HG10021579 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10021579
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	RPM1-interacting protein 4-like
Location	Chr05: 11790863 .. 11791802 (+)
RNA-Seq Expression	HG10021579
Synteny	HG10021579

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTCCTCTCTTCTACAATACAAACTCTTCCAAATTCCGCCGTTGCCGTCGCCATTGCCGCCGCAGCAGCAACCACGGAGCTGCCACAGCTCATGGCAGTGAGTGTTTTTTCTTTTTTTTTTCATCAACACAAAACCAAAATAAAATTCATCAATTACCATCTCAAATTAAAATCATATCGTGGAATTAATTACTAATTAGAAGAATGAAATTTGTATTAATAATCTTCAATTAATTAATTAATCTAATGGGCAGGGGCCAAAATCGTCATCTCACGTTCCGAAATTCGGCAATTGGGATTCCGATGACGTACCGTACACCATCTGTTTCGAAAACGCCCGTGAACTCCGAGCCGCCGGCGTCACCTTCGATCCCAACGATCCCGACACCTACCCGCCGGCCACCGTCGTAAACCAAAAACCAATCCCAGCCGACAACCGCCGTCATCATGATGGCGGAGATTACCATCAGAGGCGAGCGATGGGAAACTCGGGATCGGAGAAATTGAGCAGTGAGAGAAGCGGTTCGGATTATGCGCTTCTGAAAGAGGCTAAGCAGAGTGGGAGGAAGAAGAAAAATAGTATTGGAGCGGAAGGAATGAGTAGATTTACTCCGACGACGACGGTGGGCGGAAAGGGTAATCGGAACCCTAGGGTTCGACGGAATAATGAAGGGGAAATGATAGCGTCGGTGCCGAAATTTGGGAGCTGGGATGTGAGGGATCCGAAATCGGGAGATGGATATACGGCGATTTTCAATAAAGTAAAGATTGAGAAGGAAATTGGAGGTTCTAATAATCCTCAAGCCGTTCCGCCATTGATGAATCAAACCAAGCAATTACCAATTGCTCAAACTACTACTGCTACTAATACTCATGGATCCACTTCATTTGCTTCCAAGGTACCTCTTATTCGTCTTTCTATACATTTAAATTTCTAA

mRNA sequence

ATGTTCCTCTCTTCTACAATACAAACTCTTCCAAATTCCGCCGTTGCCGTCGCCATTGCCGCCGCAGCAGCAACCACGGAGCTGCCACAGCTCATGGCAGGGCCAAAATCGTCATCTCACGTTCCGAAATTCGGCAATTGGGATTCCGATGACGTACCGTACACCATCTGTTTCGAAAACGCCCGTGAACTCCGAGCCGCCGGCGTCACCTTCGATCCCAACGATCCCGACACCTACCCGCCGGCCACCGTCGTAAACCAAAAACCAATCCCAGCCGACAACCGCCGTCATCATGATGGCGGAGATTACCATCAGAGGCGAGCGATGGGAAACTCGGGATCGGAGAAATTGAGCAGTGAGAGAAGCGGTTCGGATTATGCGCTTCTGAAAGAGGCTAAGCAGAGTGGGAGGAAGAAGAAAAATAGTATTGGAGCGGAAGGAATGAGTAGATTTACTCCGACGACGACGGTGGGCGGAAAGGGTAATCGGAACCCTAGGGTTCGACGGAATAATGAAGGGGAAATGATAGCGTCGGTGCCGAAATTTGGGAGCTGGGATGTGAGGGATCCGAAATCGGGAGATGGATATACGGCGATTTTCAATAAAGTAAAGATTGAGAAGGAAATTGGAGGTTCTAATAATCCTCAAGCCGTTCCGCCATTGATGAATCAAACCAAGCAATTACCAATTGCTCAAACTACTACTGCTACTAATACTCATGGATCCACTTCATTTGCTTCCAAGGTACCTCTTATTCGTCTTTCTATACATTTAAATTTCTAA

Coding sequence (CDS)

