HG10021629 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview
NameHG10021629
Typegene
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionCCHC-type domain-containing protein
LocationChr05: 12804592 .. 12805689 (+)
RNA-Seq ExpressionHG10021629
SyntenyHG10021629
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAATTGATGAGCTTATGGAGGCGTGGAAGAATTTTGATTTGACGACGGAGGAAGATACTTCTCCGATTGGAATTATTCCAGAAATAGTTGGTGATATTAGTGGAGAACTAGATTTCTGCGTGATTAGTAAACTTTTGTCTTCAAGAATCATCTCGGCTGGAGCAATAAGGCGTGCCTTTGCAAATGCTTGGAGGATGAATCTTGGGTTTAGTGTGGAAAATATTGGCAAAAATCTTTTTCTTTTTAAGTTCTGTAGAAAGCTAGATAAATTGTGGGTTCTTAAGGCAGGCCCCTGGCTGTTTGATAAATTTTTGTTGGTATTGGAAGAGTCCAAGATTGATATGAAGCCGTCTATGTTGAGTTTTAACAAGACTGCCTTTTGGGTGAGATTTTTGGATCTTCCGTTTGGGTTTCAAAATAAGTTGATGGCCAAAAAACTTGGAGATGCTATTGGCGAGTTTTTGGAGGTTGACTGTGATCAAAATGATTTCTGTTGGGGAGAATCTTTTCGTATTAAGGTTCTTATAGATATTAATAAACCTCTGCGAAGAGGTTTAAAGATTCAACCTTTTCTCCATAACAAGACTGGGTGGGTGGATATTAGATATGAACGTCTTCCAGACTTCTGTTACGCTTGTGGATGTATTGGACATGCTACGAAAGATTGTGAGACAATGGCTGATTTGGTTTCTCCCATCTTAAGGAAATCCTATCAATATGGACCTTGGTTACGTTTTCAAGGTAGCCCCAATATCATGAAAAGAAATCCTCCAGATCCTAAGAGCCCTTCAAAGAAAGATTCTCCGTCTGATAAGATCCCTGTGGAAGAAGTAATGCCAAACCCACAGGATAAAGTGGAAAAAGGTAGGGGAACTCTTGAGGATAATGAAAAGATTTTTGAATTTCAAGCCCAAGATCTTGCAAAGAATTCTTGTTTGGGGTACAGGAAGGATGAGCCAGTTTTGTCTGCAGTATCATCTTTTTCATCACCAGTTCTTCATGTGGGGCTGGACAAAGAGCTGTTATTTACGTGTGCTAGTTCAGATCCTTGGAACAAAATATTTCGTCTGATATTGGAAGATGTCAGTCTATAG

mRNA sequence

ATGGAAATTGATGAGCTTATGGAGGCGTGGAAGAATTTTGATTTGACGACGGAGGAAGATACTTCTCCGATTGGAATTATTCCAGAAATAGTTGGTGATATTAGTGGAGAACTAGATTTCTGCGTGATTAGTAAACTTTTGTCTTCAAGAATCATCTCGGCTGGAGCAATAAGGCGTGCCTTTGCAAATGCTTGGAGGATGAATCTTGGGTTTAGTGTGGAAAATATTGGCAAAAATCTTTTTCTTTTTAAGTTCTGTAGAAAGCTAGATAAATTGTGGGTTCTTAAGGCAGGCCCCTGGCTGTTTGATAAATTTTTGTTGGTATTGGAAGAGTCCAAGATTGATATGAAGCCGTCTATGTTGAGTTTTAACAAGACTGCCTTTTGGGTGAGATTTTTGGATCTTCCGTTTGGGTTTCAAAATAAGTTGATGGCCAAAAAACTTGGAGATGCTATTGGCGAGTTTTTGGAGGTTGACTGTGATCAAAATGATTTCTGTTGGGGAGAATCTTTTCGTATTAAGGTTCTTATAGATATTAATAAACCTCTGCGAAGAGGTTTAAAGATTCAACCTTTTCTCCATAACAAGACTGGGTGGGTGGATATTAGATATGAACGTCTTCCAGACTTCTGTTACGCTTGTGGATGTATTGGACATGCTACGAAAGATTGTGAGACAATGGCTGATTTGGTTTCTCCCATCTTAAGGAAATCCTATCAATATGGACCTTGGTTACGTTTTCAAGGTAGCCCCAATATCATGAAAAGAAATCCTCCAGATCCTAAGAGCCCTTCAAAGAAAGATTCTCCGTCTGATAAGATCCCTGTGGAAGAAGTAATGCCAAACCCACAGGATAAAGTGGAAAAAGGTAGGGGAACTCTTGAGGATAATGAAAAGATTTTTGAATTTCAAGCCCAAGATCTTGCAAAGAATTCTTGTTTGGGGTACAGGAAGGATGAGCCAGTTTTGTCTGCAGTATCATCTTTTTCATCACCAGTTCTTCATGTGGGGCTGGACAAAGAGCTGTTATTTACGTGTGCTAGTTCAGATCCTTGGAACAAAATATTTCGTCTGATATTGGAAGATGTCAGTCTATAG

