![](http://cucurbitgenomics.org/sites/default/files/styles/slideshow/public/carousel/101322_web.jpg?itok=EG-G51x6)
HG10021560 (gene) Bottle gourd (Hangzhou Gourd) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGGTATGTTTCTAATCTCTACCTAGAATAATTTTCAAAATCAATAAATTTAGACCGTATGTACAACAGGGCACAAAGGATACAATGGTTGGGGGAGTAGGTGTCAAATGTGGAAGTCCAAAAAGTAACCAAAAAAGAGATCGAGAGACCTCTACAATAGATGTGAATGTTATAACGAAAAAAACAAGAACACAGACCAAGGTAATATCGATCTATTATAATAGTCTATATTAACAATATGAGTTCATACTAAGATTGATTAAATGTGCAGAATGTGAGAAAGATAGTAAACAAAAAAAGGAAGGATATAAAGGACGCACAAGAAGAAGAGGAGCAAGACGAACAAGAAGAGACTAGGGTATGACATGTTCATTTTATCAAACTATTTTGAAATTATAGTGTATTTGTTATACTAACAGGATCGTATGATCTATCAAATACTCAACAGGAAGAACACGACAGTAATGAGGGTGAAGAGGATGAATCAAAACTTGAAGAGAATTTTGAAAACATGTTTGAGGAAACAAAAGATAATGAAGAAGCCAACTCAGAAAGTCATGGAGACACAATAGAGACAAAAAAAGAATCTTCAAGCAAAGGGTCGAACAAAAAGAAACAGAAGGAGAAAGGAAAAAAAGTAATTATCCATTGTTTGAAACACTAATGTACAATACCAAATTAATTATTGTAATTGACAAATTATAACTACAAAGTAGCAAGGATAAAGCAAAGGGCAAACAATCCACAAGGGAGAAAGGTATCACACCATTACGAGATGACAAAAAGGAGGTATGTTCACTAAAATACTCTATATTCATCCTTACTATCTGACTTTATAGATACATTACTTATAGATTAATATACATATATTAGGATGAGTTGTATCTAATGAGTGCTGAAAGGAAAAATGAACCACTGAAAATAAACTTGCAAACAAAGTGTACAGTAATTGAAAAGCTGAAGGAAAATTTAGATGAAGAATTGCAAGAGAAGTTTAGAAATACAATATTTGGACATTTCCTTGATTTTTCAATTACAAATCAATCATCACAACTTTTGTTACATTTAATCCAAAGAATGTGTAAACCTAAGTCTTCCAGTCAGTTGAATTTCTTGATAGGCAATCGGGTATTAAAGTTTGGTTTAAGGGAATTTGCTTTGATAGTTGGTTTAAATTGTGGCGAACTACCGATAATTGATCAAAGTATGATAAAAGGTGGGGGAAATATAAAGAAAATGTACTTTGATAATCGAAAGTATGTGACAAGGATGTTCCTTAACATAATCTTCAATAATAGCAAAGCCGACTCTGACAGTGACAGAATAAAAATGGCTAAATTGTATTTTCTAGAGAGTTTTCTTATCCCAAAACAAGAGACTCTGAATTTGGAATTGGAGCATATACTAATGGTAGATGATGATGAGTTGTTTGACAACTATCCATGGGGAAGGGTTGCTTTTGATCTCCTAGTTAAATTCATGAATAGAGTAGTAAGCAGCAAAGGCCAAACGGAAATAGAGGGTTTATATTCCCAATATTGGCATGGGCATATGAAGTAA ATGAGACCGTATGTACAACAGGGCACAAAGGATACAATGGTTGGGGGAGTAGGTGTCAAATGTGGAAGTCCAAAAAGTAACCAAAAAAGAGATCGAGAGACCTCTACAATAGATGTGAATGTTATAACGAAAAAAACAAGAACACAGACCAAGAATGTGAGAAAGATAGTAAACAAAAAAAGGAAGGATATAAAGGACGCACAAGAAGAAGAGGAGCAAGACGAACAAGAAGAGACTAGGGAAGAACACGACAGTAATGAGGGTGAAGAGGATGAATCAAAACTTGAAGAGAATTTTGAAAACATGTTTGAGGAAACAAAAGATAATGAAGAAGCCAACTCAGAAAGTCATGGAGACACAATAGAGACAAAAAAAGAATCTTCAAGCAAAGGGTCGAACAAAAAGAAACAGAAGGAGAAAGGAAAAAAAGATGAGTTGTATCTAATGAGTGCTGAAAGGAAAAATGAACCACTGAAAATAAACTTGCAAACAAAGTGTACAGTAATTGAAAAGCTGAAGGAAAATTTAGATGAAGAATTGCAAGAGAAGTTTAGAAATACAATATTTGGACATTTCCTTGATTTTTCAATTACAAATCAATCATCACAACTTTTGTTACATTTAATCCAAAGAATGTGTAAACCTAAGTCTTCCAGTCAGTTGAATTTCTTGATAGGCAATCGGGTATTAAAGTTTGGTTTAAGGGAATTTGCTTTGATAGTTGGTTTAAATTGTGGCGAACTACCGATAATTGATCAAAGTATGATAAAAGGTGGGGGAAATATAAAGAAAATGTACTTTGATAATCGAAAGTATGTGACAAGGATGTTCCTTAACATAATCTTCAATAATAGCAAAGCCGACTCTGACAGTGACAGAATAAAAATGGCTAAATTGTATTTTCTAGAGAGTTTTCTTATCCCAAAACAAGAGACTCTGAATTTGGAATTGGAGCATATACTAATGGTAGATGATGATGAGTTGTTTGACAACTATCCATGGGGAAGGGTTGCTTTTGATCTCCTAGTTAAATTCATGAATAGAGTAGTAAGCAGCAAAGGCCAAACGGAAATAGAGGGTTTATATTCCCAATATTGGCATGGGCATATGAAGTAA ATGAGACCGTATGTACAACAGGGCACAAAGGATACAATGGTTGGGGGAGTAGGTGTCAAATGTGGAAGTCCAAAAAGTAACCAAAAAAGAGATCGAGAGACCTCTACAATAGATGTGAATGTTATAACGAAAAAAACAAGAACACAGACCAAGAATGTGAGAAAGATAGTAAACAAAAAAAGGAAGGATATAAAGGACGCACAAGAAGAAGAGGAGCAAGACGAACAAGAAGAGACTAGGGAAGAACACGACAGTAATGAGGGTGAAGAGGATGAATCAAAACTTGAAGAGAATTTTGAAAACATGTTTGAGGAAACAAAAGATAATGAAGAAGCCAACTCAGAAAGTCATGGAGACACAATAGAGACAAAAAAAGAATCTTCAAGCAAAGGGTCGAACAAAAAGAAACAGAAGGAGAAAGGAAAAAAAGATGAGTTGTATCTAATGAGTGCTGAAAGGAAAAATGAACCACTGAAAATAAACTTGCAAACAAAGTGTACAGTAATTGAAAAGCTGAAGGAAAATTTAGATGAAGAATTGCAAGAGAAGTTTAGAAATACAATATTTGGACATTTCCTTGATTTTTCAATTACAAATCAATCATCACAACTTTTGTTACATTTAATCCAAAGAATGTGTAAACCTAAGTCTTCCAGTCAGTTGAATTTCTTGATAGGCAATCGGGTATTAAAGTTTGGTTTAAGGGAATTTGCTTTGATAGTTGGTTTAAATTGTGGCGAACTACCGATAATTGATCAAAGTATGATAAAAGGTGGGGGAAATATAAAGAAAATGTACTTTGATAATCGAAAGTATGTGACAAGGATGTTCCTTAACATAATCTTCAATAATAGCAAAGCCGACTCTGACAGTGACAGAATAAAAATGGCTAAATTGTATTTTCTAGAGAGTTTTCTTATCCCAAAACAAGAGACTCTGAATTTGGAATTGGAGCATATACTAATGGTAGATGATGATGAGTTGTTTGACAACTATCCATGGGGAAGGGTTGCTTTTGATCTCCTAGTTAAATTCATGAATAGAGTAGTAAGCAGCAAAGGCCAAACGGAAATAGAGGGTTTATATTCCCAATATTGGCATGGGCATATGAAGTAA MRPYVQQGTKDTMVGGVGVKCGSPKSNQKRDRETSTIDVNVITKKTRTQTKNVRKIVNKKRKDIKDAQEEEEQDEQEETREEHDSNEGEEDESKLEENFENMFEETKDNEEANSESHGDTIETKKESSSKGSNKKKQKEKGKKDELYLMSAERKNEPLKINLQTKCTVIEKLKENLDEELQEKFRNTIFGHFLDFSITNQSSQLLLHLIQRMCKPKSSSQLNFLIGNRVLKFGLREFALIVGLNCGELPIIDQSMIKGGGNIKKMYFDNRKYVTRMFLNIIFNNSKADSDSDRIKMAKLYFLESFLIPKQETLNLELEHILMVDDDELFDNYPWGRVAFDLLVKFMNRVVSSKGQTEIEGLYSQYWHGHMK Homology
BLAST of HG10021560 vs. NCBI nr
Match: KAA0047596.1 (protein Ycf2-like [Cucumis melo var. makuwa]) HSP 1 Score: 288.9 bits (738), Expect = 6.3e-74 Identity = 178/357 (49.86%), Postives = 238/357 (66.67%), Query Frame = 0
BLAST of HG10021560 vs. NCBI nr
Match: TYK09852.1 (protein Ycf2-like [Cucumis melo var. makuwa]) HSP 1 Score: 217.2 bits (552), Expect = 2.3e-52 Identity = 104/147 (70.75%), Postives = 122/147 (82.99%), Query Frame = 0
BLAST of HG10021560 vs. NCBI nr
