HG10021780 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10021780
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	CCT domain-containing protein
Location	Chr05: 16559925 .. 16560943 (+)
RNA-Seq Expression	HG10021780
Synteny	HG10021780

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGTTTTAGTTGGTTAGTGAAGAGCCCAAAGAAAGAAGATGAACAACAAGTTCCTAATTCCATTTGGGACGATGACTTTAAAGCTTTTTTTGAGCTCACCGATGAAGAAAACCCACCGCCGCCGATGCAGCCGGATTATCGTTTCCACGACCACGGCGTTATGGAAAGCAAGAAGAAGGCAGCTTCTTTGAACTTAAATCTCAACTGTGATGAGGTTTTGGAAGCATGGTCCGGCCGTGGATCTCTTTGGGCCGCCGCGTCTTCTCTTTCCAACGACCCAACTCACGACCCCTATGTAAGTTATTCGGTTAACGTCCGTTTCATTGCTGTTTAGTTTTTATAAACCGTGCTTGTTTTCTTACTATTATGATTGTTTCATCTATGTCCCATTTGTATTATAACTAATATATAACCATGTGTACTAAAAAAATATATAATTAAAAACTAAATGAATAATAAAAGAAAATAAAGAAAGTTTAACTTAGCTCAACTGATATAAAACTTGTACTATCAACCTAAAGTTGTTAAAAAAAGTATGTGTTATAATCTTTTTATATAGAGTGATATAAACTGGGTGAAGCAAGTAATGAAATAATCTAAAATGAGCAATATTTAGGTGCCGCCCTAAGTCACTTAAGTCTATACTCCCCCTTTTCTTTACACATAAAAAAATAATTTTTTGAAAAAAAAAAACGAATTAAACGACCATGTGACAACTTTTAATGGAGTGCAAACAATAGATGAACTATGCCTAAGTTTTTTCATATAAAATTTGAACAAAATTATATTAAGTAATAGTGTATATTCTAAATTATTTTAAAATTTGTGGAATAATGTTGAATAATATAGATGGGAGAGGTTCCAAGAATGGAGGAAGAAAGAACAAGAAGAGTGATGAGGTACAAGGAAAAGCGTAACACCAGATTATTCTCCAAGAAGATAAGATACCAAGTTCGTAAGCTCAATGCAGAGAAAAGGCCTAGAATAAAGGTGAATATAATCAACCCCTTTCCTTAA

mRNA sequence

ATGAGTTTTAGTTGGTTAGTGAAGAGCCCAAAGAAAGAAGATGAACAACAAGTTCCTAATTCCATTTGGGACGATGACTTTAAAGCTTTTTTTGAGCTCACCGATGAAGAAAACCCACCGCCGCCGATGCAGCCGGATTATCGTTTCCACGACCACGGCGTTATGGAAAGCAAGAAGAAGGCAGCTTCTTTGAACTTAAATCTCAACTGTGATGAGGTTTTGGAAGCATGGTCCGGCCGTGGATCTCTTTGGGCCGCCGCGTCTTCTCTTTCCAACGACCCAACTCACGACCCCTATATGGGAGAGGTTCCAAGAATGGAGGAAGAAAGAACAAGAAGAGTGATGAGGTACAAGGAAAAGCGTAACACCAGATTATTCTCCAAGAAGATAAGATACCAAGTTCGTAAGCTCAATGCAGAGAAAAGGCCTAGAATAAAGGTGAATATAATCAACCCCTTTCCTTAA

Coding sequence (CDS)

ATGAGTTTTAGTTGGTTAGTGAAGAGCCCAAAGAAAGAAGATGAACAACAAGTTCCTAATTCCATTTGGGACGATGACTTTAAAGCTTTTTTTGAGCTCACCGATGAAGAAAACCCACCGCCGCCGATGCAGCCGGATTATCGTTTCCACGACCACGGCGTTATGGAAAGCAAGAAGAAGGCAGCTTCTTTGAACTTAAATCTCAACTGTGATGAGGTTTTGGAAGCATGGTCCGGCCGTGGATCTCTTTGGGCCGCCGCGTCTTCTCTTTCCAACGACCCAACTCACGACCCCTATATGGGAGAGGTTCCAAGAATGGAGGAAGAAAGAACAAGAAGAGTGATGAGGTACAAGGAAAAGCGTAACACCAGATTATTCTCCAAGAAGATAAGATACCAAGTTCGTAAGCTCAATGCAGAGAAAAGGCCTAGAATAAAGGTGAATATAATCAACCCCTTTCCTTAA