Coding sequence (CDS)

ATGGAAATTGATGAGCTTATGGAGGCGTGGAAGAATTTTGATTTGACGACGGAGGAAGATACTTCTCCGATTGGAATTATTCCAGAAATAGTTGGTGATATTAGTGGAGAACTAGATTTCTGCGTGATTAGTAAACTTTTGTCTTCAAGAATCATCTCGGCTGGAGCAATAAGGCGTGCCTTTGCAAATGCTTGGAGGATGAATCTTGGGTTTAGTGTGGAAAATATTGGCAAAAATCTTTTTCTTTTTAAGTTCTGTAGAAAGCTAGATAAATTGTGGGTTCTTAAGGCAGGCCCCTGGCTGTTTGATAAATTTTTGTTGGTATTGGAAGAGTCCAAGATTGATATGAAGCCGTCTATGTTGAGTTTTAACAAGACTGCCTTTTGGGTGAGATTTTTGGATCTTCCGTTTGGGTTTCAAAATAAGTTGATGGCCAAAAAACTTGGAGATGCTATTGGCGAGTTTTTGGAGGTTGACTGTGATCAAAATGATTTCTGTTGGGGAGAATCTTTTCGTATTAAGGTTCTTATAGATATTAATAAACCTCTGCGAAGAGGTTTAAAGATTCAACCTTTTCTCCATAACAAGACTGGGTGGGTGGATATTAGATATGAACGTCTTCCAGACTTCTGTTACGCTTGTGGATGTATTGGACATGCTACGAAAGATTGTGAGACAATGGCTGATTTGGTTTCTCCCATCTTAAGGAAATCCTATCAATATGGACCTTGGTTACGTTTTCAAGGTAGCCCCAATATCATGAAAAGAAATCCTCCAGATCCTAAGAGCCCTTCAAAGAAAGATTCTCCGTCTGATAAGATCCCTGTGGAAGAAGTAATGCCAAACCCACAGGATAAAGTGGAAAAAGGTAGGGGAACTCTTGAGGATAATGAAAAGATTTTTGAATTTCAAGCCCAAGATCTTGCAAAGAATTCTTGTTTGGGGTACAGGAAGGATGAGCCAGTTTTGTCTGCAGTATCATCTTTTTCATCACCAGTTCTTCATGTGGGGCTGGACAAAGAGCTGTTATTTACGTGTGCTAGTTCAGATCCTTGGAACAAAATATTTCGTCTGATATTGGAAGATGTCAGTCTATAG

Protein sequence

MEIDELMEAWKNFDLTTEEDTSPIGIIPEIVGDISGELDFCVISKLLSSRIISAGAIRRAFANAWRMNLGFSVENIGKNLFLFKFCRKLDKLWVLKAGPWLFDKFLLVLEESKIDMKPSMLSFNKTAFWVRFLDLPFGFQNKLMAKKLGDAIGEFLEVDCDQNDFCWGESFRIKVLIDINKPLRRGLKIQPFLHNKTGWVDIRYERLPDFCYACGCIGHATKDCETMADLVSPILRKSYQYGPWLRFQGSPNIMKRNPPDPKSPSKKDSPSDKIPVEEVMPNPQDKVEKGRGTLEDNEKIFEFQAQDLAKNSCLGYRKDEPVLSAVSSFSSPVLHVGLDKELLFTCASSDPWNKIFRLILEDVSL
Homology
BLAST of HG10021629 vs. NCBI nr
Match: XP_022156185.1 (uncharacterized protein LOC111023135 [Momordica charantia] >XP_022156186.1 uncharacterized protein LOC111023135 [Momordica charantia])

HSP 1 Score: 244.2 bits (622), Expect = 1.7e-60
Identity = 130/312 (41.67%), Postives = 183/312 (58.65%), Query Frame = 0

Query: 1   MEIDELMEAWKNFDLTTEEDTSPIGIIPEIVGDISGELDFCVISKLLSSRIISAGAIRRA 60
           M+ + L+  W+ F LT+EED   + +  + V      L + ++ KLL+ RIISA  + R 
Sbjct: 1   MDHENLLADWQKFKLTSEEDEIAMDVDVDAVKMAEQGLAYSLVGKLLAKRIISADVLSRV 60

