HG10021644 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10021644
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	Golgi apparatus membrane protein TVP23
Location	Chr05: 13046122 .. 13050702 (-)
RNA-Seq Expression	HG10021644
Synteny	HG10021644

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATGCCTCTTTTGCAGCCACCTGTGGAAAATTATGCTAACCCGAAGACTTGTTTCTTTCATGTTCTTTTTAAGGTAAGGTTATGTTACTATGATATGAATAGACTTCATTCTTGAATGATCTCTGGGCTTTCTGGGATTTATGTGATCGTGCTTCTTCTTTTCCAGGCTGGAGCATTGGTTTTTTACATTCTTTCCTCTCTCTTTTTCAATAGTTTTGTTATCATTTTTGTGGTGACTGTTTTTCTCGCTGCTCTCGACTTTTGGGTCGTGAAGAATGTGAGCGGGCGTATATTGGTTGGTTTAAGGTGGTGGAATGAAATAAATGATCTGGGTGAGAGTGTGTGGAAATTTGAAAGCCTTGATCAAGAGGTGAGTGTTTAGTTCTTACATTTTCAGAATTTGCTTCTTGTTTATGTTACCTGGATAACATTTAAATGCTTATTCTCACTTCTTATGCACATGATCCTTGGTTATTCTTTAGTCATTGTCTCGGATGAACAAAAAAGATTCCTGGCTGTTCTGGTGGACCTTGTACCTCACGGTAAGAAAGCATTATGATCCCAAATATTGTGATAATTTGATTATGTGTTTGCAATAATTTATCAAACAAGCTATATGATTTTGAGAAATAAATTTTATCATGCAGTTAAAAGAATGAATGTCAGCAGGTATGGTTCTTTAAAGATAATAATGATTTATTCATTGCAGTTAACATACATGTCTAAAGCTTAGTAAATCTGGAGGCAGGCCAGTCACTTTGATTTTATGTTTTCTTTTGTTGGTGGCAGGGTGGGGAAATTAAAGAAATAACTTTTTCCTGATTATTTGAGTGTTTTCAAGAAAAACCAAGTTTTAGTTATTTTTTTGTTTTTGGTTTTCCCTCAAAGTATGTTGTATATTTTAGTTATTATGTACTTAAAAACTGTCATTTCTTGCTAAACATGAACCATGGCCTTAAAAAGAAAAAGGAAAAACAAAACAAAACAAAGGAAAGGAAAATAGTTGGATTCAAAAGATTTAATATTTTAAGCCTTTTCTTTCTAGATAATAACTTGTAGAAGAAATTTGTTATTTAGAAAATAATTTTGTGTTTTGGAATTTACTTTTATTCAAAGAAGCAAATATAGTGGTTAAATCATAAATGATGTATGATCTTGAACTAAAAATTAGTCACACTTACCCTAAAACTGATAGATTCGAGTAAATGTTGTAGGGTCATCACCTTATAGGTCTCAAAAACGTATATGTTTTATGCCATGCAAGAGGTACTGCATTTCCATATTAAAGCTAATATATGGAAAAACTAAAAATTAAAAGGAAGGAAAAAAGGAAAAGCAAAGAGAGAGAGAGAGAGAAAGAAAGAAAAAATCAAGAATGGACTGTGCTTCGGTCATTATGGTTTTATGGCTAATCTAAATGGGCTTTCCTTTGGTCATTATGGTTAGAGAGGAACTCGCACATCTTCACAGACAAAGATCGGTGTTTTGTTTCCATTATTTTTCTGGCTTTTCAATGGTTTAAATTGTCCTGTTTGTAGTTTCATCAGTCTTATTACCCATTGGAAAGGTTTTTTTTTTTTTTTTTTTTTTTTTCACGCCTCTAAAACCTCTTGATAGTTTCTCTACTCAAGAGTGGATGTATTTTATTTTCTAGTTTCATTTAATCGATGAAATGTTCTTTTTCTTACAAATATATAAAAACTTGTGATCTTCAATATCCATGTATGCTCATGCTTCTGAACCTGAATAACAGGCAGTTGCATGGACTGTGCTGGGCATATTCTCGTTGATAAAGTTTCAAGCTGATTATCTCCTTGTCGTAGGAGTTTGTTTGACTTTGAGCGTTGCGAACATTATTGGCTTTACAAAATGTCGTAAAGGTAAGCAATAAGTTCCTTGAGCTATGAAAATCCTATAGTGTTTGTACAAGCACTGAAAAGCCTGATTTGTTGTTGTTTTTTTGTTTTTTTTTTTAAAAAAAAATTTACGGAATCAAACTTTTCATTAAAATAATGAAATGAGTTTAGTGCTCAAAATACAAGAAATGAAACAAAAGGAAGCTTAAAAGAACAATAATATATTAAACCAAACTAGCATAGCTAAGAAGAAATAAATGCATTCCAATTTAAACTAATGTGTTGAATAGAGTAGTCAACAAATAATTTGGAAAGAGAGCACCATGAAGAAGCTTTGACTCAAGCAATCTCATAACAAGCAAACCAAGGAAGAGACTTGTCTTAAAATACTTGTAGGTTCCTTTCAAACCAAATTTCTAATAGAATTGCTTTAACTCCATTAACCCACAACAGATGAGAAAGAGCTTCTTCCACATTCTCCATACACAAAGGGAAAATCGAGAGCAGAAGTGAGTGGCTTAGTAGCTTTCTTTGAAGAGACTTTGAGCAATTAAGAGCTCCAAAAAACATAACTCAAATTACGATGTTAACTCTTCTTGGGCAACTTGATTTCCACAAAGGTTTGTACAGCTTTGAGTCCATGGGAGAGGAATCAGCCAAATGCGTGAACAAAGATTTAACAGAAAACTGACCTGAAGCTCCAACTTCCAACATCATGAATCTTGTCTTTCAACTACTTTTTTGGCCCTCTAAGACTGCCAATAAATTCTGAAAATCTAGCAGCTCTTCCTTCAAAAATCTTCTAAAAATAATTGACCATGACAGAGTATTCAAATCCCAATGATCAGAAATTTTTTTTGAACTTTAAGGGATAGACCATTGTGAAACCCTGCCTGCTGTTTGTTAATTTGTTCGGTGTCTTTATATTTCAATCATTGTTAGAAGATATTGAGTTTAGTAGGGACTTGATGCTTAAATCTTAACCTTGTAAAGGATACTTACTCTAGTCTTTGCATACCAGCACATGAGGATATGAATATCTCTGTTTTGTTTGTTATTTTGACCTTTATGCTTCTTGTGGACCATAGTAACTTGTAGTGTAGCCCTTAGACACACAGACATGCATATTGATACAAATAGCTCTTGTACATATGGTTAGAGCCTCATATCTCCAATGCATCAACTTCTTCAATGAAACCCCTTAACAGTTATATTTTCTACGAGGAAACATTACGAGTTGCATGGACAGAATGAAATATTTACAATGAGGTAAAACCACATTGAGGTTAAAGTGTGTGATCAAAGTACTCTGATGATCACGAAGAAATTTAGACAAGGAACTTTATGAGGAAGCCACAAGCATAGTAAAATCCTATAAATCCACCAAGAGATCTCCAAATCTAGAAGCTCCTTAATGCTTTTCGGCATCGCAGCTTCAAGCAGCTTGAAGTAAAAGAAAATACCAAAAGACGTCCACCCATGATTAAGGGCCTGTTTGGATTGACTTGAGAAAAAAATGTTTTTCAAAAAATTCATTTTTATTTAAACTCTTTTGATTAAAATTGTTTAAAATACACTTCAAAGGTTATATTGAGTGGTTGCCAAACACTTCAATTTTTTTTCAAAATGACTTATTTTTTAAATTAAACATTTGGAAATATATTCCAATACACCAACTCTTTCATTCATACTTTTGCTCATATTACACTGGGGTAAAGAATGTAAGTTATGCCTGTGTGCATTAGTAATGAGGTTTTTGTTTTTCTTTTTTTTTCCCATTGTCATCACCCTTTTTCTAACATTTTCAGGACATCCGCAATATGGCCTAATCTTTAGTTCAGCATCCCGCAGTCTCCCACTATAAAAATAGATAGAGGGAATTTAGATATAAAAATCAAATACCCATACTGTCGTGGATTCCTTTATATATATATATATATATTTGGTGAATGTGCCTCGGCATTGATATGGAACAACTTTCAAACGGTACAATATTTGGCATCAGGAAGTTCATAGGGTATTTTCTTAGACAAGTCATCACCATGATTTGGAGCCATCGTTCTCAAAGTTGGCCGAGCTAACAACTATTCCCTTACCAATTACAGGCTTATTACTTCTGCACATATTGTGATGCCAACTGATAAGTTATAACTGCCGGAAACCTACCTTCCTTCTAAAAGACTGATCAAGCTTGAAGATATTGCCATTAGGGCTCATGGTGTTACTAACAGTAGTCATTATATAATCTTTCTATGTTGACTCAAATTTTTGTTGTTCTCAAGCATTTTACTACTTTACCCTCCCCTTTCTTCTTTACATTATATTTCCAAGACTGATTAGGCTTGGAGAAGATATTCCCATGGTCTTTCTATGTCGACTCAAATTTTTGTAGTTCTTACGCATTTTACTACTTTACCCTTCCATTTCTTCTTTACATTTTACTTCTAAGACTGATTAGGTTTGGAGAAGATATTCCCGCGTTCAGTCTTGTAGTTCTTATGCATTTTACTACTTTACCCCCTCCCCTTTCTTTCCATTTTACTTCCAACACTGGTTAGGCTTGAAGAAGATATTTCCATGTACAGTCTTTCTATTTGTTGGCTGAAATTTTTGCAATTCTTGTACTACTTTCAGATGCCAAGAAGCAGTTTCAGCAATTTGCCACTCAGACCATTGCTTCTCAGTTCTCCTCTACATTACAATCAGCCTTCAGTGTTGTTTGA

