HG10021508 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10021508
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	snRNA-activating protein complex subunit-like isoform X1
Location	Chr05: 10330462 .. 10339100 (+)
RNA-Seq Expression	HG10021508
Synteny	HG10021508

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGGCGAGAGACGGGGCTGGAGCTTCAGAGGAGCTGGCTCTTAATGGAGATGGCCTCTCAATTCCTTTGGGTGGACCAATATATGCACCTAACTTGGTTGGTCCTCTCACCAGGGTCCCTCACTTTGAGTCTTCTCTAATTCAAGAACTTCAGGTTCTCATATATTTTTTTAGAAACATGTCTTTACACCATTGTTTCTGTTCTAAATCTAATCCTTATTCTTGAGCAGAGTCTGGAGGCAGAGTTACACTTGGATTCATCTCAACTATGCGATGAAGATATTTCGTATGTATATTTTTCTCTCCCCTGAATGTGCTCTGGTCATGGTTGAATTTGTTAATTTGCAACTACCATTCTGCAGGATTGATGGCTTAAGGTGTTTACTGAAGAACAGTTATTGAATATGGCTTTGGAGGAATCATTGCAGGTCTGCAAACAGTGTCTCATATCATTTAGTGCATTACTGTTAAAAGAAAACACTCAGTAAACTTTTCATCTGCTGTACTAATGCAGAGTGATGAGAATGGTAATAACCAGCCAGAACTTCCAGAAGAAAATTTGAATGCTGGGGTGGCAAGGTAATTGATTTTGATTGTTATTTAAAACTTTTTAAGAGTGTTTGTTGAACATGGATTGACTTGGATTTCTGCCCTGTCAATTTTTTTACATAGAAAAAGTTATTAGACTAACAGAAACAGCATTTTTGCACATTCACCCCATTGGCAACTATTTTTGTGAAAATACAATTTATGTTGTACAGTCCCCTTCCCCAAAAATTTGATTGGCCAATTTTTTGGAAGACAAGAGACCATAGAAGCGTAGAATAGATTTTGTATATGGTAATCCTTGTAAATGAGTGAAAGGGGAGCAAAGAAACTAATTTTCTTTTTATGATCTCCCAATAATATGGATCTTGCTCACAAAACACCCCTCTTAACAACACAGAGAGATCTTATGGTAGCATTTTGATTGAGCTACAATTTGGACTGTCTGGAGTGAAAGGAACTCAAGAATTTTTCAGAAAAAGAAAGATCCTTGGAGGAAGTGATTGAATCGTCTCTTTTTATGGCTCCTTGTGGGTGCACAAATGTTCTTCCTTTTTAGCTGAACTCTTTTTTCATACAATTAGACAAGTTCTTTATAATCCCTTTGGATGGGCCCTCCTTTTCTATATTTCAGTTAATTATGAAATTGTTTCCTATCAAAAAAAAAAAAAAAAAAAAAAGAAAAAGAGAAGAAACTATCTAAATAAGAGTTGTTTTCCTTGTATTAATAATAATATGAAATAGTTTTGAATCTGGTTAATGAAGTTAACTAATGCGAACCTTGGGATGTTAATGTGTTGGTGTTCTTATTAGCAAAGGAAGGAACCTCTATTTAGAATTCATCTTTACTTGCTGTGACAACCTCAACATCTATGGTATTGTGAAGCTAAGATGTCAGAAGATAGTTCCTGCGGTTCTAGAAGCAACCTTCCTTGCAAAGTACTTTTTGGTGGGTAGAATCCATATGGATAGGTCTAAAATTTTCATTTTTTATGACATCTTCAGTTCTTATAAGGAGTTAAATGACACTGTTTAATATATGTTCCTCCTTATTTATTAATAAATTTTTATTTTTGTAAAAATAGTTAATTAACTCTAGGTTCACTCAGACTTGCAATAAACTTGAGTTAGATTCATTGTTTACTATTTTGAATGTTCTATTTTTCTAAATTGGCCATTTTACTTCATACTGTTTTTGGTTAAAAGTTCATAATTCTTTTGAGGAAAAATGGTATTCTTAGAGAAAATGAGGAGGAAGTTAACGGGCACAATTTGGAGGCTGCTCCTGCATCAAATGCAAATAGAAGCACGAATAAAATGACTACAAGGAAGCGAAAAAAGGAGGAAATTTCTAATATTGAGGTTTGCTGCTCAACTTTGCATTATGTCTTTTATTAGCTAAACTATTTGTGTGAAACTTGGTTAATTTTAATGATTTCTCATAAGACTTTTCTTTCAGAATAAGTAAATGAGTATCAGCTGTAGATTCTGTGTACAAGCTTTGCCATCTGACTTTGACTCTTAAATTTTTACAAGTTTGTTATGCGGTGCTATTGAATCATGTCATCTTCCAATTGAACGAATTAGTACTACAGTATGATTTGATCTCTATTAATTTGGGTGGGTTTTTTTCCTATTTTTATTTCTGTATATGAGGAATGATGATACTGGCGCATGTCTTTCTCATTCATTTTATGGGATTGTTACTTGACTCAATTAACATTGAGAAGTAAAACACTTACACGATATAAATAAAGATTAAAATAGCATTTTGTCTCTGTACTTTGAACAACACGGGTGTTTCGTGGTGTGGAGAGAGACCCTAGTGAGGTTTTGTCTCCTGTCGGTTTTGAAGACTTTTTGTAATTATTCCCTAGGCAATACCTTAGTTGGAAACCCTTTTTCTGAGGAGTTTTTGTGGGCTTGATTTTTTGTATGCCCTTTTATTCTTTCATTTTTTCTCAATGAAAGTAGTTGTTTCTATAAAAAAATAATCTTAAATTTTAGTCTCATGCATTTTTACTTCTTTTTAAGATTCTATTGCATTGTCTCTCCTTCCAGACTTTCCACAAGAGAGCATGAGAGGCATTTGTCTTAAAACGCTAGCTTAGGAGCAAGATTTTAAATGTCAATGTTGATAGAAATGTTCAGTTTTCAATTTTATGAAAATGTCAATGGAAACATTGATAACATATCGATGTTGAGGGATATTTTGAAAAAATTATAAATAGAAAAATTCAAAATAAATATATAAATATATAAATTAACAAATGAACATTTATTCTTTTTAAATAACTTTAAATTTCTTATTTTTAATAAAAAAATACCTTTTTGGTCCTTAGGTTTTGAGTTTAGTTTCCATCTAGTCCCTAGGTTCTAAAATGTTACACTTTTAGTTTGAGTTTTGAGTTTAATTTCTGTTTGGTCCTAGTTTCAAAATATTACATTTTTACCCTCTGGATTTTTTGACCCATCTGTTCCCTTGTTCATATGTAAAGTATTCTAGTTATGCAAAATCGATGCAATCTTGTGCTTAACAATTATTTTTAATACCTTTTCTCTTTTGTTTTTTTAACACGTTACATATTATTTCAGGAAAAGTCTATTGCAAAGGTGGCTGAAATTGTAAAGATTAAACAAAAGCAGGATGCAGACAGAGCTGCAGTGAAATTACATGCTTTCAAGTTTGTACAATGATTTTAAAAAATCCTGTCCATGATATGCATAATACGTTAGGGGCTTATGATTAATAAATTTATTTATTTATTTTTCAGGTGGAAGAAGGAAATTGCCAGTTCATCGTCAGAAAGCAAAGAGAGGTTGAGATCCTTGAGGTCTACAAATTCTTCTGCAAAGGTTCCTCATGTAGGGTTTCTCTGAGTTATTATTATTACTACTACTACTGTTTTTCTTTTACTGACAAGTCCAATTATAAGATTTACCATTAATTAAAGCTTGAAGAATGCAATGCCTGCTTGGATGACATATGCTGTTTCTTTATTTTTGTAAATTGTAACGGGGTGTTTGGCCTCCAAGTTGAGTTGGGTTGGGTTGGGTGGGTAAAAAAAAATCCACCCACCATTTGGTTCACTAATAATTAAAGAGATTTATTACCTCGTTACTAAATGATAATTTTGGAGTCTTTGTCTATCTGGCCAGAGGTTGTTTGATATCATTTCACTTTGAAATAAAAGTGAAGATGGAGTTGCACTTATGAACCTTACTGTATTCTTATAGTTTAAGTATTTTTTAGAAATAGTCAGGTAGGAAGCCTCTTTTGGGCTAGCAACTCAAACAAATAATAAAACAATAACTTTATAGTTGATCTGTTGGGTTTTGTGGATTCCAAATCATCTAGAAGACTTAGTTTGAAACTTGTTGGAAGGGCCTTTTCGAAGTCTGGACTGAAGCAAATGGAGAAAAGGAGCAGACGAGTTCTTCCAAGTTATCACCAAGCAATTTGAGAAGAACGCCAAGACGCTAGAGCAAGACAGAAAAAACTTCTCGGAGTGCCCTAGCGCTAGATCGGCGTTGGCTGATCCTAGAGTTCTATTATATGATGTTTTTCCATTTTACTTGAAACTAGGAAGTGACAGAAAGAAGAACGACAATGATTTTCTCTAGGGTGTGAAAGATGCATGACCGAGGGTTCAGACAGTCACTCATGTGGTATCTAGAGAGAATTTTGAAGTGCGATTGTGAGTATCATCTTGTGAGAAAATAATGAGAAATCATTTGGAGCATTTCTGAGAATCCTAGATATTTGAGAACTGAAGGAGCAGGACGAATATTGTGAAAGAATATACTAAAAAGAGCTAAACATTTTATAAATTTCAAGGTTTAGTGACTCTAAAAAAGAATCTTCAAATATCTGGTTCGTCTCCAACCAAGGTTGCAAAGAATGGCAGACCAGCCATCACTTGTGAGGCTACAGAATTTAGACTTTTTTTAAAAGATGATGCAGATCCTAACATACATTTGCTCAAGTAGCTTCCAAGAAACCTTTTGTGAGGCCAGGCAATTTTCTCTTGAGATAAGTCAAGATGCGTACAAGCTTGTCTAGAGACTCAATGGATTAAAAAAAAAAAAAAAAAAAAAAAAACTCCAAAGAGCTTGAATTTAATCCCTCATGTTCTATGGCCATGCAAAAAGAGGTGGAATGTTGGATGTTGTCTTTGAGGCTGTTCTTGCAAATAATGCACTGGGGGGTGGGGGATAGTTGGCAGGGTGCTCTTTGGATCATATCAGCTCTGTCTACTCCATGACAAGGGTCCGAACTAAAAAATGAGGGGTTATTGGAAACTGATTCAAGAATAGTTTTAGGTTTATAAAACAATATTTTGTGAATAAGTGTTCCTATACTATTCTCTTAAAAGTTGTTCTCTTGTTTTATTGGTGGAAAAATGAAGTTATTCTTCTAAAATAACGAATTTGTGAATAGTGATTTAAATATGCATGTGTAAATTTTACTACTCATTTCATCACTAATTTAAACAACCAGTAACTTTCTCTGTGATTTTCAGGCTCAATTGGTCCTGGTCAAGTATTAGCCCAATTTGGCAGCGATCTATTGTTTTTGTTAGGTTGAACAAATTTTTAGAAGCAAAATTACCAGAACCATTAAGGCCCCAACAAATAGAGTCCCTGTTATGAGTCAGTGGACATGACCCTTGTTCACCTATATTGTTATTTAATATTCAAACATGCTAGTAGATTATCTGTGGGAGGAATTAATATCATCCTTTTTATCCGCTAAAATATTGCATCTTTCAATATGCTTCTGAACTGGATGCTATGTAAATTATAATAGGTGTATTTATGTTCTTTTGCTGATGTTTATATGTATATTGGTATAGTATATAGGCCTGGCTCTAGCAATGTGACGGTGTTTGCAAACTTTATTCTCAGAATCTCAGTGCATGAAAAAGGTGTTGCTGGGTGACTAGAAGGGAAGGCTGGAGTGTCTGATTTGTTGTAGGATTTATGGGGGAGAATAATAAAATCTTTAAGAGGAATGGAAAGAGAGCCGTGAGATGTTTGTGCCCATGTGAGATTAGATGTTTCTTTTTGGGCGTTGGTGGCGAACCCCTTTTGTAATTATTCGCTAGGTTTTATTTTCTTGATTGGACCCTCTTTCTTTAGGGTTTCTCCCTTTCGTGAGTTTTTTTTTTTTTTTTTGTTGGTATGCCGTTATATCCTTTAATGTTTTCCTCAATGAAAGTTGTCTTTTATCCAAGAAAGAAAAAAAAAGAAAACAAAAAGGAGAGAACCTCTTGTCATTCATTTGAGTATATGTCATTCATTTGAGTATAGAGCTAATGGCTTTATGGGTAGTTAGGAAAGGATGAGTGCCCTTGTAGTGAATTTGATGAGCAAAGTAAGATACCCTGAACTCATCTGATTTGGTGGCCAATTTGTATAGCCTTAAAAGTGGCGTGGAGGTTGGGATTTCAATTCGTAACACAATATAGTGAATGACATGTCCTGGCCAGCCATAAGAGGGTAAAAGATGGTGTGATCTATTTGACTTCTTCCTTTGAAACTAAATTGCTACAGGAAGGCATTTTATAGATTCACTTACTGATATTAACAATTTTGCAACCGAGTACCTCATTCTACCTGACCTTACTTTTCCTCTTTAATGAATTGGCCTTGTAACTGCTGAATGTTATGTTGGCCACTAAGCCACCTACAACTGGAATGCATAATCTTAAATGTGGAGTCCTAGCATGAATACACAAGCTATAATTGATCCTTATAATTTGATGATTCTTGTTTGATCATGCATTTCTTTTCATGTATCTCCCTCCGCTGATAGGAATTGATAACATGTTAGGTGAAATCACTGAGCAGTGGAAAACACGAAACTCTGCAGCATCCAACGACTGTACTTTTTGTAGAGATTTTCCATAAATCTCGCAAGATGGGAAGGTATGCTCTTTCTCTTTTTCTTAACAATTGTCAATTTAAATGGGTTTGGTAGAAATTAATAACTATTGATGAAGACTTAGTCAAATCACGGTTGAGAAACAGTGATAACGTCTTTATTATTTCTTAGATATTAGGTAGTAAATGTTGTTTCATTTCTTCCATTCTTCATTATTGTTGGTCAAGCAGACTTTGTTACATTAACATACTTGTTTTTATGTATCAAACCTCACTACCAGTATCTATTTCTCTTGATGACTATATATATTGAAGAGGTATTGACAAGATAGTACCATGCTATAATAGAAAGGACCAAGGTTATAATTTATTTTTGGCTTCTAGGTGATCTTTCAATAAAGAAAGAAAGAAAAAAAAAAAAAAGAAACTATTATTTTTTATGCTCTTTGTTTGCTCAAGATCCTGTATTTGCATTGTGGAGCACAAGGATTCCTAGAAAGCTAAATATTTTAACTGGGATACGTTTCATGGAGGATGTTAGCTCTGCCGTAGAATTCAATGAAAACGCCCTTACTTGGCAATTAACTTGAGCCTCATTTTTCTCCTATTGTAGAAAATATGGTGTTCTACCTTGAATGCTTTCGGCATTTGAGTTTGCCACCAAAGATAATATCTTATACTTGTGGATATATAGGCTTAAAAGGAGAGCTAAACAGCCAATATGAGCATAGCTCAGCAGTAGTGAACATATACTCCTTTCCTTGAGATTAGATGTTCAAATCCCTATACCGACACATTTGTTGTACTAAAAAGTAGGAGAGCTAAAGAATTATGGACCAATGTTGGAACTTGTATGTTGAATAAACAAATCTCAAAAAATGCAAACAAGTTAATGGGGAGGAAAGATTAGACCTTATCAGATGATAGATATTATGCTTCTTGGTGTGTTCAAAGATTTTGATAGTTATTCTTCTAAATCAATGAACTCTAGGTGGGGACTTTCTGTAGTTGTAGTACAAACTTGTATACTTTTATGTCAATCAGAGCATAGTTCAATTGGTTAAAGGCATATACCCTCAACTAAGGGGTTAGAGGGTTGAATCTTCCAACCTCACTCAACTTTGTTCTGGTTATTTACGTCATCATATGTATTTGACCTTCCTGTGATATTCTTCTTTACAGACTCAAGAGTTTTTGGCCCTTGGACGACAAACGTTAGCAGAACTGAAGGACAAGATTTATTGCTCGACAGATTCGTTAATGGAAAAGGCTGGGCAGCAAGATTCGTCTGGATATTTCCTTATAGAAGTAAGAAATTCGAGGAGCCCTGTATTTACCAAATTTGATTTTAAATAACCGAATGCAGTTTTGTTTATATCCAGGAGGTTTTCTGCAATGATTTGAGAATCCTTCCGCAATAGATTATAGCAAACCTATACTTGATTGGCTTAGAAACTCGGAGGATGAAGCGCGTAAGAAATGGGAATGTCACAAACTGGTGAATCACAACAGAAAAATTCAGTCGTTGGCGAAGTATCAGTTTCACATGTGCCTCATTTTAGATCAGTCAGCATGAACAAGGTTCGATTTTGTGACCTGAAATTTAGGCTTGGGGCCGGGTATCTGTACTGTCATCAGGTATATTGCTTATTTGGCTCTCTTCCATATGGTTTTTGTTTTTCATGTTCATTTTGCATAGATTGTGTGGCTTTCATTTCAAAGTAAAAGCCAAAGTCATATGGTCTAATGTTATTAAAGCAATCTATGTGTGGTTTCTCATAAGACTACTTTAATTACTGCCCTTAGTTGATTCCTTTGTAGTAGGATTCCTTTTTTATATTTCATTACTATCAATGAATCACATTTGTTTCTGTCCAAACAAAAACTGCATTGACTTTGGAGTAATCCTCATATACACAGGGAGATTGCAAGCATACCATAGTGATTAGAGATATGAGGTTGATCCATCCTGAGGACGTACATGATCGTGTTGCTTATCCAATCGTTACATTTCAGCTTAGGACCCGAGCTCGGAAATGTGATGTCTGTAACATTTACAGGGCTAAGAAGGTTACTCTTGACGATAAGTGGGCACAGGAAAACCCGTGCTACTTTTGTGAAGACTGCTATTTTCTTCTTCACTACTCGAAAGAAGGGAACCTCCTTTACAATGATTTCGTGGTGCACGATTACTTGCAAGATTAG