Protein sequence

MSFSWLVKSPKKEDEQQVPNSIWDDDFKAFFELTDEENPPPPMQPDYRFHDHGVMESKKKAASLNLNLNCDEVLEAWSGRGSLWAAASSLSNDPTHDPYMGEVPRMEEERTRRVMRYKEKRNTRLFSKKIRYQVRKLNAEKRPRIKVNIINPFP

Homology

[Close]

BLAST of HG10021780 vs. NCBI nr
Match: XP_038893945.1 (zinc finger protein CONSTANS-LIKE 7 isoform X2 [Benincasa hispida])

HSP 1 Score: 242.3 bits (617), Expect = 2.8e-60
Identity = 126/149 (84.56%), Postives = 133/149 (89.26%), Query Frame = 0


Query: 1   MSFSWLVKSPKKEDEQQVPNSIWDDDFKAFFELTDEENPPPP--MQPDYRFHDHGVMESK 60
           M FSWLVKSPKKEDEQQVPNSIW+DDFKAFFELTDEENPP P   QPDY FHD   ME+K
Sbjct: 6   MGFSWLVKSPKKEDEQQVPNSIWEDDFKAFFELTDEENPPRPPLQQPDYHFHDGAFMENK 65

Query: 61  KKAASLNLNLNCDEVLEAWSGRGSLW-AAASSLSNDPTHDPYMGEVPRMEEERTRRVMRY 120
            K  SLNLNLN +EVLEAWS RGSLW AAASSL++D THDPYMGEVPRMEEERTRRV+RY
Sbjct: 66  NK-ISLNLNLNYEEVLEAWSDRGSLWAAAASSLTDDATHDPYMGEVPRMEEERTRRVLRY 125

Query: 121 KEKRNTRLFSKKIRYQVRKLNAEKRPRIK 147
           KEKR+TRLFSKKIRYQVRKLNAEKRPRIK
Sbjct: 126 KEKRHTRLFSKKIRYQVRKLNAEKRPRIK 153

[Close]

BLAST of HG10021780 vs. NCBI nr
Match: XP_038893946.1 (zinc finger protein CONSTANS-LIKE 7 isoform X3 [Benincasa hispida])

HSP 1 Score: 242.3 bits (617), Expect = 2.8e-60
Identity = 126/149 (84.56%), Postives = 133/149 (89.26%), Query Frame = 0


Query: 1   MSFSWLVKSPKKEDEQQVPNSIWDDDFKAFFELTDEENPPPP--MQPDYRFHDHGVMESK 60
           M FSWLVKSPKKEDEQQVPNSIW+DDFKAFFELTDEENPP P   QPDY FHD   ME+K
Sbjct: 6   MGFSWLVKSPKKEDEQQVPNSIWEDDFKAFFELTDEENPPRPPLQQPDYHFHDGAFMENK 65

Query: 61  KKAASLNLNLNCDEVLEAWSGRGSLW-AAASSLSNDPTHDPYMGEVPRMEEERTRRVMRY 120
            K  SLNLNLN +EVLEAWS RGSLW AAASSL++D THDPYMGEVPRMEEERTRRV+RY
Sbjct: 66  NK-ISLNLNLNYEEVLEAWSDRGSLWAAAASSLTDDATHDPYMGEVPRMEEERTRRVLRY 125

Query: 121 KEKRNTRLFSKKIRYQVRKLNAEKRPRIK 147
           KEKR+TRLFSKKIRYQVRKLNAEKRPRIK
Sbjct: 126 KEKRHTRLFSKKIRYQVRKLNAEKRPRIK 153

[Close]

BLAST of HG10021780 vs. NCBI nr
Match: XP_038893944.1 (zinc finger protein CONSTANS-LIKE 16 isoform X1 [Benincasa hispida])

HSP 1 Score: 242.3 bits (617), Expect = 2.8e-60
Identity = 126/149 (84.56%), Postives = 133/149 (89.26%), Query Frame = 0


Query: 1   MSFSWLVKSPKKEDEQQVPNSIWDDDFKAFFELTDEENPPPP--MQPDYRFHDHGVMESK 60
           M FSWLVKSPKKEDEQQVPNSIW+DDFKAFFELTDEENPP P   QPDY FHD   ME+K
Sbjct: 6   MGFSWLVKSPKKEDEQQVPNSIWEDDFKAFFELTDEENPPRPPLQQPDYHFHDGAFMENK 65

