HG10021623 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10021623
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	heterogeneous nuclear ribonucleoprotein 1
Location	Chr05: 12685778 .. 12688406 (-)
RNA-Seq Expression	HG10021623
Synteny	HG10021623

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATCCTGGCAAGCTTTTCATTGGTGGTATTTCGTGGGACACGGATGAAGATCGTCTTCGAGAGTATTTTCAGAGCTTTGGAGAAGTGGTGGAGGTGATGATCATGAGGGATCGGACCACCGGCCGTGCCCGTGGCTTTGGTTTCGTCGTCTTTGCTGACCCTGTTGTTGCAGCAAGAGTTGTATTGGAAAAGCATGTAATTGATGGAAGAACTGTAAGTCTTGTGTATTCATCTTGATTCTCATTGATTTTTCCACCTGTATTGGAAGTTTTAGATGTCTTTTATGGAATGTTCCAGTGTGTGTTCTGATTTGATTTTGTGAATGAATATGCTCGTGCCGCGATCAAGGTTTTCCCGATGTTCTTTGGTGTTCATCATGATTCAAACTTATTAGAATTCTTCAGCATTTGTATCCTAAATCTCTTTTACCTTGGGAAACTAATAATTTTCCTTTGGAGCATGAATGGGAAGATTTGGCTGTTCGCATTTTATTAGGACAAGTTCTGTTTCATCTGAAATGAAGTTCATGTTTCTGTGGAAGTATGATGCCAATGTATGTGCTTGGAATGTCAATTGTTTTTTAGAATCAATAGCTTAGATAACATGCTCTTCAAAAGGTAATATGCATGATGGCAGTTAAAGCATTTATTTGTGGAAGAAAAAGTTTAAGGCTACTTCTAGAATTAGTTTGATAATGAGCAATTATGGAAAATCTGTTGGGATCATTTAAGGGGGCTAAGAAGAACACAGTTAAGAATTTGCTTCTTGGCTTTATTAGAAAGTTTGAATATCTAAAGATGGTGGTAGAGAGATCCTAAAGCTATTGTAATTGTTAAATGAAGTGAGTGGTTGGCCTAATTTTTGTTGTTAGAAGCCACATTTTTTGTTTGGTTGTCTGCAAGCAGTTAGGATGTCTTACAATTAATTACATCTGTATCCTGTGAGCTGTGACTGGCTATATGCACAAACATATATATGTCAAATCAACACCGTGAGAGGACCTTGGTCCTTGGATAAATATGCAAATTTTCATATGTAGAAAGAAATCTATCATAATATTCCTTTGTAGTCCTCAATGTGAAACCATGATTTGTGAAAATTAGGAGGCTTGTTATCTTCTTGAGTTTGTCATGGACATTAGGTTTTATGTGTGATGGCCATCTCTTGTATTAAAAGGATACGTTTTGTTGCCTCCAGACTTGTATTGGTAATGAGAGTAAATTCTATCATTTTCATGTTTTGATGTTCATTTTCTTTCTTTCAGGTTGAAGCAAAGAAGGCTGTTCCTCGAGATGATCAAAACATTTTGAGCAGGAACAATACTGGTATCCTTGGGTCACCTGGTCCTACTCGCACCAAGAAGATATTTGTTGGAGGATTGGCATCAACTGTTACAGAGAGCGACTTCAAAAAGTATTTTGATCAGTTTGGAACAATCGTAGATGTCGTTGTGATGTATGATCATAATACTCAGAGACCAAGAGGTTTTGGATTTATCACTTACGAGTCAGAGGAATCGGTGGAGAAAGTGTTATACAAAACTTTTCATGAACTCAATGGTAAAATGGTTGAGGTTAAGAGGGCTGTTCCAAAGGAATCATCACCAGTGCCAAATCGAAATCAATTAGGTGGATACCCTTACAGTTTTGGTAGAGTTGGTAGCTATTTAAATGGCTATAATCAAGGATATAATCCAACCTCAGTTGGGGGATATGGATTGAGATCTGATGGTAGATTTAGTCCTGTTACAGTCGGTCGGAGTGGACTCTCTCCAATTAGTCCTGGTTATGGAATAGGGCTAAATCTTGATACAGGGTTGAACCCGAACTATGGAACAGGTCCCAATGTTAGCTCTAACCTCAGCTATGGACGGGTAATGAGCCCCTCATATGGTGGAAATTTAAATAGGTACGGTAGCCCAAACCCCATGGTATACGGTGGTGGTGGTGGAGGTAATGGTTCTATTTTAAGCTCATCGGTTCAGAATCTGTGGGGAAATGTCGGTAACTCGGCTGGTACAAACTCCTCACACTTGAGGACTTTTCCTGGCTCTGGTGGTGTGCATACAGGAACTAATTCATTGAACAGTATCGGAGGGCTTTGGGGTGCTTCTGTGAGTCTAGGTCATGGGGAAAATGCTGGTTCTCCATTCAATACTGCTAATCTCGACTTTGGAAGTGGAGATGCCAGCTTTACATCAGGAACAACTGTAGGTTATGCTAGAAGCATTGGAACTAATGTTTCCTCAGCATCTTTGTACTCTGCACCAAATATTTATGATGAGGTTCATGGGAATAATGATGAAGGAAACACATTTTATGGGCATTCCAGTTGGCAGTTGTTGCCAACAGAGCTTGAGGATTCTTCCTCAATTGGTTTTGGCCTTGGCAATGCAGCTTCAGATGTTATTAGTAGAAACAATGCTGGTTATACTGTGGGTTATGGTGTTTCTAATAGACAATCTAATAGAGGTGAGTCTTTCTACTTCAAAGAAAACTTTGAATATTTTCAAGTTTTTCTTTCTTCTACCGTTGTTACTTCTCTAGAAACTTTAGACATTCAAGCTTTTATCACTCTAATCATTATAAAAACTCAAGTTTTACAACCTTACTTGAACAAGATCTGA

mRNA sequence

ATGGATCCTGGCAAGCTTTTCATTGGTGGTATTTCGTGGGACACGGATGAAGATCGTCTTCGAGAGTATTTTCAGAGCTTTGGAGAAGTGGTGGAGGTGATGATCATGAGGGATCGGACCACCGGCCGTGCCCGTGGCTTTGGTTTCGTCGTCTTTGCTGACCCTGTTGTTGCAGCAAGAGTTGTATTGGAAAAGCATGTAATTGATGGAAGAACTGTTGAAGCAAAGAAGGCTGTTCCTCGAGATGATCAAAACATTTTGAGCAGGAACAATACTGGTATCCTTGGGTCACCTGGTCCTACTCGCACCAAGAAGATATTTGTTGGAGGATTGGCATCAACTGTTACAGAGAGCGACTTCAAAAAGTATTTTGATCAGTTTGGAACAATCGTAGATGTCGTTGTGATGTATGATCATAATACTCAGAGACCAAGAGGTTTTGGATTTATCACTTACGAGTCAGAGGAATCGGTGGAGAAAGTGTTATACAAAACTTTTCATGAACTCAATGGTAAAATGGTTGAGGTTAAGAGGGCTGTTCCAAAGGAATCATCACCAGTGCCAAATCGAAATCAATTAGGTGGATACCCTTACAGTTTTGGTAGAGTTGGTAGCTATTTAAATGGCTATAATCAAGGATATAATCCAACCTCAGTTGGGGGATATGGATTGAGATCTGATGGTAGATTTAGTCCTGTTACAGTCGGTCGGAGTGGACTCTCTCCAATTAGTCCTGGTTATGGAATAGGGCTAAATCTTGATACAGGGTTGAACCCGAACTATGGAACAGGTCCCAATGTTAGCTCTAACCTCAGCTATGGACGGGTAATGAGCCCCTCATATGGTGGAAATTTAAATAGGTACGGTAGCCCAAACCCCATGGTATACGGTGGTGGTGGTGGAGGTAATGGTTCTATTTTAAGCTCATCGGTTCAGAATCTGTGGGGAAATGTCGGTAACTCGGCTGGTACAAACTCCTCACACTTGAGGACTTTTCCTGGCTCTGGTGGTGTGCATACAGGAACTAATTCATTGAACAGTATCGGAGGGCTTTGGGGTGCTTCTGTGAGTCTAGGTCATGGGGAAAATGCTGGTTCTCCATTCAATACTGCTAATCTCGACTTTGGAAGTGGAGATGCCAGCTTTACATCAGGAACAACTGTAGGTTATGCTAGAAGCATTGGAACTAATGTTTCCTCAGCATCTTTGTACTCTGCACCAAATATTTATGATGAGGTTCATGGGAATAATGATGAAGGAAACACATTTTATGGGCATTCCAGTTGGCAGTTGTTGCCAACAGAGCTTGAGGATTCTTCCTCAATTGGTTTTGGCCTTGGCAATGCAGCTTCAGATGTTATTAGTAGAAACAATGCTGGTTATACTGTGGGTTATGGTGTTTCTAATAGACAATCTAATAGAGGTGAGTCTTTCTACTTCAAAGAAAACTTTGAATATTTTCAAGTTTTTCTTTCTTCTACCGTTGTTACTTCTCTAGAAACTTTAGACATTCAAGCTTTTATCACTCTAATCATTATAAAAACTCAAGTTTTACAACCTTACTTGAACAAGATCTGA

Coding sequence (CDS)

ATGGATCCTGGCAAGCTTTTCATTGGTGGTATTTCGTGGGACACGGATGAAGATCGTCTTCGAGAGTATTTTCAGAGCTTTGGAGAAGTGGTGGAGGTGATGATCATGAGGGATCGGACCACCGGCCGTGCCCGTGGCTTTGGTTTCGTCGTCTTTGCTGACCCTGTTGTTGCAGCAAGAGTTGTATTGGAAAAGCATGTAATTGATGGAAGAACTGTTGAAGCAAAGAAGGCTGTTCCTCGAGATGATCAAAACATTTTGAGCAGGAACAATACTGGTATCCTTGGGTCACCTGGTCCTACTCGCACCAAGAAGATATTTGTTGGAGGATTGGCATCAACTGTTACAGAGAGCGACTTCAAAAAGTATTTTGATCAGTTTGGAACAATCGTAGATGTCGTTGTGATGTATGATCATAATACTCAGAGACCAAGAGGTTTTGGATTTATCACTTACGAGTCAGAGGAATCGGTGGAGAAAGTGTTATACAAAACTTTTCATGAACTCAATGGTAAAATGGTTGAGGTTAAGAGGGCTGTTCCAAAGGAATCATCACCAGTGCCAAATCGAAATCAATTAGGTGGATACCCTTACAGTTTTGGTAGAGTTGGTAGCTATTTAAATGGCTATAATCAAGGATATAATCCAACCTCAGTTGGGGGATATGGATTGAGATCTGATGGTAGATTTAGTCCTGTTACAGTCGGTCGGAGTGGACTCTCTCCAATTAGTCCTGGTTATGGAATAGGGCTAAATCTTGATACAGGGTTGAACCCGAACTATGGAACAGGTCCCAATGTTAGCTCTAACCTCAGCTATGGACGGGTAATGAGCCCCTCATATGGTGGAAATTTAAATAGGTACGGTAGCCCAAACCCCATGGTATACGGTGGTGGTGGTGGAGGTAATGGTTCTATTTTAAGCTCATCGGTTCAGAATCTGTGGGGAAATGTCGGTAACTCGGCTGGTACAAACTCCTCACACTTGAGGACTTTTCCTGGCTCTGGTGGTGTGCATACAGGAACTAATTCATTGAACAGTATCGGAGGGCTTTGGGGTGCTTCTGTGAGTCTAGGTCATGGGGAAAATGCTGGTTCTCCATTCAATACTGCTAATCTCGACTTTGGAAGTGGAGATGCCAGCTTTACATCAGGAACAACTGTAGGTTATGCTAGAAGCATTGGAACTAATGTTTCCTCAGCATCTTTGTACTCTGCACCAAATATTTATGATGAGGTTCATGGGAATAATGATGAAGGAAACACATTTTATGGGCATTCCAGTTGGCAGTTGTTGCCAACAGAGCTTGAGGATTCTTCCTCAATTGGTTTTGGCCTTGGCAATGCAGCTTCAGATGTTATTAGTAGAAACAATGCTGGTTATACTGTGGGTTATGGTGTTTCTAATAGACAATCTAATAGAGGTGAGTCTTTCTACTTCAAAGAAAACTTTGAATATTTTCAAGTTTTTCTTTCTTCTACCGTTGTTACTTCTCTAGAAACTTTAGACATTCAAGCTTTTATCACTCTAATCATTATAAAAACTCAAGTTTTACAACCTTACTTGAACAAGATCTGA

