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HG10021564 (gene) Bottle gourd (Hangzhou Gourd) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCCAAAACCAGACCTCCCAAGAAAGACTTGGACTCTTACACCATCAGAGGCACCAACAAGGTCGTTAGAGGTAAACTCCTTCATTTACTTGTTTCATTTTACTTCCAAATGCTCTCTGTCTCTCGGTCTAGTACAATTCCTTCAATGCTGCTTTACGAGTCCTGATTTGACGGATTTTTCAGTTGGAGATTGTGTTCTGATGCGCCCATCGGAAACGAGTAAGCTACCGTATGTAGCGCGTGTTGAGAAGATCGAAGCTGATAACCGGAACAACATTAAAGTTCGAGTCAGGTGGTATTATCGACCAGAGGAGTCGATTGGGGGCCGGAGGCAGTTCCATGGAGCTAAGGAGCTCTTCTTGTCTGACCACTACGATGTCCAGAGTGCTCACACCATTGAAGGGAAGTGCATTGTTCATTCCTTTAAGAACTATACTAAGCTTGACAATGTTGGTGCTGAGGATTATTATTGTAGATTTGAGTACAAGGCTGCTACTGGAGCTTTCACGCCTGACCGAGTTGCTGTGTGAGTTTTCACTTTTTTTGTTGTCTAGTCTAATGTCTGATTCTGGTGCAAATTCCTTGAATGGGGGGTTTTTTTTTTTATATTTATTTATTTATTTTCCATTTCCTTGCAGCTATTGCAAATGTGAGATGCCTTATAACCCAGACGACCTCATGGTGCAGTGTGAGGGCTGCAAGGACTGGTAAATCTTCTTGTTAATTCTGGGAACTAATGTTTGCTTTTGTGTACTGAATCCCTGAATTCTCTGGTGTATTTGCACTTTCCAGAGTGAAGTGTTTACATAAGCAATTGAAGGGTCGAATTTGTTTGTAAAAGGAGTATGCAGGGGATGATGAATTGAGAGTGAATTTCGGATAAGTTTTAAGGTAGTGATTTAAAGTGGCACACTTTTTTTTAGAAGAACTTTTTGAAAGAAGCACTAATTAAGTGCTTCTCACTTTTAATTTTTAATTTTTTTTTAAAATTTTCTTTTTTGGTGTTTTTGGATCTTTCAGAATCACCTTTTGTCATGTGACCAAATATATGATTGAAAAGTACTTTTAATTAGTTAAATGTCAGCTTTCTGAAACTCACCTTAAGTTTTATGAATTAACAATTGAAGATTATTTAATCAAAGACAAAGTTCTAGATGCACTGAAATGGCTTTTGGCATTGATTGATGCACCATAGACATTATATTAGTCTGTACAAAGATCACCTTGATCGGTTAATTAGCCATTGTTGTACCATAGGTGAAGCTAATTGTTAACGTTTAAAGTGCAGTGTGATGTACAGTCTTTTTTGGATTGTAAATTCTATTATGTTGCTAGAAATGGAATATTCACGTTAACTCTATTCTATTAGTCTATTAGAACTCCATAACTTAGTTCTGATTGGAGTGGTTATATTATACCATTTTGGTTGATACTGGAACTATTTAGAGAGAGTCAAACTCAAGAGTCCAGTCAGTCTCAATAATTTATTGTTTTCTGAAAGCACAAAGTTCTCATGTTGCCTTTGGTCTTTAGGTATCATCCTGCTTGTGTAAGCATGACTATCGAGGAAGCAAAAATATTGGACCATTTTGTGTGTTCTGAATGTGCATCTGATACCGACATCAAGAAAAATGAGAATACATTTTCAGCGTCACCGGTGGCCGATGGCAAGGTTAGTAGCTGTTATCTGTTGCGTCCTACGTAGAATGGTAGTTGAATATCAATCATCTTTGTCACCGTATTAAGGTTTTCTATTCACGTCAGATGTCTTGATTTCTTTTTTGATGTATTTAAAGATTAACTCAGAAGCTCAAGTACAGACAAGAAGACAAATGAAATACACGCAATGTTTGGCATTAGTCAATGCTAAATGTCCAGACCATCAGTGTGGTCCCTTTCCAATCACTTCAGTCATTTTTTAATTAATTAACTTTAAATCCCGTGAGATTAGTCGAGGTGCGCGTAAGCTGGCCCCGGACACTCACAGATATAAAAAAAAAAAATTAACTTTGAAAGTTTTTCTTTTGATTCACGTGCTATTTGTTTTCCAAAAGCCAGTCCTATGTTTCTTAAACGTCGGCCATTGGGCTTCCTCTTTGCTGATGATCGATTTGAGATTATTGTCTACTTTCACATGTCTAATGAATAATCTAATCAGATGCTGTTGTTATGTGTTTGGTGAGTTTATCCTAAATGGTTTGTCGAATGTCTTCTAATAACTTTTACTTTTACCATAGGTTTTGTTTAAATTAGAATGCATTCATTGGAAATGATTATATACCAGAATATATGGTTTTGTTTTCTGCATACGCCAAATATTCCTCTTACCTCAAGAAAATTCTGACAGCTACATAAGGACATGTCTGCGTGTATGATGAAAAGAGTTGAGAGTTCTTTTGTCAGTTTGATTCATCAACGACCAAATTATTTTTTCATAATAATTATAAAAAAATCAGTTCCTTATTTTCAAATGTCATCTTTTTTAGGCTTGTACATGTCATATTGGTCAATTGTTTTGTTGTTTCTATATAGTTTTTCAACTTTCTTCATGTTGTTGCAAAAGACGCTATGATCCATCCAACTAAGGAGGACATCATTCGTTGGGAGGCAACCTTCCCGAAAGTTAAAGGTTCAAAATATTAA