mRNA sequence

ATGGAGGCGAGAGACGGGGCTGGAGCTTCAGAGGAGCTGGCTCTTAATGGAGATGGCCTCTCAATTCCTTTGGGTGGACCAATATATGCACCTAACTTGGTTGGTCCTCTCACCAGGGTCCCTCACTTTGAGTCTTCTCTAATTCAAGAACTTCAGAGTGATGAGAATGGTAATAACCAGCCAGAACTTCCAGAAGAAAATTTGAATGCTGGGGTGGCAAGCAAAGGAAGGAACCTCTATTTAGAATTCATCTTTACTTGCTGTGACAACCTCAACATCTATGGTATTGTGAAGCTAAGATGTCAGAAGATAGTTCCTGCGGTTCTAGAAGCAACCTTCCTTGCAAAGTACTTTTTGTTCATAATTCTTTTGAGGAAAAATGGTATTCTTAGAGAAAATGAGGAGGAAGTTAACGGGCACAATTTGGAGGCTGCTCCTGCATCAAATGCAAATAGAAGCACGAATAAAATGACTACAAGGAAGCGAAAAAAGGAGGAAATTTCTAATATTGAGGAAAAGTCTATTGCAAAGGTGGCTGAAATTGTAAAGATTAAACAAAAGCAGGATGCAGACAGAGCTGCAGTGAAATTACATGCTTTCAAGTGGAAGAAGGAAATTGCCAGTTCATCGTCAGAAAGCAAAGAGAGGTTGAGATCCTTGAGGTCTACAAATTCTTCTGCAAAGACTCAAGAGTTTTTGGCCCTTGGACGACAAACGTTAGCAGAACTGAAGGACAAGATTTATTGCTCGACAGATTCGTTAATGGAAAAGGCTGGGCAGCAAGATTCGTCTGGATATTTCCTTATAGAAGGAGATTGCAAGCATACCATAGTGATTAGAGATATGAGGTTGATCCATCCTGAGGACGTACATGATCGTGTTGCTTATCCAATCGTTACATTTCAGCTTAGGACCCGAGCTCGGAAATGTGATGTCTGTAACATTTACAGGGCTAAGAAGGTTACTCTTGACGATAAGTGGGCACAGGAAAACCCGTGCTACTTTTGTGAAGACTGCTATTTTCTTCTTCACTACTCGAAAGAAGGGAACCTCCTTTACAATGATTTCGTGGTGCACGATTACTTGCAAGATTAG

Coding sequence (CDS)

ATGGAGGCGAGAGACGGGGCTGGAGCTTCAGAGGAGCTGGCTCTTAATGGAGATGGCCTCTCAATTCCTTTGGGTGGACCAATATATGCACCTAACTTGGTTGGTCCTCTCACCAGGGTCCCTCACTTTGAGTCTTCTCTAATTCAAGAACTTCAGAGTGATGAGAATGGTAATAACCAGCCAGAACTTCCAGAAGAAAATTTGAATGCTGGGGTGGCAAGCAAAGGAAGGAACCTCTATTTAGAATTCATCTTTACTTGCTGTGACAACCTCAACATCTATGGTATTGTGAAGCTAAGATGTCAGAAGATAGTTCCTGCGGTTCTAGAAGCAACCTTCCTTGCAAAGTACTTTTTGTTCATAATTCTTTTGAGGAAAAATGGTATTCTTAGAGAAAATGAGGAGGAAGTTAACGGGCACAATTTGGAGGCTGCTCCTGCATCAAATGCAAATAGAAGCACGAATAAAATGACTACAAGGAAGCGAAAAAAGGAGGAAATTTCTAATATTGAGGAAAAGTCTATTGCAAAGGTGGCTGAAATTGTAAAGATTAAACAAAAGCAGGATGCAGACAGAGCTGCAGTGAAATTACATGCTTTCAAGTGGAAGAAGGAAATTGCCAGTTCATCGTCAGAAAGCAAAGAGAGGTTGAGATCCTTGAGGTCTACAAATTCTTCTGCAAAGACTCAAGAGTTTTTGGCCCTTGGACGACAAACGTTAGCAGAACTGAAGGACAAGATTTATTGCTCGACAGATTCGTTAATGGAAAAGGCTGGGCAGCAAGATTCGTCTGGATATTTCCTTATAGAAGGAGATTGCAAGCATACCATAGTGATTAGAGATATGAGGTTGATCCATCCTGAGGACGTACATGATCGTGTTGCTTATCCAATCGTTACATTTCAGCTTAGGACCCGAGCTCGGAAATGTGATGTCTGTAACATTTACAGGGCTAAGAAGGTTACTCTTGACGATAAGTGGGCACAGGAAAACCCGTGCTACTTTTGTGAAGACTGCTATTTTCTTCTTCACTACTCGAAAGAAGGGAACCTCCTTTACAATGATTTCGTGGTGCACGATTACTTGCAAGATTAG

Protein sequence

MEARDGAGASEELALNGDGLSIPLGGPIYAPNLVGPLTRVPHFESSLIQELQSDENGNNQPELPEENLNAGVASKGRNLYLEFIFTCCDNLNIYGIVKLRCQKIVPAVLEATFLAKYFLFIILLRKNGILRENEEEVNGHNLEAAPASNANRSTNKMTTRKRKKEEISNIEEKSIAKVAEIVKIKQKQDADRAAVKLHAFKWKKEIASSSSESKERLRSLRSTNSSAKTQEFLALGRQTLAELKDKIYCSTDSLMEKAGQQDSSGYFLIEGDCKHTIVIRDMRLIHPEDVHDRVAYPIVTFQLRTRARKCDVCNIYRAKKVTLDDKWAQENPCYFCEDCYFLLHYSKEGNLLYNDFVVHDYLQD

Homology

[Close]

BLAST of HG10021508 vs. NCBI nr
Match: TYK29378.1 (snRNA-activating protein complex subunit-like isoform X3 [Cucumis melo var. makuwa])

HSP 1 Score: 557.8 bits (1436), Expect = 7.1e-155
Identity = 318/524 (60.69%), Postives = 345/524 (65.84%), Query Frame = 0


Query: 1   MEARDGAGASEELALNGDGLSIPLGGPIYAPNLVGPLTRVPHFESSLIQE---------- 60
           MEARD AGAS+E+ LNGDGLSIPLGGPIYAPNLVGPLTRVPHFESS++QE          
Sbjct: 1   MEARDRAGASDEIGLNGDGLSIPLGGPIYAPNLVGPLTRVPHFESSVVQEFQSLEAELHL 60

