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HG10021507 (gene) Bottle gourd (Hangzhou Gourd) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCAAATCGCGATGTGGGTCTCTTTGATTTTCGTTTTCCGGAATTGGGTTTTGATTATCGTTCTTCTTTTCATCGTCAATTCGATTTGGGTCTTGCTTGGCTTAATCCCTGTTAGTTACGCTTTGTGGGTGAATTCTGATCTGGGGTTTAGTTTTGTTCGCGAAGAACTCAAATGCTCTCTGGTTTGATTCTATCAAAATTCTGTTGATTGCGAGCGCGTTTCTCTATCTGCAGTATTTCTTGTTGGTTGTATTTAAGAAATCCCTGTTTGCATTCTCTATATATCAGTACCTTCTGATGATTGTTGGGATGATCCCTTTGCAATTTATAATTCGGCTGCGATCTCAGTTAATTCTCTGCATTTTATATAGCAGAAAATTTAGTAGCATCCCTTTTTGTTTCTCGAGGTGTTTTTTTAAACATTTTCTTTCCTTCTTTGTGCAAGTAATTCATAAAATTTTTTATACTAAAACTAGCAAGCTTATGGTAACTTGATTATGTTAGTCATCTTATATGAGTTTTATTACTGTTCCTGCATGTTTATAGTGCTATGGAGCCATTGTACTCTGCTGACAAGTGACCTTTTTTTTCCTGAACAACTTGGTTGTAGTTTATTAACTTCATATTATGCTTGGCATTGCTTTTATCATCCAATTGTCCAATTTCACTGGCAATCATACTCGGAATTTTATTTGTTGAAAAAGGAAATGGTTGGATGGACTATGTTTAGCTACAATTATCTTGCAATAACACATATTAAATCCAGTTTATTGTACCTTTGTTTTGTGCTCAGGTGCTTCTTGGTGATGTTGGTGCTGGGAAGTCAAGTCTAGTGTTGCGTTTTGTTAAAGGACAATTTGTAGAGTTTCAGGTTTGTTATAAAAATCATTTGGTTTTGGCTATTGAAATTTCTGAAAGGGCTTTCTGTCTTGAACATATATATTCTTTTTGATTGTTCGATTGTGTAGGAATCAACAATTGGTGCTGCCTTTTTCTCTCAAACATTGGCTGTAAATGATGCCACTGTGAAATTTGAACTGGGATACAGCTGGGCAGGAGAGATACCACAGTTTGGCTCCAATGTATTACAGGGGTGCAGCTGCAGCTATTATCGTCTTTGATATTACTAACCAAGTAAGTGGCATTTGAAAACTCTTGTTGGGTTACATATAGTCTAGGAACAAATTAATTGTTATTGTGCTTGGGCGTTACATCTTCCAAATTCATGGCACGCGCGATCAGCCATTTTCATGAAATATGTCTGGATAAAAAAAGTATTATATGTGTATGAATTAAGTACAACCATATTTTTTAAAAAAAATTATTGCTAAAAGAGCTTAGAAATTTGCCAACACGTATTCGACTTTAGATAAGGAAACTGCAACAGAATTGATGTTTTGAACTTTTAAGCAAGTGGGGGATTTGTAAATCATCTCATGGTGGTGCTTGACTTTAAATGGGATGTTGTGAGTGTGTTTGTGCGCTTATACACATCTGTGTATTAGGGTGGGGACTTAGGAGTAATGACTTTTATGAGTTCTTACCCTTCTGAAAAAGGACATGCTCTAAAGTCTAAACATATCAGTTTTCACTGGGGATTGAGTATTTTTTAATATACTACTGTAATTGAATTGGAATGTTATTTTTTTTCATGCTTCAACTCTTTTCGGTATCCTCTATTTGATTGCAGGGTTCATTTGATCGGGCAAAAAATGGTTCAAGAACTTCAGGCACAAGGTAGTCTCACTGTTGGATTTAACATTATGTGAACTTTTAATAAGTGAAATTAGTGTGGCACTGCCCTATCTGAATTTGTTTTACCAATTGGATCATCTCCTTGCATCAGGCAATCCGAATATGGTCATGGCTTTAGCTGGGAATAAATCAGATTTGTTGGATTCTAGGAAGGTTGCTGCAGAGGCAAGTACCCCAACCCCGGTTTTCTTTCTTTTCTGTTACTTTGTTGAACTGGGATGCATTTCTTACAAATAAAATGGTTCAACTGTTGCTCCTACAGGATGCCCAAACATATGCGCAGGAGAATGGCCTTTTCTTCATGGAAACCTCTGCAAAAAGTGCTGCTAATGTCAATGATATCTTCTATGAATAGGTAAGTAACTAGGACCTATGAGTCCACCCCTCACCCCCCCCCCCCCCCCCCCCCCCACTAAGGGGAAAAAAAGAGGAAAAAGAGCTGAACAAGGTCACTCTTTTATGCTTGGGATATCACCGGATTGTAAGTTTTAAGAAAGGAGTAGTATTATGGTGCGTAACAAAGAAGAATGGAGTTTATGGAGCCCGAGTGTTTTAAACTAAGAAGCACGACACTGACACGAATACGACATGACACCGACACGGCGACAGTCAATTTACAAAACAAAAAAGTAGGACACGACACATTGGGGACACATTATTATTTATTATTTTTTTTACAAAAAATAAATATATGGTGTATAATTTGACATATAGTGAAATATGCGCTCATATATTTAACAAAAAGTAAGAAAAAACAGACACGGAAAAAAAGGAAAGATAAAAACGGAAGGAGAAAAAAAAAGATATGAGAAAAGAAAAAAAAAACAGTAAAAGAAGTCACATAAGTTGTCAACGGTCGTGGGTCTTGAAGTTGAAGTCACTGCCGTTAATGAAGTTAGAAAGAAGAATCAGGTAGCATAGTGAGTTTTTTATATTTTTTAAAAAGGTGTGGGTTAAGTCTTGGTAAGGTGTGTTAGTATGGAGAACGTGTGTAAAAACTCTAGGATTTTGAAAAAGTTAGGCTGAACAATTAATTTTAATCGGCTTAAATGCTCCTTAAATGGCTGCGCACAGTGGGTCTTGTTTCATTACTTTAATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAATATGGAGTGTTCTTGGTGTGCCGCTGGCATGTCTTGGCATGTCCTAACGTGTTGGAAAGCAAATAATAATAATAAAATAATGGATATGCCAGTTGGCGTGTCGGGAACGTGTCAGAGGGTGTTAGTGTCCGACACGGGTCCAACACCGACACTTCACCAATTTAGAAGCGGACGGGGCAAAAAAATGAGTTATGGAAACCTTGGTTCTGTGTCACATTTGTTTGGTCAATAGGATTATGATTTATAAATGCAATATAAGATGTGAGTTTCATGAGTTTGGGTTCATTAAGTCGTGATAGCAAACCTATAGTTTGGGACAAGTAAATTACATGTAAGTTCTTATCTTGAGTTTACACAAAGTTATAGAAGTTCCCGCCCTGCACCCACTTCCACACACACGCACACACAAAAAGGGTAAAAAAAGGAAAAAAAAAAGAAGAAAAACTAGTGATTTTGATTCCTTGTTTTTTCTATGCAGCAAAGAGATTACCCGAGTGCAACCAGTACAGAATACACCGGGATGGTTCTGGAGACCTGCTGAAAGGGTTGCGAGCACGTCTTGTTGCTCGTAGAACTTCATCATTGTTCAGTTCTAAGGAGTCAGCAGCATGTCTTTCATTGTATGCAGAATTCTAA ATGTCAAATCGCGATGTGGGTCTCTTTGATTTTCGTTTTCCGGAATTGGGTTTTGATTATCGTTCTTCTTTTCATCGTCAATTCGATTTGGGTCTTGCTTGGCTTAATCCCTGCAATCCGAATATGGTCATGGCTTTAGCTGGGAATAAATCAGATTTGTTGGATTCTAGGAAGGTTGCTGCAGAGGCAACAAAGAGATTACCCGAGTGCAACCAGTACAGAATACACCGGGATGGTTCTGGAGACCTGCTGAAAGGGTTGCGAGCACGTCTTGTTGCTCGTAGAACTTCATCATTGTTCAGTTCTAAGGAGTCAGCAGCATGTCTTTCATTGTATGCAGAATTCTAA ATGTCAAATCGCGATGTGGGTCTCTTTGATTTTCGTTTTCCGGAATTGGGTTTTGATTATCGTTCTTCTTTTCATCGTCAATTCGATTTGGGTCTTGCTTGGCTTAATCCCTGCAATCCGAATATGGTCATGGCTTTAGCTGGGAATAAATCAGATTTGTTGGATTCTAGGAAGGTTGCTGCAGAGGCAACAAAGAGATTACCCGAGTGCAACCAGTACAGAATACACCGGGATGGTTCTGGAGACCTGCTGAAAGGGTTGCGAGCACGTCTTGTTGCTCGTAGAACTTCATCATTGTTCAGTTCTAAGGAGTCAGCAGCATGTCTTTCATTGTATGCAGAATTCTAA MSNRDVGLFDFRFPELGFDYRSSFHRQFDLGLAWLNPCNPNMVMALAGNKSDLLDSRKVAAEATKRLPECNQYRIHRDGSGDLLKGLRARLVARRTSSLFSSKESAACLSLYAEF Homology