Match: KAA0061272.1 (uncharacterized protein E6C27_scaffold455G001150 [Cucumis melo var. makuwa]) HSP 1 Score: 216.1 bits (549), Expect = 5.2e-52 Identity = 103/145 (71.03%), Postives = 121/145 (83.45%), Query Frame = 0
BLAST of HG10021560 vs. NCBI nr
Match: TYK23840.1 (protein Ycf2-like [Cucumis melo var. makuwa]) HSP 1 Score: 215.7 bits (548), Expect = 6.8e-52 Identity = 103/147 (70.07%), Postives = 122/147 (82.99%), Query Frame = 0
BLAST of HG10021560 vs. NCBI nr
Match: KAA0051382.1 (protein Ycf2-like [Cucumis melo var. makuwa]) HSP 1 Score: 215.7 bits (548), Expect = 6.8e-52 Identity = 103/147 (70.07%), Postives = 122/147 (82.99%), Query Frame = 0
BLAST of HG10021560 vs. ExPASy TrEMBL
Match: A0A5A7U047 (Protein Ycf2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold115G00640 PE=4 SV=1) HSP 1 Score: 288.9 bits (738), Expect = 3.0e-74 Identity = 178/357 (49.86%), Postives = 238/357 (66.67%), Query Frame = 0
BLAST of HG10021560 vs. ExPASy TrEMBL
Match: A0A5D3CEX9 (Protein Ycf2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold39G00200 PE=4 SV=1) HSP 1 Score: 217.2 bits (552), Expect = 1.1e-52 Identity = 104/147 (70.75%), Postives = 122/147 (82.99%), Query Frame = 0
BLAST of HG10021560 vs. ExPASy TrEMBL
Match: A0A5A7UZD6 (DUF1985 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold455G001150 PE=4 SV=1) HSP 1 Score: 216.1 bits (549), Expect = 2.5e-52 Identity = 103/145 (71.03%), Postives = 121/145 (83.45%), Query Frame = 0
BLAST of HG10021560 vs. ExPASy TrEMBL
Match: A0A5A7U6E1 (Protein Ycf2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold55G001210 PE=4 SV=1) HSP 1 Score: 215.7 bits (548), Expect = 3.3e-52 Identity = 103/147 (70.07%), Postives = 122/147 (82.99%), Query Frame = 0
BLAST of HG10021560 vs. ExPASy TrEMBL
Match: A0A5D3DKA6 (Protein Ycf2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold419G00030 PE=4 SV=1) HSP 1 Score: 215.7 bits (548), Expect = 3.3e-52 Identity = 103/147 (70.07%), Postives = 122/147 (82.99%), Query Frame = 0
BLAST of HG10021560 vs. TAIR 10
Match: AT1G31150.1 (Domain of unknown function (DUF1985) ) HSP 1 Score: 66.2 bits (160), Expect = 6.2e-11 Identity = 42/164 (25.61%), Postives = 83/164 (50.61%), Query Frame = 0
BLAST of HG10021560 vs. TAIR 10
Match: AT5G45570.1 (Ulp1 protease family protein ) HSP 1 Score: 53.5 bits (127), Expect = 4.1e-07 Identity = 56/217 (25.81%), Postives = 95/217 (43.78%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|