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HG10021553 (gene) Bottle gourd (Hangzhou Gourd) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCAGCCTTTGGTTCAGGATATTATGATTTAGAGGCTGGTCCATTGTCTTCATACATGCATAGACATGGGCATGACCGTGGAGAGTATAATGAATATTTACACTATGAAGCGTTTGCAAATGTACTAGAGCCACCTAGGGATGTCCACTTTCTCCACGAGGACCCCGCCCCAAACGGGGTGGAGATTCCCCGTTTAGACAGGGAGTGA ATGTCAGCCTTTGGTTCAGGATATTATGATTTAGAGGCTGGTCCATTGTCTTCATACATGCATAGACATGGGCATGACCGTGGAGAGTATAATGAATATTTACACTATGAAGCGTTTGCAAATGTACTAGAGCCACCTAGGGATGTCCACTTTCTCCACGAGGACCCCGCCCCAAACGGGGTGGAGATTCCCCGTTTAGACAGGGAGTGA ATGTCAGCCTTTGGTTCAGGATATTATGATTTAGAGGCTGGTCCATTGTCTTCATACATGCATAGACATGGGCATGACCGTGGAGAGTATAATGAATATTTACACTATGAAGCGTTTGCAAATGTACTAGAGCCACCTAGGGATGTCCACTTTCTCCACGAGGACCCCGCCCCAAACGGGGTGGAGATTCCCCGTTTAGACAGGGAGTGA MSAFGSGYYDLEAGPLSSYMHRHGHDRGEYNEYLHYEAFANVLEPPRDVHFLHEDPAPNGVEIPRLDRE Homology
BLAST of HG10021553 vs. NCBI nr
Match: KAA0047564.1 (GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var. makuwa] >TYK14961.1 GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var. makuwa]) HSP 1 Score: 61.6 bits (148), Expect = 3.0e-06 Identity = 30/45 (66.67%), Postives = 32/45 (71.11%), Query Frame = 0
BLAST of HG10021553 vs. NCBI nr
Match: KAA0025800.1 (GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var. makuwa]) HSP 1 Score: 58.9 bits (141), Expect = 2.0e-05 Identity = 30/50 (60.00%), Postives = 33/50 (66.00%), Query Frame = 0
BLAST of HG10021553 vs. NCBI nr
Match: KAA0051098.1 (serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa] >TYK02687.1 serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa]) HSP 1 Score: 57.0 bits (136), Expect = 7.5e-05 Identity = 28/47 (59.57%), Postives = 31/47 (65.96%), Query Frame = 0
BLAST of HG10021553 vs. NCBI nr
Match: KAA0047926.1 (mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]) HSP 1 Score: 57.0 bits (136), Expect = 7.5e-05 Identity = 27/41 (65.85%), Postives = 30/41 (73.17%), Query Frame = 0
BLAST of HG10021553 vs. NCBI nr
Match: TYK02811.1 (GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var. makuwa]) HSP 1 Score: 54.7 bits (130), Expect = 3.7e-04 Identity = 26/46 (56.52%), Postives = 31/46 (67.39%), Query Frame = 0
BLAST of HG10021553 vs. ExPASy TrEMBL
Match: A0A5A7TX85 (GATA zinc finger domain-containing protein 10-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2754G00110 PE=4 SV=1) HSP 1 Score: 61.6 bits (148), Expect = 1.5e-06 Identity = 30/45 (66.67%), Postives = 32/45 (71.11%), Query Frame = 0
BLAST of HG10021553 vs. ExPASy TrEMBL
Match: A0A5A7SI16 (GATA zinc finger domain-containing protein 10-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold34G00500 PE=4 SV=1) HSP 1 Score: 58.9 bits (141), Expect = 9.5e-06 Identity = 30/50 (60.00%), Postives = 33/50 (66.00%), Query Frame = 0
BLAST of HG10021553 vs. ExPASy TrEMBL
Match: A0A5A7U731 (Serine/threonine-protein phosphatase 7 long form-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1161G00130 PE=4 SV=1) HSP 1 Score: 57.0 bits (136), Expect = 3.6e-05 Identity = 28/47 (59.57%), Postives = 31/47 (65.96%), Query Frame = 0
BLAST of HG10021553 vs. ExPASy TrEMBL
Match: A0A5A7U115 (Mediator of RNA polymerase II transcription subunit 12-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold199G00010 PE=4 SV=1) HSP 1 Score: 57.0 bits (136), Expect = 3.6e-05 Identity = 27/41 (65.85%), Postives = 30/41 (73.17%), Query Frame = 0
BLAST of HG10021553 vs. ExPASy TrEMBL
Match: A0A5D3BSU2 (GATA zinc finger domain-containing protein 10-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1418G00180 PE=4 SV=1) HSP 1 Score: 54.7 bits (130), Expect = 1.8e-04 Identity = 26/46 (56.52%), Postives = 31/46 (67.39%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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