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HG10021516 (gene) Bottle gourd (Hangzhou Gourd) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATAGATGGGACATGGAAACGTTCAACTTCATAGGTGACGCTTGTGGAGGCATGCTGGCAGTTGCTAAGAAGACCCTCAATAGGATGGACCTCATGGAAATTAGCTCAAGGGTTAGAAACAATCCAACCGGTTTTCTCCAGCAAAAAATCAACCTCCCCTCGTCTTCTTCTGCTAATAGTTTCATTTGGATTGATCCGTTTTTTAACGAGGACTACCATACTGGAGTTATTACCAAAATCCATGGCAAGCCAGTCAAGTCTCTGACGAAGAACAACACTCTCCCCGAGGTCACTTACAAAGAAAAATTACTCTAG ATGGATAGATGGGACATGGAAACGTTCAACTTCATAGGTGACGCTTGTGGAGGCATGCTGGCAGTTGCTAAGAAGACCCTCAATAGGATGGACCTCATGGAAATTAGCTCAAGGGTTAGAAACAATCCAACCGGTTTTCTCCAGCAAAAAATCAACCTCCCCTCGTCTTCTTCTGCTAATAGTTTCATTTGGATTGATCCGTTTTTTAACGAGGACTACCATACTGGAGTTATTACCAAAATCCATGGCAAGCCAGTCAAGTCTCTGACGAAGAACAACACTCTCCCCGAGGTCACTTACAAAGAAAAATTACTCTAG ATGGATAGATGGGACATGGAAACGTTCAACTTCATAGGTGACGCTTGTGGAGGCATGCTGGCAGTTGCTAAGAAGACCCTCAATAGGATGGACCTCATGGAAATTAGCTCAAGGGTTAGAAACAATCCAACCGGTTTTCTCCAGCAAAAAATCAACCTCCCCTCGTCTTCTTCTGCTAATAGTTTCATTTGGATTGATCCGTTTTTTAACGAGGACTACCATACTGGAGTTATTACCAAAATCCATGGCAAGCCAGTCAAGTCTCTGACGAAGAACAACACTCTCCCCGAGGTCACTTACAAAGAAAAATTACTCTAG MDRWDMETFNFIGDACGGMLAVAKKTLNRMDLMEISSRVRNNPTGFLQQKINLPSSSSANSFIWIDPFFNEDYHTGVITKIHGKPVKSLTKNNTLPEVTYKEKLL Homology
BLAST of HG10021516 vs. NCBI nr
Match: QWT43305.1 (kinesin-related protein KIN7C [Citrullus lanatus subsp. vulgaris]) HSP 1 Score: 81.3 bits (199), Expect = 5.6e-12 Identity = 37/83 (44.58%), Postives = 53/83 (63.86%), Query Frame = 0
BLAST of HG10021516 vs. NCBI nr
Match: KAA0047508.1 (putative amidohydrolase ytcJ [Cucumis melo var. makuwa] >TYK26480.1 putative amidohydrolase ytcJ [Cucumis melo var. makuwa]) HSP 1 Score: 60.1 bits (144), Expect = 1.3e-05 Identity = 23/53 (43.40%), Postives = 39/53 (73.58%), Query Frame = 0
BLAST of HG10021516 vs. NCBI nr
Match: ADN33672.1 (hypothetical protein [Cucumis melo subsp. melo]) HSP 1 Score: 59.3 bits (142), Expect = 2.3e-05 Identity = 31/80 (38.75%), Postives = 44/80 (55.00%), Query Frame = 0
BLAST of HG10021516 vs. NCBI nr
Match: KAA0050054.1 (hypothetical protein E6C27_scaffold675G00340 [Cucumis melo var. makuwa]) HSP 1 Score: 56.2 bits (134), Expect = 1.9e-04 Identity = 29/88 (32.95%), Postives = 45/88 (51.14%), Query Frame = 0
BLAST of HG10021516 vs. NCBI nr
Match: KAA0051807.1 (hypothetical protein E6C27_scaffold60G002200 [Cucumis melo var. makuwa] >TYK21434.1 hypothetical protein E5676_scaffold609G00990 [Cucumis melo var. makuwa]) HSP 1 Score: 56.2 bits (134), Expect = 1.9e-04 Identity = 30/80 (37.50%), Postives = 42/80 (52.50%), Query Frame = 0
BLAST of HG10021516 vs. ExPASy TrEMBL
Match: A0A5D3DT94 (Putative amidohydrolase ytcJ OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold313G00450 PE=4 SV=1) HSP 1 Score: 60.1 bits (144), Expect = 6.5e-06 Identity = 23/53 (43.40%), Postives = 39/53 (73.58%), Query Frame = 0
BLAST of HG10021516 vs. ExPASy TrEMBL
Match: E5GB30 (DUF4283 domain-containing protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1) HSP 1 Score: 59.3 bits (142), Expect = 1.1e-05 Identity = 31/80 (38.75%), Postives = 44/80 (55.00%), Query Frame = 0
BLAST of HG10021516 vs. ExPASy TrEMBL
Match: A0A5D3DCX6 (DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold609G00990 PE=4 SV=1) HSP 1 Score: 56.2 bits (134), Expect = 9.4e-05 Identity = 30/80 (37.50%), Postives = 42/80 (52.50%), Query Frame = 0
BLAST of HG10021516 vs. ExPASy TrEMBL
Match: A0A5A7U495 (DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold675G00340 PE=4 SV=1) HSP 1 Score: 56.2 bits (134), Expect = 9.4e-05 Identity = 29/88 (32.95%), Postives = 45/88 (51.14%), Query Frame = 0
BLAST of HG10021516 vs. ExPASy TrEMBL
Match: A0A5D3CFS8 (DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold367G00330 PE=4 SV=1) HSP 1 Score: 56.2 bits (134), Expect = 9.4e-05 Identity = 29/88 (32.95%), Postives = 45/88 (51.14%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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