mRNA sequence

ATGATGCCTCTTTTGCAGCCACCTGTGGAAAATTATGCTAACCCGAAGACTTGTTTCTTTCATGTTCTTTTTAAGGCTGGAGCATTGGTTTTTTACATTCTTTCCTCTCTCTTTTTCAATAGTTTTGTTATCATTTTTGTGGTGACTGTTTTTCTCGCTGCTCTCGACTTTTGGGTCGTGAAGAATGTGAGCGGGCGTATATTGGTTGGTTTAAGGTGGTGGAATGAAATAAATGATCTGGGTGAGAGTGTGTGGAAATTTGAAAGCCTTGATCAAGAGTCATTGTCTCGGATGAACAAAAAAGATTCCTGGCTGTTCTGGTGGACCTTGTACCTCACGGCAGTTGCATGGACTGTGCTGGGCATATTCTCGTTGATAAAGTTTCAAGCTGATTATCTCCTTGTCGTAGGAGTTTGTTTGACTTTGAGCGTTGCGAACATTATTGGCTTTACAAAATGTCGTAAAGATGCCAAGAAGCAGTTTCAGCAATTTGCCACTCAGACCATTGCTTCTCAGTTCTCCTCTACATTACAATCAGCCTTCAGTGTTGTTTGA

Coding sequence (CDS)

ATGATGCCTCTTTTGCAGCCACCTGTGGAAAATTATGCTAACCCGAAGACTTGTTTCTTTCATGTTCTTTTTAAGGCTGGAGCATTGGTTTTTTACATTCTTTCCTCTCTCTTTTTCAATAGTTTTGTTATCATTTTTGTGGTGACTGTTTTTCTCGCTGCTCTCGACTTTTGGGTCGTGAAGAATGTGAGCGGGCGTATATTGGTTGGTTTAAGGTGGTGGAATGAAATAAATGATCTGGGTGAGAGTGTGTGGAAATTTGAAAGCCTTGATCAAGAGTCATTGTCTCGGATGAACAAAAAAGATTCCTGGCTGTTCTGGTGGACCTTGTACCTCACGGCAGTTGCATGGACTGTGCTGGGCATATTCTCGTTGATAAAGTTTCAAGCTGATTATCTCCTTGTCGTAGGAGTTTGTTTGACTTTGAGCGTTGCGAACATTATTGGCTTTACAAAATGTCGTAAAGATGCCAAGAAGCAGTTTCAGCAATTTGCCACTCAGACCATTGCTTCTCAGTTCTCCTCTACATTACAATCAGCCTTCAGTGTTGTTTGA

Protein sequence

MMPLLQPPVENYANPKTCFFHVLFKAGALVFYILSSLFFNSFVIIFVVTVFLAALDFWVVKNVSGRILVGLRWWNEINDLGESVWKFESLDQESLSRMNKKDSWLFWWTLYLTAVAWTVLGIFSLIKFQADYLLVVGVCLTLSVANIIGFTKCRKDAKKQFQQFATQTIASQFSSTLQSAFSVV

Homology

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BLAST of HG10021644 vs. NCBI nr
Match: XP_016899529.1 (PREDICTED: Golgi apparatus membrane protein-like protein ECHIDNA isoform X1 [Cucumis melo])

HSP 1 Score: 355.9 bits (912), Expect = 2.1e-94
Identity = 181/184 (98.37%), Postives = 183/184 (99.46%), Query Frame = 0


Query: 1   MMPLLQPPVENYANPKTCFFHVLFKAGALVFYILSSLFFNSFVIIFVVTVFLAALDFWVV 60
           M+PLLQPPVENYANPKTCFFHVLFKAGAL FYILSSLFFNSFVIIFVVTVFLAALDFWVV
Sbjct: 1   MIPLLQPPVENYANPKTCFFHVLFKAGALAFYILSSLFFNSFVIIFVVTVFLAALDFWVV 60

Query: 61  KNVSGRILVGLRWWNEINDLGESVWKFESLDQESLSRMNKKDSWLFWWTLYLTAVAWTVL 120
           KNVSGRILVGLRWWNEINDLGESVWKFESLDQESLSRMNKKDSWLFWWTLYLTAVAWTVL
Sbjct: 61  KNVSGRILVGLRWWNEINDLGESVWKFESLDQESLSRMNKKDSWLFWWTLYLTAVAWTVL 120

Query: 121 GIFSLIKFQADYLLVVGVCLTLSVANIIGFTKCRKDAKKQFQQFATQTIASQFSSTLQSA 180
           GIFSLIKFQADYLLVVGVCLTLS+ANIIGFTKCRKDAKKQFQQFATQTIASQFSSTLQSA
Sbjct: 121 GIFSLIKFQADYLLVVGVCLTLSIANIIGFTKCRKDAKKQFQQFATQTIASQFSSTLQSA 180

Query: 181 FSVV 185
           FSVV
Sbjct: 181 FSVV 184

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BLAST of HG10021644 vs. NCBI nr
Match: XP_004151115.1 (Golgi apparatus membrane protein-like protein ECHIDNA [Cucumis sativus] >XP_008442125.1 PREDICTED: Golgi apparatus membrane protein-like protein ECHIDNA isoform X2 [Cucumis melo] >KGN54797.1 hypothetical protein Csa_012791 [Cucumis sativus] >TYK05480.1 Golgi apparatus membrane protein-like protein ECHIDNA isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 348.2 bits (892), Expect = 4.3e-92
Identity = 177/179 (98.88%), Postives = 178/179 (99.44%), Query Frame = 0


Query: 6   QPPVENYANPKTCFFHVLFKAGALVFYILSSLFFNSFVIIFVVTVFLAALDFWVVKNVSG 65
           QPPVENYANPKTCFFHVLFKAGAL FYILSSLFFNSFVIIFVVTVFLAALDFWVVKNVSG
Sbjct: 5   QPPVENYANPKTCFFHVLFKAGALAFYILSSLFFNSFVIIFVVTVFLAALDFWVVKNVSG 64

Query: 66  RILVGLRWWNEINDLGESVWKFESLDQESLSRMNKKDSWLFWWTLYLTAVAWTVLGIFSL 125
           RILVGLRWWNEINDLGESVWKFESLDQESLSRMNKKDSWLFWWTLYLTAVAWTVLGIFSL
Sbjct: 65  RILVGLRWWNEINDLGESVWKFESLDQESLSRMNKKDSWLFWWTLYLTAVAWTVLGIFSL 124

Query: 126 IKFQADYLLVVGVCLTLSVANIIGFTKCRKDAKKQFQQFATQTIASQFSSTLQSAFSVV 185
           IKFQADYLLVVGVCLTLS+ANIIGFTKCRKDAKKQFQQFATQTIASQFSSTLQSAFSVV
Sbjct: 125 IKFQADYLLVVGVCLTLSIANIIGFTKCRKDAKKQFQQFATQTIASQFSSTLQSAFSVV 183

