HG10021773 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10021773
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	transcription initiation factor TFIID subunit 15b-like
Location	Chr05: 16433754 .. 16437227 (-)
RNA-Seq Expression	HG10021773
Synteny	HG10021773

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTGGTATGTACGATCAAGGAGGAGACGCTGCTCCGTCTTACGGAGCACCTGGAGGCGGTGGAGGCTACGGTGGTGGAGGTGGAGGCTACGGAGGCGGTGGTGGTACAGGCTATGGTGGAAAGGGCGGTGACGGTGGATATGGCGGCGGAGGCAGGGGCGGCGGCGGTGGCGGAAGAGGCTATGGAGGACGAGGTGGCGGCGGAGGCGGAGGCGGAGGCTACGGTGGTCGAGGTATGTACTTTTCTTTTGTCCTTAAATTTCTTATTATTATTTTATCTTAATCGTTTAGTGACAAGAATTTCTGAGGTTAAGGAAGTTTCTTGTTTAGAAGCAATTTAGGATTTTTATCCTTTATTTTCAATTCTTGTTTGGAAGACTTTCTTTTAGGTTTGTTGTTCGACGATGTTATTGCTCTGTATTGCTTTGGAAAGGTTTATTTATTGCTATTGGGTGGGGTGTGCGACTTGTATTTGGAAAGTAAATTTCCAGCGATCAGATCTAACTGTGAAGCTAACAGTGAATTGTTTTTGTTCCCCTCTAAAGAGTTACATGTTCTTCCTCGTCTCAGTTTCTTTATGTGCCTTTTGTTTTGATCCAAACTAGGTGGCGGAGGCGGATATCAAGGAGGAGATCGAGGAGGGCGAGGTGCTGGACGTGGTGGTGGAGGTGGTCGTGGCGGAAGTGGCAGAGATGGGGATTGGGTCTGCCCTAATCCTGGGTAGGTTTTGTCCCTTCTTCGTCTATTACTGAGTTCTTTTGTTTTATTTCATTTTCATGGGTACACTGAACGGCTCCCCATCCCTAAATGCATAAATATTAGACATTTATATGGGGAACTTGTATTATGTTTGTTAGCTAAGTTCATGATTGAAACTGATGTTTTGTTCTGTTTTTGCCATATAGCTGTGGAAATTTGAACTTTGCTAGAAGAGTGGAGTGTAATAAGTGTGGTGCACCCTCACCTGGGGGTGCTAGCGATCGAAGTGGTGGCGGTGGTGGTGGTTATAACAGAGGTGGAGCTGATGGGGGTTACAGTGGCAATCGTAATGGCAGAGGTGGTAGTTTCCATGGTGGTAGAAGTGGAACTCATGATGGAGGTAGAAGTGAAGGTGGGAACAGAGGTGGTAATTCTTATGGTGGTCATCAGGGAGGAGAAGATAGTGGGTACAGTCAGGTTCCCCCGTCCTCGGCACCCTCATCTGGTGTTCTTGCTGGCTCTTATCCACCATCTTACCATGCTGGAAGTGCAGATTACGGGACTGATGCAGTTCCTCCTCCTGCAAGTTACAGTGGAACTACATATCCTCCAAATTATGGTGGTCCCACTGGTGGCTATGGTGGTGATAATCTAGGTGATGGGCGTGGTACTGCTGGTCGGGGTGGGCCATCAGCTGGATATGATGGTGGCTACAATGCGGGTGGTAGAGGTGGCTATAATGCTGGTGGTAGAGGAGGAGGAAGCTATAATGCCAGTGGTGGTAGAGGTGGTGGTTATGGAAGTACACCGGCAGCAGAGCCAGCACAGGTTAAACAGTGTGATGATAATTGTGATGATTCGTGTGATAACTCTAGAATCTATGTATCTAATTTGCCACCAGATGTGACCATTGATGAATTGAGAGAACTATTTGGTGGAATTGGTCAAGTAAGTAACCTTCTCTTAAGCTATATTCTGTTGCTTCAGGTATTCTATCCTTGTTGGAGTGGGTATCATATGATCGTTAATTCCTTTTTAGACAATGTATAGACTTTCAAACCATATTTCCATGTTTAGAAAGTTGACTTTTGATTACGAGGCAATTGTTTGTGGTAAGCTCTTATAGAGCTAGTTCTATTCTCCTTGCCAATGAAGTGTCTACAATTGATATTCTGTCTTCTCTAAAATGTGTCAGTATATACTATTCCTGATTGTTAGTTCATCCTTTCTTAATAATGAGTATACTTTCATCTGTTTTCTAAATGAATGATCTTTTCATGTTCAGAAGTTGTGTTAAAGAATTCTGTTTGAGATGTTTGTTAATGATTTGGAGGTTTTGTAGGGCTAGCTCTATTCTTATTGGCAATAAACAGGCTTTTGTTTCTCAAGTTCTGAAGAATCTTTTTTCAGAAGTGACCTTTGCATATAGCATCAAATATTAAACTGTTTTATTGAAGCCATTTTTGCATTTTCAATTTGAAGATTGGAAGAATCAAGCAGAAGAGGGGCTACAAGGATCAGTGGCCTTGGAACATAAAAATATATACAGATGAGATGGGAAATAACAAAGGCGATGCATGTGTATCATATGAAGATCCCTCGGCAGCACATTCTGCTGGCGGTTTCTATAACAGTAACTACTGTGCTCCTATAGTATTATAAGAACAATATTAGCTATTATGGTTTTAATTTTAGTTTGAACCTCTCTATGATACAATTTTTCAATGATCATATTTTTGTAACCTCAGATTATGATTTGAGAGGCTATAACATCAATGTTGCAATGGCTGAGAAGTCAGCACCGAGGGCTCCACCTACATACAACCATGGGTACTTGCTTTGCCATTATTCTTTCAAAACAAATAGAGAAATCTGAGTACAGAGTTTAGGCATGCGTATATCTGAACATGTACTTATTAGTTCTTTCTTGGTGTTTGTTGATAAGGCTGAGAATTTGACAATTGGTATTACCTCTTTCTTATACACATACACAGGCAGGAAAAGATTCTCGTTGGCAGAATCAGGATAGGACAAGTTATACTTTTGTCCAATATTCGATACTGTTTGATATCCCTTGAGCTCATGTTATGTATTCAATACTGTTTGATATCCCCTGAGTTCATGTTATATAGGAACTATCAGCGATATACTTTGTTTTGATTTTTTGCTCTGAGATCCCAACATATTTGAGAATTAGGCTTTGAATTAAATTAGCCTGTCCTACCCTTTTTAGTAGGAATGTTGTGTATTAGTCTTTTTACTGTTTAGAAGGAATTATTAGTCTTTTAGTAGGTCACCCGTTTCCTTGTTCTTGAGTGCGGGGGTGGATATTTTTATCTTCTCCTCCTTTTGTGCCAATATTCTTAGATAAAGATATTTGAACTGATTCATTTATTATGTAGAGGAATACTTGGGTGTATTTTGGGCTGCACTCATCTTTTTGCAGCTCACTTCAACCTCAATAGAAATAATTAAAAGAATTTTAGAAAAAATGGAAAGAAGATTTTGACATATAGGAACTGTGATTGGACAATTGTTTGGGATGGGAATACGGGTGTAGCTTAAGATGCACCCTAGTTTTTTTTTCATATATAATTATTATGCTTTAGAAAATATTACGTATTGCACTTCATAAATTGTCCTTTCATGTTGCAGTGGTGGTGGTAGAGGTGGATATGGAGGTGGTGGAGATAGGCGCAGAGATAGCTATAGAGATGGAGGCTCTGGACCTGATAGACATCAGCATGGTGGAAATCGATCCCGTCCTTACTGA