Query: 61  -------------------------------LQSDENGNNQPELPEENLNAGVASKGRNL 120
                                          LQSDEN NNQ ELPEEN+NAG+ SK RNL
Sbjct: 61  DSSQLCDEDISIDELKLFTEEQLLNMALEESLQSDENANNQSELPEENMNAGLLSKVRNL 120

Query: 121 YLEFIFTCCDNLNIYGIVKLRCQKIVPAVLEATFLAKYFL-FIILLRKNGILRENEEEVN 180
           YLEFIF C +NLN+YGIV+ +C+KIVPAVLEATFLA+  +  +I+LRKNGILRE EEEVN
Sbjct: 121 YLEFIFACHENLNLYGIVESKCEKIVPAVLEATFLARCIVRSLIILRKNGILRECEEEVN 180

Query: 181 GHNLEAAPASNANRSTNKMTTRKRKKEEISNIEEKSIAKVAEIVKIKQKQDADRAAVKLH 240
           GHNLEA PASNANRSTNKMTTRKRKKEE+S IEEKSIAKVAEI K+KQKQ+ADRA V+LH
Sbjct: 181 GHNLEADPASNANRSTNKMTTRKRKKEELSIIEEKSIAKVAEIAKLKQKQEADRAVVQLH 240

Query: 241 AFKWKKEIASSSSESKERLRSLRSTNSSA------------------------------- 300
           AFKWKK+IASSSSESKERL+SLRSTN+SA                               
Sbjct: 241 AFKWKKDIASSSSESKERLKSLRSTNTSAKVKSLNDGKHESLHHPMTVLFVEVYHKSRKM 300

Query: 301 -KTQEFLALGRQTLAELKDKIYCSTDSLMEKAGQQDSSGYFLIE---------------- 360
            K+QEFLALGRQTLAELKDKIYCSTD+LM+KA QQDSSGYFL+E                
Sbjct: 301 VKSQEFLALGRQTLAELKDKIYCSTDTLMQKAEQQDSSGYFLVEDVFCNDLRNPSAIDYS 360

Query: 361 ------------------------------------------------------------ 365
                                                                       
Sbjct: 361 KPILDWLRNSEDEARKKWECIITGELQQKNSVVGEVSDLHVPHFRSVSMSKVRFCDLKFR 420

[Close]

BLAST of HG10021508 vs. NCBI nr
Match: TYK17049.1 (snRNA-activating protein complex subunit-like isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 555.8 bits (1431), Expect = 2.7e-154
Identity = 320/524 (61.07%), Postives = 345/524 (65.84%), Query Frame = 0


Query: 1   MEARDGAGASEELALNGDGLSIPLGGPIYAPNLVGPLTRVPHFESSLIQE---------- 60
           MEARD AGASEE+ LNGDGLSIPLGGPIYAPNLVGPLTRVPHFESS++QE          
Sbjct: 19  MEARDRAGASEEIGLNGDGLSIPLGGPIYAPNLVGPLTRVPHFESSVVQEFQSLEAELHL 78

Query: 61  -------------------------------LQSDENGNNQPELPEENLNAGVASKGRNL 120
                                          LQSD N NNQ ELPEEN+NAG+    RNL
Sbjct: 79  DSSQLCDEDISIDELKLFTEEQLLNMALEESLQSDGNANNQSELPEENMNAGLL---RNL 138

Query: 121 YLEFIFTCCDNLNIYGIVKLRCQKIVPAVLEATFLAKYFL-FIILLRKNGILRENEEEVN 180
           YLEFIFTC +NLN+YGIV+L+C+KIVPAVLEATFLA+Y +  +I+LRKNGILRE EEEVN
Sbjct: 139 YLEFIFTCHENLNLYGIVELKCEKIVPAVLEATFLARYIVRSLIILRKNGILRECEEEVN 198

Query: 181 GHNLEAAPASNANRSTNKMTTRKRKKEEISNIEEKSIAKVAEIVKIKQKQDADRAAVKLH 240
           GHNLEA PASNANRSTNKMTTRKRKKEE+S IEEKSIAKVAEIVK+KQKQ+ADRA V+LH
Sbjct: 199 GHNLEADPASNANRSTNKMTTRKRKKEELSIIEEKSIAKVAEIVKLKQKQEADRAVVQLH 258

Query: 241 AFKWKKEIASSSSESKERLRSLRSTNSSA------------------------------- 300
           AFKWKK+IASSSSESKERL+SLRSTNSSA                               
Sbjct: 259 AFKWKKDIASSSSESKERLKSLRSTNSSAKVKSLSGEKHESLHHPTTVLFVEVYHKSRKM 318

Query: 301 -KTQEFLALGRQTLAELKDKIYCSTDSLMEKAGQQDSSGYFLIE---------------- 360
            K+QEFLALGRQTLAELKDKIYCSTD+LM+KA  QDSSGYFL+E                
Sbjct: 319 VKSQEFLALGRQTLAELKDKIYCSTDALMQKAELQDSSGYFLVEDVFCNDLRNPSAIDYS 378

Query: 361 ------------------------------------------------------------ 365
                                                                       
Sbjct: 379 KPILDWLRNSEDEARKKWECIITGESQQKNSVVGEVSDLHVPHFRSVSMSKVRFCDLKFR 438

[Close]

BLAST of HG10021508 vs. NCBI nr
Match: XP_008459095.1 (PREDICTED: snRNA-activating protein complex subunit-like isoform X3 [Cucumis melo] >XP_008459096.1 PREDICTED: snRNA-activating protein complex subunit-like isoform X3 [Cucumis melo])

HSP 1 Score: 472.2 bits (1214), Expect = 3.9e-129
Identity = 285/526 (54.18%), Postives = 304/526 (57.79%), Query Frame = 0


Query: 1   MEARDGAGASEELALNGDGLSIPLGGPIYAPNLVGPLTRVPHFESSLIQE---------- 60
           MEARD AGAS+E+ LNGDGLSIPLGGPIYAPNLVGPLTRVPHFESS++QE          
Sbjct: 1   MEARDRAGASDEIGLNGDGLSIPLGGPIYAPNLVGPLTRVPHFESSVVQEFQSLEAELHL 60

Query: 61  -------------------------------LQSDENGNNQPELPEENLNAGVASKGRNL 120
                                          LQSDEN NNQ ELPEEN+NAG+       
Sbjct: 61  DSSQLCDEDISIDELKLFTEEQLLNMALEESLQSDENANNQSELPEENMNAGLLRS---- 120

Query: 121 YLEFIFTCCDNLNIYGIVKLRCQKIVPAVLEATFLAKYFLFIILLRKNGILRENEEEVNG 180
                                                    +ILLRKNGILRE EEEVNG
Sbjct: 121 -----------------------------------------LILLRKNGILRECEEEVNG 180

Query: 181 HNLEAAPASNANRSTNKMTTRKRKKEEISNIEEKSIAKVAEIVKIKQKQDADRAAVKLHA 240
           HNLEA PASNANRSTNKMTTRKRKKEE+S IEEKSIAKVAEI K+KQKQ+ADRA V+LHA
Sbjct: 181 HNLEADPASNANRSTNKMTTRKRKKEELSIIEEKSIAKVAEIAKLKQKQEADRAVVQLHA 240

Query: 241 FKWKKEIASSSSESKERLRSLRSTNSSA-------------------------------- 300
           FKWKK+IASSSSESKERL+SLRSTN+SA                                
Sbjct: 241 FKWKKDIASSSSESKERLKSLRSTNTSAKVPHVKSLNDGKHESLHHPMTVLFVEVYHKSR 300

Query: 301 ---KTQEFLALGRQTLAELKDKIYCSTDSLMEKAGQQDSSGYFLIE-------------- 360
              K+QEFLALGRQTLAELKDKIYCSTD+LM+KA QQDSSGYFL+E              
Sbjct: 301 KMVKSQEFLALGRQTLAELKDKIYCSTDTLMQKAEQQDSSGYFLVEDVFCNDLRNPSAID 360

Query: 361 ------------------------------------------------------------ 365
                                                                       
Sbjct: 361 YSKPILDWLRNSEDEARKKWECIITGELQQKNSVVGEVSDLHVPHFRSVSMSKVRFCDLK 420

[Close]

BLAST of HG10021508 vs. NCBI nr
Match: XP_008459093.1 (PREDICTED: snRNA-activating protein complex subunit-like isoform X1 [Cucumis melo])

HSP 1 Score: 472.2 bits (1214), Expect = 3.9e-129
Identity = 285/526 (54.18%), Postives = 304/526 (57.79%), Query Frame = 0