Protein sequence

MDPGKLFIGGISWDTDEDRLREYFQSFGEVVEVMIMRDRTTGRARGFGFVVFADPVVAARVVLEKHVIDGRTVEAKKAVPRDDQNILSRNNTGILGSPGPTRTKKIFVGGLASTVTESDFKKYFDQFGTIVDVVVMYDHNTQRPRGFGFITYESEESVEKVLYKTFHELNGKMVEVKRAVPKESSPVPNRNQLGGYPYSFGRVGSYLNGYNQGYNPTSVGGYGLRSDGRFSPVTVGRSGLSPISPGYGIGLNLDTGLNPNYGTGPNVSSNLSYGRVMSPSYGGNLNRYGSPNPMVYGGGGGGNGSILSSSVQNLWGNVGNSAGTNSSHLRTFPGSGGVHTGTNSLNSIGGLWGASVSLGHGENAGSPFNTANLDFGSGDASFTSGTTVGYARSIGTNVSSASLYSAPNIYDEVHGNNDEGNTFYGHSSWQLLPTELEDSSSIGFGLGNAASDVISRNNAGYTVGYGVSNRQSNRGESFYFKENFEYFQVFLSSTVVTSLETLDIQAFITLIIIKTQVLQPYLNKI

Homology

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BLAST of HG10021623 vs. NCBI nr
Match: XP_038894700.1 (heterogeneous nuclear ribonucleoprotein 1 [Benincasa hispida] >XP_038894701.1 heterogeneous nuclear ribonucleoprotein 1 [Benincasa hispida])

HSP 1 Score: 930.6 bits (2404), Expect = 5.8e-267
Identity = 468/475 (98.53%), Postives = 469/475 (98.74%), Query Frame = 0


Query: 1   MDPGKLFIGGISWDTDEDRLREYFQSFGEVVEVMIMRDRTTGRARGFGFVVFADPVVAAR 60
           MDPGKLFIGGISWDTDEDRLREYFQSFGEVVEVMIMRDRTTGRARGFGFVVFADPVVAAR
Sbjct: 1   MDPGKLFIGGISWDTDEDRLREYFQSFGEVVEVMIMRDRTTGRARGFGFVVFADPVVAAR 60

Query: 61  VVLEKHVIDGRTVEAKKAVPRDDQNILSRNNTGILGSPGPTRTKKIFVGGLASTVTESDF 120
           VVLEKHVIDGRTVEAKKAVPRDDQNILSRNNTGILGSPGPTRTKKIFVGGLASTVTESDF
Sbjct: 61  VVLEKHVIDGRTVEAKKAVPRDDQNILSRNNTGILGSPGPTRTKKIFVGGLASTVTESDF 120

Query: 121 KKYFDQFGTIVDVVVMYDHNTQRPRGFGFITYESEESVEKVLYKTFHELNGKMVEVKRAV 180
           KKYFDQFGTIVDVVVMYDHNTQRPRGFGFITYESEESVEKVLYKTFHELNGKMVEVKRAV
Sbjct: 121 KKYFDQFGTIVDVVVMYDHNTQRPRGFGFITYESEESVEKVLYKTFHELNGKMVEVKRAV 180

Query: 181 PKESSPVPNRNQLGGYPYSFGRVGSYLNGYNQGYNPTSVGGYGLRSDGRFSPVTVGRSGL 240
           PKESSPVPNRNQLGGYPY+FGRVGSYLNGYNQGYNPTSVGGYGLRSDGRFSPVTVGR GL
Sbjct: 181 PKESSPVPNRNQLGGYPYNFGRVGSYLNGYNQGYNPTSVGGYGLRSDGRFSPVTVGRGGL 240

Query: 241 SPISPGYGIGLNLDTGLNPNYGTGPNVSSNLSYGRVMSPSYGGNLNRYGSPNPMVYGGGG 300
           SPISPGYGIGLNLDTGLNPNYGTGPNV SNLSYGRVMSPSYGGNLNRYGSPNPMVYGGG 
Sbjct: 241 SPISPGYGIGLNLDTGLNPNYGTGPNVGSNLSYGRVMSPSYGGNLNRYGSPNPMVYGGGS 300

Query: 301 GGNGSILSSSVQNLWGNVGNSAGTNSSHLRTFPGSGGVHTGTNSLNSIGGLWGASVSLGH 360
           GGNGSILSSSVQNLWGNVGNSAGTN SHLRTFPGSGGVHTGTNSLNSIGGLWGAS SLGH
Sbjct: 301 GGNGSILSSSVQNLWGNVGNSAGTNPSHLRTFPGSGGVHTGTNSLNSIGGLWGASASLGH 360

Query: 361 GENAGSPFNTANLDFGSGDASFTSGTTVGYARSIGTNVSSASLYSAPNIYDEVHGNNDEG 420
           GENAGSPFNTANLDFGSGDASFTSGTTVGYARSIGTNVSSASLYSAPNIYDEVHGNNDEG
Sbjct: 361 GENAGSPFNTANLDFGSGDASFTSGTTVGYARSIGTNVSSASLYSAPNIYDEVHGNNDEG 420

Query: 421 NTFYGHSSWQLLPTELEDSSSIGFGLGNAASDVISRNNAGYTVGYGVSNRQSNRG 476
           NTFYGHSSWQ LPTELEDSSSIGFGLGNAASDVISRNNAGYTVGYGVSNRQSNRG
Sbjct: 421 NTFYGHSSWQSLPTELEDSSSIGFGLGNAASDVISRNNAGYTVGYGVSNRQSNRG 475

[Close]

BLAST of HG10021623 vs. NCBI nr
Match: XP_008463611.1 (PREDICTED: heterogeneous nuclear ribonucleoprotein 1 [Cucumis melo])

HSP 1 Score: 911.4 bits (2354), Expect = 3.7e-261
Identity = 458/475 (96.42%), Postives = 465/475 (97.89%), Query Frame = 0


Query: 1   MDPGKLFIGGISWDTDEDRLREYFQSFGEVVEVMIMRDRTTGRARGFGFVVFADPVVAAR 60
           MDPGKLFIGGISWDTDEDRLREYF++FGEVVEVMIMRDRTTGRARGFGFVVFADPV AAR
Sbjct: 1   MDPGKLFIGGISWDTDEDRLREYFRNFGEVVEVMIMRDRTTGRARGFGFVVFADPVAAAR 60

Query: 61  VVLEKHVIDGRTVEAKKAVPRDDQNILSRNNTGILGSPGPTRTKKIFVGGLASTVTESDF 120
           VVLEKHVIDGRTVEAKKAVPRDDQNILSRNNTGILGSPGPTRTKKIFVGGLASTVTESDF
Sbjct: 61  VVLEKHVIDGRTVEAKKAVPRDDQNILSRNNTGILGSPGPTRTKKIFVGGLASTVTESDF 120

Query: 121 KKYFDQFGTIVDVVVMYDHNTQRPRGFGFITYESEESVEKVLYKTFHELNGKMVEVKRAV 180
           KKYFDQFGTIVDVVVMYDHNTQRPRGFGFITYESEESVEKVLYKTFHELNGKMVEVKRAV
Sbjct: 121 KKYFDQFGTIVDVVVMYDHNTQRPRGFGFITYESEESVEKVLYKTFHELNGKMVEVKRAV 180

Query: 181 PKESSPVPNRNQLGGYPYSFGRVGSYLNGYNQGYNPTSVGGYGLRSDGRFSPVTVGRSGL 240
           PKESSPVPNRNQL GYPY+FGRVGSYLNGYNQGYNPTSVGGYGLRSDGRFSPVTVGR GL
Sbjct: 181 PKESSPVPNRNQLAGYPYNFGRVGSYLNGYNQGYNPTSVGGYGLRSDGRFSPVTVGRGGL 240

Query: 241 SPISPGYGIGLNLDTGLNPNYGTGPNVSSNLSYGRVMSPSYGGNLNRYGSPNPMVYGGGG 300
           SPISPGYG+G+NLDTGLNPNYGTGP  SSNLSYGRVMSPSYGGNLNRYGSPNPMVYGGGG
Sbjct: 241 SPISPGYGMGINLDTGLNPNYGTGP--SSNLSYGRVMSPSYGGNLNRYGSPNPMVYGGGG 300

Query: 301 GGNGSILSSSVQNLWGNVGNSAGTNSSHLRTFPGSGGVHTGTNSLNSIGGLWGASVSLGH 360
           GGNGSILSSSVQNLWGNV NSAGTNSSHLRTFPGSGGVHTGTNSLN+IGGLWG S SLGH
Sbjct: 301 GGNGSILSSSVQNLWGNVSNSAGTNSSHLRTFPGSGGVHTGTNSLNNIGGLWGTSASLGH 360

Query: 361 GENAGSPFNTANLDFGSGDASFTSGTTVGYARSIGTNVSSASLYSAPNIYDEVHGNNDEG 420
           GEN GSPFNTANLDFG+GDASFTSGTTVGYARSIGTNVSSASLYSAPNIYDEVHGNNDEG
Sbjct: 361 GENGGSPFNTANLDFGNGDASFTSGTTVGYARSIGTNVSSASLYSAPNIYDEVHGNNDEG 420

Query: 421 NTFYGHSSWQLLPTELEDSSSIGFGLGNAASDVISRNNAGYTVGYGVSNRQSNRG 476
           NTFYGHSSWQ LPTELEDSSSIGFGLGNAASDVISRNNAGYTVGYGVSNRQSNRG
Sbjct: 421 NTFYGHSSWQSLPTELEDSSSIGFGLGNAASDVISRNNAGYTVGYGVSNRQSNRG 473

[Close]

BLAST of HG10021623 vs. NCBI nr
Match: KAA0035665.1 (heterogeneous nuclear ribonucleoprotein 1 [Cucumis melo var. makuwa] >TYK30878.1 heterogeneous nuclear ribonucleoprotein 1 [Cucumis melo var. makuwa])