mRNA sequence

ATGTCTGGTATGTACGATCAAGGAGGAGACGCTGCTCCGTCTTACGGAGCACCTGGAGGCGGTGGAGGCTACGGTGGTGGAGGTGGAGGCTACGGAGGCGGTGGTGGTACAGGCTATGGTGGAAAGGGCGGTGACGGTGGATATGGCGGCGGAGGCAGGGGCGGCGGCGGTGGCGGAAGAGGCTATGGAGGACGAGGTGGCGGCGGAGGCGGAGGCGGAGGCTACGGTGGTCGAGGTGGCGGAGGCGGATATCAAGGAGGAGATCGAGGAGGGCGAGGTGCTGGACGTGGTGGTGGAGGTGGTCGTGGCGGAAGTGGCAGAGATGGGGATTGGGTCTGCCCTAATCCTGGCTGTGGAAATTTGAACTTTGCTAGAAGAGTGGAGTGTAATAAGTGTGGTGCACCCTCACCTGGGGGTGCTAGCGATCGAAGTGGTGGCGGTGGTGGTGGTTATAACAGAGGTGGAGCTGATGGGGGTTACAGTGGCAATCGTAATGGCAGAGGTGGTAGTTTCCATGGTGGTAGAAGTGGAACTCATGATGGAGGTAGAAGTGAAGGTGGGAACAGAGGTGGTAATTCTTATGGTGGTCATCAGGGAGGAGAAGATAGTGGGTACAGTCAGGTTCCCCCGTCCTCGGCACCCTCATCTGGTGTTCTTGCTGGCTCTTATCCACCATCTTACCATGCTGGAAGTGCAGATTACGGGACTGATGCAGTTCCTCCTCCTGCAAGTTACAGTGGAACTACATATCCTCCAAATTATGGTGGTCCCACTGGTGGCTATGGTGGTGATAATCTAGGTGATGGGCGTGGTACTGCTGGTCGGGGTGGGCCATCAGCTGGATATGATGGTGGCTACAATGCGGGTGGTAGAGGTGGCTATAATGCTGGTGGTAGAGGAGGAGGAAGCTATAATGCCAGTGGTGGTAGAGGTGGTGGTTATGGAAGTACACCGGCAGCAGAGCCAGCACAGGTTAAACAGTGTGATGATAATTGTGATGATTCGTGTGATAACTCTAGAATCTATGTATCTAATTTGCCACCAGATGTGACCATTGATGAATTGAGAGAACTATTTGGTGGAATTGGTCAAATTGGAAGAATCAAGCAGAAGAGGGGCTACAAGGATCAGTGGCCTTGGAACATAAAAATATATACAGATGAGATGGGAAATAACAAAGGCGATGCATGTGTATCATATGAAGATCCCTCGGCAGCACATTCTGCTGGCGGTTTCTATAACAATTATGATTTGAGAGGCTATAACATCAATGTTGCAATGGCTGAGAAGTCAGCACCGAGGGCTCCACCTACATACAACCATGGTGGTGGTGGTAGAGGTGGATATGGAGGTGGTGGAGATAGGCGCAGAGATAGCTATAGAGATGGAGGCTCTGGACCTGATAGACATCAGCATGGTGGAAATCGATCCCGTCCTTACTGA

Coding sequence (CDS)

ATGTCTGGTATGTACGATCAAGGAGGAGACGCTGCTCCGTCTTACGGAGCACCTGGAGGCGGTGGAGGCTACGGTGGTGGAGGTGGAGGCTACGGAGGCGGTGGTGGTACAGGCTATGGTGGAAAGGGCGGTGACGGTGGATATGGCGGCGGAGGCAGGGGCGGCGGCGGTGGCGGAAGAGGCTATGGAGGACGAGGTGGCGGCGGAGGCGGAGGCGGAGGCTACGGTGGTCGAGGTGGCGGAGGCGGATATCAAGGAGGAGATCGAGGAGGGCGAGGTGCTGGACGTGGTGGTGGAGGTGGTCGTGGCGGAAGTGGCAGAGATGGGGATTGGGTCTGCCCTAATCCTGGCTGTGGAAATTTGAACTTTGCTAGAAGAGTGGAGTGTAATAAGTGTGGTGCACCCTCACCTGGGGGTGCTAGCGATCGAAGTGGTGGCGGTGGTGGTGGTTATAACAGAGGTGGAGCTGATGGGGGTTACAGTGGCAATCGTAATGGCAGAGGTGGTAGTTTCCATGGTGGTAGAAGTGGAACTCATGATGGAGGTAGAAGTGAAGGTGGGAACAGAGGTGGTAATTCTTATGGTGGTCATCAGGGAGGAGAAGATAGTGGGTACAGTCAGGTTCCCCCGTCCTCGGCACCCTCATCTGGTGTTCTTGCTGGCTCTTATCCACCATCTTACCATGCTGGAAGTGCAGATTACGGGACTGATGCAGTTCCTCCTCCTGCAAGTTACAGTGGAACTACATATCCTCCAAATTATGGTGGTCCCACTGGTGGCTATGGTGGTGATAATCTAGGTGATGGGCGTGGTACTGCTGGTCGGGGTGGGCCATCAGCTGGATATGATGGTGGCTACAATGCGGGTGGTAGAGGTGGCTATAATGCTGGTGGTAGAGGAGGAGGAAGCTATAATGCCAGTGGTGGTAGAGGTGGTGGTTATGGAAGTACACCGGCAGCAGAGCCAGCACAGGTTAAACAGTGTGATGATAATTGTGATGATTCGTGTGATAACTCTAGAATCTATGTATCTAATTTGCCACCAGATGTGACCATTGATGAATTGAGAGAACTATTTGGTGGAATTGGTCAAATTGGAAGAATCAAGCAGAAGAGGGGCTACAAGGATCAGTGGCCTTGGAACATAAAAATATATACAGATGAGATGGGAAATAACAAAGGCGATGCATGTGTATCATATGAAGATCCCTCGGCAGCACATTCTGCTGGCGGTTTCTATAACAATTATGATTTGAGAGGCTATAACATCAATGTTGCAATGGCTGAGAAGTCAGCACCGAGGGCTCCACCTACATACAACCATGGTGGTGGTGGTAGAGGTGGATATGGAGGTGGTGGAGATAGGCGCAGAGATAGCTATAGAGATGGAGGCTCTGGACCTGATAGACATCAGCATGGTGGAAATCGATCCCGTCCTTACTGA

Protein sequence

MSGMYDQGGDAAPSYGAPGGGGGYGGGGGGYGGGGGTGYGGKGGDGGYGGGGRGGGGGGRGYGGRGGGGGGGGGYGGRGGGGGYQGGDRGGRGAGRGGGGGRGGSGRDGDWVCPNPGCGNLNFARRVECNKCGAPSPGGASDRSGGGGGGYNRGGADGGYSGNRNGRGGSFHGGRSGTHDGGRSEGGNRGGNSYGGHQGGEDSGYSQVPPSSAPSSGVLAGSYPPSYHAGSADYGTDAVPPPASYSGTTYPPNYGGPTGGYGGDNLGDGRGTAGRGGPSAGYDGGYNAGGRGGYNAGGRGGGSYNASGGRGGGYGSTPAAEPAQVKQCDDNCDDSCDNSRIYVSNLPPDVTIDELRELFGGIGQIGRIKQKRGYKDQWPWNIKIYTDEMGNNKGDACVSYEDPSAAHSAGGFYNNYDLRGYNINVAMAEKSAPRAPPTYNHGGGGRGGYGGGGDRRRDSYRDGGSGPDRHQHGGNRSRPY

Homology

[Close]

BLAST of HG10021773 vs. NCBI nr
Match: XP_008457317.1 (PREDICTED: transcription initiation factor TFIID subunit 15b isoform X1 [Cucumis melo])

HSP 1 Score: 776.9 bits (2005), Expect = 9.8e-221
Identity = 459/491 (93.48%), Postives = 464/491 (94.50%), Query Frame = 0


Query: 1   MSGMYDQGGDAAPSYGAPGGGGGYGGGGGG---YGGGGGTGYGGKGGDGGYGGGGR-GGG 60
           MSGMYDQGGDAAPSYGAPGGGGGYGGGGGG    GGGGG GYGGKGGDGGYGGGGR GGG
Sbjct: 1   MSGMYDQGGDAAPSYGAPGGGGGYGGGGGGGGYGGGGGGAGYGGKGGDGGYGGGGRGGGG 60

Query: 61  GGGRGYGGRGGGGGGG-GGYGGRGG------GGGYQGGDRGGRGAGRGGGGGRGGSGRDG 120
           GGGRGYGGRGGGGGGG GG GG GG      GGGYQGGDRGGRGAGRGGGGGRGGSGRDG
Sbjct: 61  GGGRGYGGRGGGGGGGYGGRGGGGGYQGGDRGGGYQGGDRGGRGAGRGGGGGRGGSGRDG 120

Query: 121 DWVCPNPGCGNLNFARRVECNKCGAPSPGGASDRSGGGGGGYNRGGADGGYSGNRNGRGG 180
           DWVCPNPGCGNLNFARRVECNKCGAPSPGGASDR GGGGGGYNRGG D GY G+RNGRGG
Sbjct: 121 DWVCPNPGCGNLNFARRVECNKCGAPSPGGASDRGGGGGGGYNRGGGDSGYGGSRNGRGG 180

Query: 181 SFHGGRSGTHDGGRSEGGNRGGNSYGGHQGGEDSGYSQVPPSSAPSSGVLAGSYPPSYHA 240
           SFHGGRSGTHDGGR+EGG+RGGNSYGGHQGGEDSGY QVPPSSAPSSG LAGSYPPSYH 
Sbjct: 181 SFHGGRSGTHDGGRNEGGSRGGNSYGGHQGGEDSGYGQVPPSSAPSSGGLAGSYPPSYHG 240

Query: 241 GSADYGTDAVPPPASYSGTTYPPNYGGPTGGYGGDNLGDGRGTAGRGGPSAGYDGGYNAG 300
           GSADYGTDAVPPPASYSGTTYPP YGGPTGGYGGD+LGDGRG AGRGGPS GYDGGYNAG
Sbjct: 241 GSADYGTDAVPPPASYSGTTYPPTYGGPTGGYGGDSLGDGRGAAGRGGPSGGYDGGYNAG 300