Query: 61  KKAASLNLNLNCDEVLEAWSGRGSLW-AAASSLSNDPTHDPYMGEVPRMEEERTRRVMRY 120
            K  SLNLNLN +EVLEAWS RGSLW AAASSL++D THDPYMGEVPRMEEERTRRV+RY
Sbjct: 66  NK-ISLNLNLNYEEVLEAWSDRGSLWAAAASSLTDDATHDPYMGEVPRMEEERTRRVLRY 125

Query: 121 KEKRNTRLFSKKIRYQVRKLNAEKRPRIK 147
           KEKR+TRLFSKKIRYQVRKLNAEKRPRIK
Sbjct: 126 KEKRHTRLFSKKIRYQVRKLNAEKRPRIK 153

[Close]

BLAST of HG10021780 vs. NCBI nr
Match: KGN65847.1 (hypothetical protein Csa_023240 [Cucumis sativus])

HSP 1 Score: 196.4 bits (498), Expect = 1.8e-46
Identity = 110/156 (70.51%), Postives = 124/156 (79.49%), Query Frame = 0


Query: 3   FSWLVKSPKKE--DEQQV---PNSIWDDDFKAFFELTDEENPPPPM-QPDY---RFHDHG 62
           FSWLVKSPKKE   EQQV   P+SIW+DDF+AFF+LT EE PPPP+  PDY   + H + 
Sbjct: 8   FSWLVKSPKKELLHEQQVVPTPSSIWEDDFRAFFDLTHEETPPPPLHHPDYYHFQNHVND 67

Query: 63  VMESKKKAASLNLNLNCDEVLEAWSGRGSLWAAASSL-SNDPTHDPYMGEVP--RMEEER 122
           VME+  K ++LNLNLN +EVLEAWS RGSLWAAASS  SND TH PYMGEVP  RMEEER
Sbjct: 68  VMENNNKVSNLNLNLNYEEVLEAWSDRGSLWAAASSSHSNDSTHTPYMGEVPIIRMEEER 127

Query: 123 TRRVMRYKEKRNTRLFSKKIRYQVRKLNAEKRPRIK 147
            RRV RYKEKR  R+F KKIRYQVRKLNA++RPRIK
Sbjct: 128 RRRVKRYKEKRQARIFCKKIRYQVRKLNADRRPRIK 163

[Close]

BLAST of HG10021780 vs. NCBI nr
Match: XP_023520167.1 (zinc finger protein CONSTANS-LIKE 6 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 175.3 bits (443), Expect = 4.2e-40
Identity = 108/199 (54.27%), Postives = 123/199 (61.81%), Query Frame = 0


Query: 1   MSFSWLVKSPKK---EDEQQVPNSIWDDDFKAFFELTDEENPPPPMQPDY---------- 60
           M +S L+KSPKK   E+EQ+VPNSIW DDFKAFFEL++EE  P   Q ++          
Sbjct: 1   MGYSSLLKSPKKEGAEEEQEVPNSIW-DDFKAFFELSNEEKLPLQQQENFSIVNGGPLNW 60

Query: 61  ----------------------------------------RFHDHGVMESKKKAASLNLN 120
                                                    F   GVMESKKK ASLNLN
Sbjct: 61  DLMDHHSNHQFSLSETKTNHSGHGDGVEAEVFSRVVPKACSFDGDGVMESKKK-ASLNLN 120

Query: 121 LNCDEVLEAWSGRGSLWAAASSLSNDPTHDPYMGEVPRMEEERTRRVMRYKEKRNTRLFS 147
           LN +EV EAWSGRGSLWAA  S  ++PTH+ YMGEVPRMEEERTRRV+RY+EKR TRLFS
Sbjct: 121 LNYEEVSEAWSGRGSLWAAGGSSPSNPTHNVYMGEVPRMEEERTRRVLRYREKRLTRLFS 180

[Close]

BLAST of HG10021780 vs. ExPASy Swiss-Prot
Match: Q8LG76 (Zinc finger protein CONSTANS-LIKE 6 OS=Arabidopsis thaliana OX=3702 GN=COL6 PE=2 SV=2)

HSP 1 Score: 69.7 bits (169), Expect = 3.3e-11
Identity = 50/118 (42.37%), Postives = 62/118 (52.54%), Query Frame = 0


Query: 53  GVMESKKKAASLNLNLNCDEVLEAWSGRGSLWAA--ASSLSND----PTHDPYMGEVPRM 112
           G ++ +KK  +L L L+ + V+  W G+G  W A   S +  D    PTH   MGE    
Sbjct: 278 GGIKEEKKEKALMLRLDYESVISTWGGQGIPWTARVPSEIDLDMVCFPTHT--MGESGAE 337

