HG10021653 (gene) Bottle gourd (Hangzhou Gourd) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAACAAAAGCAACTTTTTATTCGGTATGGTGGTACATGGAATGTCAAAGAAGAATGCTACAAGGGAGGTTGTTTCAAGGGTATCATGGTACCGAGCACGCTGAATTATAGTCAACTAAGTGCTACATTATATGAACTTCCAAATGTCAGTTCTTTAGAGTTCAACATCGTAATGAGGGTCAAATACAAGGTGGATTATGAATGTCCTTTGGTTTGCATAATAGATGATGACGATGTTAGATTTATCCTCGAGGAAATTGATCGTAATAGACCTCCTGTATTCGTCAGTTTTGAGGAAACCAATCGAGATGGAACTTTTGAGGACACATTTACAGAACATGAACCCTTGTCTGCAATAGGTAACAATGATGAGTTATTTTTTTTTCCATCAATAGTCTCTATAGAAAATGACAGCTTGAACCCATGGACGGCTAACCAAAATTATTCAGGTCAGAAGCGGGGACGTAATAAAACCGTTGGTCTTACCTCACCCCACCCCATCCCACATCCTACTACAAGTGATGAGATAGGAGGTCCTCTTGTTGGTGGTGTTGATATTGTTGGGAGTACCTCATCCCAGCCAACTCCATGTCCAACTACTTCTACTGGAATAGTGGGTGGTCCTTCTGTTGGTGGTAGTACATCACTCCACCCCATCCTACATCCTACTACATGCATTGGAATTGGTGGTATTTCTGTGTTGAATGTACTCCAACAGAATTCGATTACTTAA ATGGAACAAAAGCAACTTTTTATTCGGTATGGTGGTACATGGAATGTCAAAGAAGAATGCTACAAGGGAGGTTGTTTCAAGGGTATCATGGTACCGAGCACGCTGAATTATAGTCAACTAAGTGCTACATTATATGAACTTCCAAATGTCAGTTCTTTAGAGTTCAACATCGTAATGAGGGTCAAATACAAGGTGGATTATGAATGTCCTTTGGTTTGCATAATAGATGATGACGATGTTAGATTTATCCTCGAGGAAATTGATCGTAATAGACCTCCTGTATTCGTCAGTTTTGAGGAAACCAATCGAGATGGAACTTTTGAGGACACATTTACAGAACATGAACCCTTGTCTGCAATAGGTAACAATGATGAGTTATTTTTTTTTCCATCAATAGTCTCTATAGAAAATGACAGCTTGAACCCATGGACGGCTAACCAAAATTATTCAGGTCAGAAGCGGGGACGTAATAAAACCGTTGGTCTTACCTCACCCCACCCCATCCCACATCCTACTACAAGTGATGAGATAGGAGGTCCTCTTGTTGGTGGTGTTGATATTGTTGGGAGTACCTCATCCCAGCCAACTCCATGTCCAACTACTTCTACTGGAATAGTGGGTGGTCCTTCTGTTGGTGGTAGTACATCACTCCACCCCATCCTACATCCTACTACATGCATTGGAATTGGTGGTATTTCTGTGTTGAATGTACTCCAACAGAATTCGATTACTTAA ATGGAACAAAAGCAACTTTTTATTCGGTATGGTGGTACATGGAATGTCAAAGAAGAATGCTACAAGGGAGGTTGTTTCAAGGGTATCATGGTACCGAGCACGCTGAATTATAGTCAACTAAGTGCTACATTATATGAACTTCCAAATGTCAGTTCTTTAGAGTTCAACATCGTAATGAGGGTCAAATACAAGGTGGATTATGAATGTCCTTTGGTTTGCATAATAGATGATGACGATGTTAGATTTATCCTCGAGGAAATTGATCGTAATAGACCTCCTGTATTCGTCAGTTTTGAGGAAACCAATCGAGATGGAACTTTTGAGGACACATTTACAGAACATGAACCCTTGTCTGCAATAGGTAACAATGATGAGTTATTTTTTTTTCCATCAATAGTCTCTATAGAAAATGACAGCTTGAACCCATGGACGGCTAACCAAAATTATTCAGGTCAGAAGCGGGGACGTAATAAAACCGTTGGTCTTACCTCACCCCACCCCATCCCACATCCTACTACAAGTGATGAGATAGGAGGTCCTCTTGTTGGTGGTGTTGATATTGTTGGGAGTACCTCATCCCAGCCAACTCCATGTCCAACTACTTCTACTGGAATAGTGGGTGGTCCTTCTGTTGGTGGTAGTACATCACTCCACCCCATCCTACATCCTACTACATGCATTGGAATTGGTGGTATTTCTGTGTTGAATGTACTCCAACAGAATTCGATTACTTAA MEQKQLFIRYGGTWNVKEECYKGGCFKGIMVPSTLNYSQLSATLYELPNVSSLEFNIVMRVKYKVDYECPLVCIIDDDDVRFILEEIDRNRPPVFVSFEETNRDGTFEDTFTEHEPLSAIGNNDELFFFPSIVSIENDSLNPWTANQNYSGQKRGRNKTVGLTSPHPIPHPTTSDEIGGPLVGGVDIVGSTSSQPTPCPTTSTGIVGGPSVGGSTSLHPILHPTTCIGIGGISVLNVLQQNSIT Homology