Query: 301 GRGGYNAGGRGGGSYNASGGRGGGYGSTPAAEPAQVKQCDDNCDDSCDNSRIYVSNLPPD 360
           GRGGYNAGGR GGSYNASGGRGGGYGST AAEPAQVKQCDDNCDDSCDNSRIYVSNLPPD
Sbjct: 301 GRGGYNAGGR-GGSYNASGGRGGGYGSTQAAEPAQVKQCDDNCDDSCDNSRIYVSNLPPD 360

Query: 361 VTIDELRELFGGIGQIGRIKQKRGYKDQWPWNIKIYTDEMGNNKGDACVSYEDPSAAHSA 420
           VTIDELRELFGGIGQIGRIKQKRGYKDQWPWNIKIYTDEMGNNKGDACVSYEDPSAAHSA
Sbjct: 361 VTIDELRELFGGIGQIGRIKQKRGYKDQWPWNIKIYTDEMGNNKGDACVSYEDPSAAHSA 420

Query: 421 GGFYNNYDLRGYNINVAMAEKSAPRAPPTYNHGGGGRGGYGGGGDRRRDSYRDGGSGPDR 480
           GGFYNNYDLRGY+INVAMAEKSAPRAPPTYNHGGGGRGGYGGGGDRRRDSYRDGGSGPDR
Sbjct: 421 GGFYNNYDLRGYSINVAMAEKSAPRAPPTYNHGGGGRGGYGGGGDRRRDSYRDGGSGPDR 480

[Close]

BLAST of HG10021773 vs. NCBI nr
Match: XP_038894092.1 (transcription initiation factor TFIID subunit 15b [Benincasa hispida])

HSP 1 Score: 771.9 bits (1992), Expect = 3.2e-219
Identity = 454/484 (93.80%), Postives = 461/484 (95.25%), Query Frame = 0


Query: 1   MSGMYDQGGDAAPSYGAPGGGGGYGGGGGGYGGGGGTGYGGKGGDGGYGGGGRGGGGGGR 60
           MSGMYDQGGDAAPSYGAPGGGGGYGGGGGG G GGG   GGKGGDGGYGGGGR GGGGGR
Sbjct: 1   MSGMYDQGGDAAPSYGAPGGGGGYGGGGGGGGYGGG---GGKGGDGGYGGGGR-GGGGGR 60

Query: 61  GYGGRGGGGGG--GGGYGGRGGGGGYQGGDRGGRGAGRGGGGGRGGSGRDGDWVCPNPGC 120
           GYGGRGGGGGG  GG  GG GGGGGYQGGDRGGRGAGR GGGGRGGSGRDGDWVCPNPGC
Sbjct: 61  GYGGRGGGGGGGYGGRGGGGGGGGGYQGGDRGGRGAGRSGGGGRGGSGRDGDWVCPNPGC 120

Query: 121 GNLNFARRVECNKCGAPSPGGASDRS--GGGGGGYNRGGADGGYSGNRNGRGGSFHGGRS 180
           GNLNFARRVECNKCGAPSPGGASDRS  GGGGGGYNRGGADGGY GNRNGRGGS+HGGRS
Sbjct: 121 GNLNFARRVECNKCGAPSPGGASDRSGGGGGGGGYNRGGADGGYGGNRNGRGGSYHGGRS 180

Query: 181 GTHDGGRSEGGNRGGNSYGGHQGGEDSGYSQVPPSSAPSSGVLAGSYPPSYHAGSADYGT 240
           G HDGGR+EGGNRGGNS+GGHQGGEDS Y QVPPSSAPSSG LAGSYPPSYHAG+ADYGT
Sbjct: 181 GAHDGGRNEGGNRGGNSFGGHQGGEDSRYGQVPPSSAPSSGGLAGSYPPSYHAGTADYGT 240

Query: 241 DAVPPPASYSGTTYPPNYGGPTGGYGGDNLGDGRGTAGRGGPSAGYDGGYNAGGRGGYNA 300
           DAVPPPASYSGTTYPP+YG PTGGYGGD+LGDGRG AGRGGPS GYDGGYNAGGRGGYNA
Sbjct: 241 DAVPPPASYSGTTYPPSYGAPTGGYGGDSLGDGRGAAGRGGPSGGYDGGYNAGGRGGYNA 300

Query: 301 GGRGGGSYNASGGRGGGYGSTPAAEPAQVKQCDDNCDDSCDNSRIYVSNLPPDVTIDELR 360
           GGRGGGSYNASGGRGGGYGSTP AEPAQVKQCDDNCDDSCDNSRIYVSNLPPDVTIDELR
Sbjct: 301 GGRGGGSYNASGGRGGGYGSTPTAEPAQVKQCDDNCDDSCDNSRIYVSNLPPDVTIDELR 360

Query: 361 ELFGGIGQIGRIKQKRGYKDQWPWNIKIYTDEMGNNKGDACVSYEDPSAAHSAGGFYNNY 420
           ELFGGIGQIGRIKQKRGYKDQWPWNIKIYTDEMGNNKGDACVSYEDPSAAHSAGGFYNNY
Sbjct: 361 ELFGGIGQIGRIKQKRGYKDQWPWNIKIYTDEMGNNKGDACVSYEDPSAAHSAGGFYNNY 420

Query: 421 DLRGYNINVAMAEKSAPRAPPTYNHGGGGRGGYGGGGDRRRDSYRDGGSGPDRHQHGGNR 480
           DLRGY+INVAMAEKSAPRAPPTYNHGGGGRGGYGGGGDRRRDSYRDGGSGPDRHQHGGNR
Sbjct: 421 DLRGYSINVAMAEKSAPRAPPTYNHGGGGRGGYGGGGDRRRDSYRDGGSGPDRHQHGGNR 480

[Close]

BLAST of HG10021773 vs. NCBI nr
Match: XP_011658817.1 (transcription initiation factor TFIID subunit 15b [Cucumis sativus])

HSP 1 Score: 771.5 bits (1991), Expect = 4.1e-219
Identity = 456/492 (92.68%), Postives = 462/492 (93.90%), Query Frame = 0


Query: 1   MSGMYDQGGDAAPSYGAPGGGGGY--GGGGGGYGGGGGTGYGGKGGDGGYGGGGR---GG 60
           MSGMYDQGGDAAPSYGAPGGGGGY  GGGGGGYGGGGG GYGGKGGDGGYGGGGR   GG
Sbjct: 1   MSGMYDQGGDAAPSYGAPGGGGGYGGGGGGGGYGGGGGAGYGGKGGDGGYGGGGRGGGGG 60

Query: 61  GGGGRGYGGRGGGG-----GGGGGYGGRGGGGGYQGGDRGGRGAGRGGGGGRGGSGRDGD 120
           GGGGRGYGGRGGGG     GGGGGY G   GGGYQGGDRGGRGAGRGGGGGRGGSGRDGD
Sbjct: 61  GGGGRGYGGRGGGGGYGGRGGGGGYQGGDRGGGYQGGDRGGRGAGRGGGGGRGGSGRDGD 120

Query: 121 WVCPNPGCGNLNFARRVECNKCGAPSPGGASDRS--GGGGGGYNRGGADGGYSGNRNGRG 180
           WVCPNPGCGNLNFARRVECNKCGAPSPGGASDRS  GGGGGGYNRGG D GY G+RNGRG
Sbjct: 121 WVCPNPGCGNLNFARRVECNKCGAPSPGGASDRSGGGGGGGGYNRGGGDSGYGGSRNGRG 180

Query: 181 GSFHGGRSGTHDGGRSEGGNRGGNSYGGHQGGEDSGYSQVPPSSAPSSGVLAGSYPPSYH 240
           GSFHGGRSGTHDGGR+EGG+RGGNSYGGHQGGEDSGY QVPPSSAPSSG LAGSYPPSYH
Sbjct: 181 GSFHGGRSGTHDGGRNEGGSRGGNSYGGHQGGEDSGYGQVPPSSAPSSGGLAGSYPPSYH 240

Query: 241 AGSADYGTDAVPPPASYSGTTYPPNYGGPTGGYGGDNLGDGRGTAGRGGPSAGYDGGYNA 300
            GS+DYGTDAVPPPASYSGTTYPP YGGPTGGYGGD+LGDGRG A RGGPSAGYDGGYNA
Sbjct: 241 GGSSDYGTDAVPPPASYSGTTYPPTYGGPTGGYGGDSLGDGRGAAARGGPSAGYDGGYNA 300

Query: 301 GGRGGYNAGGRGGGSYNASGGRGGGYGSTPAAEPAQVKQCDDNCDDSCDNSRIYVSNLPP 360
           GGRGGYNAGGR GGSYNASGGR GGYGSTPAAEPAQVKQCDDNCDDSCDNSRIYVSNLPP
Sbjct: 301 GGRGGYNAGGR-GGSYNASGGRAGGYGSTPAAEPAQVKQCDDNCDDSCDNSRIYVSNLPP 360

Query: 361 DVTIDELRELFGGIGQIGRIKQKRGYKDQWPWNIKIYTDEMGNNKGDACVSYEDPSAAHS 420
           DVT DELRELFGGIGQIGRIKQKRGYKDQWPWNIKIYTDEMGNNKGDACVSYEDPSAAHS
Sbjct: 361 DVTTDELRELFGGIGQIGRIKQKRGYKDQWPWNIKIYTDEMGNNKGDACVSYEDPSAAHS 420