Query: 113 EEE------------------RTRRVMRYKEKRNTRLFSKKIRYQVRKLNAEKRPRIK 147
                                R  RV RY+EKR TRLFSKKIRY+VRKLNAEKRPR+K
Sbjct: 338 AHHHNHFRGLGLHLGDAGDGGREARVSRYREKRRTRLFSKKIRYEVRKLNAEKRPRMK 393

[Close]

BLAST of HG10021780 vs. ExPASy Swiss-Prot
Match: Q9C9A9 (Zinc finger protein CONSTANS-LIKE 7 OS=Arabidopsis thaliana OX=3702 GN=COL7 PE=2 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 5.6e-11
Identity = 56/156 (35.90%), Postives = 72/156 (46.15%), Query Frame = 0


Query: 13  EDEQQVPNSIWDDDFKAFFELTDEENPPPPMQPDYRFHDHGVMESKKKAASLNLNLNCDE 72
           ++E +V   I   D K   +  +EE          +  D      K +  SL L L+   
Sbjct: 226 KEENKVGFEINCKDLKRVKDEDEEEEEAKCENGGSKDSDREASNDKDRKTSLFLRLDYGA 285

Query: 73  VLEAWSGRGSLWAAA---SSLSNDPTHDPYM-----------GEVPRM--------EEER 132
           V+ AW   GS W        +    T  P++           G V R         + ER
Sbjct: 286 VISAWDNHGSPWKTGIKPECMLGGNTCLPHVVGGYEKLMSSDGSVTRQQGRDGGGSDGER 345

Query: 133 TRRVMRYKEKRNTRLFSKKIRYQVRKLNAEKRPRIK 147
             RV+RYKEKR TRLFSKKIRY+VRKLNAE+RPRIK
Sbjct: 346 EARVLRYKEKRRTRLFSKKIRYEVRKLNAEQRPRIK 381

[Close]

BLAST of HG10021780 vs. ExPASy Swiss-Prot
Match: Q8RWD0 (Zinc finger protein CONSTANS-LIKE 16 OS=Arabidopsis thaliana OX=3702 GN=COL16 PE=1 SV=2)

HSP 1 Score: 66.6 bits (161), Expect = 2.8e-10
Identity = 49/105 (46.67%), Postives = 59/105 (56.19%), Query Frame = 0


Query: 64  LNLNLNCDEVLEAWSGRG---------------SLWAAASSLSN--DPTHD-PYMGE-VP 123
           L L LN D V+  W G+G               S W A S + N  + TH   Y+G  +P
Sbjct: 293 LMLRLNYDSVISTWGGQGPPWSSGEPPERDMDISGWPAFSMVENGGESTHQKQYVGGCLP 352

Query: 124 RM---EEERTRRVMRYKEKRNTRLFSKKIRYQVRKLNAEKRPRIK 147
                +  R  RV RY+EKR TRLFSKKIRY+VRKLNAEKRPR+K
Sbjct: 353 SSGFGDGGREARVSRYREKRRTRLFSKKIRYEVRKLNAEKRPRMK 397

[Close]

BLAST of HG10021780 vs. ExPASy Swiss-Prot
Match: Q9LU68 (Protein CHLOROPLAST IMPORT APPARATUS 2 OS=Arabidopsis thaliana OX=3702 GN=CIA2 PE=1 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 1.8e-09
Identity = 42/93 (45.16%), Postives = 55/93 (59.14%), Query Frame = 0


Query: 56  ESKKKAASLNLNLNCDEVLEAWSGRGSLWAAASSLSNDPTHDPYMGEVPRMEEE--RTRR 115
           E+  K     L L+ D VLEAWS + S +      S     +  + ++    +   R   
Sbjct: 327 ETSLKRTGPLLKLDYDGVLEAWSDKTSPFPDEIQGSEAVDVNARLAQIDLFGDSGMREAS 386

Query: 116 VMRYKEKRNTRLFSKKIRYQVRKLNAEKRPRIK 147
           V+RYKEKR TRLFSKKIRYQVRKLNA++RPR+K
Sbjct: 387 VLRYKEKRRTRLFSKKIRYQVRKLNADQRPRMK 419

[Close]

BLAST of HG10021780 vs. ExPASy Swiss-Prot
Match: Q9M9B3 (Zinc finger protein CONSTANS-LIKE 8 OS=Arabidopsis thaliana OX=3702 GN=COL8 PE=1 SV=2)