BLAST of HG10021653 vs. NCBI nr
Match: XP_038888098.1 (uncharacterized protein LOC120078004 [Benincasa hispida]) HSP 1 Score: 89.0 bits (219), Expect = 6.3e-14 Identity = 56/155 (36.13%), Postives = 84/155 (54.19%), Query Frame = 0
BLAST of HG10021653 vs. NCBI nr
Match: XP_038891939.1 (uncharacterized protein LOC120081277 isoform X2 [Benincasa hispida]) HSP 1 Score: 82.4 bits (202), Expect = 5.9e-12 Identity = 49/157 (31.21%), Postives = 81/157 (51.59%), Query Frame = 0
BLAST of HG10021653 vs. NCBI nr
Match: XP_038891938.1 (uncharacterized protein LOC120081277 isoform X1 [Benincasa hispida]) HSP 1 Score: 82.4 bits (202), Expect = 5.9e-12 Identity = 49/157 (31.21%), Postives = 81/157 (51.59%), Query Frame = 0
BLAST of HG10021653 vs. NCBI nr
Match: XP_022154925.1 (uncharacterized protein LOC111022071 [Momordica charantia]) HSP 1 Score: 81.6 bits (200), Expect = 1.0e-11 Identity = 39/94 (41.49%), Postives = 57/94 (60.64%), Query Frame = 0
BLAST of HG10021653 vs. NCBI nr
Match: XP_038902319.1 (trichohyalin-like [Benincasa hispida]) HSP 1 Score: 76.3 bits (186), Expect = 4.2e-10 Identity = 34/70 (48.57%), Postives = 47/70 (67.14%), Query Frame = 0
BLAST of HG10021653 vs. ExPASy TrEMBL
Match: A0A6J1DL08 (uncharacterized protein LOC111022071 OS=Momordica charantia OX=3673 GN=LOC111022071 PE=4 SV=1) HSP 1 Score: 81.6 bits (200), Expect = 4.8e-12 Identity = 39/94 (41.49%), Postives = 57/94 (60.64%), Query Frame = 0
BLAST of HG10021653 vs. ExPASy TrEMBL
Match: A0A2I7YUI4 (MuDRA-like transposase OS=Cucumis sativus OX=3659 PE=4 SV=1) HSP 1 Score: 72.8 bits (177), Expect = 2.3e-09 Identity = 35/101 (34.65%), Postives = 59/101 (58.42%), Query Frame = 0
BLAST of HG10021653 vs. ExPASy TrEMBL
Match: A0A6N0C346 (MURA transposase OS=Cucumis sativus OX=3659 PE=4 SV=1) HSP 1 Score: 72.8 bits (177), Expect = 2.3e-09 Identity = 35/101 (34.65%), Postives = 59/101 (58.42%), Query Frame = 0
BLAST of HG10021653 vs. ExPASy TrEMBL
Match: A0A6J1DPC2 (uncharacterized protein LOC111022579 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111022579 PE=4 SV=1) HSP 1 Score: 69.3 bits (168), Expect = 2.5e-08 Identity = 38/108 (35.19%), Postives = 58/108 (53.70%), Query Frame = 0
BLAST of HG10021653 vs. ExPASy TrEMBL
Match: A0A6J1DRN0 (uncharacterized protein LOC111022579 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111022579 PE=4 SV=1) HSP 1 Score: 69.3 bits (168), Expect = 2.5e-08 Identity = 38/108 (35.19%), Postives = 58/108 (53.70%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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