HSP 1 Score: 911.4 bits (2354), Expect = 3.7e-261
Identity = 458/475 (96.42%), Postives = 465/475 (97.89%), Query Frame = 0


Query: 1   MDPGKLFIGGISWDTDEDRLREYFQSFGEVVEVMIMRDRTTGRARGFGFVVFADPVVAAR 60
           MDPGKLFIGGISWDTDEDRLREYF++FGEVVEVMIMRDRTTGRARGFGFVVFADPV AAR
Sbjct: 38  MDPGKLFIGGISWDTDEDRLREYFRNFGEVVEVMIMRDRTTGRARGFGFVVFADPVAAAR 97

Query: 61  VVLEKHVIDGRTVEAKKAVPRDDQNILSRNNTGILGSPGPTRTKKIFVGGLASTVTESDF 120
           VVLEKHVIDGRTVEAKKAVPRDDQNILSRNNTGILGSPGPTRTKKIFVGGLASTVTESDF
Sbjct: 98  VVLEKHVIDGRTVEAKKAVPRDDQNILSRNNTGILGSPGPTRTKKIFVGGLASTVTESDF 157

Query: 121 KKYFDQFGTIVDVVVMYDHNTQRPRGFGFITYESEESVEKVLYKTFHELNGKMVEVKRAV 180
           KKYFDQFGTIVDVVVMYDHNTQRPRGFGFITYESEESVEKVLYKTFHELNGKMVEVKRAV
Sbjct: 158 KKYFDQFGTIVDVVVMYDHNTQRPRGFGFITYESEESVEKVLYKTFHELNGKMVEVKRAV 217

Query: 181 PKESSPVPNRNQLGGYPYSFGRVGSYLNGYNQGYNPTSVGGYGLRSDGRFSPVTVGRSGL 240
           PKESSPVPNRNQL GYPY+FGRVGSYLNGYNQGYNPTSVGGYGLRSDGRFSPVTVGR GL
Sbjct: 218 PKESSPVPNRNQLAGYPYNFGRVGSYLNGYNQGYNPTSVGGYGLRSDGRFSPVTVGRGGL 277

Query: 241 SPISPGYGIGLNLDTGLNPNYGTGPNVSSNLSYGRVMSPSYGGNLNRYGSPNPMVYGGGG 300
           SPISPGYG+G+NLDTGLNPNYGTGP  SSNLSYGRVMSPSYGGNLNRYGSPNPMVYGGGG
Sbjct: 278 SPISPGYGMGINLDTGLNPNYGTGP--SSNLSYGRVMSPSYGGNLNRYGSPNPMVYGGGG 337

Query: 301 GGNGSILSSSVQNLWGNVGNSAGTNSSHLRTFPGSGGVHTGTNSLNSIGGLWGASVSLGH 360
           GGNGSILSSSVQNLWGNV NSAGTNSSHLRTFPGSGGVHTGTNSLN+IGGLWG S SLGH
Sbjct: 338 GGNGSILSSSVQNLWGNVSNSAGTNSSHLRTFPGSGGVHTGTNSLNNIGGLWGTSASLGH 397

Query: 361 GENAGSPFNTANLDFGSGDASFTSGTTVGYARSIGTNVSSASLYSAPNIYDEVHGNNDEG 420
           GEN GSPFNTANLDFG+GDASFTSGTTVGYARSIGTNVSSASLYSAPNIYDEVHGNNDEG
Sbjct: 398 GENGGSPFNTANLDFGNGDASFTSGTTVGYARSIGTNVSSASLYSAPNIYDEVHGNNDEG 457

Query: 421 NTFYGHSSWQLLPTELEDSSSIGFGLGNAASDVISRNNAGYTVGYGVSNRQSNRG 476
           NTFYGHSSWQ LPTELEDSSSIGFGLGNAASDVISRNNAGYTVGYGVSNRQSNRG
Sbjct: 458 NTFYGHSSWQSLPTELEDSSSIGFGLGNAASDVISRNNAGYTVGYGVSNRQSNRG 510

[Close]

BLAST of HG10021623 vs. NCBI nr
Match: XP_022142553.1 (heterogeneous nuclear ribonucleoprotein 1 [Momordica charantia] >XP_022142555.1 heterogeneous nuclear ribonucleoprotein 1 [Momordica charantia])

HSP 1 Score: 909.1 bits (2348), Expect = 1.8e-260
Identity = 455/475 (95.79%), Postives = 464/475 (97.68%), Query Frame = 0


Query: 1   MDPGKLFIGGISWDTDEDRLREYFQSFGEVVEVMIMRDRTTGRARGFGFVVFADPVVAAR 60
           MDPGKLFIGGISWDTDEDRLREYFQSFGEVVEVMIMRDRTTGRARGFGFVVFADPV+AAR
Sbjct: 1   MDPGKLFIGGISWDTDEDRLREYFQSFGEVVEVMIMRDRTTGRARGFGFVVFADPVIAAR 60

Query: 61  VVLEKHVIDGRTVEAKKAVPRDDQNILSRNNTGILGSPGPTRTKKIFVGGLASTVTESDF 120
           VVLEKHVIDGRTVEAKKAVPRDDQNILSRNNTGILGSPGPTRTKKIFVGGLASTVTESDF
Sbjct: 61  VVLEKHVIDGRTVEAKKAVPRDDQNILSRNNTGILGSPGPTRTKKIFVGGLASTVTESDF 120

Query: 121 KKYFDQFGTIVDVVVMYDHNTQRPRGFGFITYESEESVEKVLYKTFHELNGKMVEVKRAV 180
           KKYFDQFGTI DVVVMYDHNTQRPRGFGFITYESEESVEKVLYKTFHELNGKMVEVKRAV
Sbjct: 121 KKYFDQFGTITDVVVMYDHNTQRPRGFGFITYESEESVEKVLYKTFHELNGKMVEVKRAV 180

Query: 181 PKESSPVPNRNQLGGYPYSFGRVGSYLNGYNQGYNPTSVGGYGLRSDGRFSPVTVGRSGL 240
           PKESSPVPNRNQLGGYPY FGRVGSYLNGYNQGYNP SVGGYGLRSDGRFSP++VGR GL
Sbjct: 181 PKESSPVPNRNQLGGYPYGFGRVGSYLNGYNQGYNPASVGGYGLRSDGRFSPISVGRGGL 240

Query: 241 SPISPGYGIGLNLDTGLNPNYGTGPNVSSNLSYGRVMSPSYGGNLNRYGSPNPMVYGGGG 300
           SPISPGYGIGLNLDTGL+PNYG GPN +SNLSYGRVMSPSYG NLNRYGSPNPM+YGGG 
Sbjct: 241 SPISPGYGIGLNLDTGLSPNYGAGPNGNSNLSYGRVMSPSYGVNLNRYGSPNPMLYGGGS 300

Query: 301 GGNGSILSSSVQNLWGNVGNSAGTNSSHLRTFPGSGGVHTGTNSLNSIGGLWGASVSLGH 360
           GGNGSILSSSVQNLWGNVGNSAG NSSHLRTFPGSGGVHTGTNSLNSIGGLWGAS SLGH
Sbjct: 301 GGNGSILSSSVQNLWGNVGNSAGANSSHLRTFPGSGGVHTGTNSLNSIGGLWGASASLGH 360

Query: 361 GENAGSPFNTANLDFGSGDASFTSGTTVGYARSIGTNVSSASLYSAPNIYDEVHGNNDEG 420
           GENAGSPFNTANLDFG+GDASFTSGTTVGYARSIGTNVSSASLYSAPNIYDEVHGNNDEG
Sbjct: 361 GENAGSPFNTANLDFGNGDASFTSGTTVGYARSIGTNVSSASLYSAPNIYDEVHGNNDEG 420

Query: 421 NTFYGHSSWQLLPTELEDSSSIGFGLGNAASDVISRNNAGYTVGYGVSNRQSNRG 476
           N+FYGHSSWQ LPTELEDSSSIGFGLGNAASDVISRN+AGYTVGYGVSNRQSNRG
Sbjct: 421 NSFYGHSSWQSLPTELEDSSSIGFGLGNAASDVISRNSAGYTVGYGVSNRQSNRG 475

[Close]

BLAST of HG10021623 vs. NCBI nr
Match: XP_031745329.1 (heterogeneous nuclear ribonucleoprotein 1-like [Cucumis sativus] >KGN65038.1 hypothetical protein Csa_013020 [Cucumis sativus])

HSP 1 Score: 898.3 bits (2320), Expect = 3.2e-257
Identity = 452/475 (95.16%), Postives = 462/475 (97.26%), Query Frame = 0


Query: 1   MDPGKLFIGGISWDTDEDRLREYFQSFGEVVEVMIMRDRTTGRARGFGFVVFADPVVAAR 60
           MDPGKLFIGGISWDTDEDRLREYF++FGEVVEVMIMRDR TGRARGFGFVVFADPV AAR
Sbjct: 1   MDPGKLFIGGISWDTDEDRLREYFRNFGEVVEVMIMRDRATGRARGFGFVVFADPVAAAR 60

Query: 61  VVLEKHVIDGRTVEAKKAVPRDDQNILSRNNTGILGSPGPTRTKKIFVGGLASTVTESDF 120
           VVLEKHVIDGRTVEAKKAVPRDDQNILSRNNTGILGSPGPTRTKKIFVGGLASTVTESDF
Sbjct: 61  VVLEKHVIDGRTVEAKKAVPRDDQNILSRNNTGILGSPGPTRTKKIFVGGLASTVTESDF 120

Query: 121 KKYFDQFGTIVDVVVMYDHNTQRPRGFGFITYESEESVEKVLYKTFHELNGKMVEVKRAV 180
           KKYFDQFGTIVDVVVMYDHNTQRPRGFGFITYESEESVEKVLYKTFHELNGKMVEVKRAV
Sbjct: 121 KKYFDQFGTIVDVVVMYDHNTQRPRGFGFITYESEESVEKVLYKTFHELNGKMVEVKRAV 180

Query: 181 PKESSPVPNRNQLGGYPYSFGRVGSYLNGYNQGYNPTSVGGYGLRSDGRFSPVTVGRSGL 240
           PKESSPVPNRNQL GYP++FGRVGSYLNGYNQGYNPT+VGGYGLRSDGRFSPVTVGR GL
Sbjct: 181 PKESSPVPNRNQLAGYPFNFGRVGSYLNGYNQGYNPTAVGGYGLRSDGRFSPVTVGRGGL 240

Query: 241 SPISPGYGIGLNLDTGLNPNYGTGPNVSSNLSYGRVMSPSYGGNLNRYGSPNPMVYGGGG 300
           SPISPGYG+GLNL+TGLNPNYGTGPNVSSNLSYGRVMSPSY GNLNRYGSPNPMVY  GG
Sbjct: 241 SPISPGYGMGLNLETGLNPNYGTGPNVSSNLSYGRVMSPSYSGNLNRYGSPNPMVY-SGG 300

Query: 301 GGNGSILSSSVQNLWGNVGNSAGTNSSHLRTFPGSGGVHTGTNSLNSIGGLWGASVSLGH 360
           GGNGSILSSSVQNLWGNV  SAGTNSSHLRTFPGSGGVHTGT+SLN+IGGLWGAS SLGH
Sbjct: 301 GGNGSILSSSVQNLWGNVSTSAGTNSSHLRTFPGSGGVHTGTSSLNNIGGLWGASASLGH 360