ATGTTCCTCTCTTCTACAATACAAACTCTTCCAAATTCCGCCGTTGCCGTCGCCATTGCCGCCGCAGCAGCAACCACGGAGCTGCCACAGCTCATGGCAGGGCCAAAATCGTCATCTCACGTTCCGAAATTCGGCAATTGGGATTCCGATGACGTACCGTACACCATCTGTTTCGAAAACGCCCGTGAACTCCGAGCCGCCGGCGTCACCTTCGATCCCAACGATCCCGACACCTACCCGCCGGCCACCGTCGTAAACCAAAAACCAATCCCAGCCGACAACCGCCGTCATCATGATGGCGGAGATTACCATCAGAGGCGAGCGATGGGAAACTCGGGATCGGAGAAATTGAGCAGTGAGAGAAGCGGTTCGGATTATGCGCTTCTGAAAGAGGCTAAGCAGAGTGGGAGGAAGAAGAAAAATAGTATTGGAGCGGAAGGAATGAGTAGATTTACTCCGACGACGACGGTGGGCGGAAAGGGTAATCGGAACCCTAGGGTTCGACGGAATAATGAAGGGGAAATGATAGCGTCGGTGCCGAAATTTGGGAGCTGGGATGTGAGGGATCCGAAATCGGGAGATGGATATACGGCGATTTTCAATAAAGTAAAGATTGAGAAGGAAATTGGAGGTTCTAATAATCCTCAAGCCGTTCCGCCATTGATGAATCAAACCAAGCAATTACCAATTGCTCAAACTACTACTGCTACTAATACTCATGGATCCACTTCATTTGCTTCCAAGGTACCTCTTATTCGTCTTTCTATACATTTAAATTTCTAA

Protein sequence

MFLSSTIQTLPNSAVAVAIAAAAATTELPQLMAGPKSSSHVPKFGNWDSDDVPYTICFENARELRAAGVTFDPNDPDTYPPATVVNQKPIPADNRRHHDGGDYHQRRAMGNSGSEKLSSERSGSDYALLKEAKQSGRKKKNSIGAEGMSRFTPTTTVGGKGNRNPRVRRNNEGEMIASVPKFGSWDVRDPKSGDGYTAIFNKVKIEKEIGGSNNPQAVPPLMNQTKQLPIAQTTTATNTHGSTSFASKVPLIRLSIHLNF

Homology

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BLAST of HG10021579 vs. NCBI nr
Match: XP_038895247.1 (RPM1-interacting protein 4-like isoform X1 [Benincasa hispida])

HSP 1 Score: 382.1 bits (980), Expect = 3.8e-102
Identity = 197/232 (84.91%), Postives = 204/232 (87.93%), Query Frame = 0


Query: 32  MAGPKSSSHVPKFGNWDSDDVPYTICFENARELRAAGVTFDPNDPDTYPPATVVNQKPIP 91
           MAG KSSSHVPKFGNWDSDDVPYTICFENARELRAAGV FDPNDPDTYPPA V+NQ   P
Sbjct: 1   MAGAKSSSHVPKFGNWDSDDVPYTICFENARELRAAGVDFDPNDPDTYPPAAVINQNSTP 60

Query: 92  ADNRRHHDGGDYHQRRAMGNSGSEKLSSERSGSDYALLKEAKQSGRKKKNSIGAEGMSRF 151
           AD+R     GDYHQRR MGNSGSEKLSSERSGSDYALLKEAKQSGRKKK+S GAEGMSRF
Sbjct: 61  ADHR-----GDYHQRREMGNSGSEKLSSERSGSDYALLKEAKQSGRKKKHSNGAEGMSRF 120

Query: 152 TPTTTV---GGKGNRNPRVRRNNEGEMIASVPKFGSWDVRDPKSGDGYTAIFNKVKIEKE 211
           TPTTTV   GGKGNRNPRVRRN+EGEM+ASVPKFGSWDVRDPKSGDGYTAIFNKVKIEK+
Sbjct: 121 TPTTTVSGHGGKGNRNPRVRRNDEGEMMASVPKFGSWDVRDPKSGDGYTAIFNKVKIEKQ 180

Query: 212 IGGSNNPQAVPPLMNQTKQLPIAQTTTATNTHGSTSFASKVPLIRLSIHLNF 261
           IGGSNNPQAVPPLMNQTK+LPIAQTTT   THGS SF SKV LI      NF
Sbjct: 181 IGGSNNPQAVPPLMNQTKKLPIAQTTTTATTHGSNSFVSKV-LITFCFLSNF 226

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BLAST of HG10021579 vs. NCBI nr
Match: XP_038895249.1 (RPM1-interacting protein 4-like isoform X2 [Benincasa hispida])

HSP 1 Score: 381.7 bits (979), Expect = 5.0e-102
Identity = 192/221 (86.88%), Postives = 200/221 (90.50%), Query Frame = 0


Query: 32  MAGPKSSSHVPKFGNWDSDDVPYTICFENARELRAAGVTFDPNDPDTYPPATVVNQKPIP 91
           MAG KSSSHVPKFGNWDSDDVPYTICFENARELRAAGV FDPNDPDTYPPA V+NQ   P
Sbjct: 1   MAGAKSSSHVPKFGNWDSDDVPYTICFENARELRAAGVDFDPNDPDTYPPAAVINQNSTP 60

Query: 92  ADNRRHHDGGDYHQRRAMGNSGSEKLSSERSGSDYALLKEAKQSGRKKKNSIGAEGMSRF 151
           AD+R     GDYHQRR MGNSGSEKLSSERSGSDYALLKEAKQSGRKKK+S GAEGMSRF
Sbjct: 61  ADHR-----GDYHQRREMGNSGSEKLSSERSGSDYALLKEAKQSGRKKKHSNGAEGMSRF 120