Query: 421 AGGFYNNYDLRGYNINVAMAEKSAPRAPPTYNHGGGGRGGYGGGGDRRRDSYRDGGSGPD 480
           AGGFYNNYDLRGY+INVAMAEKSAPRAPP YNHGGGGRGGYGGGGDRRRDSYRDGGSGPD
Sbjct: 421 AGGFYNNYDLRGYSINVAMAEKSAPRAPPAYNHGGGGRGGYGGGGDRRRDSYRDGGSGPD 480

[Close]

BLAST of HG10021773 vs. NCBI nr
Match: XP_016902120.1 (PREDICTED: transcription initiation factor TFIID subunit 15b isoform X2 [Cucumis melo])

HSP 1 Score: 770.0 bits (1987), Expect = 1.2e-218
Identity = 439/483 (90.89%), Postives = 444/483 (91.93%), Query Frame = 0


Query: 1   MSGMYDQGGDAAPSYGAPGGGGGYGGGGGG---YGGGGGTGYGGKGGDGGYGGGGRGGGG 60
           MSGMYDQGGDAAPSYGAPGGGGGYGGGGGG    GGGGG GYGGKGGDGGYGGGGRGGG 
Sbjct: 1   MSGMYDQGGDAAPSYGAPGGGGGYGGGGGGGGYGGGGGGAGYGGKGGDGGYGGGGRGGG- 60

Query: 61  GGRGYGGRGGGGGGGGGYGGRGGGGGYQGGDRGGRGAGRGGGGGRGGSGRDGDWVCPNPG 120
                                GGGGGYQGGDRGGRGAGRGGGGGRGGSGRDGDWVCPNPG
Sbjct: 61  ---------------------GGGGGYQGGDRGGRGAGRGGGGGRGGSGRDGDWVCPNPG 120

Query: 121 CGNLNFARRVECNKCGAPSPGGASDRSGGGGGGYNRGGADGGYSGNRNGRGGSFHGGRSG 180
           CGNLNFARRVECNKCGAPSPGGASDR GGGGGGYNRGG D GY G+RNGRGGSFHGGRSG
Sbjct: 121 CGNLNFARRVECNKCGAPSPGGASDRGGGGGGGYNRGGGDSGYGGSRNGRGGSFHGGRSG 180

Query: 181 THDGGRSEGGNRGGNSYGGHQGGEDSGYSQVPPSSAPSSGVLAGSYPPSYHAGSADYGTD 240
           THDGGR+EGG+RGGNSYGGHQGGEDSGY QVPPSSAPSSG LAGSYPPSYH GSADYGTD
Sbjct: 181 THDGGRNEGGSRGGNSYGGHQGGEDSGYGQVPPSSAPSSGGLAGSYPPSYHGGSADYGTD 240

Query: 241 AVPPPASYSGTTYPPNYGGPTGGYGGDNLGDGRGTAGRGGPSAGYDGGYNAGGRGGYNAG 300
           AVPPPASYSGTTYPP YGGPTGGYGGD+LGDGRG AGRGGPS GYDGGYNAGGRGGYNAG
Sbjct: 241 AVPPPASYSGTTYPPTYGGPTGGYGGDSLGDGRGAAGRGGPSGGYDGGYNAGGRGGYNAG 300

Query: 301 GRGGGSYNASGGRGGGYGSTPAAEPAQVKQCDDNCDDSCDNSRIYVSNLPPDVTIDELRE 360
           GR GGSYNASGGRGGGYGST AAEPAQVKQCDDNCDDSCDNSRIYVSNLPPDVTIDELRE
Sbjct: 301 GR-GGSYNASGGRGGGYGSTQAAEPAQVKQCDDNCDDSCDNSRIYVSNLPPDVTIDELRE 360

Query: 361 LFGGIGQIGRIKQKRGYKDQWPWNIKIYTDEMGNNKGDACVSYEDPSAAHSAGGFYNNYD 420
           LFGGIGQIGRIKQKRGYKDQWPWNIKIYTDEMGNNKGDACVSYEDPSAAHSAGGFYNNYD
Sbjct: 361 LFGGIGQIGRIKQKRGYKDQWPWNIKIYTDEMGNNKGDACVSYEDPSAAHSAGGFYNNYD 420

Query: 421 LRGYNINVAMAEKSAPRAPPTYNHGGGGRGGYGGGGDRRRDSYRDGGSGPDRHQHGGNRS 480
           LRGY+INVAMAEKSAPRAPPTYNHGGGGRGGYGGGGDRRRDSYRDGGSGPDRHQHGGNRS
Sbjct: 421 LRGYSINVAMAEKSAPRAPPTYNHGGGGRGGYGGGGDRRRDSYRDGGSGPDRHQHGGNRS 460

[Close]

BLAST of HG10021773 vs. NCBI nr
Match: XP_016902121.1 (PREDICTED: transcription initiation factor TFIID subunit 15b isoform X3 [Cucumis melo])

HSP 1 Score: 756.9 bits (1953), Expect = 1.1e-214
Identity = 436/480 (90.83%), Postives = 442/480 (92.08%), Query Frame = 0


Query: 1   MSGMYDQGGDAAPSYGAPGGGGGYGGGGGGYGGGGGTGYGGKGGDGGYGGGGRGGGGGGR 60
           MSGMYDQGGDAAPSYGAPGGGGGYGGGG                    GGGG GGGGGG 
Sbjct: 1   MSGMYDQGGDAAPSYGAPGGGGGYGGGG--------------------GGGGYGGGGGGA 60

Query: 61  GYGGRGGGGGGGGGYGGRGGGGGYQGGDRGGRGAGRGGGGGRGGSGRDGDWVCPNPGCGN 120
           GYGG+GG GG GG  GGRGGGGGYQGGDRGGRGAGRGGGGGRGGSGRDGDWVCPNPGCGN
Sbjct: 61  GYGGKGGDGGYGG--GGRGGGGGYQGGDRGGRGAGRGGGGGRGGSGRDGDWVCPNPGCGN 120

Query: 121 LNFARRVECNKCGAPSPGGASDRSGGGGGGYNRGGADGGYSGNRNGRGGSFHGGRSGTHD 180
           LNFARRVECNKCGAPSPGGASDR GGGGGGYNRGG D GY G+RNGRGGSFHGGRSGTHD
Sbjct: 121 LNFARRVECNKCGAPSPGGASDRGGGGGGGYNRGGGDSGYGGSRNGRGGSFHGGRSGTHD 180

Query: 181 GGRSEGGNRGGNSYGGHQGGEDSGYSQVPPSSAPSSGVLAGSYPPSYHAGSADYGTDAVP 240
           GGR+EGG+RGGNSYGGHQGGEDSGY QVPPSSAPSSG LAGSYPPSYH GSADYGTDAVP
Sbjct: 181 GGRNEGGSRGGNSYGGHQGGEDSGYGQVPPSSAPSSGGLAGSYPPSYHGGSADYGTDAVP 240

Query: 241 PPASYSGTTYPPNYGGPTGGYGGDNLGDGRGTAGRGGPSAGYDGGYNAGGRGGYNAGGRG 300
           PPASYSGTTYPP YGGPTGGYGGD+LGDGRG AGRGGPS GYDGGYNAGGRGGYNAGGR 
Sbjct: 241 PPASYSGTTYPPTYGGPTGGYGGDSLGDGRGAAGRGGPSGGYDGGYNAGGRGGYNAGGR- 300

Query: 301 GGSYNASGGRGGGYGSTPAAEPAQVKQCDDNCDDSCDNSRIYVSNLPPDVTIDELRELFG 360
           GGSYNASGGRGGGYGST AAEPAQVKQCDDNCDDSCDNSRIYVSNLPPDVTIDELRELFG
Sbjct: 301 GGSYNASGGRGGGYGSTQAAEPAQVKQCDDNCDDSCDNSRIYVSNLPPDVTIDELRELFG 360

Query: 361 GIGQIGRIKQKRGYKDQWPWNIKIYTDEMGNNKGDACVSYEDPSAAHSAGGFYNNYDLRG 420
           GIGQIGRIKQKRGYKDQWPWNIKIYTDEMGNNKGDACVSYEDPSAAHSAGGFYNNYDLRG
Sbjct: 361 GIGQIGRIKQKRGYKDQWPWNIKIYTDEMGNNKGDACVSYEDPSAAHSAGGFYNNYDLRG 420

Query: 421 YNINVAMAEKSAPRAPPTYNHGGGGRGGYGGGGDRRRDSYRDGGSGPDRHQHGGNRSRPY 480
           Y+INVAMAEKSAPRAPPTYNHGGGGRGGYGGGGDRRRDSYRDGGSGPDRHQHGGNRSRPY
Sbjct: 421 YSINVAMAEKSAPRAPPTYNHGGGGRGGYGGGGDRRRDSYRDGGSGPDRHQHGGNRSRPY 457

[Close]