ATGGCCAAAACCAGACCTCCCAAGAAAGACTTGGACTCTTACACCATCAGAGGCACCAACAAGGTCGTTAGAGTTGGAGATTGTGTTCTGATGCGCCCATCGGAAACGAGTAAGCTACCGTATGTAGCGCGTGTTGAGAAGATCGAAGCTGATAACCGGAACAACATTAAAGTTCGAGTCAGGTGGTATTATCGACCAGAGGAGTCGATTGGGGGCCGGAGGCAGTTCCATGGAGCTAAGGAGCTCTTCTTGTCTGACCACTACGATGTCCAGAGTGCTCACACCATTGAAGGGAAGTGCATTGTTCATTCCTTTAAGAACTATACTAAGCTTGACAATGTTGGTGCTGAGGATTATTATTGTAGATTTGAGTACAAGGCTGCTACTGGAGCTTTCACGCCTGACCGAGTTGCTGTCTATTGCAAATGTGAGATGCCTTATAACCCAGACGACCTCATGGTGCAGTGTGAGGGCTGCAAGGACTGGTATCATCCTGCTTGTGTAAGCATGACTATCGAGGAAGCAAAAATATTGGACCATTTTGTGTGTTCTGAATGTGCATCTGATACCGACATCAAGAAAAATGAGAATACATTTTCAGCGTCACCGGTGGCCGATGGCAAGTTTTTCAACTTTCTTCATGTTGTTGCAAAAGACGCTATGATCCATCCAACTAAGGAGGACATCATTCGTTGGGAGGCAACCTTCCCGAAAGTTAAAGGTTCAAAATATTAA ATGGCCAAAACCAGACCTCCCAAGAAAGACTTGGACTCTTACACCATCAGAGGCACCAACAAGGTCGTTAGAGTTGGAGATTGTGTTCTGATGCGCCCATCGGAAACGAGTAAGCTACCGTATGTAGCGCGTGTTGAGAAGATCGAAGCTGATAACCGGAACAACATTAAAGTTCGAGTCAGGTGGTATTATCGACCAGAGGAGTCGATTGGGGGCCGGAGGCAGTTCCATGGAGCTAAGGAGCTCTTCTTGTCTGACCACTACGATGTCCAGAGTGCTCACACCATTGAAGGGAAGTGCATTGTTCATTCCTTTAAGAACTATACTAAGCTTGACAATGTTGGTGCTGAGGATTATTATTGTAGATTTGAGTACAAGGCTGCTACTGGAGCTTTCACGCCTGACCGAGTTGCTGTCTATTGCAAATGTGAGATGCCTTATAACCCAGACGACCTCATGGTGCAGTGTGAGGGCTGCAAGGACTGGTATCATCCTGCTTGTGTAAGCATGACTATCGAGGAAGCAAAAATATTGGACCATTTTGTGTGTTCTGAATGTGCATCTGATACCGACATCAAGAAAAATGAGAATACATTTTCAGCGTCACCGGTGGCCGATGGCAAGTTTTTCAACTTTCTTCATGTTGTTGCAAAAGACGCTATGATCCATCCAACTAAGGAGGACATCATTCGTTGGGAGGCAACCTTCCCGAAAGTTAAAGGTTCAAAATATTAA MAKTRPPKKDLDSYTIRGTNKVVRVGDCVLMRPSETSKLPYVARVEKIEADNRNNIKVRVRWYYRPEESIGGRRQFHGAKELFLSDHYDVQSAHTIEGKCIVHSFKNYTKLDNVGAEDYYCRFEYKAATGAFTPDRVAVYCKCEMPYNPDDLMVQCEGCKDWYHPACVSMTIEEAKILDHFVCSECASDTDIKKNENTFSASPVADGKFFNFLHVVAKDAMIHPTKEDIIRWEATFPKVKGSKY Homology
BLAST of HG10021564 vs. NCBI nr
Match: XP_038895416.1 (chromatin remodeling protein EBS-like isoform X1 [Benincasa hispida]) HSP 1 Score: 434.9 bits (1117), Expect = 4.7e-118 Identity = 205/211 (97.16%), Postives = 206/211 (97.63%), Query Frame = 0
BLAST of HG10021564 vs. NCBI nr
Match: XP_038895417.1 (chromatin remodeling protein EBS-like isoform X2 [Benincasa hispida]) HSP 1 Score: 433.7 bits (1114), Expect = 1.0e-117 Identity = 204/208 (98.08%), Postives = 205/208 (98.56%), Query Frame = 0
