HG10021606 (gene) Bottle gourd (Hangzhou Gourd) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGCAGATCATTACGATCTCACTCTGTAGTTGCCACGGCGGTGATTCTGATGACCTTCGTCTGGCTGACGAGGGTTTACCCGGCGGACGGCGAGGCATGCGGCGACTGCATCAGGGACAAGATGGAGCTGGAGTGCCCGGCGTGCGCTCCACCCCTGCGTTGCATGGCACAGTGCCTGTGGGGCGGCGGTTCAAGGTCGAGGTGCGTTAAACGGTGTGATTGCGGCGGCGCGTGGGCGAGCTTGTCAACCTGCAGGCAATGCATGTCCAGATGCAAGTGCAACTGCAGTTCTTCGAGCGTGTAA ATGGGCAGATCATTACGATCTCACTCTGTAGTTGCCACGGCGGTGATTCTGATGACCTTCGTCTGGCTGACGAGGGTTTACCCGGCGGACGGCGAGGCATGCGGCGACTGCATCAGGGACAAGATGGAGCTGGAGTGCCCGGCGTGCGCTCCACCCCTGCGTTGCATGGCACAGTGCCTGTGGGGCGGCGGTTCAAGGTCGAGGTGCGTTAAACGGTGTGATTGCGGCGGCGCGTGGGCGAGCTTGTCAACCTGCAGGCAATGCATGTCCAGATGCAAGTGCAACTGCAGTTCTTCGAGCGTGTAA ATGGGCAGATCATTACGATCTCACTCTGTAGTTGCCACGGCGGTGATTCTGATGACCTTCGTCTGGCTGACGAGGGTTTACCCGGCGGACGGCGAGGCATGCGGCGACTGCATCAGGGACAAGATGGAGCTGGAGTGCCCGGCGTGCGCTCCACCCCTGCGTTGCATGGCACAGTGCCTGTGGGGCGGCGGTTCAAGGTCGAGGTGCGTTAAACGGTGTGATTGCGGCGGCGCGTGGGCGAGCTTGTCAACCTGCAGGCAATGCATGTCCAGATGCAAGTGCAACTGCAGTTCTTCGAGCGTGTAA MGRSLRSHSVVATAVILMTFVWLTRVYPADGEACGDCIRDKMELECPACAPPLRCMAQCLWGGGSRSRCVKRCDCGGAWASLSTCRQCMSRCKCNCSSSSV Homology
BLAST of HG10021606 vs. NCBI nr
Match: KAG6573550.1 (hypothetical protein SDJN03_27437, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 149.1 bits (375), Expect = 2.1e-32 Identity = 69/100 (69.00%), Postives = 80/100 (80.00%), Query Frame = 0
BLAST of HG10021606 vs. NCBI nr
Match: KAG6573554.1 (hypothetical protein SDJN03_27441, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 144.8 bits (364), Expect = 4.0e-31 Identity = 68/100 (68.00%), Postives = 78/100 (78.00%), Query Frame = 0
BLAST of HG10021606 vs. NCBI nr
Match: KAG7012656.1 (hypothetical protein SDJN02_25409, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 139.4 bits (350), Expect = 1.7e-29 Identity = 63/92 (68.48%), Postives = 74/92 (80.43%), Query Frame = 0
BLAST of HG10021606 vs. NCBI nr
Match: XP_015878661.1 (uncharacterized protein LOC107414952 [Ziziphus jujuba]) HSP 1 Score: 107.1 bits (266), Expect = 9.2e-20 Identity = 47/86 (54.65%), Postives = 59/86 (68.60%), Query Frame = 0
BLAST of HG10021606 vs. NCBI nr
Match: RVX08004.1 (hypothetical protein CK203_014623 [Vitis vinifera]) HSP 1 Score: 105.5 bits (262), Expect = 2.7e-19 Identity = 49/94 (52.13%), Postives = 63/94 (67.02%), Query Frame = 0
BLAST of HG10021606 vs. ExPASy TrEMBL
Match: A0A0A0LW71 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G186620 PE=4 SV=1) HSP 1 Score: 145.2 bits (365), Expect = 1.5e-31 Identity = 64/90 (71.11%), Postives = 76/90 (84.44%), Query Frame = 0
BLAST of HG10021606 vs. ExPASy TrEMBL
Match: A0A6P3ZGK3 (uncharacterized protein LOC107414952 OS=Ziziphus jujuba OX=326968 GN=LOC107414952 PE=4 SV=1) HSP 1 Score: 107.1 bits (266), Expect = 4.5e-20 Identity = 47/86 (54.65%), Postives = 59/86 (68.60%), Query Frame = 0
BLAST of HG10021606 vs. ExPASy TrEMBL
Match: A0A438FE46 (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=CK203_111219 PE=4 SV=1) HSP 1 Score: 105.5 bits (262), Expect = 1.3e-19 Identity = 49/94 (52.13%), Postives = 64/94 (68.09%), Query Frame = 0
BLAST of HG10021606 vs. ExPASy TrEMBL
Match: A0A438JGC2 (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=CK203_014623 PE=4 SV=1) HSP 1 Score: 105.5 bits (262), Expect = 1.3e-19 Identity = 49/94 (52.13%), Postives = 63/94 (67.02%), Query Frame = 0
BLAST of HG10021606 vs. ExPASy TrEMBL
Match: A0A2C9URU5 (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_13G107300 PE=4 SV=1) HSP 1 Score: 104.8 bits (260), Expect = 2.2e-19 Identity = 46/89 (51.69%), Postives = 61/89 (68.54%), Query Frame = 0
BLAST of HG10021606 vs. TAIR 10
Match: AT1G12064.1 (unknown protein; LOCATED IN: endomembrane system; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 78.2 bits (191), Expect = 4.3e-15 Identity = 36/109 (33.03%), Postives = 64/109 (58.72%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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