7... [more]
Q150425.4e-1632.63Rab3 GTPase-activating protein catalytic subunit OS=Homo sapiens OX=9606 GN=RAB3... [more]
P697357.0e-1631.58Rab3 GTPase-activating protein catalytic subunit (Fragments) OS=Rattus norvegicu... [more]
Q6NUV03.5e-1531.05Rab3 GTPase-activating protein catalytic subunit OS=Danio rerio OX=7955 GN=rab3g... [more]
Q80UJ73.5e-1531.05Rab3 GTPase-activating protein catalytic subunit OS=Mus musculus OX=10090 GN=Rab... [more]
BLAST of HG10021796 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LV894.1e-16891.90Rab3 GTPase-activating protein catalytic subunit OS=Cucumis sativus OX=3659 GN=C... [more]
A0A5A7UVM51.2e-16791.59Rab3 GTPase-activating protein catalytic subunit OS=Cucumis melo var. makuwa OX=... [more]
A0A1S3C6J81.2e-16791.59Rab3 GTPase-activating protein catalytic subunit OS=Cucumis melo OX=3656 GN=LOC1... [more]
A0A6J1GBV82.0e-16289.41Rab3 GTPase-activating protein catalytic subunit OS=Cucurbita moschata OX=3662 G... [more]
A0A6J1GBV22.0e-16289.41Rab3 GTPase-activating protein catalytic subunit OS=Cucurbita moschata OX=3662 G... [more]
BLAST of HG10021796 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G58510.12.2e-11060.61unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT5G55060.18.2e-2033.85unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT5G55060.28.2e-2033.85unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR026147Rab3 GTPase-activating protein catalytic subunitPFAMPF13890Rab3-GTPase_catcoord: 1..99
e-value: 1.2E-33
score: 116.1
IPR026147Rab3 GTPase-activating protein catalytic subunitPANTHERPTHR21422RAB3 GTPASE-ACTIVATING PROTEIN CATALYTIC SUBUNITcoord: 1..318
NoneNo IPR availablePANTHERPTHR21422:SF13BNAANNG16370D PROTEINcoord: 1..318

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
HG10021796.1HG10021796.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0043547 positive regulation of GTPase activity
cellular_component GO:0005737 cytoplasm
molecular_function GO:0005096 GTPase activator activity