Query: 61  FANAWRMNLGFSVENIGKNLFLFKFCRKLDKLWVLKAGPWLFDKFLLVLEESKIDMKPSM 120
              AW++    +VE+IGKNLFLF FCR+ D   V+K GPW FDK L+VL++       S 
Sbjct: 61  LLLAWKVEHQLTVESIGKNLFLFHFCRECDMNRVMKTGPWFFDKALIVLQKPCSSKNISE 120

Query: 121 LSFNKTAFWVRFLDLPFGFQNKLMAKKLGDAIGEFLEVDCDQNDFCWGESFRIKVLIDIN 180
           L FN+ AFW+   DLP  + NK MA +LG+AIG F++VDC++  F WG S RI+VLIDI 
Sbjct: 121 LEFNRVAFWIHLFDLPMSWLNKTMAIRLGNAIGNFVDVDCNEKGFSWGASLRIRVLIDIT 180

Query: 181 KPLRRGLKIQPFLHNKTGWVDIRYERLPDFCYACGCIGHATKDCETMADLVSPILRKSYQ 240
           KPLRRG+KI         W+ I+YERLPDFCY CG IGH++ DC+          R + +
Sbjct: 181 KPLRRGIKINIDGPMGGCWIPIQYERLPDFCYFCGVIGHSSHDCDARYLAAQDDSRATSE 240

Query: 241 YGPWLRFQGSPNIMKRNPPDPKSPSKKDSPSDKIPVEEVMPNPQDKVEKGRGTLEDNEKI 300
           YGPWLRF GS    ++     KSP+++DS          M + +  VE+ +  L +    
Sbjct: 241 YGPWLRFVGSKAGAQKGRKG-KSPAREDSCG-----SSSMNSKERGVEETKQQLSEQTNQ 300

Query: 301 FEFQAQDLAKNS 313
             FQ+Q  A+ +
Sbjct: 301 DGFQSQAAAEQT 306

BLAST of HG10021629 vs. NCBI nr
Match: XP_022132681.1 (uncharacterized protein LOC111005481 [Momordica charantia])

HSP 1 Score: 211.1 bits (536), Expect = 1.6e-50
Identity = 107/255 (41.96%), Postives = 147/255 (57.65%), Query Frame = 0

Query: 1   MEIDELMEAWKNFDLTTEEDTSPIGIIPEIVGDISGELDFCVISKLLSSRIISAGAIRRA 60
           M    L+E WKNF LT+EED   + I    +      L+  +I KLLS R IS   ++  
Sbjct: 1   MAASNLLEEWKNFKLTSEEDKIAVDIDSSALEGTGKCLELSLICKLLSKRSISCTVLKNT 60

Query: 61  FANAWRMNL-GFSVENIGKNLFLFKFCRKLDKLWVLKAGPWLFDKFLLVLEESKIDMKPS 120
              AW+++   FSV+ IG N+FLF F R  D+  +L+ GPW FD+ L++++      KP 
Sbjct: 61  LKIAWKLDCKAFSVDIIGFNIFLFNFNRSSDRNRILRMGPWTFDRALIIIDNPVSLTKPL 120

Query: 121 MLSFNKTAFWVRFLDLPFGFQNKLMAKKLGDAIGEFLEVDCDQNDFCWGESFRIKVLIDI 180
            + F   + WV F DL     NK MA +LG+AIG F +V+ + N+FCWG   R++V  D+
Sbjct: 121 DMDFRNVSLWVHFFDLSLACMNKTMATRLGNAIGLFEDVESNANNFCWGSCLRVRVRFDV 180

Query: 181 NKPLRRGLKIQPFLHNKTG--WVDIRYERLPDFCYACGCIGHATKDCETMADLVSPILRK 240
            KPL RG+K+   L    G  W+ I+YERLPDF Y CG + H  KDC   +D     + K
Sbjct: 181 MKPLHRGIKLN--LDGPMGGCWIPIQYERLPDFRYHCGRLDHILKDC---SDCCVDSVSK 240

Query: 241 SYQYGPWLRFQGSPN 253
           + QYGPWLRFQG  N
Sbjct: 241 NLQYGPWLRFQGHKN 250

BLAST of HG10021629 vs. NCBI nr
Match: XP_022158377.1 (uncharacterized protein LOC111024874 [Momordica charantia])

HSP 1 Score: 200.3 bits (508), Expect = 2.9e-47
Identity = 102/263 (38.78%), Postives = 148/263 (56.27%), Query Frame = 0