HSP 1 Score: 59.7 bits (143), Expect = 3.4e-08
Identity = 36/79 (45.57%), Postives = 50/79 (63.29%), Query Frame = 0


Query: 68  LNCDEVLEAWSGRGSLWAAASSLSNDPTHDPYMGEVPRMEEERTRRVMRYKEKRNTRLFS 127
           LN + V+ AW  + S     ++ S+     P + E  R+  ER  RV RY++KR  RLF 
Sbjct: 230 LNYENVIAAWDKQESPRDVKNNTSSFQLVPPGI-EEKRVRSEREARVWRYRDKRKNRLFE 289

Query: 128 KKIRYQVRKLNAEKRPRIK 147
           KKIRY+VRK+NA+KRPR+K
Sbjct: 290 KKIRYEVRKVNADKRPRMK 307

[Close]

BLAST of HG10021780 vs. ExPASy TrEMBL
Match: A0A0A0LYC0 (CCT domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G533540 PE=4 SV=1)

HSP 1 Score: 196.4 bits (498), Expect = 8.5e-47
Identity = 110/156 (70.51%), Postives = 124/156 (79.49%), Query Frame = 0


Query: 3   FSWLVKSPKKE--DEQQV---PNSIWDDDFKAFFELTDEENPPPPM-QPDY---RFHDHG 62
           FSWLVKSPKKE   EQQV   P+SIW+DDF+AFF+LT EE PPPP+  PDY   + H + 
Sbjct: 8   FSWLVKSPKKELLHEQQVVPTPSSIWEDDFRAFFDLTHEETPPPPLHHPDYYHFQNHVND 67

Query: 63  VMESKKKAASLNLNLNCDEVLEAWSGRGSLWAAASSL-SNDPTHDPYMGEVP--RMEEER 122
           VME+  K ++LNLNLN +EVLEAWS RGSLWAAASS  SND TH PYMGEVP  RMEEER
Sbjct: 68  VMENNNKVSNLNLNLNYEEVLEAWSDRGSLWAAASSSHSNDSTHTPYMGEVPIIRMEEER 127

Query: 123 TRRVMRYKEKRNTRLFSKKIRYQVRKLNAEKRPRIK 147
            RRV RYKEKR  R+F KKIRYQVRKLNA++RPRIK
Sbjct: 128 RRRVKRYKEKRQARIFCKKIRYQVRKLNADRRPRIK 163

[Close]

BLAST of HG10021780 vs. ExPASy TrEMBL
Match: A0A6J1HJ00 (zinc finger protein CONSTANS-LIKE 6 OS=Cucurbita moschata OX=3662 GN=LOC111464884 PE=4 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 2.9e-39
Identity = 106/201 (52.74%), Postives = 122/201 (60.70%), Query Frame = 0


Query: 1   MSFSWLVKSPKK---EDEQQVPNSIWDDDFKAFFELTDEENPPPPMQPDY---------- 60
           M +S L+KSPKK   E+EQ+VPNSIW DDFKAFFEL++EE  P   Q ++          
Sbjct: 1   MGYSSLLKSPKKEGEEEEQEVPNSIW-DDFKAFFELSNEEKLPLQQQENFSIVNGGPLNW 60

Query: 61  ------------------------------------------RFHDHGVMESKKKAASLN 120
                                                      F   GVM+SKKK ASLN
Sbjct: 61  DLMDHHSNHQFSLSETKANHGGHGYGIEAEAEAFSRVVPKACSFDGDGVMKSKKK-ASLN 120

Query: 121 LNLNCDEVLEAWSGRGSLWAAASSLSNDPTHDPYMGEVPRMEEERTRRVMRYKEKRNTRL 147
           LNLN +EV EAWSGRGSLWA   S  ++PTH+ YMGEVPRMEEERTRRV+RY+EKR TRL
Sbjct: 121 LNLNYEEVSEAWSGRGSLWAGGGSSPSNPTHNVYMGEVPRMEEERTRRVLRYREKRLTRL 180

[Close]

BLAST of HG10021780 vs. ExPASy TrEMBL
Match: A0A6J1I4F9 (zinc finger protein CONSTANS-LIKE 6 OS=Cucurbita maxima OX=3661 GN=LOC111469554 PE=4 SV=1)

HSP 1 Score: 162.5 bits (410), Expect = 1.4e-36
Identity = 104/200 (52.00%), Postives = 120/200 (60.00%), Query Frame = 0


