HG10021625 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10021625
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	NADH-u_ox-rdase domain-containing protein
Location	Chr05: 12720125 .. 12720518 (-)
RNA-Seq Expression	HG10021625
Synteny	HG10021625

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAACACCGACATTACGGCGTCGACCAAGCCAGAGTACCCAGTAATAGATCGGAACCCTCCATTCACTAAAGTCGTCGGCAATTTCGACACTCTCGATTACCTCCGTTTCGTCACCATCACCGGTGTTTCCGTCTCCGTCGGTTATCTTTCGGGTATCAATTTCTTTCTTGCTTCTCTTTTTCTTTTGTCATCTTCCATTTCGTTACTCATCTGGAAATCTGTTCTCCTGTCTTTGCGTTTTAGGGATTAAGCCCGGGATTAGGGGCCCGTCAATGGTGACCGGTGGTCTAATTGGCCTGATGGGAGGCTTCATGTACGCTTATCAGAACTCGGCGGGTCGGCTTATGGGATTCTTCCCCAATGAAGGCGAGGTAGCTCGTTATAAGAAATAA

mRNA sequence

ATGAACACCGACATTACGGCGTCGACCAAGCCAGAGTACCCAGTAATAGATCGGAACCCTCCATTCACTAAAGTCGTCGGCAATTTCGACACTCTCGATTACCTCCGTTTCGTCACCATCACCGGTGTTTCCGTCTCCGTCGGTTATCTTTCGGGGATTAAGCCCGGGATTAGGGGCCCGTCAATGGTGACCGGTGGTCTAATTGGCCTGATGGGAGGCTTCATGTACGCTTATCAGAACTCGGCGGGTCGGCTTATGGGATTCTTCCCCAATGAAGGCGAGGTAGCTCGTTATAAGAAATAA

Coding sequence (CDS)

ATGAACACCGACATTACGGCGTCGACCAAGCCAGAGTACCCAGTAATAGATCGGAACCCTCCATTCACTAAAGTCGTCGGCAATTTCGACACTCTCGATTACCTCCGTTTCGTCACCATCACCGGTGTTTCCGTCTCCGTCGGTTATCTTTCGGGGATTAAGCCCGGGATTAGGGGCCCGTCAATGGTGACCGGTGGTCTAATTGGCCTGATGGGAGGCTTCATGTACGCTTATCAGAACTCGGCGGGTCGGCTTATGGGATTCTTCCCCAATGAAGGCGAGGTAGCTCGTTATAAGAAATAA

Protein sequence

MNTDITASTKPEYPVIDRNPPFTKVVGNFDTLDYLRFVTITGVSVSVGYLSGIKPGIRGPSMVTGGLIGLMGGFMYAYQNSAGRLMGFFPNEGEVARYKK

Homology

[Close]

BLAST of HG10021625 vs. NCBI nr
Match: XP_022142552.1 (NADH-ubiquinone oxidoreductase 20.9 kDa subunit [Momordica charantia] >XP_022925305.1 NADH-ubiquinone oxidoreductase 20.9 kDa subunit-like [Cucurbita moschata] >XP_022966760.1 NADH-ubiquinone oxidoreductase 20.9 kDa subunit-like [Cucurbita maxima] >XP_023001508.1 NADH-ubiquinone oxidoreductase 20.9 kDa subunit-like [Cucurbita maxima] >XP_023541604.1 NADH-ubiquinone oxidoreductase 20.9 kDa subunit-like [Cucurbita pepo subsp. pepo] >KAG6573532.1 hypothetical protein SDJN03_27419, partial [Cucurbita argyrosperma subsp. sororia] >KAG7012647.1 hypothetical protein SDJN02_25399 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 203.8 bits (517), Expect = 7.2e-49
Identity = 99/100 (99.00%), Postives = 100/100 (100.00%), Query Frame = 0


Query: 1   MNTDITASTKPEYPVIDRNPPFTKVVGNFDTLDYLRFVTITGVSVSVGYLSGIKPGIRGP 60
           MNTDITASTKPEYPVIDRNPPFTKVVGNFDTLDYLRFVTITGVSV+VGYLSGIKPGIRGP
Sbjct: 1   MNTDITASTKPEYPVIDRNPPFTKVVGNFDTLDYLRFVTITGVSVTVGYLSGIKPGIRGP 60