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BLAST of HG10021644 vs. NCBI nr
Match: KAA0044244.1 (Golgi apparatus membrane protein-like protein ECHIDNA isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 346.3 bits (887), Expect = 1.6e-91
Identity = 176/178 (98.88%), Postives = 177/178 (99.44%), Query Frame = 0


Query: 7   PPVENYANPKTCFFHVLFKAGALVFYILSSLFFNSFVIIFVVTVFLAALDFWVVKNVSGR 66
           PPVENYANPKTCFFHVLFKAGAL FYILSSLFFNSFVIIFVVTVFLAALDFWVVKNVSGR
Sbjct: 88  PPVENYANPKTCFFHVLFKAGALAFYILSSLFFNSFVIIFVVTVFLAALDFWVVKNVSGR 147

Query: 67  ILVGLRWWNEINDLGESVWKFESLDQESLSRMNKKDSWLFWWTLYLTAVAWTVLGIFSLI 126
           ILVGLRWWNEINDLGESVWKFESLDQESLSRMNKKDSWLFWWTLYLTAVAWTVLGIFSLI
Sbjct: 148 ILVGLRWWNEINDLGESVWKFESLDQESLSRMNKKDSWLFWWTLYLTAVAWTVLGIFSLI 207

Query: 127 KFQADYLLVVGVCLTLSVANIIGFTKCRKDAKKQFQQFATQTIASQFSSTLQSAFSVV 185
           KFQADYLLVVGVCLTLS+ANIIGFTKCRKDAKKQFQQFATQTIASQFSSTLQSAFSVV
Sbjct: 208 KFQADYLLVVGVCLTLSIANIIGFTKCRKDAKKQFQQFATQTIASQFSSTLQSAFSVV 265

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BLAST of HG10021644 vs. NCBI nr
Match: XP_022961588.1 (Golgi apparatus membrane protein-like protein ECHIDNA isoform X1 [Cucurbita moschata])

HSP 1 Score: 345.5 bits (885), Expect = 2.8e-91
Identity = 174/182 (95.60%), Postives = 180/182 (98.90%), Query Frame = 0


Query: 2   MPLLQPPVENYANPKTCFFHVLFKAGALVFYILSSLFFNSFVIIFVVTVFLAALDFWVVK 61
           MPLLQPPVENYANPKTCFFHV FKAGAL FYILSSLFF+SFVIIFVVTVFLAALDFWVVK
Sbjct: 5   MPLLQPPVENYANPKTCFFHVFFKAGALAFYILSSLFFSSFVIIFVVTVFLAALDFWVVK 64

Query: 62  NVSGRILVGLRWWNEINDLGESVWKFESLDQESLSRMNKKDSWLFWWTLYLTAVAWTVLG 121
           N+SGRILVGLRWWNEI+D+GESVWKFESLDQESL+RMNKKDSWLFWWTLYLTAVAWTVLG
Sbjct: 65  NLSGRILVGLRWWNEIDDMGESVWKFESLDQESLARMNKKDSWLFWWTLYLTAVAWTVLG 124

Query: 122 IFSLIKFQADYLLVVGVCLTLSVANIIGFTKCRKDAKKQFQQFATQTIASQFSSTLQSAF 181
           IFSLIKFQADYLLVVGVCLTLS+ANIIGFTKCRKDAKKQFQQFATQTIASQFSSTLQSAF
Sbjct: 125 IFSLIKFQADYLLVVGVCLTLSIANIIGFTKCRKDAKKQFQQFATQTIASQFSSTLQSAF 184

Query: 182 SV 184
           SV
Sbjct: 185 SV 186

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BLAST of HG10021644 vs. NCBI nr
Match: XP_022159687.1 (Golgi apparatus membrane protein-like protein ECHIDNA [Momordica charantia])

HSP 1 Score: 344.7 bits (883), Expect = 4.8e-91
Identity = 176/179 (98.32%), Postives = 176/179 (98.32%), Query Frame = 0


Query: 6   QPPVENYANPKTCFFHVLFKAGALVFYILSSLFFNSFVIIFVVTVFLAALDFWVVKNVSG 65
           QPPVENYANPKTCFFHVLFKAGAL FYILSSLFFNSFVIIFVVTVFLAALDFWVVKNVSG
Sbjct: 5   QPPVENYANPKTCFFHVLFKAGALAFYILSSLFFNSFVIIFVVTVFLAALDFWVVKNVSG 64

Query: 66  RILVGLRWWNEINDLGESVWKFESLDQESLSRMNKKDSWLFWWTLYLTAVAWTVLGIFSL 125
           RILVGLRWWNEINDLGESVWKFESLDQESLSRMNKKDSWLFWWTLYLTA AWTVLGIFSL
Sbjct: 65  RILVGLRWWNEINDLGESVWKFESLDQESLSRMNKKDSWLFWWTLYLTAAAWTVLGIFSL 124

Query: 126 IKFQADYLLVVGVCLTLSVANIIGFTKCRKDAKKQFQQFATQTIASQFSSTLQSAFSVV 185
           IKFQADYLLVVGVCLTLSVANIIGFTKCRKDAKKQ QQFATQTIASQFSSTLQSAFSVV
Sbjct: 125 IKFQADYLLVVGVCLTLSVANIIGFTKCRKDAKKQLQQFATQTIASQFSSTLQSAFSVV 183

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BLAST of HG10021644 vs. ExPASy Swiss-Prot
Match: Q8LEK2 (Golgi apparatus membrane protein-like protein ECHIDNA OS=Arabidopsis thaliana OX=3702 GN=ECH PE=1 SV=1)

