Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. ATGCGAGGTTTTCATGTTCCTGACCTTGACACTAACTCTATGAGCTTTCAAGTTGATGGTCCCAGTCAGGCTTTGATTGAATCTGCTTTTGGTAGTCGGGTGCTGCAGTTATTGTTAAATGAGTCTCATGATCTTACTACCCGTCTGCAACAACTTCAAGATCAAAAGTCTCAAGTTGATGAGTTGTTATTAGTGATGAGGTCAATTCTATCTCGACCTGGTGGCAACTCTTCTTCTCAAAGAAGGGCTTGA mRNA sequence ATGCGAGGTTTTCATGTTCCTGACCTTGACACTAACTCTATGAGCTTTCAAGTTGATGGTCCCAGTCAGGCTTTGATTGAATCTGCTTTTGGTAGTCGGGTGCTGCAGTTATTGTTAAATGAGTCTCATGATCTTACTACCCGTCTGCAACAACTTCAAGATCAAAAGTCTCAAGTTGATGAGTTGTTATTAGTGATGAGGTCAATTCTATCTCGACCTGGTGGCAACTCTTCTTCTCAAAGAAGGGCTTGA Coding sequence (CDS) ATGCGAGGTTTTCATGTTCCTGACCTTGACACTAACTCTATGAGCTTTCAAGTTGATGGTCCCAGTCAGGCTTTGATTGAATCTGCTTTTGGTAGTCGGGTGCTGCAGTTATTGTTAAATGAGTCTCATGATCTTACTACCCGTCTGCAACAACTTCAAGATCAAAAGTCTCAAGTTGATGAGTTGTTATTAGTGATGAGGTCAATTCTATCTCGACCTGGTGGCAACTCTTCTTCTCAAAGAAGGGCTTGA Protein sequence MRGFHVPDLDTNSMSFQVDGPSQALIESAFGSRVLQLLLNESHDLTTRLQQLQDQKSQVDELLLVMRSILSRPGGNSSSQRRA
Homology
BLAST of HG10021660 vs. NCBI nr
Match: XP_038904458.1 (uncharacterized protein LOC120090822 [Benincasa hispida]) HSP 1 Score: 69.3 bits (168), Expect = 1.7e-08 Identity = 37/83 (44.58%), Postives = 61/83 (73.49%), Query Frame = 0 Query: 1 MRGFHVPDLDTNSMSFQVDGPSQALIESAFGSRVLQLLLNESHDLTTRLQQLQDQKSQVD 60 ++G +V DL+T ++++ +DG SQ ++ S+F +LQLL ESHDL + + QLQ++K++VD Sbjct: 200 LQGHYVLDLNTTTITYHLDGSSQ-IMASSFSGHILQLLSVESHDLESLVHQLQERKAEVD 259
Query: 61 ELLLVMRSILSRPGGNSSSQRRA 84 ++LL+M +LSR SSSQ R+ Sbjct: 260 KVLLIMWFVLSRDVEASSSQPRS 281
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_038904458.1 | 1.7e-08 | 44.58 | uncharacterized protein LOC120090822 [Benincasa hispida] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
None | No IPR available | COILS | Coil | Coil | coord: 35..55 |
Relationships
The following mRNA feature(s) are a part of this gene:
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