Query: 152 TPTTTV---GGKGNRNPRVRRNNEGEMIASVPKFGSWDVRDPKSGDGYTAIFNKVKIEKE 211
           TPTTTV   GGKGNRNPRVRRN+EGEM+ASVPKFGSWDVRDPKSGDGYTAIFNKVKIEK+
Sbjct: 121 TPTTTVSGHGGKGNRNPRVRRNDEGEMMASVPKFGSWDVRDPKSGDGYTAIFNKVKIEKQ 180

Query: 212 IGGSNNPQAVPPLMNQTKQLPIAQTTTATNTHGSTSFASKV 250
           IGGSNNPQAVPPLMNQTK+LPIAQTTT   THGS SF SK+
Sbjct: 181 IGGSNNPQAVPPLMNQTKKLPIAQTTTTATTHGSNSFVSKI 216

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BLAST of HG10021579 vs. NCBI nr
Match: KAA0054298.1 (RPM1-interacting protein 4-like [Cucumis melo var. makuwa] >TYK12335.1 RPM1-interacting protein 4-like [Cucumis melo var. makuwa])

HSP 1 Score: 359.4 bits (921), Expect = 2.7e-95
Identity = 188/227 (82.82%), Postives = 197/227 (86.78%), Query Frame = 0


Query: 32  MAGPKSSSHVPKFGNWDSDDVPYTICFENARELRAAGVTFDPNDPDTYPPATVVNQKPIP 91
           MAG KSSSHVPKFGNWDSDDVPYTI FENAREL+AAGVTFDPNDPDTYPPA   NQ  IP
Sbjct: 1   MAGTKSSSHVPKFGNWDSDDVPYTIFFENARELQAAGVTFDPNDPDTYPPAVFANQNSIP 60

Query: 92  ADNRRHHDGGDYHQRRAMGNSGSEKLSSERSGSDYALLKEAKQSGRKKKNSIGAEGMSRF 151
           AD+ RHHDG D HQRR + NSGSEKLSSERS SDYALLK AKQSGRKKKNS GAEGMSRF
Sbjct: 61  ADHHRHHDGEDSHQRREIVNSGSEKLSSERSDSDYALLK-AKQSGRKKKNSNGAEGMSRF 120

Query: 152 TPTTTVGGKGNRNPRVRRNNEGEMIASVPKFGSWDVRDPKSGDGYTAIFNKVKIEKEIGG 211
           +P TTV GKGNRNPRVRRNNEGEM+ASVPKFGSWDVRDPKSGDGYTAIFNKVKIEK+IGG
Sbjct: 121 SP-TTVDGKGNRNPRVRRNNEGEMMASVPKFGSWDVRDPKSGDGYTAIFNKVKIEKQIGG 180

Query: 212 SNNPQAVPPLMNQTKQLPIAQTTTA-TNTHGSTSFASKVPLIRLSIH 258
           SNNPQ VPPLMNQTKQ P+ QTT A T+T GSTSF SKV +     H
Sbjct: 181 SNNPQTVPPLMNQTKQ-PMTQTTVAKTSTQGSTSFVSKVQISEAHHH 224

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BLAST of HG10021579 vs. NCBI nr
Match: XP_008458983.1 (PREDICTED: RPM1-interacting protein 4-like [Cucumis melo])

HSP 1 Score: 357.8 bits (917), Expect = 7.7e-95
Identity = 186/219 (84.93%), Postives = 195/219 (89.04%), Query Frame = 0


Query: 32  MAGPKSSSHVPKFGNWDSDDVPYTICFENARELRAAGVTFDPNDPDTYPPATVVNQKPIP 91
           MAG KSSSHVPKFGNWDSDDVPYTI FENAREL+AAGVTFDPNDPDTYPPA   NQ  IP
Sbjct: 1   MAGTKSSSHVPKFGNWDSDDVPYTIFFENARELQAAGVTFDPNDPDTYPPAVFANQNSIP 60

Query: 92  ADNRRHHDGGDYHQRRAMGNSGSEKLSSERSGSDYALLKEAKQSGRKKKNSIGAEGMSRF 151
           AD+ RHHDG D HQRR + NSGSEKLSSERS SDYALLK AKQSGRKKKNS GAEGMSRF
Sbjct: 61  ADHHRHHDGEDSHQRREIVNSGSEKLSSERSDSDYALLK-AKQSGRKKKNSNGAEGMSRF 120

Query: 152 TPTTTVGGKGNRNPRVRRNNEGEMIASVPKFGSWDVRDPKSGDGYTAIFNKVKIEKEIGG 211
           +P TTV GKGNRNPRVRRNNEGEM+ASVPKFGSWDVRDPKSGDGYTAIFNKVKIEK+IGG
Sbjct: 121 SP-TTVDGKGNRNPRVRRNNEGEMMASVPKFGSWDVRDPKSGDGYTAIFNKVKIEKQIGG 180