Query: 1   MSFSWLVKSPKK--EDEQQVPNSIWDDDFKAFFELTDEENPPPPMQPDY----------- 60
           M +S L+K  KK  E+EQ+VPNSI  DDFKAFFEL++EE  P   Q ++           
Sbjct: 1   MGYSSLLKGLKKEEEEEQEVPNSI-RDDFKAFFELSNEEKLPLQQQENFSIVNGGSLNWD 60

Query: 61  -----------------------------------------RFHDHGVMESKKKAASLNL 120
                                                     F   GVM+SKKK ASLNL
Sbjct: 61  LMDHHSNHQFSLSETKTNHGGHGDGVEAEAEVFSRVVPKACSFDGDGVMKSKKK-ASLNL 120

Query: 121 NLNCDEVLEAWSGRGSLWAAASSLSNDPTHDPYMGEVPRMEEERTRRVMRYKEKRNTRLF 147
           NLN +EV EAWSGRGSLWAA  S  ++PTH+ YMGEVPRMEEERTRRV+RY+EKR TRLF
Sbjct: 121 NLNYEEVSEAWSGRGSLWAAGGSSPSNPTHNVYMGEVPRMEEERTRRVLRYREKRLTRLF 180

[Close]

BLAST of HG10021780 vs. ExPASy TrEMBL
Match: A0A6J1DMX8 (zinc finger protein CONSTANS-LIKE 6 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111022043 PE=4 SV=1)

HSP 1 Score: 142.1 bits (357), Expect = 1.9e-30
Identity = 95/193 (49.22%), Postives = 115/193 (59.59%), Query Frame = 0


Query: 1   MSFSWLVKSPKKEDEQQVPNSIWDDDFKAFFELTDEENPPPPMQPDYRFHDHG------- 60
           M +SW +KSP KE+EQ+VPN     DF+AF E   ++ PPPP + +  F  +G       
Sbjct: 1   MGYSWFLKSP-KEEEQEVPNGAVKGDFEAFLE---DKLPPPPPEAEDNFLAYGGPPDWGL 60

Query: 61  ----------------VMESKKKAA----------------------SLNLNLNCDEVLE 120
                           ++ + ++AA                      SL LNLN +EVLE
Sbjct: 61  NFDYEYFPVPVLSQTNIVGANEEAAAAAAFGRVSDDGDGRKKEEEEISLKLNLNYEEVLE 120

Query: 121 AWSGRGSLWAAA--SSLSNDPTHDPYMGEVPRMEEERTRRVMRYKEKRNTRLFSKKIRYQ 147
           AWSGRGSLWAAA  SSLSN  T+  YMGEVPR+EEER RRV+RYKEKR+ RLFS KIRYQ
Sbjct: 121 AWSGRGSLWAAADDSSLSN-LTNAAYMGEVPRIEEERRRRVLRYKEKRHNRLFSNKIRYQ 180

[Close]

BLAST of HG10021780 vs. ExPASy TrEMBL
Match: A0A2N9FHK6 (CCT domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS14555 PE=4 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 1.4e-25
Identity = 79/142 (55.63%), Postives = 100/142 (70.42%), Query Frame = 0


Query: 10  PKK--EDEQQVPNSIWDDDFKAFFELTDEENPPPPMQPDYRFHDHGVMESKKKAASLNLN 69
           PK+  EDE +    ++++  + FFE  +EE+       D +  + GV++  +  ASLNLN
Sbjct: 76  PKREGEDEDEEEQKVFENTKQCFFE--EEES---YYSKDIKRENIGVLDDDEMRASLNLN 135

Query: 70  LNCDEVLEAWSGRGSLWAAASSLSNDPTHDPYMGEVPRMEEERTRR---VMRYKEKRNTR 129
           LN +EVL+AWS RGSLWA  SS S   ++  YMGEVP MEEERTRR   V+RYKEKR TR
Sbjct: 136 LNYEEVLDAWSNRGSLWADDSSPSM-ASNGNYMGEVPVMEEERTRREASVLRYKEKRQTR 195

Query: 130 LFSKKIRYQVRKLNAEKRPRIK 147
           LFSKKIRYQVRKLNA+KRPR+K
Sbjct: 196 LFSKKIRYQVRKLNADKRPRLK 211

[Close]

BLAST of HG10021780 vs. TAIR 10
Match: AT1G07050.1 (CCT motif family protein )

HSP 1 Score: 86.3 bits (212), Expect = 2.4e-17
Identity = 56/129 (43.41%), Postives = 75/129 (58.14%), Query Frame = 0