Query: 5   ELMEAWKNFDLTTEEDTSPIGIIPEIVGDISGELDFCVISKLLSSRIISAGAIRRAFANA 64
           +L+E WKNF LT+EE+ + I +           L+  ++ KL   R I+   ++     A
Sbjct: 5   DLLEEWKNFKLTSEEEETAIDVDASAPATTGSRLEQILVGKLFIKRPITCPVMKNTMRTA 64

Query: 65  WRM-NLGFSVENIGKNLFLFKFCRKLDKLWVLKAGPWLFDKFLLVLEESKIDMKPSMLSF 124
           W++ N  F V+++G NLFLF F R LD+  + K+GPW FD+ L+++ +    + PS L F
Sbjct: 65  WKLENNAFEVQSLGYNLFLFSFARALDRNKIYKSGPWTFDRTLVLINKPVALIPPSELDF 124

Query: 125 NKTAFWVRFLDLPFGFQNKLMAKKLGDAIGEFLEVDCDQNDFCWGESFRIKVLIDINKPL 184
            K   WVRF DLP G   + MA +LG+A+G F E DCD  +  WG + R++V++DI+KPL
Sbjct: 125 TKLPIWVRFFDLPLGCITRDMAIRLGNALGGFEEADCDDLNPDWGSNLRVRVMLDISKPL 184

Query: 185 RRGLKIQPFLHNKTGWVDIRYERLPDFCYACGCIGHATKDCETMADLVSPILRKSYQYGP 244
           RRG+K+         W+ I+YERLPDFCY CG                    RK +QYG 
Sbjct: 185 RRGIKLNLDGPIGGAWIPIQYERLPDFCYHCGLSSS----------------RKKHQYGS 244

Query: 245 WLRFQGSPNIMKRNPPDPKSPSK 267
           WLR+QG+   +K   P  K P +
Sbjct: 245 WLRYQGT---VKPTMPQMKQPQE 248

BLAST of HG10021629 vs. NCBI nr
Match: XP_028122006.1 (uncharacterized protein LOC114319195 [Camellia sinensis])

HSP 1 Score: 189.1 bits (479), Expect = 6.7e-44
Identity = 90/243 (37.04%), Postives = 139/243 (57.20%), Query Frame = 0

Query: 4   DELMEAWKNFDLTTEEDTSPIGIIPEIVGDISGELDFCVISKLLSSRIISAGAIRRAFAN 63
           D L++  +   LT+EED + + I  E    + G+ D C++ KLL+ R  +  A++    +
Sbjct: 3   DSLLDLTRTLSLTSEED-AVVRIGGESTSLMMGKSDMCLVGKLLTRRPFNVEAMKNTLLS 62

Query: 64  AWRMNLGFSVENIGKNLFLFKFCRKLDKLWVLKAGPWLFDKFLLVLEESKIDMKPSMLSF 123
            W+   G  V  IG NLF+F F   +DK  VL  GPW FDK LL+L E   +++PS +  
Sbjct: 63  VWQPTKGMQVRVIGDNLFVFVFGHVVDKRRVLSDGPWTFDKHLLMLGEMDPNVQPSDIQL 122

Query: 124 NKTAFWVRFLDLPFGFQNKLMAKKLGDAIGEFLEVDCDQNDFCWGESFRIKVLIDINKPL 183
            +  FWV   +LP    NK + + +G+A+G+F+++D +     WG + RI+V +D+ KPL
Sbjct: 123 TRVQFWVHVCNLPLVLMNKKVGEIVGNAVGQFIDMDYEDGGIVWGRTMRIRVALDVRKPL 182

Query: 184 RRGLKIQPFLHNKTGWVDIRYERLPDFCYACGCIGHATKDCETMADLVSPILRKSYQYGP 243
           RRG+K+      +  WVD +YERLP +CY CG +GH+ ++C+            S QYG 
Sbjct: 183 RRGMKL-ALSSAEPIWVDFKYERLPIYCYFCGRLGHSERECDDKLSSADGSRVDSLQYGA 242

Query: 244 WLR 247
           WLR
Sbjct: 243 WLR 243

BLAST of HG10021629 vs. NCBI nr
Match: XP_021749920.1 (uncharacterized protein LOC110715641 [Chenopodium quinoa])

HSP 1 Score: 188.7 bits (478), Expect = 8.7e-44
Identity = 93/245 (37.96%), Postives = 150/245 (61.22%), Query Frame = 0

Query: 4   DELMEAWKNFDLTTEEDTSPIG--IIPEIVGDISGELDFCVISKLLSSRIISAGAIRRAF 63
           DEL++ W+ F L TEE++S IG     E VG  +  ++  ++ +L + +  +  A++R  
Sbjct: 3   DELVQDWERFRL-TEEESSIIGEPSHDEEVGASNNRIELALVGRLCTVKPFNIAAMKRTL 62