Query: 361 GENAGSPFNTANLDFGSGDASFTSGTTVGYARSIGTNVSSASLYSAPNIYDEVHGNNDEG 420
           GENAGS FNT NLDFG+GDASFTSGTTVGYARSIGTNVSSASLYSAPNIYDEVHGNNDEG
Sbjct: 361 GENAGSSFNTVNLDFGNGDASFTSGTTVGYARSIGTNVSSASLYSAPNIYDEVHGNNDEG 420

Query: 421 NTFYGHSSWQLLPTELEDSSSIGFGLGNAASDVISRNNAGYTVGYGVSNRQSNRG 476
           NTFYGHSSWQ LPTELEDSSSIGFGLGNAASDVISRNNAGYTVGYGVSNRQSNRG
Sbjct: 421 NTFYGHSSWQSLPTELEDSSSIGFGLGNAASDVISRNNAGYTVGYGVSNRQSNRG 474

[Close]

BLAST of HG10021623 vs. ExPASy Swiss-Prot
Match: Q8W034 (Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis thaliana OX=3702 GN=RNP1 PE=1 SV=1)

HSP 1 Score: 233.8 bits (595), Expect = 4.4e-60
Identity = 161/424 (37.97%), Postives = 225/424 (53.07%), Query Frame = 0


Query: 2   DPGKLFIGGISWDTDEDRLREYFQSFGEVVEVMIMRDRTTGRARGFGFVVFADPVVAARV 61
           D GKLF+GGISW+TDED+LRE+F ++GEV + ++MRD+ TGR RGFGFV+F+DP V  RV
Sbjct: 4   DQGKLFVGGISWETDEDKLREHFTNYGEVSQAIVMRDKLTGRPRGFGFVIFSDPSVLDRV 63

Query: 62  VLEKHVIDGRTVEAKKAVPRDDQNILSR----NNTGILGSPGPTRTKKIFVGGLASTVTE 121
           + EKH ID R V+ K+A+ R++Q +  R    N +   G     +TKKIFVGGL  T+T+
Sbjct: 64  LQEKHSIDTREVDVKRAMSREEQQVSGRTGNLNTSRSSGGDAYNKTKKIFVGGLPPTLTD 123

Query: 122 SDFKKYFDQFGTIVDVVVMYDHNTQRPRGFGFITYESEESVEKVLYKTFHELNGKMVEVK 181
            +F++YF+ +G + DV +MYD  T RPRGFGF++++SE++V+ VL+KTFH+L+GK VEVK
Sbjct: 124 EEFRQYFEVYGPVTDVAIMYDQATNRPRGFGFVSFDSEDAVDSVLHKTFHDLSGKQVEVK 183

Query: 182 RAVPKESSPVPNRNQLGGYPYSFGRVGSYLNGYNQGYNPTSVGGYGLRSDGRFSPVTVGR 241
           RA+PK+++P       GG   S G  GS   GY QGY        G     RF       
Sbjct: 184 RALPKDANP-------GGGGRSMGGGGS--GGY-QGYGGNESSYDGRMDSNRFLQHQSVG 243

Query: 242 SGLSPISPGYGIGLNLDTGLNPNYGTGPNVSSNLSYGRVMSPSYGGNLNRYGSPNPMVYG 301
           +GL    P YG      +G    YG G N +   +YG      Y G+   YG+     YG
Sbjct: 244 NGL----PSYG-----SSGYGAGYGNGSNGAGYGAYG-----GYTGSAGGYGAGATAGYG 303

Query: 302 G---GGGGNGSILSSSVQNLWGNVGNSAGTNSSHLRTFPGSGGVHTG------------- 361
                G G GS    + +N W    +S   N  +     GSG  H+G             
Sbjct: 304 ATNIPGAGYGSSTGVAPRNSWDTPASSGYGNPGY-----GSGAAHSGYGVPGAAPPTQSP 363

Query: 362 ---TNSLNSIGGLWGASVSLGH------------GENAGSPFNTANLDFGSGDASFTSGT 391
              +N     GG  G+    G+            G  + +P +   +  G GD S+ S  
Sbjct: 364 SGYSNQGYGYGGYSGSDSGYGNQAAYGVVGGRPSGGGSNNPGSGGYMGGGYGDGSWRSDP 398

[Close]

BLAST of HG10021623 vs. ExPASy Swiss-Prot
Match: Q96DH6 (RNA-binding protein Musashi homolog 2 OS=Homo sapiens OX=9606 GN=MSI2 PE=1 SV=1)

HSP 1 Score: 196.4 bits (498), Expect = 7.9e-49
Identity = 126/315 (40.00%), Postives = 169/315 (53.65%), Query Frame = 0


Query: 2   DPGKLFIGGISWDTDEDRLREYFQSFGEVVEVMIMRDRTTGRARGFGFVVFADPVVAARV 61
           DPGK+FIGG+SW T  D LR+YF  FGE+ E M+MRD TT R+RGFGFV FADP    +V
Sbjct: 19  DPGKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKV 78

Query: 62  VLE-KHVIDGRTVEAKKAVPRDDQNILSRNNTGILGSPGPTRTKKIFVGGLASTVTESDF 121
           + +  H +D +T++ K A PR  Q  +             TRTKKIFVGGL++     D 
Sbjct: 79  LGQPHHELDSKTIDPKVAFPRRAQPKM------------VTRTKKIFVGGLSANTVVEDV 138

Query: 122 KKYFDQFGTIVDVVVMYDHNTQRPRGFGFITYESEESVEKVLYKTFHELNGKMVEVKRAV 181
           K+YF+QFG + D ++M+D  T R RGFGF+T+E+E+ VEKV    FHE+N KMVE K+A 
Sbjct: 139 KQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQ 198

Query: 182 PKE-SSPVPNRNQLGGYPYS-------FGRVG--SYLNGYNQGYNPTSVGGYGLRSDG-- 241
           PKE   P   R +  G PY+        G +G  +++  Y +GY P     YG +  G  
Sbjct: 199 PKEVMFPPGTRGRARGLPYTMDAFMLGMGMLGYPNFVATYGRGY-PGFAPSYGYQFPGFP 258

Query: 242 --RFSPVTVGR------SGLSPISPGYGIGLNLDTGLNPNYGTGPNVSSNLSYGRVMSPS 296
              + PV          SG +P  PG   G N    +   YG     S   +Y    SP 
Sbjct: 259 AAAYGPVAAAAVAAARGSGSNPARPGGFPGANSPGPVADLYGPASQDSGVGNYISAASPQ 318

[Close]

BLAST of HG10021623 vs. ExPASy Swiss-Prot
Match: Q920Q6 (RNA-binding protein Musashi homolog 2 OS=Mus musculus OX=10090 GN=Msi2 PE=1 SV=1)

HSP 1 Score: 188.7 bits (478), Expect = 1.6e-46
Identity = 135/351 (38.46%), Postives = 181/351 (51.57%), Query Frame = 0


Query: 2   DPGKLFIGGISWDTDEDRLREYFQSFGEVVEVMIMRDRTTGRARGFGFVVFADPVVAARV 61
           DPGK+FIGG+SW T  D LR+YF  FGE+ E M+MRD TT R+RGFGFV FADP    +V
Sbjct: 19  DPGKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKV 78

Query: 62  VLE-KHVIDGRTVEAKKAVPRDDQNILSRNNTGILGSPGPTRTKKIFVGGLASTVTESDF 121
           + +  H +D +T++ K A PR  Q  +             TRTKKIFVGGL++     D 
Sbjct: 79  LGQPHHELDSKTIDPKVAFPRRAQPKM------------VTRTKKIFVGGLSANTVVEDV 138

Query: 122 KKYFDQFGTIVDVVVMYDHNTQRPRGFGFITYESEESVEKVLYKTFHELNGKMVEVKRAV 181
           K+YF+QFG + D ++M+D  T R RGFGF+T+E+E+ VEKV    FHE+N KMVE K+A 
Sbjct: 139 KQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQ 198

Query: 182 PKE-SSPVPNRNQLGGYPYS-------FGRVG--SYLNGYNQGYNPTSVGGYGLRSDGRF 241
           PKE   P   R +  G PY+        G +G  +++  Y +GY P     YG +  G F
Sbjct: 199 PKEVMFPPGTRGRARGLPYTMDAFMLGMGMLGYPNFVATYGRGY-PGFAPSYGYQFPG-F 258

Query: 242 SPVTVGRSGLSPISPGYGIGLNLDTGLNPNYGTGPNVSSNLSYGRVMSPSYGGNLNRYGS 301
                G    + ++   G  LN       +Y   PN      +G   SP+          
Sbjct: 259 PAAAYGPVAAAAVAAARGSVLN-------SYSAQPN------FGAPASPA---------G 318

Query: 302 PNPMVYGGGGGGNGSILSSSVQNLWGNVGNSAGTNS--SHLRTFPGSGGVH 340
            NP   GG  G N       V +L+G     +G  +  S     PGSG  H
Sbjct: 319 SNPARPGGFPGANS---PGPVADLYGPASQDSGVGNYISAASPQPGSGFGH 330

[Close]

BLAST of HG10021623 vs. ExPASy Swiss-Prot
Match: Q9VVE5 (RNA-binding protein Musashi homolog Rbp6 OS=Drosophila melanogaster OX=7227 GN=Rbp6 PE=2 SV=3)

HSP 1 Score: 180.3 bits (456), Expect = 5.8e-44
Identity = 91/183 (49.73%), Postives = 124/183 (67.76%), Query Frame = 0


Query: 2   DPGKLFIGGISWDTDEDRLREYFQSFGEVVEVMIMRDRTTGRARGFGFVVFADPVVAARV 61
           DPGK+FIGG+SW T  + LR+YF  +G++ E M+M+D TT R+RGFGFV F+DP    +V
Sbjct: 27  DPGKMFIGGLSWQTSPESLRDYFGRYGDISEAMVMKDPTTRRSRGFGFVTFSDPNSVDKV 86

Query: 62  VLE-KHVIDGRTVEAKKAVPRDDQNILSRNNTGILGSPGPTRTKKIFVGGLASTVTESDF 121
           + +  H +DG+ V+ K A PR       R +  ++     TRTKKIFVGGL++  T  D 
Sbjct: 87  LTQGTHELDGKKVDPKVAFPR-------RAHPKMV-----TRTKKIFVGGLSAPTTLEDV 146

Query: 122 KKYFDQFGTIVDVVVMYDHNTQRPRGFGFITYESEESVEKVLYKTFHELNGKMVEVKRAV 181
           K YF+QFG I D ++M+D  T R RGFGF+T++SE+ V+KV    FHE+N KMVE K+A 
Sbjct: 147 KSYFEQFGPIEDAMLMFDKQTNRHRGFGFVTFQSEDVVDKVCEIHFHEINNKMVECKKAQ 197

Query: 182 PKE 184
           PKE
Sbjct: 207 PKE 197

[Close]

BLAST of HG10021623 vs. ExPASy Swiss-Prot
Match: Q98SJ2 (DAZ-associated protein 1 OS=Xenopus laevis OX=8355 GN=dazap1 PE=1 SV=1)