Query: 212 SNNPQAVPPLMNQTKQLPIAQTTTA-TNTHGSTSFASKV 250
           SNNPQ VPPLMNQTKQ P+ QTT A T+T GSTSF SK+
Sbjct: 181 SNNPQTVPPLMNQTKQ-PMTQTTVAKTSTQGSTSFVSKI 216

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BLAST of HG10021579 vs. NCBI nr
Match: XP_011660296.1 (RPM1-interacting protein 4 [Cucumis sativus] >KGN66824.1 hypothetical protein Csa_007241 [Cucumis sativus])

HSP 1 Score: 344.4 bits (882), Expect = 8.8e-91
Identity = 177/219 (80.82%), Postives = 193/219 (88.13%), Query Frame = 0


Query: 32  MAGPKSSSHVPKFGNWDSDDVPYTICFENARELRAAGVTFDPNDPDTYPPATVVNQKPIP 91
           MAGPKSSSHVPKFGNWDSDDVPYTI FENAREL+AAG+TFDPNDPDTYPP  V NQ   P
Sbjct: 1   MAGPKSSSHVPKFGNWDSDDVPYTIYFENARELQAAGITFDPNDPDTYPPTAVANQNSSP 60

Query: 92  ADNRRHHDGGDYHQRRAMGNSGSEKLSSERSGSDYALLKEAKQSGRKKKNSIGAEGMSRF 151
           A++ R+HDG D HQRR + NSGSEKLSSERS SDYALLK AKQSGRKKKNS GAEGMSRF
Sbjct: 61  ANHHRYHDGDDSHQRREIVNSGSEKLSSERSDSDYALLK-AKQSGRKKKNSNGAEGMSRF 120

Query: 152 TPTTTVGGKGNRNPRVRRNNEGEMIASVPKFGSWDVRDPKSGDGYTAIFNKVKIEKEIGG 211
           +P  TV GKGNRNPRVRRNNEGEM+ASVPKFGSWDVRDPKSGDGYTAIFNKVKIEK++GG
Sbjct: 121 SP-ATVDGKGNRNPRVRRNNEGEMMASVPKFGSWDVRDPKSGDGYTAIFNKVKIEKQVGG 180

Query: 212 SNNPQAVPPLMNQTKQLPIAQTTTA-TNTHGSTSFASKV 250
           SN+ Q+VP LMNQTKQ PI QTT   +++HGSTSF SK+
Sbjct: 181 SNDTQSVPALMNQTKQ-PITQTTVGKSSSHGSTSFGSKI 216

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BLAST of HG10021579 vs. ExPASy Swiss-Prot
Match: Q8GYN5 (RPM1-interacting protein 4 OS=Arabidopsis thaliana OX=3702 GN=RIN4 PE=1 SV=1)

HSP 1 Score: 86.7 bits (213), Expect = 4.3e-16
Identity = 64/193 (33.16%), Postives = 92/193 (47.67%), Query Frame = 0


Query: 39  SHVPKFGNWDSDD-VPYTICFENARELRAAG-VTFDPNDPD----------TYPPATVVN 98
           S+VPKFGNW++++ VPYT  F+ AR+ RA G    +PNDP+           +PP++   
Sbjct: 4   SNVPKFGNWEAEENVPYTAYFDKARKTRAPGSKIMNPNDPEYNSDSQSQAPPHPPSS--R 63

Query: 99  QKPIPAD----NRRHHDGGDYHQRRAMGNSGSEKLSSERSGSDYALLKEAKQSGRKK--- 158
            KP   D    +R H    +  + +  G++G    S+E +        +      K    
Sbjct: 64  TKPEQVDTVRRSREHMRSREESELKQFGDAGGS--SNEAANKRQGRASQNNSYDNKSPLH 123

Query: 159 KNSIGAEGMSRFTPTTTVGGKGNRNPRVRRNNEGEMIASVPKFGSWDVRDPKSGDGYTAI 213
           KNS    G SR  PT            +R +   E +  VPKFG WD  +P S DGYT I
Sbjct: 124 KNSYDGTGKSRPKPT-----------NLRADESPEKVTVVPKFGDWDENNPSSADGYTHI 181

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BLAST of HG10021579 vs. ExPASy Swiss-Prot
Match: O22633 (Protein NOI4 OS=Arabidopsis thaliana OX=3702 GN=NOI4 PE=1 SV=1)

HSP 1 Score: 51.6 bits (122), Expect = 1.6e-05
Identity = 20/33 (60.61%), Postives = 25/33 (75.76%), Query Frame = 0