Query: 64  ANAWRMNLGFSVENIGKNLFLFKFCRKLDKLWVLKAGPWLFDKFLLVLEESKIDMKPSML 123
           +N W ++   +++ I  NLF+F+F  + DK  +L   PW FD  LL+L+E   D +PS +
Sbjct: 63  SNVWGLDDNVAIKMIETNLFVFQFVNEEDKNRILGGMPWFFDGKLLLLKEIIGDEQPSEI 122

Query: 124 SFNKTAFWVRFLDLPFGFQNKLMAKKLGDAIGEFLEVDCDQNDFCWGESFRIKVLIDINK 183
            F++   WVR +D+PF  +N  + +++GD++G F+++D D +   WGE  RIKVL++++K
Sbjct: 123 VFDRAPMWVRIMDVPFNKRNLSVMREVGDSLGGFVKID-DADPLGWGEFIRIKVLVEVHK 182

Query: 184 PLRRGLKIQPFLHNKTGWVDIRYERLPDFCYACGCIGHATKDCETMADLVSPILRKSYQY 243
           PLRRG+ +    + K  WVDI+YERL DFC+ CG + H  K+C    +         YQY
Sbjct: 183 PLRRGVFLAGG-NGKAKWVDIKYERLSDFCFYCGILDHTDKECTKKEEEDDSSTEVVYQY 242

Query: 244 GPWLR 247
           GPWLR
Sbjct: 243 GPWLR 244

BLAST of HG10021629 vs. ExPASy TrEMBL
Match: A0A6J1DU55 (uncharacterized protein LOC111023135 OS=Momordica charantia OX=3673 GN=LOC111023135 PE=4 SV=1)

HSP 1 Score: 244.2 bits (622), Expect = 8.4e-61
Identity = 130/312 (41.67%), Postives = 183/312 (58.65%), Query Frame = 0

Query: 1   MEIDELMEAWKNFDLTTEEDTSPIGIIPEIVGDISGELDFCVISKLLSSRIISAGAIRRA 60
           M+ + L+  W+ F LT+EED   + +  + V      L + ++ KLL+ RIISA  + R 
Sbjct: 1   MDHENLLADWQKFKLTSEEDEIAMDVDVDAVKMAEQGLAYSLVGKLLAKRIISADVLSRV 60

Query: 61  FANAWRMNLGFSVENIGKNLFLFKFCRKLDKLWVLKAGPWLFDKFLLVLEESKIDMKPSM 120
              AW++    +VE+IGKNLFLF FCR+ D   V+K GPW FDK L+VL++       S 
Sbjct: 61  LLLAWKVEHQLTVESIGKNLFLFHFCRECDMNRVMKTGPWFFDKALIVLQKPCSSKNISE 120

Query: 121 LSFNKTAFWVRFLDLPFGFQNKLMAKKLGDAIGEFLEVDCDQNDFCWGESFRIKVLIDIN 180
           L FN+ AFW+   DLP  + NK MA +LG+AIG F++VDC++  F WG S RI+VLIDI 
Sbjct: 121 LEFNRVAFWIHLFDLPMSWLNKTMAIRLGNAIGNFVDVDCNEKGFSWGASLRIRVLIDIT 180

Query: 181 KPLRRGLKIQPFLHNKTGWVDIRYERLPDFCYACGCIGHATKDCETMADLVSPILRKSYQ 240
           KPLRRG+KI         W+ I+YERLPDFCY CG IGH++ DC+          R + +
Sbjct: 181 KPLRRGIKINIDGPMGGCWIPIQYERLPDFCYFCGVIGHSSHDCDARYLAAQDDSRATSE 240

Query: 241 YGPWLRFQGSPNIMKRNPPDPKSPSKKDSPSDKIPVEEVMPNPQDKVEKGRGTLEDNEKI 300
           YGPWLRF GS    ++     KSP+++DS          M + +  VE+ +  L +    
Sbjct: 241 YGPWLRFVGSKAGAQKGRKG-KSPAREDSCG-----SSSMNSKERGVEETKQQLSEQTNQ 300

Query: 301 FEFQAQDLAKNS 313
             FQ+Q  A+ +
Sbjct: 301 DGFQSQAAAEQT 306

BLAST of HG10021629 vs. ExPASy TrEMBL
Match: A0A6J1BSZ1 (uncharacterized protein LOC111005481 OS=Momordica charantia OX=3673 GN=LOC111005481 PE=4 SV=1)

HSP 1 Score: 211.1 bits (536), Expect = 7.9e-51
Identity = 107/255 (41.96%), Postives = 147/255 (57.65%), Query Frame = 0