HSP 1 Score: 179.5 bits (454), Expect = 1.0e-43
Identity = 114/293 (38.91%), Postives = 158/293 (53.92%), Query Frame = 0


Query: 4   GKLFIGGISWDTDEDRLREYFQSFGEVVEVMIMRDRTTGRARGFGFVVFADPVVAARVVL 63
           GKLF+GG+ W T ++ LR YF  +GEVV+ +IM+D+TT ++RGFGFV F DP     V+ 
Sbjct: 10  GKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLA 69

Query: 64  EK-HVIDGRTVEAKKAVPRDDQNILSRNNTGILGSPGPT---RTKKIFVGGLASTVTESD 123
            + H +DGR ++ K   PR  Q   SR   G       T   R+ KIFVGG+     E++
Sbjct: 70  SRPHTLDGRNIDPKPCTPRGMQPERSRPREGWQQKEPRTENSRSNKIFVGGIPHNCGETE 129

Query: 124 FKKYFDQFGTIVDVVVMYDHNTQRPRGFGFITYESEESVEKVLYKTFHELNGKMVEVKRA 183
            K+YF++FG + +VV++YD   QRPRGFGFIT+E E+SV++ +   FH++ GK VEVKRA
Sbjct: 130 LKEYFNRFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRA 189

Query: 184 VPKESSP----VPNRNQLGGYPYSFGRVGSYLNGYN-------QGYNP--------TSVG 243
            P++S       P  NQ G        + S  NG+        QGY+P         ++G
Sbjct: 190 EPRDSKSQTPGPPGSNQWGS-----RAMQSTANGWTGQPPQTWQGYSPQGMWMPTGQTIG 249

Query: 244 GYGLRSDGR--------FSPVTVGRSGLSPISPGYGIGLNLDTGLNPNYGTGP 266
           GYG +  GR        F+P  V  +   P  P  G      T     YG GP
Sbjct: 250 GYG-QPAGRGGPPPPPSFAPFLVSTTP-GPFPPPQGFPPGYATPPPFGYGYGP 295

[Close]

BLAST of HG10021623 vs. ExPASy TrEMBL
Match: A0A5D3E516 (Heterogeneous nuclear ribonucleoprotein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G00810 PE=4 SV=1)

HSP 1 Score: 911.4 bits (2354), Expect = 1.8e-261
Identity = 458/475 (96.42%), Postives = 465/475 (97.89%), Query Frame = 0


Query: 1   MDPGKLFIGGISWDTDEDRLREYFQSFGEVVEVMIMRDRTTGRARGFGFVVFADPVVAAR 60
           MDPGKLFIGGISWDTDEDRLREYF++FGEVVEVMIMRDRTTGRARGFGFVVFADPV AAR
Sbjct: 38  MDPGKLFIGGISWDTDEDRLREYFRNFGEVVEVMIMRDRTTGRARGFGFVVFADPVAAAR 97

Query: 61  VVLEKHVIDGRTVEAKKAVPRDDQNILSRNNTGILGSPGPTRTKKIFVGGLASTVTESDF 120
           VVLEKHVIDGRTVEAKKAVPRDDQNILSRNNTGILGSPGPTRTKKIFVGGLASTVTESDF
Sbjct: 98  VVLEKHVIDGRTVEAKKAVPRDDQNILSRNNTGILGSPGPTRTKKIFVGGLASTVTESDF 157

Query: 121 KKYFDQFGTIVDVVVMYDHNTQRPRGFGFITYESEESVEKVLYKTFHELNGKMVEVKRAV 180
           KKYFDQFGTIVDVVVMYDHNTQRPRGFGFITYESEESVEKVLYKTFHELNGKMVEVKRAV
Sbjct: 158 KKYFDQFGTIVDVVVMYDHNTQRPRGFGFITYESEESVEKVLYKTFHELNGKMVEVKRAV 217

Query: 181 PKESSPVPNRNQLGGYPYSFGRVGSYLNGYNQGYNPTSVGGYGLRSDGRFSPVTVGRSGL 240
           PKESSPVPNRNQL GYPY+FGRVGSYLNGYNQGYNPTSVGGYGLRSDGRFSPVTVGR GL
Sbjct: 218 PKESSPVPNRNQLAGYPYNFGRVGSYLNGYNQGYNPTSVGGYGLRSDGRFSPVTVGRGGL 277

Query: 241 SPISPGYGIGLNLDTGLNPNYGTGPNVSSNLSYGRVMSPSYGGNLNRYGSPNPMVYGGGG 300
           SPISPGYG+G+NLDTGLNPNYGTGP  SSNLSYGRVMSPSYGGNLNRYGSPNPMVYGGGG
Sbjct: 278 SPISPGYGMGINLDTGLNPNYGTGP--SSNLSYGRVMSPSYGGNLNRYGSPNPMVYGGGG 337

Query: 301 GGNGSILSSSVQNLWGNVGNSAGTNSSHLRTFPGSGGVHTGTNSLNSIGGLWGASVSLGH 360
           GGNGSILSSSVQNLWGNV NSAGTNSSHLRTFPGSGGVHTGTNSLN+IGGLWG S SLGH
Sbjct: 338 GGNGSILSSSVQNLWGNVSNSAGTNSSHLRTFPGSGGVHTGTNSLNNIGGLWGTSASLGH 397

Query: 361 GENAGSPFNTANLDFGSGDASFTSGTTVGYARSIGTNVSSASLYSAPNIYDEVHGNNDEG 420
           GEN GSPFNTANLDFG+GDASFTSGTTVGYARSIGTNVSSASLYSAPNIYDEVHGNNDEG
Sbjct: 398 GENGGSPFNTANLDFGNGDASFTSGTTVGYARSIGTNVSSASLYSAPNIYDEVHGNNDEG 457

Query: 421 NTFYGHSSWQLLPTELEDSSSIGFGLGNAASDVISRNNAGYTVGYGVSNRQSNRG 476
           NTFYGHSSWQ LPTELEDSSSIGFGLGNAASDVISRNNAGYTVGYGVSNRQSNRG
Sbjct: 458 NTFYGHSSWQSLPTELEDSSSIGFGLGNAASDVISRNNAGYTVGYGVSNRQSNRG 510

[Close]

BLAST of HG10021623 vs. ExPASy TrEMBL
Match: A0A1S3CK54 (heterogeneous nuclear ribonucleoprotein 1 OS=Cucumis melo OX=3656 GN=LOC103501720 PE=4 SV=1)

HSP 1 Score: 911.4 bits (2354), Expect = 1.8e-261
Identity = 458/475 (96.42%), Postives = 465/475 (97.89%), Query Frame = 0


Query: 1   MDPGKLFIGGISWDTDEDRLREYFQSFGEVVEVMIMRDRTTGRARGFGFVVFADPVVAAR 60
           MDPGKLFIGGISWDTDEDRLREYF++FGEVVEVMIMRDRTTGRARGFGFVVFADPV AAR
Sbjct: 1   MDPGKLFIGGISWDTDEDRLREYFRNFGEVVEVMIMRDRTTGRARGFGFVVFADPVAAAR 60

Query: 61  VVLEKHVIDGRTVEAKKAVPRDDQNILSRNNTGILGSPGPTRTKKIFVGGLASTVTESDF 120
           VVLEKHVIDGRTVEAKKAVPRDDQNILSRNNTGILGSPGPTRTKKIFVGGLASTVTESDF
Sbjct: 61  VVLEKHVIDGRTVEAKKAVPRDDQNILSRNNTGILGSPGPTRTKKIFVGGLASTVTESDF 120

Query: 121 KKYFDQFGTIVDVVVMYDHNTQRPRGFGFITYESEESVEKVLYKTFHELNGKMVEVKRAV 180
           KKYFDQFGTIVDVVVMYDHNTQRPRGFGFITYESEESVEKVLYKTFHELNGKMVEVKRAV
Sbjct: 121 KKYFDQFGTIVDVVVMYDHNTQRPRGFGFITYESEESVEKVLYKTFHELNGKMVEVKRAV 180

Query: 181 PKESSPVPNRNQLGGYPYSFGRVGSYLNGYNQGYNPTSVGGYGLRSDGRFSPVTVGRSGL 240
           PKESSPVPNRNQL GYPY+FGRVGSYLNGYNQGYNPTSVGGYGLRSDGRFSPVTVGR GL
Sbjct: 181 PKESSPVPNRNQLAGYPYNFGRVGSYLNGYNQGYNPTSVGGYGLRSDGRFSPVTVGRGGL 240

Query: 241 SPISPGYGIGLNLDTGLNPNYGTGPNVSSNLSYGRVMSPSYGGNLNRYGSPNPMVYGGGG 300
           SPISPGYG+G+NLDTGLNPNYGTGP  SSNLSYGRVMSPSYGGNLNRYGSPNPMVYGGGG
Sbjct: 241 SPISPGYGMGINLDTGLNPNYGTGP--SSNLSYGRVMSPSYGGNLNRYGSPNPMVYGGGG 300

Query: 301 GGNGSILSSSVQNLWGNVGNSAGTNSSHLRTFPGSGGVHTGTNSLNSIGGLWGASVSLGH 360
           GGNGSILSSSVQNLWGNV NSAGTNSSHLRTFPGSGGVHTGTNSLN+IGGLWG S SLGH
Sbjct: 301 GGNGSILSSSVQNLWGNVSNSAGTNSSHLRTFPGSGGVHTGTNSLNNIGGLWGTSASLGH 360

Query: 361 GENAGSPFNTANLDFGSGDASFTSGTTVGYARSIGTNVSSASLYSAPNIYDEVHGNNDEG 420
           GEN GSPFNTANLDFG+GDASFTSGTTVGYARSIGTNVSSASLYSAPNIYDEVHGNNDEG
Sbjct: 361 GENGGSPFNTANLDFGNGDASFTSGTTVGYARSIGTNVSSASLYSAPNIYDEVHGNNDEG 420

Query: 421 NTFYGHSSWQLLPTELEDSSSIGFGLGNAASDVISRNNAGYTVGYGVSNRQSNRG 476
           NTFYGHSSWQ LPTELEDSSSIGFGLGNAASDVISRNNAGYTVGYGVSNRQSNRG
Sbjct: 421 NTFYGHSSWQSLPTELEDSSSIGFGLGNAASDVISRNNAGYTVGYGVSNRQSNRG 473

[Close]

BLAST of HG10021623 vs. ExPASy TrEMBL
Match: A0A6J1CL94 (heterogeneous nuclear ribonucleoprotein 1 OS=Momordica charantia OX=3673 GN=LOC111012638 PE=4 SV=1)

HSP 1 Score: 909.1 bits (2348), Expect = 8.8e-261
Identity = 455/475 (95.79%), Postives = 464/475 (97.68%), Query Frame = 0


Query: 1   MDPGKLFIGGISWDTDEDRLREYFQSFGEVVEVMIMRDRTTGRARGFGFVVFADPVVAAR 60
           MDPGKLFIGGISWDTDEDRLREYFQSFGEVVEVMIMRDRTTGRARGFGFVVFADPV+AAR
Sbjct: 1   MDPGKLFIGGISWDTDEDRLREYFQSFGEVVEVMIMRDRTTGRARGFGFVVFADPVIAAR 60