Query: 179 VPKFGSWDVRDPKSGDGYTAIFNKVKIEKEIGG 212
           +PKFG WDV DP S +G+T IFNK + EK+ GG
Sbjct: 8   LPKFGEWDVNDPASAEGFTVIFNKARDEKKTGG 40

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BLAST of HG10021579 vs. ExPASy Swiss-Prot
Match: Q8S3M3 (NOI-like protein OS=Elaeis oleifera OX=80265 PE=2 SV=1)

HSP 1 Score: 50.8 bits (120), Expect = 2.6e-05
Identity = 28/73 (38.36%), Postives = 38/73 (52.05%), Query Frame = 0


Query: 39  SHVPKFGNWDSDDVPYTICFENARELRAAG-VTFDPNDPDTYP----PATVVNQKPIPAD 98
           +HVPKFGNWD +++ YT  FE     +  G   F+PNDP+  P    P TV         
Sbjct: 5   AHVPKFGNWDGENISYTTYFETVHRDKGDGSKIFNPNDPEENPQAFYPRTVAQDH---QH 64

Query: 99  NRRHHD--GGDYH 105
           + +HH+    DYH
Sbjct: 65  SEKHHNDTSTDYH 74

[Close]

BLAST of HG10021579 vs. ExPASy TrEMBL
Match: A0A5A7UH42 (RPM1-interacting protein 4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold302G001090 PE=4 SV=1)

HSP 1 Score: 359.4 bits (921), Expect = 1.3e-95
Identity = 188/227 (82.82%), Postives = 197/227 (86.78%), Query Frame = 0


Query: 32  MAGPKSSSHVPKFGNWDSDDVPYTICFENARELRAAGVTFDPNDPDTYPPATVVNQKPIP 91
           MAG KSSSHVPKFGNWDSDDVPYTI FENAREL+AAGVTFDPNDPDTYPPA   NQ  IP
Sbjct: 1   MAGTKSSSHVPKFGNWDSDDVPYTIFFENARELQAAGVTFDPNDPDTYPPAVFANQNSIP 60

Query: 92  ADNRRHHDGGDYHQRRAMGNSGSEKLSSERSGSDYALLKEAKQSGRKKKNSIGAEGMSRF 151
           AD+ RHHDG D HQRR + NSGSEKLSSERS SDYALLK AKQSGRKKKNS GAEGMSRF
Sbjct: 61  ADHHRHHDGEDSHQRREIVNSGSEKLSSERSDSDYALLK-AKQSGRKKKNSNGAEGMSRF 120

Query: 152 TPTTTVGGKGNRNPRVRRNNEGEMIASVPKFGSWDVRDPKSGDGYTAIFNKVKIEKEIGG 211
           +P TTV GKGNRNPRVRRNNEGEM+ASVPKFGSWDVRDPKSGDGYTAIFNKVKIEK+IGG
Sbjct: 121 SP-TTVDGKGNRNPRVRRNNEGEMMASVPKFGSWDVRDPKSGDGYTAIFNKVKIEKQIGG 180

Query: 212 SNNPQAVPPLMNQTKQLPIAQTTTA-TNTHGSTSFASKVPLIRLSIH 258
           SNNPQ VPPLMNQTKQ P+ QTT A T+T GSTSF SKV +     H
Sbjct: 181 SNNPQTVPPLMNQTKQ-PMTQTTVAKTSTQGSTSFVSKVQISEAHHH 224

[Close]

BLAST of HG10021579 vs. ExPASy TrEMBL
Match: A0A1S3C9P5 (RPM1-interacting protein 4-like OS=Cucumis melo OX=3656 GN=LOC103498234 PE=4 SV=1)

HSP 1 Score: 357.8 bits (917), Expect = 3.7e-95
Identity = 186/219 (84.93%), Postives = 195/219 (89.04%), Query Frame = 0


Query: 32  MAGPKSSSHVPKFGNWDSDDVPYTICFENARELRAAGVTFDPNDPDTYPPATVVNQKPIP 91
           MAG KSSSHVPKFGNWDSDDVPYTI FENAREL+AAGVTFDPNDPDTYPPA   NQ  IP
Sbjct: 1   MAGTKSSSHVPKFGNWDSDDVPYTIFFENARELQAAGVTFDPNDPDTYPPAVFANQNSIP 60

Query: 92  ADNRRHHDGGDYHQRRAMGNSGSEKLSSERSGSDYALLKEAKQSGRKKKNSIGAEGMSRF 151
           AD+ RHHDG D HQRR + NSGSEKLSSERS SDYALLK AKQSGRKKKNS GAEGMSRF
Sbjct: 61  ADHHRHHDGEDSHQRREIVNSGSEKLSSERSDSDYALLK-AKQSGRKKKNSNGAEGMSRF 120