Query: 61  SMVTGGLIGLMGGFMYAYQNSAGRLMGFFPNEGEVARYKK 101
           SMVTGGLIGLMGGFMYAYQNSAGRLMGFFPNEGEVARYKK
Sbjct: 61  SMVTGGLIGLMGGFMYAYQNSAGRLMGFFPNEGEVARYKK 100

[Close]

BLAST of HG10021625 vs. NCBI nr
Match: XP_022927362.1 (NADH-ubiquinone oxidoreductase 20.9 kDa subunit-like [Cucurbita moschata] >XP_023520383.1 NADH-ubiquinone oxidoreductase 20.9 kDa subunit-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 203.0 bits (515), Expect = 1.2e-48
Identity = 98/100 (98.00%), Postives = 100/100 (100.00%), Query Frame = 0


Query: 1   MNTDITASTKPEYPVIDRNPPFTKVVGNFDTLDYLRFVTITGVSVSVGYLSGIKPGIRGP 60
           MNTDITASTKPEYPVIDRNPPFTKVVGNFDTLDYLRFVTITGVSV+VGYLSGIKPGIRGP
Sbjct: 1   MNTDITASTKPEYPVIDRNPPFTKVVGNFDTLDYLRFVTITGVSVTVGYLSGIKPGIRGP 60

Query: 61  SMVTGGLIGLMGGFMYAYQNSAGRLMGFFPNEGEVARYKK 101
           SMVTGGLIGLMGGFMYAYQNSAGR+MGFFPNEGEVARYKK
Sbjct: 61  SMVTGGLIGLMGGFMYAYQNSAGRIMGFFPNEGEVARYKK 100

[Close]

BLAST of HG10021625 vs. NCBI nr
Match: XP_008463609.1 (PREDICTED: NADH-ubiquinone oxidoreductase 20.9 kDa subunit [Cucumis melo] >XP_038894012.1 NADH-ubiquinone oxidoreductase 20.9 kDa subunit [Benincasa hispida])

HSP 1 Score: 202.6 bits (514), Expect = 1.6e-48
Identity = 98/100 (98.00%), Postives = 100/100 (100.00%), Query Frame = 0


Query: 1   MNTDITASTKPEYPVIDRNPPFTKVVGNFDTLDYLRFVTITGVSVSVGYLSGIKPGIRGP 60
           MNTDITASTKPEYPVIDRNPPFTKVVGNFDTLDYLRFVTITGVSV+VGYLSGIKPGIRGP
Sbjct: 1   MNTDITASTKPEYPVIDRNPPFTKVVGNFDTLDYLRFVTITGVSVTVGYLSGIKPGIRGP 60

Query: 61  SMVTGGLIGLMGGFMYAYQNSAGRLMGFFPNEGEVARYKK 101
           SMVTGGLIGLMGGFMYAYQNSAGRLMGFFPN+GEVARYKK
Sbjct: 61  SMVTGGLIGLMGGFMYAYQNSAGRLMGFFPNDGEVARYKK 100

[Close]

BLAST of HG10021625 vs. NCBI nr
Match: XP_011654950.1 (NADH-ubiquinone oxidoreductase 20.9 kDa subunit [Cucumis sativus] >XP_031745943.1 NADH-ubiquinone oxidoreductase 20.9 kDa subunit-like [Cucumis sativus])

HSP 1 Score: 202.2 bits (513), Expect = 2.1e-48
Identity = 97/100 (97.00%), Postives = 100/100 (100.00%), Query Frame = 0


Query: 1   MNTDITASTKPEYPVIDRNPPFTKVVGNFDTLDYLRFVTITGVSVSVGYLSGIKPGIRGP 60
           MNTDITASTKPEYPV+DRNPPFTKVVGNFDTLDYLRFVTITGVSV+VGYLSGIKPGIRGP
Sbjct: 1   MNTDITASTKPEYPVVDRNPPFTKVVGNFDTLDYLRFVTITGVSVTVGYLSGIKPGIRGP 60

Query: 61  SMVTGGLIGLMGGFMYAYQNSAGRLMGFFPNEGEVARYKK 101
           SMVTGGLIGLMGGFMYAYQNSAGRLMGFFPN+GEVARYKK
Sbjct: 61  SMVTGGLIGLMGGFMYAYQNSAGRLMGFFPNDGEVARYKK 100