Query: 1   MEARDGAGASEELALNGDGLSIPLGGPIYAPNLVGPLTRVPHFESSLIQE---------- 60
           MEARD AGAS+E+ LNGDGLSIPLGGPIYAPNLVGPLTRVPHFESS++QE          
Sbjct: 26  MEARDRAGASDEIGLNGDGLSIPLGGPIYAPNLVGPLTRVPHFESSVVQEFQSLEAELHL 85

Query: 61  -------------------------------LQSDENGNNQPELPEENLNAGVASKGRNL 120
                                          LQSDEN NNQ ELPEEN+NAG+       
Sbjct: 86  DSSQLCDEDISIDELKLFTEEQLLNMALEESLQSDENANNQSELPEENMNAGLLRS---- 145

Query: 121 YLEFIFTCCDNLNIYGIVKLRCQKIVPAVLEATFLAKYFLFIILLRKNGILRENEEEVNG 180
                                                    +ILLRKNGILRE EEEVNG
Sbjct: 146 -----------------------------------------LILLRKNGILRECEEEVNG 205

Query: 181 HNLEAAPASNANRSTNKMTTRKRKKEEISNIEEKSIAKVAEIVKIKQKQDADRAAVKLHA 240
           HNLEA PASNANRSTNKMTTRKRKKEE+S IEEKSIAKVAEI K+KQKQ+ADRA V+LHA
Sbjct: 206 HNLEADPASNANRSTNKMTTRKRKKEELSIIEEKSIAKVAEIAKLKQKQEADRAVVQLHA 265

Query: 241 FKWKKEIASSSSESKERLRSLRSTNSSA-------------------------------- 300
           FKWKK+IASSSSESKERL+SLRSTN+SA                                
Sbjct: 266 FKWKKDIASSSSESKERLKSLRSTNTSAKVPHVKSLNDGKHESLHHPMTVLFVEVYHKSR 325

Query: 301 ---KTQEFLALGRQTLAELKDKIYCSTDSLMEKAGQQDSSGYFLIE-------------- 360
              K+QEFLALGRQTLAELKDKIYCSTD+LM+KA QQDSSGYFL+E              
Sbjct: 326 KMVKSQEFLALGRQTLAELKDKIYCSTDTLMQKAEQQDSSGYFLVEDVFCNDLRNPSAID 385

Query: 361 ------------------------------------------------------------ 365
                                                                       
Sbjct: 386 YSKPILDWLRNSEDEARKKWECIITGELQQKNSVVGEVSDLHVPHFRSVSMSKVRFCDLK 445

[Close]

BLAST of HG10021508 vs. NCBI nr
Match: XP_038894485.1 (snRNA-activating protein complex subunit isoform X4 [Benincasa hispida])

HSP 1 Score: 463.0 bits (1190), Expect = 2.4e-126
Identity = 279/487 (57.29%), Postives = 303/487 (62.22%), Query Frame = 0


Query: 1   MEARDGAGASEELALNGDGLSIPLGGPIYAPNLVGPLTRVPHFESSLIQELQSDENGNNQ 60
           MEARDGA ASEE+ALNGDGLSIPLGGPIYAPNLVGPLTRV HFESSLIQELQS E     
Sbjct: 1   MEARDGARASEEMALNGDGLSIPLGGPIYAPNLVGPLTRVSHFESSLIQELQSLEAA--- 60

Query: 61  PELPEENLNAGVASKGRNLYLEFIFTCCDNLNIYGIVKLRCQKIVPAVLEATFLAKYFL- 120
                             L+L+    C D+++I G+     ++++   LE +  +     
Sbjct: 61  ------------------LHLDSSQLCDDDISIDGLKVFTEEQLLNMALEESLQSDENAN 120

Query: 121 -FIILLRKN---GILRENEEEVNGHNLEAAPASNANRSTNKMTTRKRKKEEISNIEEKSI 180
             + L  +N   G++RENEEEVNGHNLEAAPASNA+RS NKMT RKRK+EE SNIEEKS+
Sbjct: 121 NQLELPEENLNAGVIRENEEEVNGHNLEAAPASNASRSMNKMTRRKRKQEEHSNIEEKSM 180

Query: 181 AKVAEIVKIKQKQDADRAAVKLHAFKWKKEIASSSSESKERLRSLRSTNSS--------- 240
           AKVAEI K+KQKQDADRA VKLHAFKWKKEIASSSSESKERL+SLRSTN S         
Sbjct: 181 AKVAEIAKLKQKQDADRAVVKLHAFKWKKEIASSSSESKERLKSLRSTNFSTKVKSLSSG 240

Query: 241 -----------------------AKTQEFLALGRQTLAELKDKIYCSTDSLMEKAGQQDS 300
                                   KTQE L LG+Q LAELKDKIYCSTD+LMEKAGQQDS
Sbjct: 241 EHGTLRHPTTVLFVEVYHKSRKMVKTQELLVLGQQKLAELKDKIYCSTDTLMEKAGQQDS 300

Query: 301 SGYFLIE----------------------------------------------------- 360
           SGYFLIE                                                     
Sbjct: 301 SGYFLIEDVFCNDLRNPSAIDYSKPIFDWLKNSEDEARKKWGCIITGESQQKSSVVDEVS 360

Query: 361 ---------------------------------GDCKHTIVIRDMRLIHPEDVHDRVAYP 365
                                            GDCKHTIVIRDMRLIHPEDVHDRVAYP
Sbjct: 361 VSHVPHFRSVNMNKVRFCDLKFRLGAGYLYCHQGDCKHTIVIRDMRLIHPEDVHDRVAYP 420

[Close]

BLAST of HG10021508 vs. ExPASy Swiss-Prot
Match: Q8L627 (snRNA-activating protein complex subunit OS=Arabidopsis thaliana OX=3702 GN=SRD2 PE=1 SV=1)

HSP 1 Score: 147.5 bits (371), Expect = 2.9e-34
Identity = 117/363 (32.23%), Postives = 152/363 (41.87%), Query Frame = 0


Query: 143 EAAPASNANRSTNKMTTRKRKKEEISNIEEKS--------------------IAKVAEIV 202
           E  P+ N +   N +  R ++K  + N E K                     + KV ++ 
Sbjct: 16  ELEPSLNVSHHENPLAGRAKRKRTVKNTEVKKRTLKNTEVMKMTEKKTEEAYLVKVEQLA 75

Query: 203 KIKQKQDADRAAVKLHAFKWKKEIAS---SSSESKERLRSLRSTNSS------------- 262
           K+KQKQ+ D+AAV LH F    E      +  E  E+++SLR  +++             
Sbjct: 76  KLKQKQEEDKAAVTLHCFSKTSETGKDVVAPPEGFEQMQSLRFIDNNYTKLKPSDIQGQV 135

Query: 263 ------------------AKTQEFLALGRQTLAELKDKIYCSTDSLMEKAGQQDSSGYFL 322
                              KTQEFL LGRQ L ELKD I+C+TD +M+KAG+ D SGYFL
Sbjct: 136 DPLFPEVILCVEIYNSRKVKTQEFLVLGRQMLTELKDNIHCATDQVMQKAGKYDPSGYFL 195

Query: 323 IE---------------------------------------------------------- 365
           IE                                                          
Sbjct: 196 IEDVFHNDLRNPSAKDYSYPILDWLWNSKDEALKKWECVLTGELQKKQKLVLGEAKSVDL 255

[Close]

BLAST of HG10021508 vs. ExPASy Swiss-Prot
Match: Q9D2C9 (snRNA-activating protein complex subunit 3 OS=Mus musculus OX=10090 GN=Snapc3 PE=1 SV=2)

HSP 1 Score: 98.2 bits (243), Expect = 2.0e-19
Identity = 42/93 (45.16%), Postives = 64/93 (68.82%), Query Frame = 0


Query: 270 EGDCKHTIVIRDMRLIHPEDVHDRVAYPIVTFQLRTRARKCDVCNIYRAKKVTLDDKWAQ 329
           +GDC+H +VI D+RL+H +D  DR  YP++T +     RKC VC +Y A+ VT +D +A 
Sbjct: 310 QGDCEHVVVITDIRLVHHDDCLDRTLYPLLTKKHWLWTRKCFVCKMYTARWVTNNDTFAP 369