Query: 1   MEIDELMEAWKNFDLTTEEDTSPIGIIPEIVGDISGELDFCVISKLLSSRIISAGAIRRA 60
           M    L+E WKNF LT+EED   + I    +      L+  +I KLLS R IS   ++  
Sbjct: 1   MAASNLLEEWKNFKLTSEEDKIAVDIDSSALEGTGKCLELSLICKLLSKRSISCTVLKNT 60

Query: 61  FANAWRMNL-GFSVENIGKNLFLFKFCRKLDKLWVLKAGPWLFDKFLLVLEESKIDMKPS 120
              AW+++   FSV+ IG N+FLF F R  D+  +L+ GPW FD+ L++++      KP 
Sbjct: 61  LKIAWKLDCKAFSVDIIGFNIFLFNFNRSSDRNRILRMGPWTFDRALIIIDNPVSLTKPL 120

Query: 121 MLSFNKTAFWVRFLDLPFGFQNKLMAKKLGDAIGEFLEVDCDQNDFCWGESFRIKVLIDI 180
            + F   + WV F DL     NK MA +LG+AIG F +V+ + N+FCWG   R++V  D+
Sbjct: 121 DMDFRNVSLWVHFFDLSLACMNKTMATRLGNAIGLFEDVESNANNFCWGSCLRVRVRFDV 180

Query: 181 NKPLRRGLKIQPFLHNKTG--WVDIRYERLPDFCYACGCIGHATKDCETMADLVSPILRK 240
            KPL RG+K+   L    G  W+ I+YERLPDF Y CG + H  KDC   +D     + K
Sbjct: 181 MKPLHRGIKLN--LDGPMGGCWIPIQYERLPDFRYHCGRLDHILKDC---SDCCVDSVSK 240

Query: 241 SYQYGPWLRFQGSPN 253
           + QYGPWLRFQG  N
Sbjct: 241 NLQYGPWLRFQGHKN 250

BLAST of HG10021629 vs. ExPASy TrEMBL
Match: A0A6J1DX30 (uncharacterized protein LOC111024874 OS=Momordica charantia OX=3673 GN=LOC111024874 PE=4 SV=1)

HSP 1 Score: 200.3 bits (508), Expect = 1.4e-47
Identity = 102/263 (38.78%), Postives = 148/263 (56.27%), Query Frame = 0

Query: 5   ELMEAWKNFDLTTEEDTSPIGIIPEIVGDISGELDFCVISKLLSSRIISAGAIRRAFANA 64
           +L+E WKNF LT+EE+ + I +           L+  ++ KL   R I+   ++     A
Sbjct: 5   DLLEEWKNFKLTSEEEETAIDVDASAPATTGSRLEQILVGKLFIKRPITCPVMKNTMRTA 64

Query: 65  WRM-NLGFSVENIGKNLFLFKFCRKLDKLWVLKAGPWLFDKFLLVLEESKIDMKPSMLSF 124
           W++ N  F V+++G NLFLF F R LD+  + K+GPW FD+ L+++ +    + PS L F
Sbjct: 65  WKLENNAFEVQSLGYNLFLFSFARALDRNKIYKSGPWTFDRTLVLINKPVALIPPSELDF 124

Query: 125 NKTAFWVRFLDLPFGFQNKLMAKKLGDAIGEFLEVDCDQNDFCWGESFRIKVLIDINKPL 184
            K   WVRF DLP G   + MA +LG+A+G F E DCD  +  WG + R++V++DI+KPL
Sbjct: 125 TKLPIWVRFFDLPLGCITRDMAIRLGNALGGFEEADCDDLNPDWGSNLRVRVMLDISKPL 184

Query: 185 RRGLKIQPFLHNKTGWVDIRYERLPDFCYACGCIGHATKDCETMADLVSPILRKSYQYGP 244
           RRG+K+         W+ I+YERLPDFCY CG                    RK +QYG 
Sbjct: 185 RRGIKLNLDGPIGGAWIPIQYERLPDFCYHCGLSSS----------------RKKHQYGS 244

Query: 245 WLRFQGSPNIMKRNPPDPKSPSK 267
           WLR+QG+   +K   P  K P +
Sbjct: 245 WLRYQGT---VKPTMPQMKQPQE 248

BLAST of HG10021629 vs. ExPASy TrEMBL
Match: A0A803N338 (Uncharacterized protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1)

HSP 1 Score: 188.7 bits (478), Expect = 4.2e-44
Identity = 97/245 (39.59%), Postives = 146/245 (59.59%), Query Frame = 0

Query: 4   DELMEAWKNFDLTTEEDTSPIGIIPEI-VGDISGELDFCVISKLLSSRIISAGAIRRAFA 63
           D+L++AW N  LT EE+    G    +   +    +  C++ KLL+ +  +A A++R   
Sbjct: 3   DQLVKAWDNLKLTDEENLVLEGSNSMVDANEPDNRIALCLVGKLLTKKTFNAEAMKRVLK 62