Query: 152 TPTTTVGGKGNRNPRVRRNNEGEMIASVPKFGSWDVRDPKSGDGYTAIFNKVKIEKEIGG 211
           +P TTV GKGNRNPRVRRNNEGEM+ASVPKFGSWDVRDPKSGDGYTAIFNKVKIEK+IGG
Sbjct: 121 SP-TTVDGKGNRNPRVRRNNEGEMMASVPKFGSWDVRDPKSGDGYTAIFNKVKIEKQIGG 180

Query: 212 SNNPQAVPPLMNQTKQLPIAQTTTA-TNTHGSTSFASKV 250
           SNNPQ VPPLMNQTKQ P+ QTT A T+T GSTSF SK+
Sbjct: 181 SNNPQTVPPLMNQTKQ-PMTQTTVAKTSTQGSTSFVSKI 216

[Close]

BLAST of HG10021579 vs. ExPASy TrEMBL
Match: A0A0A0M0M0 (AvrRpt-cleavage domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G699040 PE=4 SV=1)

HSP 1 Score: 344.4 bits (882), Expect = 4.3e-91
Identity = 177/219 (80.82%), Postives = 193/219 (88.13%), Query Frame = 0


Query: 32  MAGPKSSSHVPKFGNWDSDDVPYTICFENARELRAAGVTFDPNDPDTYPPATVVNQKPIP 91
           MAGPKSSSHVPKFGNWDSDDVPYTI FENAREL+AAG+TFDPNDPDTYPP  V NQ   P
Sbjct: 1   MAGPKSSSHVPKFGNWDSDDVPYTIYFENARELQAAGITFDPNDPDTYPPTAVANQNSSP 60

Query: 92  ADNRRHHDGGDYHQRRAMGNSGSEKLSSERSGSDYALLKEAKQSGRKKKNSIGAEGMSRF 151
           A++ R+HDG D HQRR + NSGSEKLSSERS SDYALLK AKQSGRKKKNS GAEGMSRF
Sbjct: 61  ANHHRYHDGDDSHQRREIVNSGSEKLSSERSDSDYALLK-AKQSGRKKKNSNGAEGMSRF 120

Query: 152 TPTTTVGGKGNRNPRVRRNNEGEMIASVPKFGSWDVRDPKSGDGYTAIFNKVKIEKEIGG 211
           +P  TV GKGNRNPRVRRNNEGEM+ASVPKFGSWDVRDPKSGDGYTAIFNKVKIEK++GG
Sbjct: 121 SP-ATVDGKGNRNPRVRRNNEGEMMASVPKFGSWDVRDPKSGDGYTAIFNKVKIEKQVGG 180

Query: 212 SNNPQAVPPLMNQTKQLPIAQTTTA-TNTHGSTSFASKV 250
           SN+ Q+VP LMNQTKQ PI QTT   +++HGSTSF SK+
Sbjct: 181 SNDTQSVPALMNQTKQ-PITQTTVGKSSSHGSTSFGSKI 216

[Close]

BLAST of HG10021579 vs. ExPASy TrEMBL
Match: A0A6J1CND0 (RPM1-interacting protein 4-like OS=Momordica charantia OX=3673 GN=LOC111012692 PE=4 SV=1)

HSP 1 Score: 283.5 bits (724), Expect = 8.9e-73
Identity = 155/223 (69.51%), Postives = 170/223 (76.23%), Query Frame = 0


Query: 36  KSSSHVPKFGNWDSDDVPYTICFENARELRAAGVTFDPNDPDTYPPAT--VVNQKPIPAD 95
           KSSSHVPKFGNWD+DDVPYTICFENA ELRAAGVTFDPNDPDTYPP      N +  P+D
Sbjct: 4   KSSSHVPKFGNWDTDDVPYTICFENAGELRAAGVTFDPNDPDTYPPEAFPAANHRSNPSD 63

Query: 96  NRRHHDGGDYHQR------RAMGNSGSEKLSSERSGSDYALLKEAKQSGRKKKNSIGAEG 155
            RRHH   D+H+R      R   +SGSEKLSSERSGSDY+LLKE    GR+KK + G +G
Sbjct: 64  RRRHH---DHHRRPREQPNRDRRSSGSEKLSSERSGSDYSLLKE--PGGRRKKINNGVDG 123

Query: 156 MSRFTPTTT-VGGKGNRNPRVRRNNEGEMIASVPKFGSWDVRDPKSGDGYTAIFNKVKIE 215
           +SRF PT    GG  N NPR RR NEGEM+ASVPKFGSWD RDPKSGDGYTAIFNKVK+E
Sbjct: 124 ISRFPPTAAGHGGNPNPNPRARR-NEGEMVASVPKFGSWDARDPKSGDGYTAIFNKVKME 183

Query: 216 KEIGGSNNPQAVPPLMNQTKQLPIAQTTTATNTHGSTSFASKV 250
           K+IGGSN+ QAVPPL NQTKQ PI Q       HGSTSF SKV
Sbjct: 184 KKIGGSNSSQAVPPLTNQTKQQPIPQI-----VHGSTSFVSKV 215

