![](http://cucurbitgenomics.org/sites/default/files/styles/slideshow/public/carousel/101322_web.jpg?itok=EG-G51x6)
HG10021533 (gene) Bottle gourd (Hangzhou Gourd) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGCTTATAAATGGTAGTTTTTTGGATGTTCGTGGATCAGCGAGGACATCTTTGCTCTCACCAAATGTATTATATTTAGTAGCATTTGTGGTAATGCTCATTGGGAATTCTTCCGGATGGAATGTTCCTGTAAACCTAATACTGAAGAAGCCCGATGGGAGCGTAATAGAGAGCAAACTAATCCTAGAGGGGAAGCCAATAGGAGAATATTTCGAGGTAGATGCGGGGGAACTCACACTCGATAACCACGGATGTCGCGATAACGGCGTGATCGAGTTTGGCATGTTTGAACACAACACTCAAGGGAAAAGCGGGTTGATCTTGAAAGGTGTTGTGGTTCGATCAAAGGCCTCAGAAGGATGCCCCCATGGTGATGCCTAG ATGCTTATAAATGGTAGTTTTTTGGATGTTCGTGGATCAGCGAGGACATCTTTGCTCTCACCAAATGTATTATATTTAGTAGCATTTGTGGTAATGCTCATTGGGAATTCTTCCGGATGGAATGTTCCTGTAAACCTAATACTGAAGAAGCCCGATGGGAGCGTAATAGAGAGCAAACTAATCCTAGAGGGGAAGCCAATAGGAGAATATTTCGAGGTAGATGCGGGGGAACTCACACTCGATAACCACGGATGTCGCGATAACGGCGTGATCGAGTTTGGCATGTTTGAACACAACACTCAAGGGAAAAGCGGGTTGATCTTGAAAGGTGTTGTGGTTCGATCAAAGGCCTCAGAAGGATGCCCCCATGGTGATGCCTAG ATGCTTATAAATGGTAGTTTTTTGGATGTTCGTGGATCAGCGAGGACATCTTTGCTCTCACCAAATGTATTATATTTAGTAGCATTTGTGGTAATGCTCATTGGGAATTCTTCCGGATGGAATGTTCCTGTAAACCTAATACTGAAGAAGCCCGATGGGAGCGTAATAGAGAGCAAACTAATCCTAGAGGGGAAGCCAATAGGAGAATATTTCGAGGTAGATGCGGGGGAACTCACACTCGATAACCACGGATGTCGCGATAACGGCGTGATCGAGTTTGGCATGTTTGAACACAACACTCAAGGGAAAAGCGGGTTGATCTTGAAAGGTGTTGTGGTTCGATCAAAGGCCTCAGAAGGATGCCCCCATGGTGATGCCTAG MLINGSFLDVRGSARTSLLSPNVLYLVAFVVMLIGNSSGWNVPVNLILKKPDGSVIESKLILEGKPIGEYFEVDAGELTLDNHGCRDNGVIEFGMFEHNTQGKSGLILKGVVVRSKASEGCPHGDA Homology
BLAST of HG10021533 vs. NCBI nr
Match: WP_219729244.1 (PP2 domain-containing protein, partial [Pectobacterium odoriferum] >POE05059.1 hypothetical protein BV921_23310, partial [Pectobacterium odoriferum]) HSP 1 Score: 168.7 bits (426), Expect = 3.2e-38 Identity = 78/125 (62.40%), Postives = 100/125 (80.00%), Query Frame = 0
BLAST of HG10021533 vs. NCBI nr
Match: WP_181002512.1 (PP2 domain-containing protein, partial [Pectobacterium odoriferum] >POE16080.1 hypothetical protein BV923_23560, partial [Pectobacterium odoriferum]) HSP 1 Score: 168.7 bits (426), Expect = 3.2e-38 Identity = 78/125 (62.40%), Postives = 100/125 (80.00%), Query Frame = 0
BLAST of HG10021533 vs. NCBI nr
Match: XP_038893562.1 (lectin-like [Benincasa hispida]) HSP 1 Score: 156.0 bits (393), Expect = 2.2e-34 Identity = 74/122 (60.66%), Postives = 93/122 (76.23%), Query Frame = 0
BLAST of HG10021533 vs. NCBI nr
Match: AAA92465.1 (phloem protein 2 [Cucurbita argyrosperma]) HSP 1 Score: 117.9 bits (294), Expect = 6.5e-23 Identity = 60/120 (50.00%), Postives = 81/120 (67.50%), Query Frame = 0
BLAST of HG10021533 vs. NCBI nr
Match: KAG6583766.1 (hypothetical protein SDJN03_19698, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 117.1 bits (292), Expect = 1.1e-22 Identity = 60/120 (50.00%), Postives = 80/120 (66.67%), Query Frame = 0
BLAST of HG10021533 vs. ExPASy Swiss-Prot
Match: C0HJV2 (Lectin OS=Luffa acutangula OX=56866 PE=1 SV=1) HSP 1 Score: 85.9 bits (211), Expect = 3.6e-16 Identity = 46/115 (40.00%), Postives = 72/115 (62.61%), Query Frame = 0
BLAST of HG10021533 vs. ExPASy Swiss-Prot