Query: 330 ENPCYFCEDCYFLLHYSKEGNLLYNDFVVHDYL 363
           E+PC+FC+ C+ +LHY  EGN L  +F+ + Y+
Sbjct: 370 EDPCFFCDVCFRMLHYDSEGNKL-GEFLAYPYV 401

[Close]

BLAST of HG10021508 vs. ExPASy Swiss-Prot
Match: Q5BK68 (snRNA-activating protein complex subunit 3 OS=Rattus norvegicus OX=10116 GN=Snapc3 PE=2 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 2.0e-19
Identity = 42/93 (45.16%), Postives = 64/93 (68.82%), Query Frame = 0


Query: 270 EGDCKHTIVIRDMRLIHPEDVHDRVAYPIVTFQLRTRARKCDVCNIYRAKKVTLDDKWAQ 329
           +GDC+H +VI D+RL+H +D  DR  YP++T +     RKC VC +Y A+ VT +D +A 
Sbjct: 310 QGDCEHVVVITDIRLVHHDDCLDRTLYPLLTKKHWLWTRKCFVCKMYTARWVTNNDTFAP 369

Query: 330 ENPCYFCEDCYFLLHYSKEGNLLYNDFVVHDYL 363
           E+PC+FC+ C+ +LHY  EGN L  +F+ + Y+
Sbjct: 370 EDPCFFCDVCFRMLHYDSEGNKL-GEFLAYPYV 401

[Close]

BLAST of HG10021508 vs. ExPASy Swiss-Prot
Match: Q92966 (snRNA-activating protein complex subunit 3 OS=Homo sapiens OX=9606 GN=SNAPC3 PE=1 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 5.9e-19
Identity = 42/93 (45.16%), Postives = 63/93 (67.74%), Query Frame = 0


Query: 270 EGDCKHTIVIRDMRLIHPEDVHDRVAYPIVTFQLRTRARKCDVCNIYRAKKVTLDDKWAQ 329
           +GDC+H IVI D+RL+H +D  DR  YP++  +     RKC VC +Y A+ VT +D +A 
Sbjct: 314 QGDCEHVIVITDIRLVHHDDCLDRTLYPLLIKKHWLWTRKCFVCKMYTARWVTNNDSFAP 373

Query: 330 ENPCYFCEDCYFLLHYSKEGNLLYNDFVVHDYL 363
           E+PC+FC+ C+ +LHY  EGN L  +F+ + Y+
Sbjct: 374 EDPCFFCDVCFRMLHYDSEGNKL-GEFLAYPYV 405

[Close]

BLAST of HG10021508 vs. ExPASy Swiss-Prot
Match: Q4R6Y6 (snRNA-activating protein complex subunit 3 OS=Macaca fascicularis OX=9541 GN=SNAPC3 PE=2 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 5.9e-19
Identity = 42/93 (45.16%), Postives = 63/93 (67.74%), Query Frame = 0


Query: 270 EGDCKHTIVIRDMRLIHPEDVHDRVAYPIVTFQLRTRARKCDVCNIYRAKKVTLDDKWAQ 329
           +GDC+H IVI D+RL+H +D  DR  YP++  +     RKC VC +Y A+ VT +D +A 
Sbjct: 315 QGDCEHVIVITDIRLVHHDDCLDRTLYPLLIKKHWLWTRKCFVCKMYTARWVTNNDSFAP 374

Query: 330 ENPCYFCEDCYFLLHYSKEGNLLYNDFVVHDYL 363
           E+PC+FC+ C+ +LHY  EGN L  +F+ + Y+
Sbjct: 375 EDPCFFCDVCFRMLHYDSEGNKL-GEFLAYPYV 406

[Close]

BLAST of HG10021508 vs. ExPASy TrEMBL
Match: A0A5D3E0W6 (snRNA-activating protein complex subunit-like isoform X3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold129G001090 PE=3 SV=1)

HSP 1 Score: 557.8 bits (1436), Expect = 3.4e-155
Identity = 318/524 (60.69%), Postives = 345/524 (65.84%), Query Frame = 0


Query: 1   MEARDGAGASEELALNGDGLSIPLGGPIYAPNLVGPLTRVPHFESSLIQE---------- 60
           MEARD AGAS+E+ LNGDGLSIPLGGPIYAPNLVGPLTRVPHFESS++QE          
Sbjct: 1   MEARDRAGASDEIGLNGDGLSIPLGGPIYAPNLVGPLTRVPHFESSVVQEFQSLEAELHL 60

Query: 61  -------------------------------LQSDENGNNQPELPEENLNAGVASKGRNL 120
                                          LQSDEN NNQ ELPEEN+NAG+ SK RNL
Sbjct: 61  DSSQLCDEDISIDELKLFTEEQLLNMALEESLQSDENANNQSELPEENMNAGLLSKVRNL 120

Query: 121 YLEFIFTCCDNLNIYGIVKLRCQKIVPAVLEATFLAKYFL-FIILLRKNGILRENEEEVN 180
           YLEFIF C +NLN+YGIV+ +C+KIVPAVLEATFLA+  +  +I+LRKNGILRE EEEVN
Sbjct: 121 YLEFIFACHENLNLYGIVESKCEKIVPAVLEATFLARCIVRSLIILRKNGILRECEEEVN 180

Query: 181 GHNLEAAPASNANRSTNKMTTRKRKKEEISNIEEKSIAKVAEIVKIKQKQDADRAAVKLH 240
           GHNLEA PASNANRSTNKMTTRKRKKEE+S IEEKSIAKVAEI K+KQKQ+ADRA V+LH
Sbjct: 181 GHNLEADPASNANRSTNKMTTRKRKKEELSIIEEKSIAKVAEIAKLKQKQEADRAVVQLH 240

Query: 241 AFKWKKEIASSSSESKERLRSLRSTNSSA------------------------------- 300
           AFKWKK+IASSSSESKERL+SLRSTN+SA                               
Sbjct: 241 AFKWKKDIASSSSESKERLKSLRSTNTSAKVKSLNDGKHESLHHPMTVLFVEVYHKSRKM 300

Query: 301 -KTQEFLALGRQTLAELKDKIYCSTDSLMEKAGQQDSSGYFLIE---------------- 360
            K+QEFLALGRQTLAELKDKIYCSTD+LM+KA QQDSSGYFL+E                
Sbjct: 301 VKSQEFLALGRQTLAELKDKIYCSTDTLMQKAEQQDSSGYFLVEDVFCNDLRNPSAIDYS 360

Query: 361 ------------------------------------------------------------ 365
                                                                       
Sbjct: 361 KPILDWLRNSEDEARKKWECIITGELQQKNSVVGEVSDLHVPHFRSVSMSKVRFCDLKFR 420

[Close]

BLAST of HG10021508 vs. ExPASy TrEMBL
Match: A0A5D3D338 (snRNA-activating protein complex subunit-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold130G002000 PE=3 SV=1)

HSP 1 Score: 555.8 bits (1431), Expect = 1.3e-154
Identity = 320/524 (61.07%), Postives = 345/524 (65.84%), Query Frame = 0


Query: 1   MEARDGAGASEELALNGDGLSIPLGGPIYAPNLVGPLTRVPHFESSLIQE---------- 60
           MEARD AGASEE+ LNGDGLSIPLGGPIYAPNLVGPLTRVPHFESS++QE          
Sbjct: 19  MEARDRAGASEEIGLNGDGLSIPLGGPIYAPNLVGPLTRVPHFESSVVQEFQSLEAELHL 78

Query: 61  -------------------------------LQSDENGNNQPELPEENLNAGVASKGRNL 120
                                          LQSD N NNQ ELPEEN+NAG+    RNL
Sbjct: 79  DSSQLCDEDISIDELKLFTEEQLLNMALEESLQSDGNANNQSELPEENMNAGLL---RNL 138

Query: 121 YLEFIFTCCDNLNIYGIVKLRCQKIVPAVLEATFLAKYFL-FIILLRKNGILRENEEEVN 180
           YLEFIFTC +NLN+YGIV+L+C+KIVPAVLEATFLA+Y +  +I+LRKNGILRE EEEVN
Sbjct: 139 YLEFIFTCHENLNLYGIVELKCEKIVPAVLEATFLARYIVRSLIILRKNGILRECEEEVN 198

Query: 181 GHNLEAAPASNANRSTNKMTTRKRKKEEISNIEEKSIAKVAEIVKIKQKQDADRAAVKLH 240
           GHNLEA PASNANRSTNKMTTRKRKKEE+S IEEKSIAKVAEIVK+KQKQ+ADRA V+LH
Sbjct: 199 GHNLEADPASNANRSTNKMTTRKRKKEELSIIEEKSIAKVAEIVKLKQKQEADRAVVQLH 258