[Close]

BLAST of HG10021579 vs. ExPASy TrEMBL
Match: A0A6J1GSU2 (RPM1-interacting protein 4-like OS=Cucurbita moschata OX=3662 GN=LOC111457178 PE=4 SV=1)

HSP 1 Score: 241.1 bits (614), Expect = 5.1e-60
Identity = 145/228 (63.60%), Postives = 160/228 (70.18%), Query Frame = 0


Query: 32  MAGPKSSSHVPKFGNWDSDDVPYTICFENARELRAAGVTFDPNDPDTYPPATVVNQKPIP 91
           MAG KSS HVPKFGNWD+DDVPYTICFENARELRAAG+TFDPNDPDTYPP      KP+ 
Sbjct: 1   MAGAKSSFHVPKFGNWDTDDVPYTICFENARELRAAGITFDPNDPDTYPPEVF---KPVA 60

Query: 92  ADNRRHHDGGDYHQRR----------AMGNSGSEKLSSERSGSDYALLKEAKQSGRKKKN 151
                 HDGG+ HQRR          A+ NSGSEKLSSERSGSDYALLK++K++      
Sbjct: 61  ------HDGGE-HQRRPRQQPNRERGAIINSGSEKLSSERSGSDYALLKKSKEN------ 120

Query: 152 SIGAEGMSRFTPTTTVGGKGNRNPRVRRNNEGEMIASVPKFGSWDVRDPKSGDGYTAIFN 211
             G EG+SR  P   V G G  NP           ASVPKFGSWD RDPKSGDGYTAIFN
Sbjct: 121 --GVEGISRLAP--AVAGHGG-NP-----------ASVPKFGSWDARDPKSGDGYTAIFN 180

Query: 212 KVKIEKEIGGSNNPQAVPPLMNQTKQLPIAQTTTATNTHGSTSFASKV 250
           K+KIEK+I  S NPQ+VPPLMN+TKQ PIA T T   T G TSFASK+
Sbjct: 181 KMKIEKQIAAS-NPQSVPPLMNKTKQ-PIAHTNT---TSGFTSFASKI 191

[Close]

BLAST of HG10021579 vs. TAIR 10
Match: AT3G25070.1 (RPM1 interacting protein 4 )

HSP 1 Score: 86.7 bits (213), Expect = 3.1e-17
Identity = 64/193 (33.16%), Postives = 92/193 (47.67%), Query Frame = 0


Query: 39  SHVPKFGNWDSDD-VPYTICFENARELRAAG-VTFDPNDPD----------TYPPATVVN 98
           S+VPKFGNW++++ VPYT  F+ AR+ RA G    +PNDP+           +PP++   
Sbjct: 4   SNVPKFGNWEAEENVPYTAYFDKARKTRAPGSKIMNPNDPEYNSDSQSQAPPHPPSS--R 63

Query: 99  QKPIPAD----NRRHHDGGDYHQRRAMGNSGSEKLSSERSGSDYALLKEAKQSGRKK--- 158
            KP   D    +R H    +  + +  G++G    S+E +        +      K    
Sbjct: 64  TKPEQVDTVRRSREHMRSREESELKQFGDAGGS--SNEAANKRQGRASQNNSYDNKSPLH 123

Query: 159 KNSIGAEGMSRFTPTTTVGGKGNRNPRVRRNNEGEMIASVPKFGSWDVRDPKSGDGYTAI 213
           KNS    G SR  PT            +R +   E +  VPKFG WD  +P S DGYT I
Sbjct: 124 KNSYDGTGKSRPKPT-----------NLRADESPEKVTVVPKFGDWDENNPSSADGYTHI 181

[Close]

BLAST of HG10021579 vs. TAIR 10
Match: AT2G04410.1 (RPM1-interacting protein 4 (RIN4) family protein )

HSP 1 Score: 51.6 bits (122), Expect = 1.1e-06
Identity = 24/51 (47.06%), Postives = 34/51 (66.67%), Query Frame = 0


Query: 179 VPKFGSWDVRDPKSGDGYTAIFNKVKIEKEIGG-SNNPQAVPPLMNQTKQL 229
           +PKFG WDV DP S +G+T IFNK + EK+ GG S++P    P  N+  ++
Sbjct: 8   LPKFGEWDVNDPSSAEGFTVIFNKARNEKKGGGKSDSPGKDEPGYNKNGEV 58

[Close]

BLAST of HG10021579 vs. TAIR 10
Match: AT5G55850.1 (RPM1-interacting protein 4 (RIN4) family protein )

HSP 1 Score: 51.6 bits (122), Expect = 1.1e-06
Identity = 20/33 (60.61%), Postives = 25/33 (75.76%), Query Frame = 0