Match: O81866 (Protein PHLOEM PROTEIN 2-LIKE A2 OS=Arabidopsis thaliana OX=3702 GN=PP2A2 PE=2 SV=1) HSP 1 Score: 70.5 bits (171), Expect = 1.6e-11 Identity = 44/112 (39.29%), Postives = 61/112 (54.46%), Query Frame = 0
BLAST of HG10021533 vs. ExPASy Swiss-Prot
Match: P0DSP5 (Lectin OS=Coccinia grandis OX=387127 PE=1 SV=1) HSP 1 Score: 63.9 bits (154), Expect = 1.5e-09 Identity = 35/104 (33.65%), Postives = 55/104 (52.88%), Query Frame = 0
BLAST of HG10021533 vs. ExPASy Swiss-Prot
Match: Q9FHE5 (Uncharacterized protein PHLOEM PROTEIN 2-LIKE A7 OS=Arabidopsis thaliana OX=3702 GN=PP2A7 PE=4 SV=1) HSP 1 Score: 57.4 bits (137), Expect = 1.4e-07 Identity = 43/119 (36.13%), Postives = 60/119 (50.42%), Query Frame = 0
BLAST of HG10021533 vs. ExPASy Swiss-Prot
Match: Q9C8U9 (Uncharacterized protein PHLOEM PROTEIN 2-LIKE A4 OS=Arabidopsis thaliana OX=3702 GN=PP2A4 PE=4 SV=1) HSP 1 Score: 56.6 bits (135), Expect = 2.3e-07 Identity = 42/114 (36.84%), Postives = 56/114 (49.12%), Query Frame = 0
BLAST of HG10021533 vs. ExPASy TrEMBL
Match: Q39461 (Phloem protein 2 OS=Cucurbita argyrosperma OX=34294 GN=PP2 PE=2 SV=1) HSP 1 Score: 117.9 bits (294), Expect = 3.2e-23 Identity = 60/120 (50.00%), Postives = 81/120 (67.50%), Query Frame = 0
BLAST of HG10021533 vs. ExPASy TrEMBL
Match: A0A6J1EHQ4 (lectin-like OS=Cucurbita moschata OX=3662 GN=LOC111434188 PE=4 SV=1) HSP 1 Score: 116.7 bits (291), Expect = 7.0e-23 Identity = 59/120 (49.17%), Postives = 81/120 (67.50%), Query Frame = 0
BLAST of HG10021533 vs. ExPASy TrEMBL
Match: A0A5D3CK31 (Dimeric phloem specific lectin PP2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold302G00020 PE=4 SV=1) HSP 1 Score: 115.5 bits (288), Expect = 1.6e-22 Identity = 51/120 (42.50%), Postives = 80/120 (66.67%), Query Frame = 0
BLAST of HG10021533 vs. ExPASy TrEMBL
Match: A0A1S3C9A4 (uncharacterized protein PHLOEM PROTEIN 2-LIKE A4 OS=Cucumis melo OX=3656 GN=LOC103498272 PE=4 SV=1) HSP 1 Score: 115.5 bits (288), Expect = 1.6e-22 Identity = 51/120 (42.50%), Postives = 80/120 (66.67%), Query Frame = 0
BLAST of HG10021533 vs. ExPASy TrEMBL
Match: Q8LK67 (Phloem lectin OS=Cucurbita argyrosperma subsp. sororia OX=37648 GN=PP2 PE=2 SV=1) HSP 1 Score: 114.0 bits (284), Expect = 4.6e-22 Identity = 59/120 (49.17%), Postives = 78/120 (65.00%), Query Frame = 0
BLAST of HG10021533 vs. TAIR 10
Match: AT4G19850.1 (lectin-related ) HSP 1 Score: 70.5 bits (171), Expect = 1.1e-12 Identity = 44/112 (39.29%), Postives = 61/112 (54.46%), Query Frame = 0
BLAST of HG10021533 vs. TAIR 10
Match: AT5G45090.1 (phloem protein 2-A7 ) HSP 1 Score: 57.4 bits (137), Expect = 9.7e-09 Identity = 43/119 (36.13%), Postives = 60/119 (50.42%), Query Frame = 0
BLAST of HG10021533 vs. TAIR 10
Match: AT1G33920.1 (phloem protein 2-A4 ) HSP 1 Score: 56.6 bits (135), Expect = 1.7e-08 Identity = 42/114 (36.84%), Postives = 56/114 (49.12%), Query Frame = 0
BLAST of HG10021533 vs. TAIR 10
Match: AT4G19850.2 (lectin-related ) HSP 1 Score: 48.9 bits (115), Expect = 3.5e-06 Identity = 27/75 (36.00%), Postives = 40/75 (53.33%), Query Frame = 0
BLAST of HG10021533 vs. TAIR 10
Match: AT5G45080.1 (phloem protein 2-A6 ) HSP 1 Score: 45.1 bits (105), Expect = 5.0e-05 Identity = 34/113 (30.09%), Postives = 52/113 (46.02%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
|