Query: 64  NAWRMNLGFSVENIGKNLFLFKFCRKLDKLWVLKAGPWLFDKFLLVLEESKIDMKPSMLS 123
           N WR++   ++ ++  NLF+F+F +  D+  VL   PW FD   L+L+E   D +PS + 
Sbjct: 63  NLWRIDDNVAIRSVDTNLFVFQFFKTEDREKVLDGRPWGFDNQNLLLKEICADEQPSDVC 122

Query: 124 FNKTAFWVRFLDLPFGFQNKLMAKKLGDAIGEFLEVDCDQNDFCWGESFRIKVLIDINKP 183
           F+   FW+R LD+PFG +    A+++GD IGE LEVD + +   W E  R+KVL++I KP
Sbjct: 123 FDTCPFWIRLLDVPFGKRTSRFAREVGDCIGECLEVD-ESDPIGWEEYMRVKVLVNITKP 182

Query: 184 LRRGLKIQPFLHNKTGWVDIRYERLPDFCYACGCIGHATKDC--ETMADLVSPILRKSYQ 243
           LRRGLK+       T W+ ++YERL DFCY CG IGH  KDC  +   D   P++   +Q
Sbjct: 183 LRRGLKV-AMESGVTKWIGLKYERLGDFCYFCGVIGHNDKDCVEKEKCDDELPLV---FQ 242

Query: 244 YGPWL 246
           YGP+L
Sbjct: 243 YGPYL 242

BLAST of HG10021629 vs. ExPASy TrEMBL
Match: A0A2Z6NZV1 (Uncharacterized protein OS=Trifolium subterraneum OX=3900 GN=TSUD_140560 PE=4 SV=1)

HSP 1 Score: 186.8 bits (473), Expect = 1.6e-43
Identity = 102/263 (38.78%), Postives = 145/263 (55.13%), Query Frame = 0

Query: 7   MEAWKNFDLTTEEDTSPIGIIPEIVGDISGELDFCVISKLLSSRIISAGAIRRAFANAWR 66
           ME  K     TE++   I +  E + +        ++ KL +    +  A ++  A AWR
Sbjct: 1   MEREKQIISPTEDEEDCITVEAEEICEEEETFKRTLVGKLWTENPYNVRAFKQTIAQAWR 60

Query: 67  MNLGFSVENIGKNLFLFKFCRKLDKLWVLKAGPWLFDKFLLVLEESKIDMKPSMLSFNKT 126
           +     V+++ +NLFLF+F  K D   VL+ GPW FD+ LL+L     + +PS L  +  
Sbjct: 61  LKNSIEVQDLEENLFLFRFTTKKDADTVLRNGPWSFDRNLLILHRVSGEEQPSDLDMHNV 120

Query: 127 AFWVRFLDLPFGFQNKLMAKKLGDAIGEFLEVDCDQNDFCWGESFRIKVLIDINKPLRRG 186
            FWVR  DLPF  +++ MAKKLG+ +G F EVD  ++    G   R+K  +D+ KPL+RG
Sbjct: 121 NFWVRVYDLPFKLRSEAMAKKLGNIMGNFEEVD-PKDANRTGRFLRLKASLDLRKPLKRG 180

Query: 187 LKIQPFLHNKTGWVDIRYERLPDFCYACGCIGHATKDCETMADL----VSPILRKSYQYG 246
            KI+    +K  WVD +YERLP+FC+ACG IGH  K+CE + D+     S I  KS  YG
Sbjct: 181 TKIK--FQDKNMWVDFKYERLPNFCFACGKIGHQMKECEDVEDVDENNYSDIAEKSQAYG 240

Query: 247 PWLRFQGSPNIMKRNPPDPKSPS 266
           PWLR    P I +    D  S S
Sbjct: 241 PWLRASPLPRIFEEPRKDASSGS 260

BLAST of HG10021629 vs. TAIR 10
Match: AT3G31430.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G18636.1); Has 295 Blast hits to 291 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 295; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 73.6 bits (179), Expect = 3.8e-13
Identity = 53/211 (25.12%), Postives = 89/211 (42.18%), Query Frame = 0

Query: 14  DLTTEEDTSPIGIIPEIVGDISGELDFCVISKLLSSRIISAGAIRRAFANAWRMNLGFSV 73
           D+    D  P  +  +IV     E  F +  + +  R  +  +I  +    W  +     
Sbjct: 106 DINLGVDDIPFALPEDIVNHAVAENRFILFGRPVMPRRQNLRSIVASMPRIWGQSGLVHG 165