[Close]

BLAST of HG10021625 vs. NCBI nr
Match: KAG7019380.1 (hypothetical protein SDJN02_18341 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 200.3 bits (508), Expect = 7.9e-48
Identity = 97/100 (97.00%), Postives = 99/100 (99.00%), Query Frame = 0


Query: 1   MNTDITASTKPEYPVIDRNPPFTKVVGNFDTLDYLRFVTITGVSVSVGYLSGIKPGIRGP 60
           MNTDITASTKPEYPVIDRNPPFTKVVGNFDTLDYLRFVTITGVSV+VGYLSGIKPGIRGP
Sbjct: 1   MNTDITASTKPEYPVIDRNPPFTKVVGNFDTLDYLRFVTITGVSVTVGYLSGIKPGIRGP 60

Query: 61  SMVTGGLIGLMGGFMYAYQNSAGRLMGFFPNEGEVARYKK 101
           SMVTGGLIGLMGGFMYAYQNSAGR+MGFFPNE EVARYKK
Sbjct: 61  SMVTGGLIGLMGGFMYAYQNSAGRIMGFFPNEDEVARYKK 100

[Close]

BLAST of HG10021625 vs. ExPASy TrEMBL
Match: A0A6J1HSH8 (NADH-ubiquinone oxidoreductase 20.9 kDa subunit-like OS=Cucurbita maxima OX=3661 GN=LOC111466374 PE=4 SV=1)

HSP 1 Score: 203.8 bits (517), Expect = 3.5e-49
Identity = 99/100 (99.00%), Postives = 100/100 (100.00%), Query Frame = 0


Query: 1   MNTDITASTKPEYPVIDRNPPFTKVVGNFDTLDYLRFVTITGVSVSVGYLSGIKPGIRGP 60
           MNTDITASTKPEYPVIDRNPPFTKVVGNFDTLDYLRFVTITGVSV+VGYLSGIKPGIRGP
Sbjct: 1   MNTDITASTKPEYPVIDRNPPFTKVVGNFDTLDYLRFVTITGVSVTVGYLSGIKPGIRGP 60

Query: 61  SMVTGGLIGLMGGFMYAYQNSAGRLMGFFPNEGEVARYKK 101
           SMVTGGLIGLMGGFMYAYQNSAGRLMGFFPNEGEVARYKK
Sbjct: 61  SMVTGGLIGLMGGFMYAYQNSAGRLMGFFPNEGEVARYKK 100

[Close]

BLAST of HG10021625 vs. ExPASy TrEMBL
Match: A0A6J1CN33 (NADH-ubiquinone oxidoreductase 20.9 kDa subunit OS=Momordica charantia OX=3673 GN=LOC111012637 PE=4 SV=1)

HSP 1 Score: 203.8 bits (517), Expect = 3.5e-49
Identity = 99/100 (99.00%), Postives = 100/100 (100.00%), Query Frame = 0


Query: 1   MNTDITASTKPEYPVIDRNPPFTKVVGNFDTLDYLRFVTITGVSVSVGYLSGIKPGIRGP 60
           MNTDITASTKPEYPVIDRNPPFTKVVGNFDTLDYLRFVTITGVSV+VGYLSGIKPGIRGP
Sbjct: 1   MNTDITASTKPEYPVIDRNPPFTKVVGNFDTLDYLRFVTITGVSVTVGYLSGIKPGIRGP 60

Query: 61  SMVTGGLIGLMGGFMYAYQNSAGRLMGFFPNEGEVARYKK 101
           SMVTGGLIGLMGGFMYAYQNSAGRLMGFFPNEGEVARYKK
Sbjct: 61  SMVTGGLIGLMGGFMYAYQNSAGRLMGFFPNEGEVARYKK 100

[Close]

BLAST of HG10021625 vs. ExPASy TrEMBL
Match: A0A6J1EHK1 (NADH-ubiquinone oxidoreductase 20.9 kDa subunit-like OS=Cucurbita moschata OX=3662 GN=LOC111432598 PE=4 SV=1)

HSP 1 Score: 203.8 bits (517), Expect = 3.5e-49
Identity = 99/100 (99.00%), Postives = 100/100 (100.00%), Query Frame = 0