Query: 241 AFKWKKEIASSSSESKERLRSLRSTNSSA------------------------------- 300
           AFKWKK+IASSSSESKERL+SLRSTNSSA                               
Sbjct: 259 AFKWKKDIASSSSESKERLKSLRSTNSSAKVKSLSGEKHESLHHPTTVLFVEVYHKSRKM 318

Query: 301 -KTQEFLALGRQTLAELKDKIYCSTDSLMEKAGQQDSSGYFLIE---------------- 360
            K+QEFLALGRQTLAELKDKIYCSTD+LM+KA  QDSSGYFL+E                
Sbjct: 319 VKSQEFLALGRQTLAELKDKIYCSTDALMQKAELQDSSGYFLVEDVFCNDLRNPSAIDYS 378

Query: 361 ------------------------------------------------------------ 365
                                                                       
Sbjct: 379 KPILDWLRNSEDEARKKWECIITGESQQKNSVVGEVSDLHVPHFRSVSMSKVRFCDLKFR 438

[Close]

BLAST of HG10021508 vs. ExPASy TrEMBL
Match: A0A1S3CAL2 (snRNA-activating protein complex subunit-like isoform X3 OS=Cucumis melo OX=3656 GN=LOC103498307 PE=3 SV=1)

HSP 1 Score: 472.2 bits (1214), Expect = 1.9e-129
Identity = 285/526 (54.18%), Postives = 304/526 (57.79%), Query Frame = 0


Query: 1   MEARDGAGASEELALNGDGLSIPLGGPIYAPNLVGPLTRVPHFESSLIQE---------- 60
           MEARD AGAS+E+ LNGDGLSIPLGGPIYAPNLVGPLTRVPHFESS++QE          
Sbjct: 1   MEARDRAGASDEIGLNGDGLSIPLGGPIYAPNLVGPLTRVPHFESSVVQEFQSLEAELHL 60

Query: 61  -------------------------------LQSDENGNNQPELPEENLNAGVASKGRNL 120
                                          LQSDEN NNQ ELPEEN+NAG+       
Sbjct: 61  DSSQLCDEDISIDELKLFTEEQLLNMALEESLQSDENANNQSELPEENMNAGLLRS---- 120

Query: 121 YLEFIFTCCDNLNIYGIVKLRCQKIVPAVLEATFLAKYFLFIILLRKNGILRENEEEVNG 180
                                                    +ILLRKNGILRE EEEVNG
Sbjct: 121 -----------------------------------------LILLRKNGILRECEEEVNG 180

Query: 181 HNLEAAPASNANRSTNKMTTRKRKKEEISNIEEKSIAKVAEIVKIKQKQDADRAAVKLHA 240
           HNLEA PASNANRSTNKMTTRKRKKEE+S IEEKSIAKVAEI K+KQKQ+ADRA V+LHA
Sbjct: 181 HNLEADPASNANRSTNKMTTRKRKKEELSIIEEKSIAKVAEIAKLKQKQEADRAVVQLHA 240

Query: 241 FKWKKEIASSSSESKERLRSLRSTNSSA-------------------------------- 300
           FKWKK+IASSSSESKERL+SLRSTN+SA                                
Sbjct: 241 FKWKKDIASSSSESKERLKSLRSTNTSAKVPHVKSLNDGKHESLHHPMTVLFVEVYHKSR 300

Query: 301 ---KTQEFLALGRQTLAELKDKIYCSTDSLMEKAGQQDSSGYFLIE-------------- 360
              K+QEFLALGRQTLAELKDKIYCSTD+LM+KA QQDSSGYFL+E              
Sbjct: 301 KMVKSQEFLALGRQTLAELKDKIYCSTDTLMQKAEQQDSSGYFLVEDVFCNDLRNPSAID 360

Query: 361 ------------------------------------------------------------ 365
                                                                       
Sbjct: 361 YSKPILDWLRNSEDEARKKWECIITGELQQKNSVVGEVSDLHVPHFRSVSMSKVRFCDLK 420

[Close]

BLAST of HG10021508 vs. ExPASy TrEMBL
Match: A0A1S3C9H5 (snRNA-activating protein complex subunit-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103498307 PE=3 SV=1)

HSP 1 Score: 472.2 bits (1214), Expect = 1.9e-129
Identity = 285/526 (54.18%), Postives = 304/526 (57.79%), Query Frame = 0


Query: 1   MEARDGAGASEELALNGDGLSIPLGGPIYAPNLVGPLTRVPHFESSLIQE---------- 60
           MEARD AGAS+E+ LNGDGLSIPLGGPIYAPNLVGPLTRVPHFESS++QE          
Sbjct: 26  MEARDRAGASDEIGLNGDGLSIPLGGPIYAPNLVGPLTRVPHFESSVVQEFQSLEAELHL 85

Query: 61  -------------------------------LQSDENGNNQPELPEENLNAGVASKGRNL 120
                                          LQSDEN NNQ ELPEEN+NAG+       
Sbjct: 86  DSSQLCDEDISIDELKLFTEEQLLNMALEESLQSDENANNQSELPEENMNAGLLRS---- 145

Query: 121 YLEFIFTCCDNLNIYGIVKLRCQKIVPAVLEATFLAKYFLFIILLRKNGILRENEEEVNG 180
                                                    +ILLRKNGILRE EEEVNG
Sbjct: 146 -----------------------------------------LILLRKNGILRECEEEVNG 205

Query: 181 HNLEAAPASNANRSTNKMTTRKRKKEEISNIEEKSIAKVAEIVKIKQKQDADRAAVKLHA 240
           HNLEA PASNANRSTNKMTTRKRKKEE+S IEEKSIAKVAEI K+KQKQ+ADRA V+LHA
Sbjct: 206 HNLEADPASNANRSTNKMTTRKRKKEELSIIEEKSIAKVAEIAKLKQKQEADRAVVQLHA 265

Query: 241 FKWKKEIASSSSESKERLRSLRSTNSSA-------------------------------- 300
           FKWKK+IASSSSESKERL+SLRSTN+SA                                
Sbjct: 266 FKWKKDIASSSSESKERLKSLRSTNTSAKVPHVKSLNDGKHESLHHPMTVLFVEVYHKSR 325

Query: 301 ---KTQEFLALGRQTLAELKDKIYCSTDSLMEKAGQQDSSGYFLIE-------------- 360
              K+QEFLALGRQTLAELKDKIYCSTD+LM+KA QQDSSGYFL+E              
Sbjct: 326 KMVKSQEFLALGRQTLAELKDKIYCSTDTLMQKAEQQDSSGYFLVEDVFCNDLRNPSAID 385

Query: 361 ------------------------------------------------------------ 365
                                                                       
Sbjct: 386 YSKPILDWLRNSEDEARKKWECIITGELQQKNSVVGEVSDLHVPHFRSVSMSKVRFCDLK 445

[Close]

BLAST of HG10021508 vs. ExPASy TrEMBL
Match: A0A1S4DZX0 (snRNA-activating protein complex subunit-like OS=Cucumis melo OX=3656 GN=LOC103494603 PE=3 SV=1)

HSP 1 Score: 453.4 bits (1165), Expect = 9.1e-124
Identity = 279/526 (53.04%), Postives = 295/526 (56.08%), Query Frame = 0


Query: 1   MEARDGAGASEELALNGDGLSIPLGGPIYAPNLVGPLTRVPHFESSLIQE---------- 60
           MEARD AGASEE+ LNGDGLSIPLGGPIYAPNLVGPLTRVPHFESS++QE          
Sbjct: 26  MEARDRAGASEEIGLNGDGLSIPLGGPIYAPNLVGPLTRVPHFESSVVQEFQSLEAELHL 85

Query: 61  -------------------------------LQSDENGNNQPELPEENLNAGVASKGRNL 120
                                          LQSD N NNQ ELPEEN+NA         
Sbjct: 86  DSSQLCDEDISIDELKLFTEEQLLNMALEESLQSDGNANNQSELPEENMNA--------- 145

Query: 121 YLEFIFTCCDNLNIYGIVKLRCQKIVPAVLEATFLAKYFLFIILLRKNGILRENEEEVNG 180
                                                           G+LRE EEEVNG
Sbjct: 146 ------------------------------------------------GLLRECEEEVNG 205