Query: 61  VVLEKHVIDGRTVEAKKAVPRDDQNILSRNNTGILGSPGPTRTKKIFVGGLASTVTESDF 120
           VVLEKHVIDGRTVEAKKAVPRDDQNILSRNNTGILGSPGPTRTKKIFVGGLASTVTESDF
Sbjct: 61  VVLEKHVIDGRTVEAKKAVPRDDQNILSRNNTGILGSPGPTRTKKIFVGGLASTVTESDF 120

Query: 121 KKYFDQFGTIVDVVVMYDHNTQRPRGFGFITYESEESVEKVLYKTFHELNGKMVEVKRAV 180
           KKYFDQFGTI DVVVMYDHNTQRPRGFGFITYESEESVEKVLYKTFHELNGKMVEVKRAV
Sbjct: 121 KKYFDQFGTITDVVVMYDHNTQRPRGFGFITYESEESVEKVLYKTFHELNGKMVEVKRAV 180

Query: 181 PKESSPVPNRNQLGGYPYSFGRVGSYLNGYNQGYNPTSVGGYGLRSDGRFSPVTVGRSGL 240
           PKESSPVPNRNQLGGYPY FGRVGSYLNGYNQGYNP SVGGYGLRSDGRFSP++VGR GL
Sbjct: 181 PKESSPVPNRNQLGGYPYGFGRVGSYLNGYNQGYNPASVGGYGLRSDGRFSPISVGRGGL 240

Query: 241 SPISPGYGIGLNLDTGLNPNYGTGPNVSSNLSYGRVMSPSYGGNLNRYGSPNPMVYGGGG 300
           SPISPGYGIGLNLDTGL+PNYG GPN +SNLSYGRVMSPSYG NLNRYGSPNPM+YGGG 
Sbjct: 241 SPISPGYGIGLNLDTGLSPNYGAGPNGNSNLSYGRVMSPSYGVNLNRYGSPNPMLYGGGS 300

Query: 301 GGNGSILSSSVQNLWGNVGNSAGTNSSHLRTFPGSGGVHTGTNSLNSIGGLWGASVSLGH 360
           GGNGSILSSSVQNLWGNVGNSAG NSSHLRTFPGSGGVHTGTNSLNSIGGLWGAS SLGH
Sbjct: 301 GGNGSILSSSVQNLWGNVGNSAGANSSHLRTFPGSGGVHTGTNSLNSIGGLWGASASLGH 360

Query: 361 GENAGSPFNTANLDFGSGDASFTSGTTVGYARSIGTNVSSASLYSAPNIYDEVHGNNDEG 420
           GENAGSPFNTANLDFG+GDASFTSGTTVGYARSIGTNVSSASLYSAPNIYDEVHGNNDEG
Sbjct: 361 GENAGSPFNTANLDFGNGDASFTSGTTVGYARSIGTNVSSASLYSAPNIYDEVHGNNDEG 420

Query: 421 NTFYGHSSWQLLPTELEDSSSIGFGLGNAASDVISRNNAGYTVGYGVSNRQSNRG 476
           N+FYGHSSWQ LPTELEDSSSIGFGLGNAASDVISRN+AGYTVGYGVSNRQSNRG
Sbjct: 421 NSFYGHSSWQSLPTELEDSSSIGFGLGNAASDVISRNSAGYTVGYGVSNRQSNRG 475

[Close]

BLAST of HG10021623 vs. ExPASy TrEMBL
Match: A0A0A0LTE8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G181500 PE=4 SV=1)

HSP 1 Score: 898.3 bits (2320), Expect = 1.5e-257
Identity = 452/475 (95.16%), Postives = 462/475 (97.26%), Query Frame = 0


Query: 1   MDPGKLFIGGISWDTDEDRLREYFQSFGEVVEVMIMRDRTTGRARGFGFVVFADPVVAAR 60
           MDPGKLFIGGISWDTDEDRLREYF++FGEVVEVMIMRDR TGRARGFGFVVFADPV AAR
Sbjct: 1   MDPGKLFIGGISWDTDEDRLREYFRNFGEVVEVMIMRDRATGRARGFGFVVFADPVAAAR 60

Query: 61  VVLEKHVIDGRTVEAKKAVPRDDQNILSRNNTGILGSPGPTRTKKIFVGGLASTVTESDF 120
           VVLEKHVIDGRTVEAKKAVPRDDQNILSRNNTGILGSPGPTRTKKIFVGGLASTVTESDF
Sbjct: 61  VVLEKHVIDGRTVEAKKAVPRDDQNILSRNNTGILGSPGPTRTKKIFVGGLASTVTESDF 120

Query: 121 KKYFDQFGTIVDVVVMYDHNTQRPRGFGFITYESEESVEKVLYKTFHELNGKMVEVKRAV 180
           KKYFDQFGTIVDVVVMYDHNTQRPRGFGFITYESEESVEKVLYKTFHELNGKMVEVKRAV
Sbjct: 121 KKYFDQFGTIVDVVVMYDHNTQRPRGFGFITYESEESVEKVLYKTFHELNGKMVEVKRAV 180

Query: 181 PKESSPVPNRNQLGGYPYSFGRVGSYLNGYNQGYNPTSVGGYGLRSDGRFSPVTVGRSGL 240
           PKESSPVPNRNQL GYP++FGRVGSYLNGYNQGYNPT+VGGYGLRSDGRFSPVTVGR GL
Sbjct: 181 PKESSPVPNRNQLAGYPFNFGRVGSYLNGYNQGYNPTAVGGYGLRSDGRFSPVTVGRGGL 240

Query: 241 SPISPGYGIGLNLDTGLNPNYGTGPNVSSNLSYGRVMSPSYGGNLNRYGSPNPMVYGGGG 300
           SPISPGYG+GLNL+TGLNPNYGTGPNVSSNLSYGRVMSPSY GNLNRYGSPNPMVY  GG
Sbjct: 241 SPISPGYGMGLNLETGLNPNYGTGPNVSSNLSYGRVMSPSYSGNLNRYGSPNPMVY-SGG 300

Query: 301 GGNGSILSSSVQNLWGNVGNSAGTNSSHLRTFPGSGGVHTGTNSLNSIGGLWGASVSLGH 360
           GGNGSILSSSVQNLWGNV  SAGTNSSHLRTFPGSGGVHTGT+SLN+IGGLWGAS SLGH
Sbjct: 301 GGNGSILSSSVQNLWGNVSTSAGTNSSHLRTFPGSGGVHTGTSSLNNIGGLWGASASLGH 360

Query: 361 GENAGSPFNTANLDFGSGDASFTSGTTVGYARSIGTNVSSASLYSAPNIYDEVHGNNDEG 420
           GENAGS FNT NLDFG+GDASFTSGTTVGYARSIGTNVSSASLYSAPNIYDEVHGNNDEG
Sbjct: 361 GENAGSSFNTVNLDFGNGDASFTSGTTVGYARSIGTNVSSASLYSAPNIYDEVHGNNDEG 420

Query: 421 NTFYGHSSWQLLPTELEDSSSIGFGLGNAASDVISRNNAGYTVGYGVSNRQSNRG 476
           NTFYGHSSWQ LPTELEDSSSIGFGLGNAASDVISRNNAGYTVGYGVSNRQSNRG
Sbjct: 421 NTFYGHSSWQSLPTELEDSSSIGFGLGNAASDVISRNNAGYTVGYGVSNRQSNRG 474

[Close]

BLAST of HG10021623 vs. ExPASy TrEMBL
Match: A0A6J1EKS0 (heterogeneous nuclear ribonucleoprotein 1-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111434205 PE=4 SV=1)

HSP 1 Score: 894.0 bits (2309), Expect = 2.9e-256
Identity = 448/475 (94.32%), Postives = 455/475 (95.79%), Query Frame = 0


Query: 1   MDPGKLFIGGISWDTDEDRLREYFQSFGEVVEVMIMRDRTTGRARGFGFVVFADPVVAAR 60
           MDPGKLFIGGISWDTDEDRLREYFQSFGEVVEVMIMRDRTTGRARGFGFVVFADPVVAAR
Sbjct: 33  MDPGKLFIGGISWDTDEDRLREYFQSFGEVVEVMIMRDRTTGRARGFGFVVFADPVVAAR 92

Query: 61  VVLEKHVIDGRTVEAKKAVPRDDQNILSRNNTGILGSPGPTRTKKIFVGGLASTVTESDF 120
           VVLEKHVIDGRTVEAKKAVPRDDQN+LSRNNTGILGSPGPTRTKKIFVGGLASTVTESDF
Sbjct: 93  VVLEKHVIDGRTVEAKKAVPRDDQNVLSRNNTGILGSPGPTRTKKIFVGGLASTVTESDF 152

Query: 121 KKYFDQFGTIVDVVVMYDHNTQRPRGFGFITYESEESVEKVLYKTFHELNGKMVEVKRAV 180
           K YFDQFGTI DVVVMYDHNTQRPRGFGFITYESEESVEKVLYKTFHELNGKMVEVKRAV
Sbjct: 153 KTYFDQFGTITDVVVMYDHNTQRPRGFGFITYESEESVEKVLYKTFHELNGKMVEVKRAV 212

Query: 181 PKESSPVPNRNQLGGYPYSFGRVGSYLNGYNQGYNPTSVGGYGLRSDGRFSPVTVGRSGL 240
           PKESSPVPNR+QLG YPY FGRVGSYLNGYNQGYNPTSVG YGLRSD RFSPVTVGR GL
Sbjct: 213 PKESSPVPNRSQLGAYPYGFGRVGSYLNGYNQGYNPTSVGAYGLRSDDRFSPVTVGRGGL 272

Query: 241 SPISPGYGIGLNLDTGLNPNYGTGPNVSSNLSYGRVMSPSYGGNLNRYGSPNPMVYGGGG 300
           SPISPGYGIGLNLDTGLNPNYGTG NV SNLSYGRVMSPSYGGNLNRYGSPNPMVYGGG 
Sbjct: 273 SPISPGYGIGLNLDTGLNPNYGTGLNVGSNLSYGRVMSPSYGGNLNRYGSPNPMVYGGGN 332

Query: 301 GGNGSILSSSVQNLWGNVGNSAGTNSSHLRTFPGSGGVHTGTNSLNSIGGLWGASVSLGH 360
           GGNGSILSSSVQNLWGNVGNS GTNSSHLRTFPGSGGVHTGTNSLN IGGLWGAS SL H
Sbjct: 333 GGNGSILSSSVQNLWGNVGNSVGTNSSHLRTFPGSGGVHTGTNSLNGIGGLWGASASLVH 392

Query: 361 GENAGSPFNTANLDFGSGDASFTSGTTVGYARSIGTNVSSASLYSAPNIYDEVHGNNDEG 420
           GE++GSPFN  NLDF SGD S TSGTTVGYARS+GTNVSSASLYSAPNIYDEVHGNNDEG
Sbjct: 393 GEHSGSPFNAVNLDFASGDGSLTSGTTVGYARSVGTNVSSASLYSAPNIYDEVHGNNDEG 452

Query: 421 NTFYGHSSWQLLPTELEDSSSIGFGLGNAASDVISRNNAGYTVGYGVSNRQSNRG 476
           N+FYGHSSWQLLPTELEDSSS+GFGLGNAASDVISRNN GYTVGYGVSNRQSNRG
Sbjct: 453 NSFYGHSSWQLLPTELEDSSSVGFGLGNAASDVISRNNGGYTVGYGVSNRQSNRG 507