BLAST of HG10021773 vs. ExPASy Swiss-Prot
Match: Q94KD0 (Transcription initiation factor TFIID subunit 15b OS=Arabidopsis thaliana OX=3702 GN=TAF15B PE=1 SV=1)

HSP 1 Score: 354.0 bits (907), Expect = 2.7e-96
Identity = 285/490 (58.16%), Postives = 322/490 (65.71%), Query Frame = 0


Query: 1   MSGMYDQ---GGDAAPSYGAPGGGGGYGGGGGGYGGGGGTGYGGKGGDGGYGGGGRGGGG 60
           M+GMY+Q   GG   PSY           GG GYGGGGG G    GGD GYGG G  GGG
Sbjct: 1   MAGMYNQDGGGGAPIPSY-----------GGDGYGGGGGYG----GGDAGYGGRGASGGG 60

Query: 61  GGRGYGGRGGGGGGGGGYGGRGGGGGYQGGDRGGRGAGRGGGGGRGGSGRDGDWVCPNPG 120
               YGGRGG GGGGG     GGGGGYQGGDRGGRG+        GG GRDGDW CPNP 
Sbjct: 61  ---SYGGRGGYGGGGGRGNRGGGGGGYQGGDRGGRGS--------GGGGRDGDWRCPNPS 120

Query: 121 CGNLNFARRVECNKCGAPSPGGASDRSGG-GGGGYNRGGADGGYSGNRNGRGGSFHGGRS 180
           CGN+NFARRVECNKCGA +P G S  +   GGGGY+RGG D    G R GR  S   GRS
Sbjct: 121 CGNVNFARRVECNKCGALAPSGTSSGANDRGGGGYSRGGGDSDRGGGRGGRNDS---GRS 180

Query: 181 GTHDGGRSEGGNRGGNSYGGHQGGEDSGYSQV-PPSSAPSSGVLAGSYPPSYHAGSADYG 240
             ++  R +GG+R G SYG     E+  Y Q  PP++A  S   +GSYPP        YG
Sbjct: 181 --YESSRYDGGSRSGGSYGSGSQRENGSYGQAPPPAAAIPSYDGSGSYPP-----PTGYG 240

Query: 241 TDAVPPPASYSGTTYPPNYGGPTGGYGGDNLGDGRGTAGRGGPSAGYDGGYNAGGRGGYN 300
            +AVPPP SYSG   PP+YGGP GGYG     D   T GRGG S GYDGG         +
Sbjct: 241 MEAVPPPTSYSGG--PPSYGGPRGGYG----SDAPSTGGRGGRSGGYDGG---------S 300

Query: 301 AGGRGGGSYNASGGRGGGYGSTPAAEPAQVKQCDDNCDDSCDNSRIYVSNLPPDVTIDEL 360
           A  R   SY               A   +VKQCD +CDD+CDN+RIY+SNLPPDVT DEL
Sbjct: 301 APRRQEASYE-------------DAATEKVKQCDADCDDNCDNARIYISNLPPDVTTDEL 360

Query: 361 RELFGGIGQIGRIKQKRGYKDQWPWNIKIYTDEMGNNKGDACVSYEDPSAAHSAGGFYNN 420
           ++LFGGIGQ+GRIKQKRGYKDQWP+NIKIYTDE GN KGDAC++YEDPSAAHSAGGF+NN
Sbjct: 361 KDLFGGIGQVGRIKQKRGYKDQWPYNIKIYTDEKGNYKGDACLAYEDPSAAHSAGGFFNN 420

Query: 421 YDLRGYNINVAMAEKSAPRAPPTYNHGGGGRGG-----YGGGGDRRRDSYRDGGSGPDRH 480
           Y++RG  I+V MAEKSAPRA PT++  GGGRGG      GGGGDRRRD+Y    SGPDR+
Sbjct: 421 YEMRGNKISVTMAEKSAPRA-PTFDQRGGGRGGGGGGYGGGGGDRRRDNY---SSGPDRN 422

[Close]

BLAST of HG10021773 vs. ExPASy TrEMBL
Match: A0A1S3C4S9 (transcription initiation factor TFIID subunit 15b isoform X1 OS=Cucumis melo OX=3656 GN=LOC103497038 PE=4 SV=1)

HSP 1 Score: 776.9 bits (2005), Expect = 4.8e-221
Identity = 459/491 (93.48%), Postives = 464/491 (94.50%), Query Frame = 0


Query: 1   MSGMYDQGGDAAPSYGAPGGGGGYGGGGGG---YGGGGGTGYGGKGGDGGYGGGGR-GGG 60
           MSGMYDQGGDAAPSYGAPGGGGGYGGGGGG    GGGGG GYGGKGGDGGYGGGGR GGG
Sbjct: 1   MSGMYDQGGDAAPSYGAPGGGGGYGGGGGGGGYGGGGGGAGYGGKGGDGGYGGGGRGGGG 60

Query: 61  GGGRGYGGRGGGGGGG-GGYGGRGG------GGGYQGGDRGGRGAGRGGGGGRGGSGRDG 120
           GGGRGYGGRGGGGGGG GG GG GG      GGGYQGGDRGGRGAGRGGGGGRGGSGRDG
Sbjct: 61  GGGRGYGGRGGGGGGGYGGRGGGGGYQGGDRGGGYQGGDRGGRGAGRGGGGGRGGSGRDG 120

Query: 121 DWVCPNPGCGNLNFARRVECNKCGAPSPGGASDRSGGGGGGYNRGGADGGYSGNRNGRGG 180
           DWVCPNPGCGNLNFARRVECNKCGAPSPGGASDR GGGGGGYNRGG D GY G+RNGRGG
Sbjct: 121 DWVCPNPGCGNLNFARRVECNKCGAPSPGGASDRGGGGGGGYNRGGGDSGYGGSRNGRGG 180

Query: 181 SFHGGRSGTHDGGRSEGGNRGGNSYGGHQGGEDSGYSQVPPSSAPSSGVLAGSYPPSYHA 240
           SFHGGRSGTHDGGR+EGG+RGGNSYGGHQGGEDSGY QVPPSSAPSSG LAGSYPPSYH 
Sbjct: 181 SFHGGRSGTHDGGRNEGGSRGGNSYGGHQGGEDSGYGQVPPSSAPSSGGLAGSYPPSYHG 240

Query: 241 GSADYGTDAVPPPASYSGTTYPPNYGGPTGGYGGDNLGDGRGTAGRGGPSAGYDGGYNAG 300
           GSADYGTDAVPPPASYSGTTYPP YGGPTGGYGGD+LGDGRG AGRGGPS GYDGGYNAG
Sbjct: 241 GSADYGTDAVPPPASYSGTTYPPTYGGPTGGYGGDSLGDGRGAAGRGGPSGGYDGGYNAG 300

Query: 301 GRGGYNAGGRGGGSYNASGGRGGGYGSTPAAEPAQVKQCDDNCDDSCDNSRIYVSNLPPD 360
           GRGGYNAGGR GGSYNASGGRGGGYGST AAEPAQVKQCDDNCDDSCDNSRIYVSNLPPD
Sbjct: 301 GRGGYNAGGR-GGSYNASGGRGGGYGSTQAAEPAQVKQCDDNCDDSCDNSRIYVSNLPPD 360

Query: 361 VTIDELRELFGGIGQIGRIKQKRGYKDQWPWNIKIYTDEMGNNKGDACVSYEDPSAAHSA 420
           VTIDELRELFGGIGQIGRIKQKRGYKDQWPWNIKIYTDEMGNNKGDACVSYEDPSAAHSA
Sbjct: 361 VTIDELRELFGGIGQIGRIKQKRGYKDQWPWNIKIYTDEMGNNKGDACVSYEDPSAAHSA 420

Query: 421 GGFYNNYDLRGYNINVAMAEKSAPRAPPTYNHGGGGRGGYGGGGDRRRDSYRDGGSGPDR 480
           GGFYNNYDLRGY+INVAMAEKSAPRAPPTYNHGGGGRGGYGGGGDRRRDSYRDGGSGPDR
Sbjct: 421 GGFYNNYDLRGYSINVAMAEKSAPRAPPTYNHGGGGRGGYGGGGDRRRDSYRDGGSGPDR 480

[Close]

BLAST of HG10021773 vs. ExPASy TrEMBL
Match: A0A0A0LYC4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G533590 PE=4 SV=1)

HSP 1 Score: 771.5 bits (1991), Expect = 2.0e-219
Identity = 456/492 (92.68%), Postives = 462/492 (93.90%), Query Frame = 0


Query: 1   MSGMYDQGGDAAPSYGAPGGGGGY--GGGGGGYGGGGGTGYGGKGGDGGYGGGGR---GG 60
           MSGMYDQGGDAAPSYGAPGGGGGY  GGGGGGYGGGGG GYGGKGGDGGYGGGGR   GG
Sbjct: 1   MSGMYDQGGDAAPSYGAPGGGGGYGGGGGGGGYGGGGGAGYGGKGGDGGYGGGGRGGGGG 60