Query: 181 HNLEAAPASNANRSTNKMTTRKRKKEEISNIEEKSIAKVAEIVKIKQKQDADRAAVKLHA 240
           HNLEA PASNANRSTNKMTTRKRKKEE+S IEEKSIAKVAEIVK+KQKQ+ADRA V+LHA
Sbjct: 206 HNLEADPASNANRSTNKMTTRKRKKEELSIIEEKSIAKVAEIVKLKQKQEADRAVVQLHA 265

Query: 241 FKWKKEIASSSSESKERLRSLRSTNSSA-------------------------------- 300
           FKWKK+IASSSSESKERL+SLRSTNSSA                                
Sbjct: 266 FKWKKDIASSSSESKERLKSLRSTNSSAKVPHVKSLSGEKHESLHHPTTVLFVEVYHKSR 325

Query: 301 ---KTQEFLALGRQTLAELKDKIYCSTDSLMEKAGQQDSSGYFLIE-------------- 360
              K+QEFLALGRQTLAELKDKIYCSTD+LM+KA  QDSSGYFL+E              
Sbjct: 326 KMVKSQEFLALGRQTLAELKDKIYCSTDALMQKAELQDSSGYFLVEDVFCNDLRNPSAID 385

Query: 361 ------------------------------------------------------------ 365
                                                                       
Sbjct: 386 YSKPILDWLRNSEDEARKKWECIITGESQQKNSVVGEVSDLHVPHFRSVSMSKVRFCDLK 445

[Close]

BLAST of HG10021508 vs. TAIR 10
Match: AT1G28560.2 (snRNA activating complex family protein )

HSP 1 Score: 148.7 bits (374), Expect = 9.3e-36
Identity = 117/345 (33.91%), Postives = 148/345 (42.90%), Query Frame = 0


Query: 141 NLEAAPASNANRSTNKMTTRKRKKEEISNIEEKSIAKVAEIVKIKQKQDADRAAVKLHAF 200
           N E    +  N    KMT +K         EE  + KV ++ K+KQKQ+ D+AAV LH F
Sbjct: 53  NTEVKKRTLKNTEVMKMTEKK--------TEEAYLVKVEQLAKLKQKQEEDKAAVTLHCF 112

Query: 201 KWKKEIAS---SSSESKERLRSLRSTNSS------------------------------- 260
               E      +  E  E+++SLR  +++                               
Sbjct: 113 SKTSETGKDVVAPPEGFEQMQSLRFIDNNYTKLKPSDIQGQVDPLFPEVILCVEIYNSRK 172

Query: 261 AKTQEFLALGRQTLAELKDKIYCSTDSLMEKAGQQDSSGYFLIE---------------- 320
            KTQEFL LGRQ L ELKD I+C+TD +M+KAG+ D SGYFLIE                
Sbjct: 173 VKTQEFLVLGRQMLTELKDNIHCATDQVMQKAGKYDPSGYFLIEDVFHNDLRNPSAKDYS 232

Query: 321 ------------------------------------------------------------ 365
                                                                       
Sbjct: 233 YPILDWLWNSKDEALKKWECVLTGELQKKQKLVLGEAKSVDLPRYRTADMQSTHFCDIRF 292

[Close]

BLAST of HG10021508 vs. TAIR 10
Match: AT1G28560.1 (snRNA activating complex family protein )

HSP 1 Score: 147.5 bits (371), Expect = 2.1e-35
Identity = 117/363 (32.23%), Postives = 152/363 (41.87%), Query Frame = 0


Query: 143 EAAPASNANRSTNKMTTRKRKKEEISNIEEKS--------------------IAKVAEIV 202
           E  P+ N +   N +  R ++K  + N E K                     + KV ++ 
Sbjct: 16  ELEPSLNVSHHENPLAGRAKRKRTVKNTEVKKRTLKNTEVMKMTEKKTEEAYLVKVEQLA 75

Query: 203 KIKQKQDADRAAVKLHAFKWKKEIAS---SSSESKERLRSLRSTNSS------------- 262
           K+KQKQ+ D+AAV LH F    E      +  E  E+++SLR  +++             
Sbjct: 76  KLKQKQEEDKAAVTLHCFSKTSETGKDVVAPPEGFEQMQSLRFIDNNYTKLKPSDIQGQV 135

Query: 263 ------------------AKTQEFLALGRQTLAELKDKIYCSTDSLMEKAGQQDSSGYFL 322
                              KTQEFL LGRQ L ELKD I+C+TD +M+KAG+ D SGYFL
Sbjct: 136 DPLFPEVILCVEIYNSRKVKTQEFLVLGRQMLTELKDNIHCATDQVMQKAGKYDPSGYFL 195

Query: 323 IE---------------------------------------------------------- 365
           IE                                                          
Sbjct: 196 IEDVFHNDLRNPSAKDYSYPILDWLWNSKDEALKKWECVLTGELQKKQKLVLGEAKSVDL 255

The following BLAST results are available for this feature:

BLAST of HG10021508 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK29378.1	7.1e-155	60.69	snRNA-activating protein complex subunit-like isoform X3 [Cucumis melo var. maku...	[more]
TYK17049.1	2.7e-154	61.07	snRNA-activating protein complex subunit-like isoform X1 [Cucumis melo var. maku...	[more]
XP_008459095.1	3.9e-129	54.18	PREDICTED: snRNA-activating protein complex subunit-like isoform X3 [Cucumis mel...	[more]
XP_008459093.1	3.9e-129	54.18	PREDICTED: snRNA-activating protein complex subunit-like isoform X1 [Cucumis mel...	[more]
XP_038894485.1	2.4e-126	57.29	snRNA-activating protein complex subunit isoform X4 [Benincasa hispida]	[more]

BLAST of HG10021508 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8L627	2.9e-34	32.23	snRNA-activating protein complex subunit OS=Arabidopsis thaliana OX=3702 GN=SRD2...	[more]
Q9D2C9	2.0e-19	45.16	snRNA-activating protein complex subunit 3 OS=Mus musculus OX=10090 GN=Snapc3 PE...	[more]
Q5BK68	2.0e-19	45.16	snRNA-activating protein complex subunit 3 OS=Rattus norvegicus OX=10116 GN=Snap...	[more]
Q92966	5.9e-19	45.16	snRNA-activating protein complex subunit 3 OS=Homo sapiens OX=9606 GN=SNAPC3 PE=...	[more]
Q4R6Y6	5.9e-19	45.16	snRNA-activating protein complex subunit 3 OS=Macaca fascicularis OX=9541 GN=SNA...	[more]

BLAST of HG10021508 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3E0W6	3.4e-155	60.69	snRNA-activating protein complex subunit-like isoform X3 OS=Cucumis melo var. ma...	[more]
A0A5D3D338	1.3e-154	61.07	snRNA-activating protein complex subunit-like isoform X1 OS=Cucumis melo var. ma...	[more]
A0A1S3CAL2	1.9e-129	54.18	snRNA-activating protein complex subunit-like isoform X3 OS=Cucumis melo OX=3656...	[more]
A0A1S3C9H5	1.9e-129	54.18	snRNA-activating protein complex subunit-like isoform X1 OS=Cucumis melo OX=3656...	[more]
A0A1S4DZX0	9.1e-124	53.04	snRNA-activating protein complex subunit-like OS=Cucumis melo OX=3656 GN=LOC1034...	[more]

BLAST of HG10021508 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G28560.2	9.3e-36	33.91	snRNA activating complex family protein	[more]
AT1G28560.1	2.1e-35	32.23	snRNA activating complex family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR022042	snRNA-activating protein complex, subunit 3	PFAM	PF12251	zf-SNAP50_C	coord: 270..361 e-value: 2.5E-33 score: 115.4
IPR022042	snRNA-activating protein complex, subunit 3	PANTHER	PTHR13421	SNRNA-ACTIVATING PROTEIN COMPLEX SUBUNIT 3	coord: 271..361
IPR022042	snRNA-activating protein complex, subunit 3	PANTHER	PTHR13421	SNRNA-ACTIVATING PROTEIN COMPLEX SUBUNIT 3	coord: 10..271
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 146..166
None	No IPR available	PANTHER	PTHR13421:SF16	SNRNA-ACTIVATING PROTEIN COMPLEX SUBUNIT 3	coord: 10..271
None	No IPR available	PANTHER	PTHR13421:SF16	SNRNA-ACTIVATING PROTEIN COMPLEX SUBUNIT 3	coord: 271..361

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10021508.1	HG10021508.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0000976	transcription cis-regulatory region binding