Query: 179 VPKFGSWDVRDPKSGDGYTAIFNKVKIEKEIGG 212
           +PKFG WDV DP S +G+T IFNK + EK+ GG
Sbjct: 8   LPKFGEWDVNDPASAEGFTVIFNKARDEKKTGG 40

[Close]

BLAST of HG10021579 vs. TAIR 10
Match: AT5G55850.2 (RPM1-interacting protein 4 (RIN4) family protein )

HSP 1 Score: 51.6 bits (122), Expect = 1.1e-06
Identity = 20/33 (60.61%), Postives = 25/33 (75.76%), Query Frame = 0


Query: 179 VPKFGSWDVRDPKSGDGYTAIFNKVKIEKEIGG 212
           +PKFG WDV DP S +G+T IFNK + EK+ GG
Sbjct: 24  LPKFGEWDVNDPASAEGFTVIFNKARDEKKTGG 56

[Close]

BLAST of HG10021579 vs. TAIR 10
Match: AT5G55850.3 (RPM1-interacting protein 4 (RIN4) family protein )

HSP 1 Score: 51.6 bits (122), Expect = 1.1e-06
Identity = 20/33 (60.61%), Postives = 25/33 (75.76%), Query Frame = 0


Query: 179 VPKFGSWDVRDPKSGDGYTAIFNKVKIEKEIGG 212
           +PKFG WDV DP S +G+T IFNK + EK+ GG
Sbjct: 24  LPKFGEWDVNDPASAEGFTVIFNKARDEKKTGG 56

The following BLAST results are available for this feature:

BLAST of HG10021579 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038895247.1	3.8e-102	84.91	RPM1-interacting protein 4-like isoform X1 [Benincasa hispida]	[more]
XP_038895249.1	5.0e-102	86.88	RPM1-interacting protein 4-like isoform X2 [Benincasa hispida]	[more]
KAA0054298.1	2.7e-95	82.82	RPM1-interacting protein 4-like [Cucumis melo var. makuwa] >TYK12335.1 RPM1-inte...	[more]
XP_008458983.1	7.7e-95	84.93	PREDICTED: RPM1-interacting protein 4-like [Cucumis melo]	[more]
XP_011660296.1	8.8e-91	80.82	RPM1-interacting protein 4 [Cucumis sativus] >KGN66824.1 hypothetical protein Cs...	[more]

BLAST of HG10021579 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8GYN5	4.3e-16	33.16	RPM1-interacting protein 4 OS=Arabidopsis thaliana OX=3702 GN=RIN4 PE=1 SV=1	[more]
O22633	1.6e-05	60.61	Protein NOI4 OS=Arabidopsis thaliana OX=3702 GN=NOI4 PE=1 SV=1	[more]
Q8S3M3	2.6e-05	38.36	NOI-like protein OS=Elaeis oleifera OX=80265 PE=2 SV=1	[more]

BLAST of HG10021579 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UH42	1.3e-95	82.82	RPM1-interacting protein 4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A1S3C9P5	3.7e-95	84.93	RPM1-interacting protein 4-like OS=Cucumis melo OX=3656 GN=LOC103498234 PE=4 SV=...	[more]
A0A0A0M0M0	4.3e-91	80.82	AvrRpt-cleavage domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G69...	[more]
A0A6J1CND0	8.9e-73	69.51	RPM1-interacting protein 4-like OS=Momordica charantia OX=3673 GN=LOC111012692 P...	[more]
A0A6J1GSU2	5.1e-60	63.60	RPM1-interacting protein 4-like OS=Cucurbita moschata OX=3662 GN=LOC111457178 PE...	[more]

BLAST of HG10021579 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G25070.1	3.1e-17	33.16	RPM1 interacting protein 4	[more]
AT2G04410.1	1.1e-06	47.06	RPM1-interacting protein 4 (RIN4) family protein	[more]
AT5G55850.1	1.1e-06	60.61	RPM1-interacting protein 4 (RIN4) family protein	[more]
AT5G55850.2	1.1e-06	60.61	RPM1-interacting protein 4 (RIN4) family protein	[more]
AT5G55850.3	1.1e-06	60.61	RPM1-interacting protein 4 (RIN4) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008700	RIN4, pathogenic type III effector avirulence factor Avr cleavage site	PFAM	PF05627	AvrRpt-cleavage	coord: 177..207 e-value: 2.5E-14 score: 52.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 72..168
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 91..105
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 147..161
None	No IPR available	PANTHER	PTHR33159:SF49	OS06G0636100 PROTEIN	coord: 37..229
IPR040387	RPM1-interacting protein 4/NOI4	PANTHER	PTHR33159	RPM1-INTERACTING PROTEIN 4 (RIN4) FAMILY PROTEIN	coord: 37..229

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10021579.1	HG10021579.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005886	plasma membrane