Query: 1   MNTDITASTKPEYPVIDRNPPFTKVVGNFDTLDYLRFVTITGVSVSVGYLSGIKPGIRGP 60
           MNTDITASTKPEYPVIDRNPPFTKVVGNFDTLDYLRFVTITGVSV+VGYLSGIKPGIRGP
Sbjct: 1   MNTDITASTKPEYPVIDRNPPFTKVVGNFDTLDYLRFVTITGVSVTVGYLSGIKPGIRGP 60

Query: 61  SMVTGGLIGLMGGFMYAYQNSAGRLMGFFPNEGEVARYKK 101
           SMVTGGLIGLMGGFMYAYQNSAGRLMGFFPNEGEVARYKK
Sbjct: 61  SMVTGGLIGLMGGFMYAYQNSAGRLMGFFPNEGEVARYKK 100

[Close]

BLAST of HG10021625 vs. ExPASy TrEMBL
Match: A0A6J1EGY7 (NADH-ubiquinone oxidoreductase 20.9 kDa subunit-like OS=Cucurbita moschata OX=3662 GN=LOC111434210 PE=4 SV=1)

HSP 1 Score: 203.0 bits (515), Expect = 5.9e-49
Identity = 98/100 (98.00%), Postives = 100/100 (100.00%), Query Frame = 0


Query: 1   MNTDITASTKPEYPVIDRNPPFTKVVGNFDTLDYLRFVTITGVSVSVGYLSGIKPGIRGP 60
           MNTDITASTKPEYPVIDRNPPFTKVVGNFDTLDYLRFVTITGVSV+VGYLSGIKPGIRGP
Sbjct: 1   MNTDITASTKPEYPVIDRNPPFTKVVGNFDTLDYLRFVTITGVSVTVGYLSGIKPGIRGP 60

Query: 61  SMVTGGLIGLMGGFMYAYQNSAGRLMGFFPNEGEVARYKK 101
           SMVTGGLIGLMGGFMYAYQNSAGR+MGFFPNEGEVARYKK
Sbjct: 61  SMVTGGLIGLMGGFMYAYQNSAGRIMGFFPNEGEVARYKK 100

[Close]

BLAST of HG10021625 vs. ExPASy TrEMBL
Match: A0A1S3CJL9 (NADH-ubiquinone oxidoreductase 20.9 kDa subunit OS=Cucumis melo OX=3656 GN=LOC103501718 PE=4 SV=1)

HSP 1 Score: 202.6 bits (514), Expect = 7.7e-49
Identity = 98/100 (98.00%), Postives = 100/100 (100.00%), Query Frame = 0


Query: 1   MNTDITASTKPEYPVIDRNPPFTKVVGNFDTLDYLRFVTITGVSVSVGYLSGIKPGIRGP 60
           MNTDITASTKPEYPVIDRNPPFTKVVGNFDTLDYLRFVTITGVSV+VGYLSGIKPGIRGP
Sbjct: 1   MNTDITASTKPEYPVIDRNPPFTKVVGNFDTLDYLRFVTITGVSVTVGYLSGIKPGIRGP 60

Query: 61  SMVTGGLIGLMGGFMYAYQNSAGRLMGFFPNEGEVARYKK 101
           SMVTGGLIGLMGGFMYAYQNSAGRLMGFFPN+GEVARYKK
Sbjct: 61  SMVTGGLIGLMGGFMYAYQNSAGRLMGFFPNDGEVARYKK 100

[Close]

BLAST of HG10021625 vs. TAIR 10
Match: AT4G16450.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: photorespiration; LOCATED IN: mitochondrion, mitochondrial membrane, mitochondrial respiratory chain complex I, respiratory chain complex I, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 180.3 bits (456), Expect = 7.9e-46
Identity = 86/100 (86.00%), Postives = 93/100 (93.00%), Query Frame = 0


Query: 1   MNTDITASTKPEYPVIDRNPPFTKVVGNFDTLDYLRFVTITGVSVSVGYLSGIKPGIRGP 60
           MNTDITA  K +YPV+DRNP FTKVVGNF TLDYLRF TITG+SV+VGYLSGIKPGI+GP
Sbjct: 1   MNTDITALEKAQYPVVDRNPAFTKVVGNFSTLDYLRFSTITGISVTVGYLSGIKPGIKGP 60