BLAST of HG10021507 vs. NCBI nr
Match: KAA0043312.1 (ras-related protein RABF2b [Cucumis melo var. makuwa]) HSP 1 Score: 57.8 bits (138), Expect = 7.3e-05 Identity = 30/50 (60.00%), Postives = 33/50 (66.00%), Query Frame = 0
BLAST of HG10021507 vs. NCBI nr
Match: KAG7012595.1 (Ras-related protein RABF2b [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 56.6 bits (135), Expect = 1.6e-04 Identity = 29/50 (58.00%), Postives = 33/50 (66.00%), Query Frame = 0
BLAST of HG10021507 vs. ExPASy Swiss-Prot
Match: Q9SN68 (Ras-related protein RABF2b OS=Arabidopsis thaliana OX=3702 GN=RABF2B PE=1 SV=1) HSP 1 Score: 47.0 bits (110), Expect = 1.7e-04 Identity = 22/24 (91.67%), Postives = 23/24 (95.83%), Query Frame = 0
BLAST of HG10021507 vs. ExPASy Swiss-Prot
Match: P31582 (Ras-related protein RABF2a OS=Arabidopsis thaliana OX=3702 GN=RABF2A PE=1 SV=1) HSP 1 Score: 46.2 bits (108), Expect = 2.9e-04 Identity = 21/24 (87.50%), Postives = 24/24 (100.00%), Query Frame = 0
BLAST of HG10021507 vs. ExPASy Swiss-Prot
Match: P29687 (Ras-related protein Rab5 OS=Nicotiana tabacum OX=4097 GN=RAB5 PE=2 SV=1) HSP 1 Score: 44.7 bits (104), Expect = 8.4e-04 Identity = 22/33 (66.67%), Postives = 24/33 (72.73%), Query Frame = 0
BLAST of HG10021507 vs. ExPASy TrEMBL
Match: A0A0A0LYD7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G705090 PE=4 SV=1) HSP 1 Score: 67.0 bits (162), Expect = 5.8e-08 Identity = 49/96 (51.04%), Postives = 52/96 (54.17%), Query Frame = 0
BLAST of HG10021507 vs. ExPASy TrEMBL
Match: A0A5A7TJ32 (Ras-related protein RABF2b OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold110G002220 PE=4 SV=1) HSP 1 Score: 57.8 bits (138), Expect = 3.5e-05 Identity = 30/50 (60.00%), Postives = 33/50 (66.00%), Query Frame = 0
BLAST of HG10021507 vs. TAIR 10
Match: AT4G19640.1 (Ras-related small GTP-binding family protein ) HSP 1 Score: 47.0 bits (110), Expect = 1.2e-05 Identity = 22/24 (91.67%), Postives = 23/24 (95.83%), Query Frame = 0
BLAST of HG10021507 vs. TAIR 10
Match: AT5G45130.1 (RAB homolog 1 ) HSP 1 Score: 46.2 bits (108), Expect = 2.0e-05 Identity = 21/24 (87.50%), Postives = 24/24 (100.00%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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