HSP 1 Score: 314.3 bits (804), Expect = 9.1e-85
Identity = 155/180 (86.11%), Postives = 170/180 (94.44%), Query Frame = 0


Query: 5   LQPPVENYANPKTCFFHVLFKAGALVFYILSSLFFNSFVIIFVVTVFLAALDFWVVKNVS 64
           +Q PVENYANP+TC FHVLFK  AL FYILS+LFFNSFVIIFVVTV LAALDFWVVKNVS
Sbjct: 7   IQAPVENYANPRTCLFHVLFKGAALAFYILSALFFNSFVIIFVVTVLLAALDFWVVKNVS 66

Query: 65  GRILVGLRWWNEINDLGESVWKFESLDQESLSRMNKKDSWLFWWTLYLTAVAWTVLGIFS 124
           GRILVGLRWWNEINDLGESVWKFESLDQESL+RMNKKDSWLFWWTLYL A AW +LG+FS
Sbjct: 67  GRILVGLRWWNEINDLGESVWKFESLDQESLARMNKKDSWLFWWTLYLAAAAWFILGVFS 126

Query: 125 LIKFQADYLLVVGVCLTLSVANIIGFTKCRKDAKKQFQQFATQTIASQFSSTLQSAFSVV 184
           LI+FQADYLLVVGVCL+L+VANIIGFTKC+KDAKKQFQQFA+QTIAS+F ST+QSAF++V
Sbjct: 127 LIRFQADYLLVVGVCLSLNVANIIGFTKCKKDAKKQFQQFASQTIASRFQSTVQSAFTLV 186

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BLAST of HG10021644 vs. ExPASy Swiss-Prot
Match: Q8IQC1 (Uncharacterized Golgi apparatus membrane protein-like protein CG5021 OS=Drosophila melanogaster OX=7227 GN=CG5021 PE=2 SV=2)

HSP 1 Score: 131.0 bits (328), Expect = 1.4e-29
Identity = 67/165 (40.61%), Postives = 98/165 (59.39%), Query Frame = 0


Query: 10  ENYANPKTCFFHVLFKAGALVFYILSSLFFNSFVIIFVVTVFLAALDFWVVKNVSGRILV 69
           + Y +P   FFH+ F+  A++ Y+    F +SF+  FV  V   + DFW VKN+SGR+LV
Sbjct: 33  QKYTHPYVTFFHLFFRGAAILIYMFCGWFSDSFITSFVFVVLFLSADFWTVKNISGRLLV 92

Query: 70  GLRWWNEINDLGESVWKFESLDQESL-SRMNKKDSWLFWWTLYLTAVAWTVLGIFSLIKF 129
           GLRWWN ++D G S W FES + ES  SR+NK +  +FW  L L  V W +  +F+L   
Sbjct: 93  GLRWWNYVDDDGVSHWVFESKNSESYQSRVNKNEQRIFWLGLILCPVFWGLFFLFALFGL 152

Query: 130 QADYLLVVGVCLTLSVANIIGFTKCRKDAKKQFQQFATQTIASQF 174
           +  +LL+V + + L+ AN+ G+ KC   A K     AT  + +QF
Sbjct: 153 KFKWLLLVMIAIALNAANLYGYVKCNYGANKDLNSAATDFVKTQF 197

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BLAST of HG10021644 vs. ExPASy Swiss-Prot
Match: Q9Y7K7 (Golgi apparatus membrane protein tvp23 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=tvp23 PE=3 SV=1)

HSP 1 Score: 123.6 bits (309), Expect = 2.3e-27
Identity = 70/167 (41.92%), Postives = 101/167 (60.48%), Query Frame = 0


Query: 13  ANPKTCFFHVLFKAGALVFYILSSLFFNSFVIIFVVTVFLAALDFWVVKNVSGRILVGLR 72
           ++P   FF +LF+ GA+V YIL   F +SF+++F+V   L A+D W VKNVSGR+LVGLR
Sbjct: 46  SHPVALFFFLLFRTGAIVAYILGMFFTSSFMLLFIVIFTLLAVDLWTVKNVSGRLLVGLR 105

Query: 73  WWNEINDLGESVWKFESLDQESLSRMNKKDSWLFWWTLYLTAVAWTVLGIFSLIKFQADY 132
           W NE    GES+W FES D       N  D   FW+ LYL    W +LGI ++I+F+  +
Sbjct: 106 WRNETGVDGESIWIFESADPS--RPRNAVDQKTFWYALYLYPFIWIILGIVAIIRFEFLW 165

Query: 133 LLVVGVCLTLSVANIIGFTKCRKDAKKQFQQFATQTIASQFSSTLQS 180
           L +V V + L+  N   +++C KDAK+++      + +S F S   S
Sbjct: 166 LALVAVAIGLTSVNTAAYSRCDKDAKRRWATELADSNSSGFVSRFLS 210

[Close]

BLAST of HG10021644 vs. ExPASy Swiss-Prot
Match: Q6C7V5 (Golgi apparatus membrane protein TVP23 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) OX=284591 GN=TVP23 PE=3 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 1.5e-26
Identity = 62/146 (42.47%), Postives = 94/146 (64.38%), Query Frame = 0


Query: 13  ANPKTCFFHVLFKAGALVFYILSSLFFNSFVIIFVVTVFLAALDFWVVKNVSGRILVGLR 72
           ++P    F + F+ GAL  Y+   LF + FV++FV+ V L A DFW VKN++GR++VGLR
Sbjct: 11  SHPVALVFFLAFRLGALFTYMFGLLFTDKFVLMFVLVVLLLAADFWNVKNIAGRLMVGLR 70