Query: 61  GGGGRGYGGRGGGG-----GGGGGYGGRGGGGGYQGGDRGGRGAGRGGGGGRGGSGRDGD 120
           GGGGRGYGGRGGGG     GGGGGY G   GGGYQGGDRGGRGAGRGGGGGRGGSGRDGD
Sbjct: 61  GGGGRGYGGRGGGGGYGGRGGGGGYQGGDRGGGYQGGDRGGRGAGRGGGGGRGGSGRDGD 120

Query: 121 WVCPNPGCGNLNFARRVECNKCGAPSPGGASDRS--GGGGGGYNRGGADGGYSGNRNGRG 180
           WVCPNPGCGNLNFARRVECNKCGAPSPGGASDRS  GGGGGGYNRGG D GY G+RNGRG
Sbjct: 121 WVCPNPGCGNLNFARRVECNKCGAPSPGGASDRSGGGGGGGGYNRGGGDSGYGGSRNGRG 180

Query: 181 GSFHGGRSGTHDGGRSEGGNRGGNSYGGHQGGEDSGYSQVPPSSAPSSGVLAGSYPPSYH 240
           GSFHGGRSGTHDGGR+EGG+RGGNSYGGHQGGEDSGY QVPPSSAPSSG LAGSYPPSYH
Sbjct: 181 GSFHGGRSGTHDGGRNEGGSRGGNSYGGHQGGEDSGYGQVPPSSAPSSGGLAGSYPPSYH 240

Query: 241 AGSADYGTDAVPPPASYSGTTYPPNYGGPTGGYGGDNLGDGRGTAGRGGPSAGYDGGYNA 300
            GS+DYGTDAVPPPASYSGTTYPP YGGPTGGYGGD+LGDGRG A RGGPSAGYDGGYNA
Sbjct: 241 GGSSDYGTDAVPPPASYSGTTYPPTYGGPTGGYGGDSLGDGRGAAARGGPSAGYDGGYNA 300

Query: 301 GGRGGYNAGGRGGGSYNASGGRGGGYGSTPAAEPAQVKQCDDNCDDSCDNSRIYVSNLPP 360
           GGRGGYNAGGR GGSYNASGGR GGYGSTPAAEPAQVKQCDDNCDDSCDNSRIYVSNLPP
Sbjct: 301 GGRGGYNAGGR-GGSYNASGGRAGGYGSTPAAEPAQVKQCDDNCDDSCDNSRIYVSNLPP 360

Query: 361 DVTIDELRELFGGIGQIGRIKQKRGYKDQWPWNIKIYTDEMGNNKGDACVSYEDPSAAHS 420
           DVT DELRELFGGIGQIGRIKQKRGYKDQWPWNIKIYTDEMGNNKGDACVSYEDPSAAHS
Sbjct: 361 DVTTDELRELFGGIGQIGRIKQKRGYKDQWPWNIKIYTDEMGNNKGDACVSYEDPSAAHS 420

Query: 421 AGGFYNNYDLRGYNINVAMAEKSAPRAPPTYNHGGGGRGGYGGGGDRRRDSYRDGGSGPD 480
           AGGFYNNYDLRGY+INVAMAEKSAPRAPP YNHGGGGRGGYGGGGDRRRDSYRDGGSGPD
Sbjct: 421 AGGFYNNYDLRGYSINVAMAEKSAPRAPPAYNHGGGGRGGYGGGGDRRRDSYRDGGSGPD 480

[Close]

BLAST of HG10021773 vs. ExPASy TrEMBL
Match: A0A1S4E2C0 (transcription initiation factor TFIID subunit 15b isoform X2 OS=Cucumis melo OX=3656 GN=LOC103497038 PE=4 SV=1)

HSP 1 Score: 770.0 bits (1987), Expect = 5.8e-219
Identity = 439/483 (90.89%), Postives = 444/483 (91.93%), Query Frame = 0


Query: 1   MSGMYDQGGDAAPSYGAPGGGGGYGGGGGG---YGGGGGTGYGGKGGDGGYGGGGRGGGG 60
           MSGMYDQGGDAAPSYGAPGGGGGYGGGGGG    GGGGG GYGGKGGDGGYGGGGRGGG 
Sbjct: 1   MSGMYDQGGDAAPSYGAPGGGGGYGGGGGGGGYGGGGGGAGYGGKGGDGGYGGGGRGGG- 60

Query: 61  GGRGYGGRGGGGGGGGGYGGRGGGGGYQGGDRGGRGAGRGGGGGRGGSGRDGDWVCPNPG 120
                                GGGGGYQGGDRGGRGAGRGGGGGRGGSGRDGDWVCPNPG
Sbjct: 61  ---------------------GGGGGYQGGDRGGRGAGRGGGGGRGGSGRDGDWVCPNPG 120

Query: 121 CGNLNFARRVECNKCGAPSPGGASDRSGGGGGGYNRGGADGGYSGNRNGRGGSFHGGRSG 180
           CGNLNFARRVECNKCGAPSPGGASDR GGGGGGYNRGG D GY G+RNGRGGSFHGGRSG
Sbjct: 121 CGNLNFARRVECNKCGAPSPGGASDRGGGGGGGYNRGGGDSGYGGSRNGRGGSFHGGRSG 180

Query: 181 THDGGRSEGGNRGGNSYGGHQGGEDSGYSQVPPSSAPSSGVLAGSYPPSYHAGSADYGTD 240
           THDGGR+EGG+RGGNSYGGHQGGEDSGY QVPPSSAPSSG LAGSYPPSYH GSADYGTD
Sbjct: 181 THDGGRNEGGSRGGNSYGGHQGGEDSGYGQVPPSSAPSSGGLAGSYPPSYHGGSADYGTD 240

Query: 241 AVPPPASYSGTTYPPNYGGPTGGYGGDNLGDGRGTAGRGGPSAGYDGGYNAGGRGGYNAG 300
           AVPPPASYSGTTYPP YGGPTGGYGGD+LGDGRG AGRGGPS GYDGGYNAGGRGGYNAG
Sbjct: 241 AVPPPASYSGTTYPPTYGGPTGGYGGDSLGDGRGAAGRGGPSGGYDGGYNAGGRGGYNAG 300

Query: 301 GRGGGSYNASGGRGGGYGSTPAAEPAQVKQCDDNCDDSCDNSRIYVSNLPPDVTIDELRE 360
           GR GGSYNASGGRGGGYGST AAEPAQVKQCDDNCDDSCDNSRIYVSNLPPDVTIDELRE
Sbjct: 301 GR-GGSYNASGGRGGGYGSTQAAEPAQVKQCDDNCDDSCDNSRIYVSNLPPDVTIDELRE 360

Query: 361 LFGGIGQIGRIKQKRGYKDQWPWNIKIYTDEMGNNKGDACVSYEDPSAAHSAGGFYNNYD 420
           LFGGIGQIGRIKQKRGYKDQWPWNIKIYTDEMGNNKGDACVSYEDPSAAHSAGGFYNNYD
Sbjct: 361 LFGGIGQIGRIKQKRGYKDQWPWNIKIYTDEMGNNKGDACVSYEDPSAAHSAGGFYNNYD 420

Query: 421 LRGYNINVAMAEKSAPRAPPTYNHGGGGRGGYGGGGDRRRDSYRDGGSGPDRHQHGGNRS 480
           LRGY+INVAMAEKSAPRAPPTYNHGGGGRGGYGGGGDRRRDSYRDGGSGPDRHQHGGNRS
Sbjct: 421 LRGYSINVAMAEKSAPRAPPTYNHGGGGRGGYGGGGDRRRDSYRDGGSGPDRHQHGGNRS 460

[Close]

BLAST of HG10021773 vs. ExPASy TrEMBL
Match: A0A1S4E1L8 (transcription initiation factor TFIID subunit 15b isoform X3 OS=Cucumis melo OX=3656 GN=LOC103497038 PE=4 SV=1)

HSP 1 Score: 756.9 bits (1953), Expect = 5.1e-215
Identity = 436/480 (90.83%), Postives = 442/480 (92.08%), Query Frame = 0


Query: 1   MSGMYDQGGDAAPSYGAPGGGGGYGGGGGGYGGGGGTGYGGKGGDGGYGGGGRGGGGGGR 60
           MSGMYDQGGDAAPSYGAPGGGGGYGGGG                    GGGG GGGGGG 
Sbjct: 1   MSGMYDQGGDAAPSYGAPGGGGGYGGGG--------------------GGGGYGGGGGGA 60

Query: 61  GYGGRGGGGGGGGGYGGRGGGGGYQGGDRGGRGAGRGGGGGRGGSGRDGDWVCPNPGCGN 120
           GYGG+GG GG GG  GGRGGGGGYQGGDRGGRGAGRGGGGGRGGSGRDGDWVCPNPGCGN
Sbjct: 61  GYGGKGGDGGYGG--GGRGGGGGYQGGDRGGRGAGRGGGGGRGGSGRDGDWVCPNPGCGN 120

Query: 121 LNFARRVECNKCGAPSPGGASDRSGGGGGGYNRGGADGGYSGNRNGRGGSFHGGRSGTHD 180
           LNFARRVECNKCGAPSPGGASDR GGGGGGYNRGG D GY G+RNGRGGSFHGGRSGTHD
Sbjct: 121 LNFARRVECNKCGAPSPGGASDRGGGGGGGYNRGGGDSGYGGSRNGRGGSFHGGRSGTHD 180