BLAST of HG10021564 vs. NCBI nr
Match: XP_022994894.1 (chromatin remodeling protein EBS-like isoform X3 [Cucurbita maxima]) HSP 1 Score: 428.3 bits (1100), Expect = 4.4e-116 Identity = 199/208 (95.67%), Postives = 203/208 (97.60%), Query Frame = 0
BLAST of HG10021564 vs. NCBI nr
Match: XP_022994891.1 (chromatin remodeling protein EBS-like isoform X2 [Cucurbita maxima] >XP_022994893.1 chromatin remodeling protein EBS-like isoform X2 [Cucurbita maxima]) HSP 1 Score: 428.3 bits (1100), Expect = 4.4e-116 Identity = 199/208 (95.67%), Postives = 203/208 (97.60%), Query Frame = 0
BLAST of HG10021564 vs. NCBI nr
Match: XP_022994890.1 (chromatin remodeling protein EBS-like isoform X1 [Cucurbita maxima]) HSP 1 Score: 428.3 bits (1100), Expect = 4.4e-116 Identity = 199/208 (95.67%), Postives = 203/208 (97.60%), Query Frame = 0
BLAST of HG10021564 vs. ExPASy Swiss-Prot
Match: F4JL28 (Chromatin remodeling protein EBS OS=Arabidopsis thaliana OX=3702 GN=EBS PE=1 SV=1) HSP 1 Score: 381.3 bits (978), Expect = 8.0e-105 Identity = 176/216 (81.48%), Postives = 193/216 (89.35%), Query Frame = 0
BLAST of HG10021564 vs. ExPASy Swiss-Prot
Match: Q9FEN9 (Chromatin remodeling protein SHL OS=Arabidopsis thaliana OX=3702 GN=SHL PE=1 SV=1) HSP 1 Score: 280.4 bits (716), Expect = 1.9e-74 Identity = 130/201 (64.68%), Postives = 154/201 (76.62%), Query Frame = 0
BLAST of HG10021564 vs. ExPASy Swiss-Prot
Match: F4JGB7 (Chromatin remodeling protein At4g04260 OS=Arabidopsis thaliana OX=3702 GN=At4g04260 PE=3 SV=2) HSP 1 Score: 276.9 bits (707), Expect = 2.1e-73 Identity = 135/185 (72.97%), Postives = 152/185 (82.16%), Query Frame = 0
BLAST of HG10021564 vs. ExPASy Swiss-Prot
Match: Q9P281 (BAH and coiled-coil domain-containing protein 1 OS=Homo sapiens OX=9606 GN=BAHCC1 PE=1 SV=4) HSP 1 Score: 72.4 bits (176), Expect = 8.0e-12 Identity = 43/132 (32.58%), Postives = 65/132 (49.24%), Query Frame = 0
BLAST of HG10021564 vs. ExPASy Swiss-Prot
Match: Q3UHR0 (BAH and coiled-coil domain-containing protein 1 OS=Mus musculus OX=10090 GN=Bahcc1 PE=1 SV=2) HSP 1 Score: 72.0 bits (175), Expect = 1.0e-11 Identity = 44/132 (33.33%), Postives = 65/132 (49.24%), Query Frame = 0
BLAST of HG10021564 vs. ExPASy TrEMBL
Match: A0A6J1K0J4 (chromatin remodeling protein EBS-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111490482 PE=4 SV=1) HSP 1 Score: 428.3 bits (1100), Expect = 2.1e-116 Identity = 199/208 (95.67%), Postives = 203/208 (97.60%), Query Frame = 0