Query: 73  WWNEINDLGESVWKFESLDQESLSRMNKKDSWLFWWTLYLTAVAWTVLGIFSLIKFQADY 132
           WWNE ++ GESVW FE+ D +    +N  DS +FW  LY   V W  L + +L+KFQ   
Sbjct: 71  WWNEASETGESVWVFETADPQRY--INPIDSKVFWMMLYGAPVLWVCLAVLALLKFQFLS 130

Query: 133 LLVVGVCLTLSVANIIGFTKCRKDAK 159
           L++V + ++L+V N + +++C K  K
Sbjct: 131 LILVFIAVSLTVTNAMAYSRCDKFGK 154

[Close]

BLAST of HG10021644 vs. ExPASy Swiss-Prot
Match: Q86I95 (Uncharacterized Golgi apparatus membrane protein-like protein 1 OS=Dictyostelium discoideum OX=44689 GN=DDB_G0276319 PE=3 SV=1)

HSP 1 Score: 119.8 bits (299), Expect = 3.3e-26
Identity = 69/171 (40.35%), Postives = 99/171 (57.89%), Query Frame = 0


Query: 6   QPPVENYANPKTCFFHVLFKAGALVFYILSSLFFNSFVIIFVVTVFLAALDFWVVKNVSG 65
           QP      +P + FFH+ FK  A+  +ILSS     FV+ F++    +A DFWV KNV+G
Sbjct: 25  QPQSNAPKHPISVFFHLFFKIVAVAIFILSSFVNIGFVLTFIIVTLSSAFDFWVTKNVTG 84

Query: 66  RILVGLRWWNEINDLGESVWKFESLDQESLSRMNKKDSWLFWWTLYLTAVAWTVLGIFSL 125
           R LVGLRWWN+I + G + W FES+  +  S++N  +S +FW  +     AW V  I SL
Sbjct: 85  RKLVGLRWWNQIKEDGTNNWVFESVQDK--SQVNPAESLMFWVPVLAFTAAWFVFSIISL 144

Query: 126 IKFQADYLLVVGVCLTLSVANIIGFTKCRKDAKKQF----QQFATQTIASQ 173
                 +L+V  VC  L+ AN++G+ KC KDA+K+     Q +   TI +Q
Sbjct: 145 FGLSFLWLVVEIVCFLLAGANLLGYIKCAKDARKKVKGMAQSYIVGTIVNQ 193

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BLAST of HG10021644 vs. ExPASy TrEMBL
Match: A0A1S4DU76 (Golgi apparatus membrane protein TVP23 OS=Cucumis melo OX=3656 GN=LOC103486078 PE=3 SV=1)

HSP 1 Score: 355.9 bits (912), Expect = 1.0e-94
Identity = 181/184 (98.37%), Postives = 183/184 (99.46%), Query Frame = 0


Query: 1   MMPLLQPPVENYANPKTCFFHVLFKAGALVFYILSSLFFNSFVIIFVVTVFLAALDFWVV 60
           M+PLLQPPVENYANPKTCFFHVLFKAGAL FYILSSLFFNSFVIIFVVTVFLAALDFWVV
Sbjct: 1   MIPLLQPPVENYANPKTCFFHVLFKAGALAFYILSSLFFNSFVIIFVVTVFLAALDFWVV 60

Query: 61  KNVSGRILVGLRWWNEINDLGESVWKFESLDQESLSRMNKKDSWLFWWTLYLTAVAWTVL 120
           KNVSGRILVGLRWWNEINDLGESVWKFESLDQESLSRMNKKDSWLFWWTLYLTAVAWTVL
Sbjct: 61  KNVSGRILVGLRWWNEINDLGESVWKFESLDQESLSRMNKKDSWLFWWTLYLTAVAWTVL 120

Query: 121 GIFSLIKFQADYLLVVGVCLTLSVANIIGFTKCRKDAKKQFQQFATQTIASQFSSTLQSA 180
           GIFSLIKFQADYLLVVGVCLTLS+ANIIGFTKCRKDAKKQFQQFATQTIASQFSSTLQSA
Sbjct: 121 GIFSLIKFQADYLLVVGVCLTLSIANIIGFTKCRKDAKKQFQQFATQTIASQFSSTLQSA 180

Query: 181 FSVV 185
           FSVV
Sbjct: 181 FSVV 184

[Close]

BLAST of HG10021644 vs. ExPASy TrEMBL
Match: A0A5D3C299 (Golgi apparatus membrane protein TVP23 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold83G001860 PE=3 SV=1)

HSP 1 Score: 348.2 bits (892), Expect = 2.1e-92
Identity = 177/179 (98.88%), Postives = 178/179 (99.44%), Query Frame = 0


Query: 6   QPPVENYANPKTCFFHVLFKAGALVFYILSSLFFNSFVIIFVVTVFLAALDFWVVKNVSG 65
           QPPVENYANPKTCFFHVLFKAGAL FYILSSLFFNSFVIIFVVTVFLAALDFWVVKNVSG
Sbjct: 5   QPPVENYANPKTCFFHVLFKAGALAFYILSSLFFNSFVIIFVVTVFLAALDFWVVKNVSG 64

Query: 66  RILVGLRWWNEINDLGESVWKFESLDQESLSRMNKKDSWLFWWTLYLTAVAWTVLGIFSL 125
           RILVGLRWWNEINDLGESVWKFESLDQESLSRMNKKDSWLFWWTLYLTAVAWTVLGIFSL
Sbjct: 65  RILVGLRWWNEINDLGESVWKFESLDQESLSRMNKKDSWLFWWTLYLTAVAWTVLGIFSL 124