Query: 181 GGRSEGGNRGGNSYGGHQGGEDSGYSQVPPSSAPSSGVLAGSYPPSYHAGSADYGTDAVP 240
           GGR+EGG+RGGNSYGGHQGGEDSGY QVPPSSAPSSG LAGSYPPSYH GSADYGTDAVP
Sbjct: 181 GGRNEGGSRGGNSYGGHQGGEDSGYGQVPPSSAPSSGGLAGSYPPSYHGGSADYGTDAVP 240

Query: 241 PPASYSGTTYPPNYGGPTGGYGGDNLGDGRGTAGRGGPSAGYDGGYNAGGRGGYNAGGRG 300
           PPASYSGTTYPP YGGPTGGYGGD+LGDGRG AGRGGPS GYDGGYNAGGRGGYNAGGR 
Sbjct: 241 PPASYSGTTYPPTYGGPTGGYGGDSLGDGRGAAGRGGPSGGYDGGYNAGGRGGYNAGGR- 300

Query: 301 GGSYNASGGRGGGYGSTPAAEPAQVKQCDDNCDDSCDNSRIYVSNLPPDVTIDELRELFG 360
           GGSYNASGGRGGGYGST AAEPAQVKQCDDNCDDSCDNSRIYVSNLPPDVTIDELRELFG
Sbjct: 301 GGSYNASGGRGGGYGSTQAAEPAQVKQCDDNCDDSCDNSRIYVSNLPPDVTIDELRELFG 360

Query: 361 GIGQIGRIKQKRGYKDQWPWNIKIYTDEMGNNKGDACVSYEDPSAAHSAGGFYNNYDLRG 420
           GIGQIGRIKQKRGYKDQWPWNIKIYTDEMGNNKGDACVSYEDPSAAHSAGGFYNNYDLRG
Sbjct: 361 GIGQIGRIKQKRGYKDQWPWNIKIYTDEMGNNKGDACVSYEDPSAAHSAGGFYNNYDLRG 420

Query: 421 YNINVAMAEKSAPRAPPTYNHGGGGRGGYGGGGDRRRDSYRDGGSGPDRHQHGGNRSRPY 480
           Y+INVAMAEKSAPRAPPTYNHGGGGRGGYGGGGDRRRDSYRDGGSGPDRHQHGGNRSRPY
Sbjct: 421 YSINVAMAEKSAPRAPPTYNHGGGGRGGYGGGGDRRRDSYRDGGSGPDRHQHGGNRSRPY 457

[Close]

BLAST of HG10021773 vs. ExPASy TrEMBL
Match: A0A6J1HM15 (transcription initiation factor TFIID subunit 15b-like OS=Cucurbita moschata OX=3662 GN=LOC111464812 PE=4 SV=1)

HSP 1 Score: 756.1 bits (1951), Expect = 8.7e-215
Identity = 445/503 (88.47%), Postives = 452/503 (89.86%), Query Frame = 0


Query: 1   MSGMYDQGGDAA-PSYGAPGGGGGYGGGGGGYGGGGGTGYGGKGGDGGYGGGGRGGGGGG 60
           MSGMYDQGGDAA PSYGAPGGGGGYGGG          GYGGKGGDGGYGGGGR GGGGG
Sbjct: 1   MSGMYDQGGDAAPPSYGAPGGGGGYGGG----------GYGGKGGDGGYGGGGR-GGGGG 60

Query: 61  RGYGGRGGGGGGGGGYGGRG--GGGGYQGGDRGGRGAGRGGGGGRGGSGRDGDWVCPNPG 120
           RGYGGR  GGGGGGGYGGRG  GGGGYQGGDRGGRG+GRGGGGGRGGSGRDGDWVCPNPG
Sbjct: 61  RGYGGR--GGGGGGGYGGRGGSGGGGYQGGDRGGRGSGRGGGGGRGGSGRDGDWVCPNPG 120

Query: 121 CGNLNFARRVECNKCGAPSPGGASDRSGGGG--------------------GGYNRGGAD 180
           CGNLNFARRVECNKCGAPSPGGAS   GGGG                    GGYNRGG D
Sbjct: 121 CGNLNFARRVECNKCGAPSPGGASGGGGGGGGGGGFNRGGADGGYNRGGGDGGYNRGGGD 180

Query: 181 GGYSGNRNGRGGSFHGGRSGTHDGGRSEGGNRGGNSYGGHQGGEDSGYSQVPPSSAPSSG 240
           GGY GNRNGRGGSFHGGRSGTHDGGR+EGGNRGGNSYGGHQGGEDSGYSQVPPSSAPSSG
Sbjct: 181 GGYGGNRNGRGGSFHGGRSGTHDGGRNEGGNRGGNSYGGHQGGEDSGYSQVPPSSAPSSG 240

Query: 241 VLAGSYPPSYHAGSADYGTDAVPPPASYSGTTYPPNYGGPTGGYGGDNLGDGRGTAGRGG 300
            LAGSYPPSYH GSADYGTDAVPPPASYSGTTYPP YGGP+GGY GD+LGDGR +AGRGG
Sbjct: 241 GLAGSYPPSYHGGSADYGTDAVPPPASYSGTTYPPTYGGPSGGYSGDSLGDGRSSAGRGG 300

Query: 301 PSAGYDGGYNAGGRGGYNAGGRGGGSYNASGGRGGGYGSTPAAEPAQVKQCDDNCDDSCD 360
           PSAGYDGGYNAGGRGGYN+GGRGGGSYN  GGRGGGYGSTPAAEPAQVKQCDDNCDDSCD
Sbjct: 301 PSAGYDGGYNAGGRGGYNSGGRGGGSYNTGGGRGGGYGSTPAAEPAQVKQCDDNCDDSCD 360

Query: 361 NSRIYVSNLPPDVTIDELRELFGGIGQIGRIKQKRGYKDQWPWNIKIYTDEMGNNKGDAC 420
           NSRIYVSNLP DVTIDELRELFGGIGQIGRIKQKRGYKDQWPWNIKIYTDEMGNNKGDAC
Sbjct: 361 NSRIYVSNLPTDVTIDELRELFGGIGQIGRIKQKRGYKDQWPWNIKIYTDEMGNNKGDAC 420

Query: 421 VSYEDPSAAHSAGGFYNNYDLRGYNINVAMAEKSAPRAPPTYNHGGGGRGGYGGGGDRRR 480
           VSYEDP AAHSAGGFYNNYDLRGYNI+VAMAEKSAPRAPPTYNHGGGGRGGYGGGGDRRR
Sbjct: 421 VSYEDPQAAHSAGGFYNNYDLRGYNISVAMAEKSAPRAPPTYNHGGGGRGGYGGGGDRRR 480

[Close]

BLAST of HG10021773 vs. TAIR 10
Match: AT5G58470.1 (TBP-associated factor 15B )

HSP 1 Score: 354.0 bits (907), Expect = 1.9e-97
Identity = 285/490 (58.16%), Postives = 322/490 (65.71%), Query Frame = 0


Query: 1   MSGMYDQ---GGDAAPSYGAPGGGGGYGGGGGGYGGGGGTGYGGKGGDGGYGGGGRGGGG 60
           M+GMY+Q   GG   PSY           GG GYGGGGG G    GGD GYGG G  GGG
Sbjct: 1   MAGMYNQDGGGGAPIPSY-----------GGDGYGGGGGYG----GGDAGYGGRGASGGG 60

Query: 61  GGRGYGGRGGGGGGGGGYGGRGGGGGYQGGDRGGRGAGRGGGGGRGGSGRDGDWVCPNPG 120
               YGGRGG GGGGG     GGGGGYQGGDRGGRG+        GG GRDGDW CPNP 
Sbjct: 61  ---SYGGRGGYGGGGGRGNRGGGGGGYQGGDRGGRGS--------GGGGRDGDWRCPNPS 120

Query: 121 CGNLNFARRVECNKCGAPSPGGASDRSGG-GGGGYNRGGADGGYSGNRNGRGGSFHGGRS 180
           CGN+NFARRVECNKCGA +P G S  +   GGGGY+RGG D    G R GR  S   GRS
Sbjct: 121 CGNVNFARRVECNKCGALAPSGTSSGANDRGGGGYSRGGGDSDRGGGRGGRNDS---GRS 180

Query: 181 GTHDGGRSEGGNRGGNSYGGHQGGEDSGYSQV-PPSSAPSSGVLAGSYPPSYHAGSADYG 240
             ++  R +GG+R G SYG     E+  Y Q  PP++A  S   +GSYPP        YG
Sbjct: 181 --YESSRYDGGSRSGGSYGSGSQRENGSYGQAPPPAAAIPSYDGSGSYPP-----PTGYG 240

Query: 241 TDAVPPPASYSGTTYPPNYGGPTGGYGGDNLGDGRGTAGRGGPSAGYDGGYNAGGRGGYN 300
            +AVPPP SYSG   PP+YGGP GGYG     D   T GRGG S GYDGG         +
Sbjct: 241 MEAVPPPTSYSGG--PPSYGGPRGGYG----SDAPSTGGRGGRSGGYDGG---------S 300