BLAST of HG10021564 vs. ExPASy TrEMBL
Match: A0A6J1K452 (chromatin remodeling protein EBS-like isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111490482 PE=4 SV=1) HSP 1 Score: 428.3 bits (1100), Expect = 2.1e-116 Identity = 199/208 (95.67%), Postives = 203/208 (97.60%), Query Frame = 0
BLAST of HG10021564 vs. ExPASy TrEMBL
Match: A0A6J1K2K9 (chromatin remodeling protein EBS-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111490482 PE=4 SV=1) HSP 1 Score: 428.3 bits (1100), Expect = 2.1e-116 Identity = 199/208 (95.67%), Postives = 203/208 (97.60%), Query Frame = 0
BLAST of HG10021564 vs. ExPASy TrEMBL
Match: A0A1S3C959 (chromatin remodeling protein EBS OS=Cucumis melo OX=3656 GN=LOC103498243 PE=4 SV=1) HSP 1 Score: 426.8 bits (1096), Expect = 6.1e-116 Identity = 200/208 (96.15%), Postives = 202/208 (97.12%), Query Frame = 0
BLAST of HG10021564 vs. ExPASy TrEMBL
Match: A0A6J1GU99 (chromatin remodeling protein EBS-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111456995 PE=4 SV=1) HSP 1 Score: 426.4 bits (1095), Expect = 8.0e-116 Identity = 197/208 (94.71%), Postives = 203/208 (97.60%), Query Frame = 0
BLAST of HG10021564 vs. TAIR 10
Match: AT4G22140.1 (PHD finger family protein / bromo-adjacent homology (BAH) domain-containing protein ) HSP 1 Score: 381.3 bits (978), Expect = 5.7e-106 Identity = 176/216 (81.48%), Postives = 193/216 (89.35%), Query Frame = 0
BLAST of HG10021564 vs. TAIR 10
Match: AT4G22140.2 (PHD finger family protein / bromo-adjacent homology (BAH) domain-containing protein ) HSP 1 Score: 381.3 bits (978), Expect = 5.7e-106 Identity = 176/216 (81.48%), Postives = 193/216 (89.35%), Query Frame = 0
BLAST of HG10021564 vs. TAIR 10
Match: AT4G39100.1 (PHD finger family protein / bromo-adjacent homology (BAH) domain-containing protein ) HSP 1 Score: 280.4 bits (716), Expect = 1.4e-75 Identity = 130/201 (64.68%), Postives = 154/201 (76.62%), Query Frame = 0
BLAST of HG10021564 vs. TAIR 10
Match: AT4G04260.1 (Bromo-adjacent homology (BAH) domain-containing protein ) HSP 1 Score: 264.2 bits (674), Expect = 1.0e-70 Identity = 129/179 (72.07%), Postives = 146/179 (81.56%), Query Frame = 0
BLAST of HG10021564 vs. TAIR 10
Match: AT4G39100.2 (PHD finger family protein / bromo-adjacent homology (BAH) domain-containing protein ) HSP 1 Score: 244.2 bits (622), Expect = 1.1e-64 Identity = 113/163 (69.33%), Postives = 131/163 (80.37%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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