Query: 23  WDDDFKAFFELTDEENPPPPMQPDYRFHDHGVMESKKKAASLNLNLNCDEVLEAWSG-RG 82
           W++D        ++ +        + F ++   + + K   L LNLN  EV++AWS  + 
Sbjct: 63  WEEDEDEDVGEEEKRSSTDQEGSSFGFWENKPTDYEDKDLGLKLNLNHQEVIDAWSDHQK 122

Query: 83  SLWAAASSLSNDPTHDPYMGEVPRMEEERTRR----VMRYKEKRNTRLFSKKIRYQVRKL 142
            LW   S+L N      Y GEVP +EE+R  R    V+RYKEKR +RLFSKKIRYQVRKL
Sbjct: 123 PLWTDTSTLDN----SVYRGEVPVIEEKRNMRREASVLRYKEKRQSRLFSKKIRYQVRKL 182

Query: 143 NAEKRPRIK 147
           NA+KRPR K
Sbjct: 183 NADKRPRFK 187

[Close]

BLAST of HG10021780 vs. TAIR 10
Match: AT5G14370.1 (CCT motif family protein )

HSP 1 Score: 70.5 bits (171), Expect = 1.4e-12
Identity = 45/103 (43.69%), Postives = 60/103 (58.25%), Query Frame = 0


Query: 63  SLNLNLNCDEVLEAWSGRGSLWA------------AASSLSNDPTHDPYMGEVPRMEE-- 122
           SL L L+ ++++EAWS +G+L+             A++   ND      +  VP ME   
Sbjct: 228 SLALKLDYEQIMEAWSDKGTLYVDGEPPQTVPDLHASADGFNDGGEAGNLWAVPEMETTE 287

Query: 123 -----ERTRRVMRYKEKRNTRLFSKKIRYQVRKLNAEKRPRIK 147
                 R   ++RYKEKR  RLFSK+IRYQVRKLNAEKRPR+K
Sbjct: 288 RLWRGHREASLLRYKEKRQNRLFSKRIRYQVRKLNAEKRPRVK 330

[Close]

BLAST of HG10021780 vs. TAIR 10
Match: AT1G68520.1 (B-box type zinc finger protein with CCT domain )

HSP 1 Score: 69.7 bits (169), Expect = 2.3e-12
Identity = 50/118 (42.37%), Postives = 62/118 (52.54%), Query Frame = 0


Query: 53  GVMESKKKAASLNLNLNCDEVLEAWSGRGSLWAA--ASSLSND----PTHDPYMGEVPRM 112
           G ++ +KK  +L L L+ + V+  W G+G  W A   S +  D    PTH   MGE    
Sbjct: 278 GGIKEEKKEKALMLRLDYESVISTWGGQGIPWTARVPSEIDLDMVCFPTHT--MGESGAE 337

Query: 113 EEE------------------RTRRVMRYKEKRNTRLFSKKIRYQVRKLNAEKRPRIK 147
                                R  RV RY+EKR TRLFSKKIRY+VRKLNAEKRPR+K
Sbjct: 338 AHHHNHFRGLGLHLGDAGDGGREARVSRYREKRRTRLFSKKIRYEVRKLNAEKRPRMK 393

[Close]

BLAST of HG10021780 vs. TAIR 10
Match: AT1G73870.1 (B-box type zinc finger protein with CCT domain )

HSP 1 Score: 68.9 bits (167), Expect = 3.9e-12
Identity = 56/156 (35.90%), Postives = 72/156 (46.15%), Query Frame = 0


Query: 13  EDEQQVPNSIWDDDFKAFFELTDEENPPPPMQPDYRFHDHGVMESKKKAASLNLNLNCDE 72
           ++E +V   I   D K   +  +EE          +  D      K +  SL L L+   
Sbjct: 226 KEENKVGFEINCKDLKRVKDEDEEEEEAKCENGGSKDSDREASNDKDRKTSLFLRLDYGA 285

Query: 73  VLEAWSGRGSLWAAA---SSLSNDPTHDPYM-----------GEVPRM--------EEER 132
           V+ AW   GS W        +    T  P++           G V R         + ER
Sbjct: 286 VISAWDNHGSPWKTGIKPECMLGGNTCLPHVVGGYEKLMSSDGSVTRQQGRDGGGSDGER 345

Query: 133 TRRVMRYKEKRNTRLFSKKIRYQVRKLNAEKRPRIK 147
             RV+RYKEKR TRLFSKKIRY+VRKLNAE+RPRIK
Sbjct: 346 EARVLRYKEKRRTRLFSKKIRYEVRKLNAEQRPRIK 381

[Close]

BLAST of HG10021780 vs. TAIR 10
Match: AT4G25990.2 (CCT motif family protein )