[Close]

BLAST of HG10021623 vs. TAIR 10
Match: AT3G07810.2 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 459.9 bits (1182), Expect = 2.7e-129
Identity = 282/498 (56.63%), Postives = 335/498 (67.27%), Query Frame = 0


Query: 2   DPGKLFIGGISWDTDEDRLREYFQSFGEVVEVMIMRDRTTGRARGFGFVVFADPVVAARV 61
           D GKLFIGGISWDT+E+RL+EYF SFGEV+E +I++DRTTGRARGFGFVVFADP VA  V
Sbjct: 4   DNGKLFIGGISWDTNEERLKEYFSSFGEVIEAVILKDRTTGRARGFGFVVFADPAVAEIV 63

Query: 62  VLEKHVIDGRTVEAKKAVPRDDQNILSR-NNTGILGSP-GPTRTKKIFVGGLASTVTESD 121
           + EKH IDGR VEAKKAVPRDDQN+++R N++ I GSP GP RT+KIFVGGL S+VTESD
Sbjct: 64  ITEKHNIDGRLVEAKKAVPRDDQNMVNRSNSSSIQGSPGGPGRTRKIFVGGLPSSVTESD 123

Query: 122 FKKYFDQFGTIVDVVVMYDHNTQRPRGFGFITYESEESVEKVLYKTFHELNGKMVEVKRA 181
           FK YF+QFGT  DVVVMYDHNTQRPRGFGFITY+SEE+VEKVL KTFHELNGKMVEVKRA
Sbjct: 124 FKTYFEQFGTTTDVVVMYDHNTQRPRGFGFITYDSEEAVEKVLLKTFHELNGKMVEVKRA 183

Query: 182 VPKESSPVPNRNQLG-GYPYSFGRVGSYLNGYNQGYNPTSVGGYGLRSDGRFSPVTVGRS 241
           VPKE SP P+R+ LG GY Y   RV + LNGY QG+NP +VGGYGLR DGRFSPV  GRS
Sbjct: 184 VPKELSPGPSRSPLGAGYSYGVNRVNNLLNGYAQGFNPAAVGGYGLRMDGRFSPVGAGRS 243

Query: 242 GLSPISPGYGIGLNLDTGLNPNYGTGPNVSSNLSYGRVMSPSYGGNLNRYGSPNPMVYGG 301
           G +  S GYG+ +N D GL   +  G N + N+ YGR MSP Y GN NR+G P     GG
Sbjct: 244 GFANYSSGYGMNVNFDQGLPTGFTGGTNYNGNVDYGRGMSPYYIGNTNRFG-PAVGYEGG 303

Query: 302 GGGGNGSILSSSVQNLWGNVG----NSAGTNSSHLRTFPG--SGGVHTGTNSLNSIGGLW 361
            GGGN S  SS  +NLWGN G    N+  TNS+   T+ G  S G +T +    + G  W
Sbjct: 304 NGGGNSSFFSSVTRNLWGNNGGLNYNNNNTNSNS-NTYMGGSSSGNNTLSGPFGNSGVNW 363

Query: 362 GASVSLGHGENAGSPFNTANLDFGSGDASFTSGTTVGYARSIGTN----VSSASLYSAPN 421
           GA    G G NA S  N      G+G++ F  GT    AR+ G N     SS S  SA N
Sbjct: 364 GAP---GGGNNAVSNENVKFGYGGNGESGFGLGTGGYAARNPGANKAAPSSSFSSASATN 423

Query: 422 I--YD-----EVHGNNDEGNTFYGHSSWQLLPTELEDSSSIGFGLGNA--ASDVISRNNA 477
              YD     E +GN       Y   +W+    E E  +   +G+G    +SDV +R+++
Sbjct: 424 NTGYDTAGLAEFYGN----GAVYSDPTWRSPTPETEGPAPFSYGIGGGVPSSDVSARSSS 483

[Close]

BLAST of HG10021623 vs. TAIR 10
Match: AT3G07810.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 458.0 bits (1177), Expect = 1.0e-128
Identity = 281/497 (56.54%), Postives = 334/497 (67.20%), Query Frame = 0


Query: 2   DPGKLFIGGISWDTDEDRLREYFQSFGEVVEVMIMRDRTTGRARGFGFVVFADPVVAARV 61
           D GKLFIGGISWDT+E+RL+EYF SFGEV+E +I++DRTTGRARGFGFVVFADP VA  V
Sbjct: 4   DNGKLFIGGISWDTNEERLKEYFSSFGEVIEAVILKDRTTGRARGFGFVVFADPAVAEIV 63

Query: 62  VLEKHVIDGRTVEAKKAVPRDDQNILSR-NNTGILGSP-GPTRTKKIFVGGLASTVTESD 121
           + EKH IDGR VEAKKAVPRDDQN+++R N++ I GSP GP RT+KIFVGGL S+VTESD
Sbjct: 64  ITEKHNIDGRLVEAKKAVPRDDQNMVNRSNSSSIQGSPGGPGRTRKIFVGGLPSSVTESD 123

Query: 122 FKKYFDQFGTIVDVVVMYDHNTQRPRGFGFITYESEESVEKVLYKTFHELNGKMVEVKRA 181
           FK YF+QFGT  DVVVMYDHNTQRPRGFGFITY+SEE+VEKVL KTFHELNGKMVEVKRA
Sbjct: 124 FKTYFEQFGTTTDVVVMYDHNTQRPRGFGFITYDSEEAVEKVLLKTFHELNGKMVEVKRA 183

Query: 182 VPKESSPVPNRNQLG-GYPYSFGRVGSYLNGYNQGYNPTSVGGYGLRSDGRFSPVTVGRS 241
           VPKE SP P+R+ LG GY Y   RV + LNGY QG+NP +VGGYGLR DGRFSPV  GRS
Sbjct: 184 VPKELSPGPSRSPLGAGYSYGVNRVNNLLNGYAQGFNPAAVGGYGLRMDGRFSPVGAGRS 243

Query: 242 GLSPISPGYGIGLNLDTGLNPNYGTGPNVSSNLSYGRVMSPSYGGNLNRYGSPNPMVYGG 301
           G +  S GYG+ +N D GL   +  G N + N+ YGR MSP Y GN NR+G P     GG
Sbjct: 244 GFANYSSGYGMNVNFDQGLPTGFTGGTNYNGNVDYGRGMSPYYIGNTNRFG-PAVGYEGG 303

Query: 302 GGGGNGSILSSSVQNLWGNVG----NSAGTNSSHLRTFPG--SGGVHTGTNSLNSIGGLW 361
            GGGN S  SS  +NLWGN G    N+  TNS+   T+ G  S G +T +    + G  W
Sbjct: 304 NGGGNSSFFSSVTRNLWGNNGGLNYNNNNTNSNS-NTYMGGSSSGNNTLSGPFGNSGVNW 363

Query: 362 GASVSLGHGENAGSPFNTANLDFGSGDASFTSGTTVGYARSIGTN----VSSASLYSAPN 421
           GA    G G NA S  N      G+G++ F  GT    AR+ G N     SS S  SA N
Sbjct: 364 GAP---GGGNNAVSNENVKFGYGGNGESGFGLGTGGYAARNPGANKAAPSSSFSSASATN 423

Query: 422 I--YD-----EVHGNNDEGNTFYGHSSWQLLPTELEDSSSIGFGLGNA--ASDVISRNNA 476
              YD     E +GN       Y   +W+    E E  +   +G+G    +SDV +R+++
Sbjct: 424 NTGYDTAGLAEFYGN----GAVYSDPTWRSPTPETEGPAPFSYGIGGGVPSSDVSARSSS 483

[Close]

BLAST of HG10021623 vs. TAIR 10
Match: AT5G47620.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 388.7 bits (997), Expect = 7.7e-108
Identity = 238/480 (49.58%), Postives = 298/480 (62.08%), Query Frame = 0


Query: 1   MDPGKLFIGGISWDTDEDRLREYFQSFGEVVEVMIMRDRTTGRARGFGFVVFADPVVAAR 60
           M+  KLFIGGISW+T EDRLR+YF SFGEV+E +IM+DR TGRARGFGFVVFADP VA R
Sbjct: 3   MESCKLFIGGISWETSEDRLRDYFHSFGEVLEAVIMKDRATGRARGFGFVVFADPNVAER 62

Query: 61  VVLEKHVIDGRTVEAKKAVPRDDQNILSRNNTGILGSPGPTRTKKIFVGGLASTVTESDF 120
           VVL KH+IDG+ VEAKKAVPRDD  + +++N+ + GSPGP+ +KKIFVGGLAS+VTE++F
Sbjct: 63  VVLLKHIIDGKIVEAKKAVPRDDHVVFNKSNSSLQGSPGPSNSKKIFVGGLASSVTEAEF 122

Query: 121 KKYFDQFGTIVDVVVMYDHNTQRPRGFGFITYESEESVEKVLYKTFHELNGKMVEVKRAV 180
           KKYF QFG I DVVVMYDH TQRPRGFGFI+Y+SEE+V+KVL KTFHELNGKMVEVK AV
Sbjct: 123 KKYFAQFGMITDVVVMYDHRTQRPRGFGFISYDSEEAVDKVLQKTFHELNGKMVEVKLAV 182

Query: 181 PKESSPVPNRNQLGGYPYSFGRVGSYLNGYNQGYNPTSVGGYGLRSDGRFSPVTVGRSGL 240
           PK+ +    RNQ+    +   R+ S LN Y QG++P+ + GYG++ + R+SP    R G 
Sbjct: 183 PKDMALNTMRNQMNVNSFGTSRISSLLNEYTQGFSPSPISGYGVKPEVRYSPAVGNRGGF 242

Query: 241 SPISPGYGIGLNLDTGLNPNYGTGPNVSSNLSYGRVMSPSYGGNLNRYGSPNPMVYGGGG 300
           SP   GYGI LN +     NYG+G    S+  +GR  SP Y  +L R+GS   M  GG  
Sbjct: 243 SPFGHGYGIELNFEPNQTQNYGSG----SSGGFGRPFSPGYAASLGRFGS--QMESGGAS 302

Query: 301 GGNGSILSSSVQN-LWGNVGNSAGTNSSHLR-TFPGSGGVHTGTNSLNSIGGLWGA---S 360
            GNGS+L+++ +N LWGN G    +NS   R +F G+ G+    +SL SIG  WG    +
Sbjct: 303 VGNGSVLNAAPKNHLWGNGGLGYMSNSPISRSSFSGNSGM----SSLGSIGDNWGTVARA 362

Query: 361 VSLGHGENAGSPFNTANLDFGSGDASFTSGTTVGYARSIGTNVSSASLYSAPNIYDEVHG 420
            S  HGE  G                      VG     G +V   S  S  +I      
Sbjct: 363 RSSYHGERGG----------------------VGLEAMRGVHVGGYS--SGSSIL----- 422

Query: 421 NNDEGNTFYGHSSWQLLPTELEDSSSIGFGLGNAASDVISRNNAGYTVGYGVSNRQSNRG 476
              E ++ Y  S W  LP + E+      GLG    D +SR  AGY       NRQ N G
Sbjct: 423 ---EADSLYSDSMWLSLPAKAEE------GLGMGPLDFMSRGPAGYI------NRQPNGG 428