Query: 126 IKFQADYLLVVGVCLTLSVANIIGFTKCRKDAKKQFQQFATQTIASQFSSTLQSAFSVV 185
           IKFQADYLLVVGVCLTLS+ANIIGFTKCRKDAKKQFQQFATQTIASQFSSTLQSAFSVV
Sbjct: 125 IKFQADYLLVVGVCLTLSIANIIGFTKCRKDAKKQFQQFATQTIASQFSSTLQSAFSVV 183

[Close]

BLAST of HG10021644 vs. ExPASy TrEMBL
Match: A0A0A0L2G2 (Golgi apparatus membrane protein TVP23 OS=Cucumis sativus OX=3659 GN=Csa_4G499830 PE=3 SV=1)

HSP 1 Score: 348.2 bits (892), Expect = 2.1e-92
Identity = 177/179 (98.88%), Postives = 178/179 (99.44%), Query Frame = 0


Query: 6   QPPVENYANPKTCFFHVLFKAGALVFYILSSLFFNSFVIIFVVTVFLAALDFWVVKNVSG 65
           QPPVENYANPKTCFFHVLFKAGAL FYILSSLFFNSFVIIFVVTVFLAALDFWVVKNVSG
Sbjct: 5   QPPVENYANPKTCFFHVLFKAGALAFYILSSLFFNSFVIIFVVTVFLAALDFWVVKNVSG 64

Query: 66  RILVGLRWWNEINDLGESVWKFESLDQESLSRMNKKDSWLFWWTLYLTAVAWTVLGIFSL 125
           RILVGLRWWNEINDLGESVWKFESLDQESLSRMNKKDSWLFWWTLYLTAVAWTVLGIFSL
Sbjct: 65  RILVGLRWWNEINDLGESVWKFESLDQESLSRMNKKDSWLFWWTLYLTAVAWTVLGIFSL 124

Query: 126 IKFQADYLLVVGVCLTLSVANIIGFTKCRKDAKKQFQQFATQTIASQFSSTLQSAFSVV 185
           IKFQADYLLVVGVCLTLS+ANIIGFTKCRKDAKKQFQQFATQTIASQFSSTLQSAFSVV
Sbjct: 125 IKFQADYLLVVGVCLTLSIANIIGFTKCRKDAKKQFQQFATQTIASQFSSTLQSAFSVV 183

[Close]

BLAST of HG10021644 vs. ExPASy TrEMBL
Match: A0A1S3B4J1 (Golgi apparatus membrane protein TVP23 OS=Cucumis melo OX=3656 GN=LOC103486078 PE=3 SV=1)

HSP 1 Score: 348.2 bits (892), Expect = 2.1e-92
Identity = 177/179 (98.88%), Postives = 178/179 (99.44%), Query Frame = 0


Query: 6   QPPVENYANPKTCFFHVLFKAGALVFYILSSLFFNSFVIIFVVTVFLAALDFWVVKNVSG 65
           QPPVENYANPKTCFFHVLFKAGAL FYILSSLFFNSFVIIFVVTVFLAALDFWVVKNVSG
Sbjct: 5   QPPVENYANPKTCFFHVLFKAGALAFYILSSLFFNSFVIIFVVTVFLAALDFWVVKNVSG 64

Query: 66  RILVGLRWWNEINDLGESVWKFESLDQESLSRMNKKDSWLFWWTLYLTAVAWTVLGIFSL 125
           RILVGLRWWNEINDLGESVWKFESLDQESLSRMNKKDSWLFWWTLYLTAVAWTVLGIFSL
Sbjct: 65  RILVGLRWWNEINDLGESVWKFESLDQESLSRMNKKDSWLFWWTLYLTAVAWTVLGIFSL 124

Query: 126 IKFQADYLLVVGVCLTLSVANIIGFTKCRKDAKKQFQQFATQTIASQFSSTLQSAFSVV 185
           IKFQADYLLVVGVCLTLS+ANIIGFTKCRKDAKKQFQQFATQTIASQFSSTLQSAFSVV
Sbjct: 125 IKFQADYLLVVGVCLTLSIANIIGFTKCRKDAKKQFQQFATQTIASQFSSTLQSAFSVV 183

[Close]

BLAST of HG10021644 vs. ExPASy TrEMBL
Match: A0A5A7TM30 (Golgi apparatus membrane protein TVP23 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold2741G00010 PE=3 SV=1)

HSP 1 Score: 346.3 bits (887), Expect = 8.0e-92
Identity = 176/178 (98.88%), Postives = 177/178 (99.44%), Query Frame = 0


Query: 7   PPVENYANPKTCFFHVLFKAGALVFYILSSLFFNSFVIIFVVTVFLAALDFWVVKNVSGR 66
           PPVENYANPKTCFFHVLFKAGAL FYILSSLFFNSFVIIFVVTVFLAALDFWVVKNVSGR
Sbjct: 88  PPVENYANPKTCFFHVLFKAGALAFYILSSLFFNSFVIIFVVTVFLAALDFWVVKNVSGR 147

Query: 67  ILVGLRWWNEINDLGESVWKFESLDQESLSRMNKKDSWLFWWTLYLTAVAWTVLGIFSLI 126
           ILVGLRWWNEINDLGESVWKFESLDQESLSRMNKKDSWLFWWTLYLTAVAWTVLGIFSLI
Sbjct: 148 ILVGLRWWNEINDLGESVWKFESLDQESLSRMNKKDSWLFWWTLYLTAVAWTVLGIFSLI 207