Query: 301 AGGRGGGSYNASGGRGGGYGSTPAAEPAQVKQCDDNCDDSCDNSRIYVSNLPPDVTIDEL 360
           A  R   SY               A   +VKQCD +CDD+CDN+RIY+SNLPPDVT DEL
Sbjct: 301 APRRQEASYE-------------DAATEKVKQCDADCDDNCDNARIYISNLPPDVTTDEL 360

Query: 361 RELFGGIGQIGRIKQKRGYKDQWPWNIKIYTDEMGNNKGDACVSYEDPSAAHSAGGFYNN 420
           ++LFGGIGQ+GRIKQKRGYKDQWP+NIKIYTDE GN KGDAC++YEDPSAAHSAGGF+NN
Sbjct: 361 KDLFGGIGQVGRIKQKRGYKDQWPYNIKIYTDEKGNYKGDACLAYEDPSAAHSAGGFFNN 420

Query: 421 YDLRGYNINVAMAEKSAPRAPPTYNHGGGGRGG-----YGGGGDRRRDSYRDGGSGPDRH 480
           Y++RG  I+V MAEKSAPRA PT++  GGGRGG      GGGGDRRRD+Y    SGPDR+
Sbjct: 421 YEMRGNKISVTMAEKSAPRA-PTFDQRGGGRGGGGGGYGGGGGDRRRDNY---SSGPDRN 422

[Close]

BLAST of HG10021773 vs. TAIR 10
Match: AT5G58470.2 (TBP-associated factor 15B )

HSP 1 Score: 354.0 bits (907), Expect = 1.9e-97
Identity = 285/490 (58.16%), Postives = 322/490 (65.71%), Query Frame = 0


Query: 1   MSGMYDQ---GGDAAPSYGAPGGGGGYGGGGGGYGGGGGTGYGGKGGDGGYGGGGRGGGG 60
           M+GMY+Q   GG   PSY           GG GYGGGGG G    GGD GYGG G  GGG
Sbjct: 1   MAGMYNQDGGGGAPIPSY-----------GGDGYGGGGGYG----GGDAGYGGRGASGGG 60

Query: 61  GGRGYGGRGGGGGGGGGYGGRGGGGGYQGGDRGGRGAGRGGGGGRGGSGRDGDWVCPNPG 120
               YGGRGG GGGGG     GGGGGYQGGDRGGRG+        GG GRDGDW CPNP 
Sbjct: 61  ---SYGGRGGYGGGGGRGNRGGGGGGYQGGDRGGRGS--------GGGGRDGDWRCPNPS 120

Query: 121 CGNLNFARRVECNKCGAPSPGGASDRSGG-GGGGYNRGGADGGYSGNRNGRGGSFHGGRS 180
           CGN+NFARRVECNKCGA +P G S  +   GGGGY+RGG D    G R GR  S   GRS
Sbjct: 121 CGNVNFARRVECNKCGALAPSGTSSGANDRGGGGYSRGGGDSDRGGGRGGRNDS---GRS 180

Query: 181 GTHDGGRSEGGNRGGNSYGGHQGGEDSGYSQV-PPSSAPSSGVLAGSYPPSYHAGSADYG 240
             ++  R +GG+R G SYG     E+  Y Q  PP++A  S   +GSYPP        YG
Sbjct: 181 --YESSRYDGGSRSGGSYGSGSQRENGSYGQAPPPAAAIPSYDGSGSYPP-----PTGYG 240

Query: 241 TDAVPPPASYSGTTYPPNYGGPTGGYGGDNLGDGRGTAGRGGPSAGYDGGYNAGGRGGYN 300
            +AVPPP SYSG   PP+YGGP GGYG     D   T GRGG S GYDGG         +
Sbjct: 241 MEAVPPPTSYSGG--PPSYGGPRGGYG----SDAPSTGGRGGRSGGYDGG---------S 300

Query: 301 AGGRGGGSYNASGGRGGGYGSTPAAEPAQVKQCDDNCDDSCDNSRIYVSNLPPDVTIDEL 360
           A  R   SY               A   +VKQCD +CDD+CDN+RIY+SNLPPDVT DEL
Sbjct: 301 APRRQEASYE-------------DAATEKVKQCDADCDDNCDNARIYISNLPPDVTTDEL 360

Query: 361 RELFGGIGQIGRIKQKRGYKDQWPWNIKIYTDEMGNNKGDACVSYEDPSAAHSAGGFYNN 420
           ++LFGGIGQ+GRIKQKRGYKDQWP+NIKIYTDE GN KGDAC++YEDPSAAHSAGGF+NN
Sbjct: 361 KDLFGGIGQVGRIKQKRGYKDQWPYNIKIYTDEKGNYKGDACLAYEDPSAAHSAGGFFNN 420

Query: 421 YDLRGYNINVAMAEKSAPRAPPTYNHGGGGRGG-----YGGGGDRRRDSYRDGGSGPDRH 480
           Y++RG  I+V MAEKSAPRA PT++  GGGRGG      GGGGDRRRD+Y    SGPDR+
Sbjct: 421 YEMRGNKISVTMAEKSAPRA-PTFDQRGGGRGGGGGGYGGGGGDRRRDNY---SSGPDRN 422

The following BLAST results are available for this feature:

BLAST of HG10021773 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008457317.1	9.8e-221	93.48	PREDICTED: transcription initiation factor TFIID subunit 15b isoform X1 [Cucumis...	[more]
XP_038894092.1	3.2e-219	93.80	transcription initiation factor TFIID subunit 15b [Benincasa hispida]	[more]
XP_011658817.1	4.1e-219	92.68	transcription initiation factor TFIID subunit 15b [Cucumis sativus]	[more]
XP_016902120.1	1.2e-218	90.89	PREDICTED: transcription initiation factor TFIID subunit 15b isoform X2 [Cucumis...	[more]
XP_016902121.1	1.1e-214	90.83	PREDICTED: transcription initiation factor TFIID subunit 15b isoform X3 [Cucumis...	[more]

BLAST of HG10021773 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94KD0	2.7e-96	58.16	Transcription initiation factor TFIID subunit 15b OS=Arabidopsis thaliana OX=370...	[more]

BLAST of HG10021773 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3C4S9	4.8e-221	93.48	transcription initiation factor TFIID subunit 15b isoform X1 OS=Cucumis melo OX=...	[more]
A0A0A0LYC4	2.0e-219	92.68	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G533590 PE=4 SV=1	[more]
A0A1S4E2C0	5.8e-219	90.89	transcription initiation factor TFIID subunit 15b isoform X2 OS=Cucumis melo OX=...	[more]
A0A1S4E1L8	5.1e-215	90.83	transcription initiation factor TFIID subunit 15b isoform X3 OS=Cucumis melo OX=...	[more]
A0A6J1HM15	8.7e-215	88.47	transcription initiation factor TFIID subunit 15b-like OS=Cucurbita moschata OX=...	[more]

BLAST of HG10021773 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G58470.1	1.9e-97	58.16	TBP-associated factor 15B	[more]
AT5G58470.2	1.9e-97	58.16	TBP-associated factor 15B	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 340..426 e-value: 4.1E-9 score: 46.3
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 341..370 e-value: 3.4E-6 score: 26.8
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 339..430 score: 13.992989
IPR001876	Zinc finger, RanBP2-type	SMART	SM00547	zf_4	coord: 109..135 e-value: 1.8E-7 score: 40.8
IPR001876	Zinc finger, RanBP2-type	PFAM	PF00641	zf-RanBP	coord: 107..138 e-value: 3.6E-8 score: 32.6
IPR001876	Zinc finger, RanBP2-type	PROSITE	PS01358	ZF_RANBP2_1	coord: 111..132
IPR001876	Zinc finger, RanBP2-type	PROSITE	PS50199	ZF_RANBP2_2	coord: 107..138 score: 10.150199
None	No IPR available	GENE3D	4.10.1060.10		coord: 105..139 e-value: 3.0E-15 score: 57.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 432..480
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 204..219
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 83..109
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 134..276
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 451..480
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 42..71
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..27
None	No IPR available	PANTHER	PTHR12999	ZINC FINGER RAN-BINDING DOMAIN-CONTAINING PROTEIN 2 ZRANB2-RELATED	coord: 2..480
None	No IPR available	PANTHER	PTHR12999:SF20	TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 15B	coord: 2..480
None	No IPR available	CDD	cd12280	RRM_FET	coord: 341..427 e-value: 3.11593E-36 score: 127.044
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 319..474 e-value: 3.2E-20 score: 74.6
IPR036443	Zinc finger, RanBP2-type superfamily	SUPERFAMILY	90209	Ran binding protein zinc finger-like	coord: 100..139
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 337..458

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10021773.1	HG10021773.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006413	translational initiation
molecular_function	GO:0020037	heme binding
molecular_function	GO:0005506	iron ion binding
molecular_function	GO:0004497	monooxygenase activity
molecular_function	GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
molecular_function	GO:0003743	translation initiation factor activity
molecular_function	GO:0003676	nucleic acid binding