[Close]

BLAST of HG10021623 vs. TAIR 10
Match: AT5G47620.2 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 388.7 bits (997), Expect = 7.7e-108
Identity = 238/480 (49.58%), Postives = 298/480 (62.08%), Query Frame = 0


Query: 1   MDPGKLFIGGISWDTDEDRLREYFQSFGEVVEVMIMRDRTTGRARGFGFVVFADPVVAAR 60
           M+  KLFIGGISW+T EDRLR+YF SFGEV+E +IM+DR TGRARGFGFVVFADP VA R
Sbjct: 3   MESCKLFIGGISWETSEDRLRDYFHSFGEVLEAVIMKDRATGRARGFGFVVFADPNVAER 62

Query: 61  VVLEKHVIDGRTVEAKKAVPRDDQNILSRNNTGILGSPGPTRTKKIFVGGLASTVTESDF 120
           VVL KH+IDG+ VEAKKAVPRDD  + +++N+ + GSPGP+ +KKIFVGGLAS+VTE++F
Sbjct: 63  VVLLKHIIDGKIVEAKKAVPRDDHVVFNKSNSSLQGSPGPSNSKKIFVGGLASSVTEAEF 122

Query: 121 KKYFDQFGTIVDVVVMYDHNTQRPRGFGFITYESEESVEKVLYKTFHELNGKMVEVKRAV 180
           KKYF QFG I DVVVMYDH TQRPRGFGFI+Y+SEE+V+KVL KTFHELNGKMVEVK AV
Sbjct: 123 KKYFAQFGMITDVVVMYDHRTQRPRGFGFISYDSEEAVDKVLQKTFHELNGKMVEVKLAV 182

Query: 181 PKESSPVPNRNQLGGYPYSFGRVGSYLNGYNQGYNPTSVGGYGLRSDGRFSPVTVGRSGL 240
           PK+ +    RNQ+    +   R+ S LN Y QG++P+ + GYG++ + R+SP    R G 
Sbjct: 183 PKDMALNTMRNQMNVNSFGTSRISSLLNEYTQGFSPSPISGYGVKPEVRYSPAVGNRGGF 242

Query: 241 SPISPGYGIGLNLDTGLNPNYGTGPNVSSNLSYGRVMSPSYGGNLNRYGSPNPMVYGGGG 300
           SP   GYGI LN +     NYG+G    S+  +GR  SP Y  +L R+GS   M  GG  
Sbjct: 243 SPFGHGYGIELNFEPNQTQNYGSG----SSGGFGRPFSPGYAASLGRFGS--QMESGGAS 302

Query: 301 GGNGSILSSSVQN-LWGNVGNSAGTNSSHLR-TFPGSGGVHTGTNSLNSIGGLWGA---S 360
            GNGS+L+++ +N LWGN G    +NS   R +F G+ G+    +SL SIG  WG    +
Sbjct: 303 VGNGSVLNAAPKNHLWGNGGLGYMSNSPISRSSFSGNSGM----SSLGSIGDNWGTVARA 362

Query: 361 VSLGHGENAGSPFNTANLDFGSGDASFTSGTTVGYARSIGTNVSSASLYSAPNIYDEVHG 420
            S  HGE  G                      VG     G +V   S  S  +I      
Sbjct: 363 RSSYHGERGG----------------------VGLEAMRGVHVGGYS--SGSSIL----- 422

Query: 421 NNDEGNTFYGHSSWQLLPTELEDSSSIGFGLGNAASDVISRNNAGYTVGYGVSNRQSNRG 476
              E ++ Y  S W  LP + E+      GLG    D +SR  AGY       NRQ N G
Sbjct: 423 ---EADSLYSDSMWLSLPAKAEE------GLGMGPLDFMSRGPAGYI------NRQPNGG 428

[Close]

BLAST of HG10021623 vs. TAIR 10
Match: AT5G47620.4 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 376.3 bits (965), Expect = 3.9e-104
Identity = 238/502 (47.41%), Postives = 298/502 (59.36%), Query Frame = 0


Query: 1   MDPGKLFIGGISWDTDEDRLREYFQSFGEVVEVMIMRDRTTGRARGFGFVVFADPVVAAR 60
           M+  KLFIGGISW+T EDRLR+YF SFGEV+E +IM+DR TGRARGFGFVVFADP VA R
Sbjct: 3   MESCKLFIGGISWETSEDRLRDYFHSFGEVLEAVIMKDRATGRARGFGFVVFADPNVAER 62

Query: 61  VVLEKHVIDGR----------------------TVEAKKAVPRDDQNILSRNNTGILGSP 120
           VVL KH+IDG+                       VEAKKAVPRDD  + +++N+ + GSP
Sbjct: 63  VVLLKHIIDGKILVDSIVYNQLCRSDKCISLSEVVEAKKAVPRDDHVVFNKSNSSLQGSP 122

Query: 121 GPTRTKKIFVGGLASTVTESDFKKYFDQFGTIVDVVVMYDHNTQRPRGFGFITYESEESV 180
           GP+ +KKIFVGGLAS+VTE++FKKYF QFG I DVVVMYDH TQRPRGFGFI+Y+SEE+V
Sbjct: 123 GPSNSKKIFVGGLASSVTEAEFKKYFAQFGMITDVVVMYDHRTQRPRGFGFISYDSEEAV 182

Query: 181 EKVLYKTFHELNGKMVEVKRAVPKESSPVPNRNQLGGYPYSFGRVGSYLNGYNQGYNPTS 240
           +KVL KTFHELNGKMVEVK AVPK+ +    RNQ+    +   R+ S LN Y QG++P+ 
Sbjct: 183 DKVLQKTFHELNGKMVEVKLAVPKDMALNTMRNQMNVNSFGTSRISSLLNEYTQGFSPSP 242

Query: 241 VGGYGLRSDGRFSPVTVGRSGLSPISPGYGIGLNLDTGLNPNYGTGPNVSSNLSYGRVMS 300
           + GYG++ + R+SP    R G SP   GYGI LN +     NYG+G    S+  +GR  S
Sbjct: 243 ISGYGVKPEVRYSPAVGNRGGFSPFGHGYGIELNFEPNQTQNYGSG----SSGGFGRPFS 302

Query: 301 PSYGGNLNRYGSPNPMVYGGGGGGNGSILSSSVQN-LWGNVGNSAGTNSSHLR-TFPGSG 360
           P Y  +L R+GS   M  GG   GNGS+L+++ +N LWGN G    +NS   R +F G+ 
Sbjct: 303 PGYAASLGRFGS--QMESGGASVGNGSVLNAAPKNHLWGNGGLGYMSNSPISRSSFSGNS 362

Query: 361 GVHTGTNSLNSIGGLWGA---SVSLGHGENAGSPFNTANLDFGSGDASFTSGTTVGYARS 420
           G+    +SL SIG  WG    + S  HGE  G                      VG    
Sbjct: 363 GM----SSLGSIGDNWGTVARARSSYHGERGG----------------------VGLEAM 422

Query: 421 IGTNVSSASLYSAPNIYDEVHGNNDEGNTFYGHSSWQLLPTELEDSSSIGFGLGNAASDV 476
            G +V   S  S  +I         E ++ Y  S W  LP + E+      GLG    D 
Sbjct: 423 RGVHVGGYS--SGSSIL--------EADSLYSDSMWLSLPAKAEE------GLGMGPLDF 450

The following BLAST results are available for this feature:

BLAST of HG10021623 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038894700.1	5.8e-267	98.53	heterogeneous nuclear ribonucleoprotein 1 [Benincasa hispida] >XP_038894701.1 he...	[more]
XP_008463611.1	3.7e-261	96.42	PREDICTED: heterogeneous nuclear ribonucleoprotein 1 [Cucumis melo]	[more]
KAA0035665.1	3.7e-261	96.42	heterogeneous nuclear ribonucleoprotein 1 [Cucumis melo var. makuwa] >TYK30878.1...	[more]
XP_022142553.1	1.8e-260	95.79	heterogeneous nuclear ribonucleoprotein 1 [Momordica charantia] >XP_022142555.1 ...	[more]
XP_031745329.1	3.2e-257	95.16	heterogeneous nuclear ribonucleoprotein 1-like [Cucumis sativus] >KGN65038.1 hyp...	[more]

BLAST of HG10021623 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8W034	4.4e-60	37.97	Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis thaliana OX=3702 GN=RNP...	[more]
Q96DH6	7.9e-49	40.00	RNA-binding protein Musashi homolog 2 OS=Homo sapiens OX=9606 GN=MSI2 PE=1 SV=1	[more]
Q920Q6	1.6e-46	38.46	RNA-binding protein Musashi homolog 2 OS=Mus musculus OX=10090 GN=Msi2 PE=1 SV=1	[more]
Q9VVE5	5.8e-44	49.73	RNA-binding protein Musashi homolog Rbp6 OS=Drosophila melanogaster OX=7227 GN=R...	[more]
Q98SJ2	1.0e-43	38.91	DAZ-associated protein 1 OS=Xenopus laevis OX=8355 GN=dazap1 PE=1 SV=1	[more]

BLAST of HG10021623 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3E516	1.8e-261	96.42	Heterogeneous nuclear ribonucleoprotein 1 OS=Cucumis melo var. makuwa OX=1194695...	[more]
A0A1S3CK54	1.8e-261	96.42	heterogeneous nuclear ribonucleoprotein 1 OS=Cucumis melo OX=3656 GN=LOC10350172...	[more]
A0A6J1CL94	8.8e-261	95.79	heterogeneous nuclear ribonucleoprotein 1 OS=Momordica charantia OX=3673 GN=LOC1...	[more]
A0A0A0LTE8	1.5e-257	95.16	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G181500 PE=4 SV=1	[more]
A0A6J1EKS0	2.9e-256	94.32	heterogeneous nuclear ribonucleoprotein 1-like isoform X1 OS=Cucurbita moschata ...	[more]

BLAST of HG10021623 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G07810.2	2.7e-129	56.63	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT3G07810.1	1.0e-128	56.54	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT5G47620.1	7.7e-108	49.58	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT5G47620.2	7.7e-108	49.58	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT5G47620.4	3.9e-104	47.41	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 105..177 e-value: 1.8E-24 score: 97.3 coord: 5..76 e-value: 1.2E-22 score: 91.2
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 106..164 e-value: 1.5E-16 score: 59.9 coord: 6..71 e-value: 3.4E-15 score: 55.6
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 4..80 score: 17.847509
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 104..181 score: 17.966896
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 101..190 e-value: 6.0E-27 score: 95.7
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 3..86 e-value: 1.5E-26 score: 94.4
None	No IPR available	PANTHER	PTHR48032	RNA-BINDING PROTEIN MUSASHI HOMOLOG RBP6	coord: 1..476
None	No IPR available	PANTHER	PTHR48032:SF1	HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN 1-LIKE	coord: 1..476
None	No IPR available	CDD	cd12325	RRM1_hnRNPA_hnRNPD_like	coord: 6..76 e-value: 7.00239E-36 score: 126.161
IPR034131	DAZ-associated protein 1, RNA recognition motif 2	CDD	cd12327	RRM2_DAZAP1	coord: 102..181 e-value: 2.53913E-47 score: 157.142
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 100..202
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 3..99

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10021623.1	HG10021623.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003676	nucleic acid binding