Query: 127 KFQADYLLVVGVCLTLSVANIIGFTKCRKDAKKQFQQFATQTIASQFSSTLQSAFSVV 185
           KFQADYLLVVGVCLTLS+ANIIGFTKCRKDAKKQFQQFATQTIASQFSSTLQSAFSVV
Sbjct: 208 KFQADYLLVVGVCLTLSIANIIGFTKCRKDAKKQFQQFATQTIASQFSSTLQSAFSVV 265

[Close]

BLAST of HG10021644 vs. TAIR 10
Match: AT1G09330.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: integral to membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF846, eukaryotic (InterPro:IPR008564); Has 518 Blast hits to 518 proteins in 206 species: Archae - 0; Bacteria - 0; Metazoa - 193; Fungi - 145; Plants - 73; Viruses - 0; Other Eukaryotes - 107 (source: NCBI BLink). )

HSP 1 Score: 314.3 bits (804), Expect = 6.4e-86
Identity = 155/180 (86.11%), Postives = 170/180 (94.44%), Query Frame = 0


Query: 5   LQPPVENYANPKTCFFHVLFKAGALVFYILSSLFFNSFVIIFVVTVFLAALDFWVVKNVS 64
           +Q PVENYANP+TC FHVLFK  AL FYILS+LFFNSFVIIFVVTV LAALDFWVVKNVS
Sbjct: 7   IQAPVENYANPRTCLFHVLFKGAALAFYILSALFFNSFVIIFVVTVLLAALDFWVVKNVS 66

Query: 65  GRILVGLRWWNEINDLGESVWKFESLDQESLSRMNKKDSWLFWWTLYLTAVAWTVLGIFS 124
           GRILVGLRWWNEINDLGESVWKFESLDQESL+RMNKKDSWLFWWTLYL A AW +LG+FS
Sbjct: 67  GRILVGLRWWNEINDLGESVWKFESLDQESLARMNKKDSWLFWWTLYLAAAAWFILGVFS 126

Query: 125 LIKFQADYLLVVGVCLTLSVANIIGFTKCRKDAKKQFQQFATQTIASQFSSTLQSAFSVV 184
           LI+FQADYLLVVGVCL+L+VANIIGFTKC+KDAKKQFQQFA+QTIAS+F ST+QSAF++V
Sbjct: 127 LIRFQADYLLVVGVCLSLNVANIIGFTKCKKDAKKQFQQFASQTIASRFQSTVQSAFTLV 186

The following BLAST results are available for this feature:

BLAST of HG10021644 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_016899529.1	2.1e-94	98.37	PREDICTED: Golgi apparatus membrane protein-like protein ECHIDNA isoform X1 [Cuc...	[more]
XP_004151115.1	4.3e-92	98.88	Golgi apparatus membrane protein-like protein ECHIDNA [Cucumis sativus] >XP_0084...	[more]
KAA0044244.1	1.6e-91	98.88	Golgi apparatus membrane protein-like protein ECHIDNA isoform X1 [Cucumis melo v...	[more]
XP_022961588.1	2.8e-91	95.60	Golgi apparatus membrane protein-like protein ECHIDNA isoform X1 [Cucurbita mosc...	[more]
XP_022159687.1	4.8e-91	98.32	Golgi apparatus membrane protein-like protein ECHIDNA [Momordica charantia]	[more]

BLAST of HG10021644 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LEK2	9.1e-85	86.11	Golgi apparatus membrane protein-like protein ECHIDNA OS=Arabidopsis thaliana OX...	[more]
Q8IQC1	1.4e-29	40.61	Uncharacterized Golgi apparatus membrane protein-like protein CG5021 OS=Drosophi...	[more]
Q9Y7K7	2.3e-27	41.92	Golgi apparatus membrane protein tvp23 OS=Schizosaccharomyces pombe (strain 972 ...	[more]
Q6C7V5	1.5e-26	42.47	Golgi apparatus membrane protein TVP23 OS=Yarrowia lipolytica (strain CLIB 122 /...	[more]
Q86I95	3.3e-26	40.35	Uncharacterized Golgi apparatus membrane protein-like protein 1 OS=Dictyostelium...	[more]

BLAST of HG10021644 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S4DU76	1.0e-94	98.37	Golgi apparatus membrane protein TVP23 OS=Cucumis melo OX=3656 GN=LOC103486078 P...	[more]
A0A5D3C299	2.1e-92	98.88	Golgi apparatus membrane protein TVP23 OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A0A0L2G2	2.1e-92	98.88	Golgi apparatus membrane protein TVP23 OS=Cucumis sativus OX=3659 GN=Csa_4G49983...	[more]
A0A1S3B4J1	2.1e-92	98.88	Golgi apparatus membrane protein TVP23 OS=Cucumis melo OX=3656 GN=LOC103486078 P...	[more]
A0A5A7TM30	8.0e-92	98.88	Golgi apparatus membrane protein TVP23 OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]

BLAST of HG10021644 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G09330.1	6.4e-86	86.11	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008564	Golgi apparatus membrane protein TVP23-like	PFAM	PF05832	DUF846	coord: 14..153 e-value: 8.8E-47 score: 158.6
IPR008564	Golgi apparatus membrane protein TVP23-like	PANTHER	PTHR13019	UNCHARACTERIZED	coord: 5..184
None	No IPR available	PANTHER	PTHR13019:SF20	GOLGI APPARATUS MEMBRANE PROTEIN TVP23	coord: 5..184
None	No IPR available	PANTHER	PTHR13019:SF21	GOLGI APPARATUS MEMBRANE PROTEIN TVP23	coord: 5..184

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10021644.1	HG10021644.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009306	protein secretion
biological_process	GO:0016192	vesicle-mediated transport
cellular_component	GO:0030173	integral component of Golgi membrane
cellular_component	GO:0016021	integral component of membrane