HSP 1 Score: 67.8 bits (164), Expect = 8.8e-12
Identity = 44/86 (51.16%), Postives = 56/86 (65.12%), Query Frame = 0


Query: 66  LNLNCDEVLEAWSGRGSLWA--AASSLSNDPTHDPYMGEVPRMEEE--RTRRVMRYKEKR 125
           L L+ D VLEAWSG+ S ++     S ++       +GE+    E   R   V+RYKEKR
Sbjct: 293 LKLDYDGVLEAWSGKESPFSDEILGSDADGVDFHVRLGEIDLFGESGMREASVLRYKEKR 352

Query: 126 NTRLFSKKIRYQVRKLNAEKRPRIKV 148
             RLFSKKIRYQVRKLNA++RPR+KV
Sbjct: 353 RNRLFSKKIRYQVRKLNADQRPRMKV 378

The following BLAST results are available for this feature:

BLAST of HG10021780 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038893945.1	2.8e-60	84.56	zinc finger protein CONSTANS-LIKE 7 isoform X2 [Benincasa hispida]	[more]
XP_038893946.1	2.8e-60	84.56	zinc finger protein CONSTANS-LIKE 7 isoform X3 [Benincasa hispida]	[more]
XP_038893944.1	2.8e-60	84.56	zinc finger protein CONSTANS-LIKE 16 isoform X1 [Benincasa hispida]	[more]
KGN65847.1	1.8e-46	70.51	hypothetical protein Csa_023240 [Cucumis sativus]	[more]
XP_023520167.1	4.2e-40	54.27	zinc finger protein CONSTANS-LIKE 6 [Cucurbita pepo subsp. pepo]	[more]

BLAST of HG10021780 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LG76	3.3e-11	42.37	Zinc finger protein CONSTANS-LIKE 6 OS=Arabidopsis thaliana OX=3702 GN=COL6 PE=2...	[more]
Q9C9A9	5.6e-11	35.90	Zinc finger protein CONSTANS-LIKE 7 OS=Arabidopsis thaliana OX=3702 GN=COL7 PE=2...	[more]
Q8RWD0	2.8e-10	46.67	Zinc finger protein CONSTANS-LIKE 16 OS=Arabidopsis thaliana OX=3702 GN=COL16 PE...	[more]
Q9LU68	1.8e-09	45.16	Protein CHLOROPLAST IMPORT APPARATUS 2 OS=Arabidopsis thaliana OX=3702 GN=CIA2 P...	[more]
Q9M9B3	3.4e-08	45.57	Zinc finger protein CONSTANS-LIKE 8 OS=Arabidopsis thaliana OX=3702 GN=COL8 PE=1...	[more]

BLAST of HG10021780 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LYC0	8.5e-47	70.51	CCT domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G533540 PE=4 SV...	[more]
A0A6J1HJ00	2.9e-39	52.74	zinc finger protein CONSTANS-LIKE 6 OS=Cucurbita moschata OX=3662 GN=LOC11146488...	[more]
A0A6J1I4F9	1.4e-36	52.00	zinc finger protein CONSTANS-LIKE 6 OS=Cucurbita maxima OX=3661 GN=LOC111469554 ...	[more]
A0A6J1DMX8	1.9e-30	49.22	zinc finger protein CONSTANS-LIKE 6 isoform X1 OS=Momordica charantia OX=3673 GN...	[more]
A0A2N9FHK6	1.4e-25	55.63	CCT domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS14555 PE=4...	[more]

BLAST of HG10021780 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G07050.1	2.4e-17	43.41	CCT motif family protein	[more]
AT5G14370.1	1.4e-12	43.69	CCT motif family protein	[more]
AT1G68520.1	2.3e-12	42.37	B-box type zinc finger protein with CCT domain	[more]
AT1G73870.1	3.9e-12	35.90	B-box type zinc finger protein with CCT domain	[more]
AT4G25990.2	8.8e-12	51.16	CCT motif family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010402	CCT domain	PFAM	PF06203	CCT	coord: 110..146 e-value: 2.7E-14 score: 53.0
IPR010402	CCT domain	PROSITE	PS51017	CCT	coord: 110..152 score: 12.907565
None	No IPR available	PANTHER	PTHR31874	CCT MOTIF FAMILY PROTEIN, EXPRESSED	coord: 54..149
None	No IPR available	PANTHER	PTHR31874:SF41	CCT MOTIF FAMILY PROTEIN	coord: 54..149

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10021780.1	HG10021780.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0005515	protein binding