Query: 74  ENIGKNLFLFKFCRKLDKLWVLKAGPWLFDKFLLVLEESKIDMKPSMLSFNKTAFWVRFL 133
             +    F F F  +     VL+ GPW F+ ++++L+      +P +  F    FWV+  
Sbjct: 166 RIMEGRQFHFIFTLEESLETVLRRGPWAFNDWMILLQR----WEPQIPLFPFIPFWVQIR 225

Query: 134 DLPFGFQNKLMAKKLGDAIGEFLEVDCDQNDFCWGESFRIKVLIDINKPLRRGLKIQPFL 193
            +PF F N+ + + +G A+G+ L+ D +       +  R+ +  DI  PLR     Q F 
Sbjct: 226 GIPFQFLNRGVVEHIGRALGQVLDTDFNVEVVARMDFARVLLHWDITHPLRFQRHFQ-FT 285

Query: 194 HNKTGWVDIRYERLPDFCYACGCIGHATKDC 225
                 +  RYERL  FC  CG + H    C
Sbjct: 286 AGVNTLLRFRYERLRGFCEVCGMLTHDFGAC 311

BLAST of HG10021629 vs. TAIR 10
Match: AT3G42140.1 (zinc ion binding;nucleic acid binding )

HSP 1 Score: 52.0 bits (123), Expect = 1.2e-06
Identity = 31/134 (23.13%), Postives = 56/134 (41.79%), Query Frame = 0

Query: 94  VLKAGPWLFDKFLLVLEE-SKIDMKPSMLSFNKTAFWVRFLDLPFGFQNKLMAKKLGDAI 153
           +L+ GPW F+ ++ V++  +K+    S   F +  FW++   +P  F    +   +G+ +
Sbjct: 75  ILRRGPWSFNDWMCVIQRWTKLH---SDAEFKRIPFWIQIRGIPLRFLTARIITSIGERM 134

Query: 154 GEFLEVDCDQNDFCWGESFRIKVLIDINKPLRRGLKIQPFLHNKTGWVDIRYERLPDFCY 213
           G FLE +                       L R + +  F          +YE+L +FC 
Sbjct: 135 GLFLETN-----------------------LGRDVSVLKF----------QYEKLKNFCT 172

Query: 214 ACGCIGHATKDCET 227
            CG + H   +C T
Sbjct: 195 TCGMLSHDASECPT 172

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022156185.11.7e-6041.67uncharacterized protein LOC111023135 [Momordica charantia] >XP_022156186.1 uncha... [more]
XP_022132681.11.6e-5041.96uncharacterized protein LOC111005481 [Momordica charantia][more]
XP_022158377.12.9e-4738.78uncharacterized protein LOC111024874 [Momordica charantia][more]
XP_028122006.16.7e-4437.04uncharacterized protein LOC114319195 [Camellia sinensis][more]
XP_021749920.18.7e-4437.96uncharacterized protein LOC110715641 [Chenopodium quinoa][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1DU558.4e-6141.67uncharacterized protein LOC111023135 OS=Momordica charantia OX=3673 GN=LOC111023... [more]
A0A6J1BSZ17.9e-5141.96uncharacterized protein LOC111005481 OS=Momordica charantia OX=3673 GN=LOC111005... [more]
A0A6J1DX301.4e-4738.78uncharacterized protein LOC111024874 OS=Momordica charantia OX=3673 GN=LOC111024... [more]
A0A803N3384.2e-4439.59Uncharacterized protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1[more]
A0A2Z6NZV11.6e-4338.78Uncharacterized protein OS=Trifolium subterraneum OX=3900 GN=TSUD_140560 PE=4 SV... [more]
Match NameE-valueIdentityDescription
AT3G31430.13.8e-1325.12unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT3G42140.11.2e-0623.13zinc ion binding;nucleic acid binding [more]
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR025558Domain of unknown function DUF4283PFAMPF14111DUF4283coord: 36..175
e-value: 9.2E-26
score: 90.1
IPR025836Zinc knuckle CX2CX4HX4CPFAMPF14392zf-CCHC_4coord: 177..225
e-value: 3.6E-14
score: 52.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 250..291
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 260..274
NoneNo IPR availablePANTHERPTHR31286:SF84SUBFAMILY NOT NAMEDcoord: 24..289
IPR040256Uncharacterized protein At4g02000-likePANTHERPTHR31286GLYCINE-RICH CELL WALL STRUCTURAL PROTEIN 1.8-LIKEcoord: 24..289
IPR001878Zinc finger, CCHC-typePROSITEPS50158ZF_CCHCcoord: 211..224
score: 9.207683

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
HG10021629.1HG10021629.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0008270 zinc ion binding