Query: 61  SMVTGGLIGLMGGFMYAYQNSAGRLMGFFPNEGEVARYKK 101
           SMVTGGLIGLMGGFMYAYQNSAGRLMGFFPN+GEVA Y+K
Sbjct: 61  SMVTGGLIGLMGGFMYAYQNSAGRLMGFFPNDGEVASYQK 100

[Close]

BLAST of HG10021625 vs. TAIR 10
Match: AT4G16450.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: photorespiration; LOCATED IN: mitochondrion, mitochondrial membrane, mitochondrial respiratory chain complex I, respiratory chain complex I; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages. )

HSP 1 Score: 180.3 bits (456), Expect = 7.9e-46
Identity = 86/100 (86.00%), Postives = 93/100 (93.00%), Query Frame = 0


Query: 1   MNTDITASTKPEYPVIDRNPPFTKVVGNFDTLDYLRFVTITGVSVSVGYLSGIKPGIRGP 60
           MNTDITA  K +YPV+DRNP FTKVVGNF TLDYLRF TITG+SV+VGYLSGIKPGI+GP
Sbjct: 1   MNTDITALEKAQYPVVDRNPAFTKVVGNFSTLDYLRFSTITGISVTVGYLSGIKPGIKGP 60

Query: 61  SMVTGGLIGLMGGFMYAYQNSAGRLMGFFPNEGEVARYKK 101
           SMVTGGLIGLMGGFMYAYQNSAGRLMGFFPN+GEVA Y+K
Sbjct: 61  SMVTGGLIGLMGGFMYAYQNSAGRLMGFFPNDGEVASYQK 100

The following BLAST results are available for this feature:

BLAST of HG10021625 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022142552.1	7.2e-49	99.00	NADH-ubiquinone oxidoreductase 20.9 kDa subunit [Momordica charantia] >XP_022925...	[more]
XP_022927362.1	1.2e-48	98.00	NADH-ubiquinone oxidoreductase 20.9 kDa subunit-like [Cucurbita moschata] >XP_02...	[more]
XP_008463609.1	1.6e-48	98.00	PREDICTED: NADH-ubiquinone oxidoreductase 20.9 kDa subunit [Cucumis melo] >XP_03...	[more]
XP_011654950.1	2.1e-48	97.00	NADH-ubiquinone oxidoreductase 20.9 kDa subunit [Cucumis sativus] >XP_031745943....	[more]
KAG7019380.1	7.9e-48	97.00	hypothetical protein SDJN02_18341 [Cucurbita argyrosperma subsp. argyrosperma]	[more]

BLAST of HG10021625 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of HG10021625 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HSH8	3.5e-49	99.00	NADH-ubiquinone oxidoreductase 20.9 kDa subunit-like OS=Cucurbita maxima OX=3661...	[more]
A0A6J1CN33	3.5e-49	99.00	NADH-ubiquinone oxidoreductase 20.9 kDa subunit OS=Momordica charantia OX=3673 G...	[more]
A0A6J1EHK1	3.5e-49	99.00	NADH-ubiquinone oxidoreductase 20.9 kDa subunit-like OS=Cucurbita moschata OX=36...	[more]
A0A6J1EGY7	5.9e-49	98.00	NADH-ubiquinone oxidoreductase 20.9 kDa subunit-like OS=Cucurbita moschata OX=36...	[more]
A0A1S3CJL9	7.7e-49	98.00	NADH-ubiquinone oxidoreductase 20.9 kDa subunit OS=Cucumis melo OX=3656 GN=LOC10...	[more]

BLAST of HG10021625 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G16450.1	7.9e-46	86.00	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: photores...	[more]
AT4G16450.2	7.9e-46	86.00	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: photores...	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR019721	NADH-ubiquinone oxidoreductase, 21kDa subunit, N-terminal	PFAM	PF10785	NADH-u_ox-rdase	coord: 11..89 e-value: 7.1E-21 score: 74.7
None	No IPR available	PANTHER	PTHR34062	OXIDOREDUCTASE 21 KDA SUBUNIT, PUTATIVE (AFU_ORTHOLOGUE AFUA_4G04750)-RELATED	coord: 1..99
None	No IPR available	PANTHER	PTHR34062:SF2	NADH-UBIQUINONE OXIDOREDUCTASE 20.9 KDA SUBUNIT-LIKE	coord: 1..99

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10021625.1	HG10021625.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005747	mitochondrial respiratory chain complex I