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HG10021498 (gene) Bottle gourd (Hangzhou Gourd) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATAAATTTTATTCCACTAAAGGTCTATGCCTTTTGGTGATTGTGATGGTGGTGGTTGTCAATGAAACTCAACTGGCAGAGACAGTGAAATGCGATCCAAAGGAGTTAAGGCCATGTCTTTTGGCCTTCACAATGTCAGTGGAGCCGTCATCAGCTTGTTGCAGCAAGGTGAAGGAGCACAGACCATGCTATTGTGGATACAAGAAAAATCCAAAAATTCAACCCTATTTACAATATGATGCCACAAAAAATATAATTTCTAGTTGTGGCGTTGCCATCCCTTCTTGCTAA ATGGATAAATTTTATTCCACTAAAGGTCTATGCCTTTTGGTGATTGTGATGGTGGTGGTTGTCAATGAAACTCAACTGGCAGAGACAGTGAAATGCGATCCAAAGGAGTTAAGGCCATGTCTTTTGGCCTTCACAATGTCAGTGGAGCCGTCATCAGCTTGTTGCAGCAAGGTGAAGGAGCACAGACCATGCTATTGTGGATACAAGAAAAATCCAAAAATTCAACCCTATTTACAATATGATGCCACAAAAAATATAATTTCTAGTTGTGGCGTTGCCATCCCTTCTTGCTAA ATGGATAAATTTTATTCCACTAAAGGTCTATGCCTTTTGGTGATTGTGATGGTGGTGGTTGTCAATGAAACTCAACTGGCAGAGACAGTGAAATGCGATCCAAAGGAGTTAAGGCCATGTCTTTTGGCCTTCACAATGTCAGTGGAGCCGTCATCAGCTTGTTGCAGCAAGGTGAAGGAGCACAGACCATGCTATTGTGGATACAAGAAAAATCCAAAAATTCAACCCTATTTACAATATGATGCCACAAAAAATATAATTTCTAGTTGTGGCGTTGCCATCCCTTCTTGCTAA MDKFYSTKGLCLLVIVMVVVVNETQLAETVKCDPKELRPCLLAFTMSVEPSSACCSKVKEHRPCYCGYKKNPKIQPYLQYDATKNIISSCGVAIPSC Homology
BLAST of HG10021498 vs. NCBI nr
Match: KGN66906.1 (hypothetical protein Csa_006987 [Cucumis sativus]) HSP 1 Score: 136.0 bits (341), Expect = 1.8e-28 Identity = 59/82 (71.95%), Postives = 71/82 (86.59%), Query Frame = 0
BLAST of HG10021498 vs. NCBI nr
Match: KAE8648143.1 (hypothetical protein Csa_023893, partial [Cucumis sativus]) HSP 1 Score: 105.1 bits (261), Expect = 3.4e-19 Identity = 44/83 (53.01%), Postives = 56/83 (67.47%), Query Frame = 0
BLAST of HG10021498 vs. NCBI nr
Match: XP_022759945.1 (non-specific lipid-transfer protein 2-like [Durio zibethinus]) HSP 1 Score: 102.8 bits (255), Expect = 1.7e-18 Identity = 44/95 (46.32%), Postives = 61/95 (64.21%), Query Frame = 0
BLAST of HG10021498 vs. NCBI nr
Match: XP_038904866.1 (non-specific lipid-transfer protein 2-like [Benincasa hispida]) HSP 1 Score: 102.4 bits (254), Expect = 2.2e-18 Identity = 46/95 (48.42%), Postives = 62/95 (65.26%), Query Frame = 0
BLAST of HG10021498 vs. NCBI nr
Match: XP_016713563.1 (non-specific lipid-transfer protein 2 [Gossypium hirsutum] >AGC08429.1 lipid transfer protein [Gossypium hirsutum] >AXQ39543.1 lipid transfer protein [Gossypium hirsutum] >KAG4168930.1 hypothetical protein ERO13_A12G054800v2 [Gossypium hirsutum]) HSP 1 Score: 102.4 bits (254), Expect = 2.2e-18 Identity = 45/95 (47.37%), Postives = 62/95 (65.26%), Query Frame = 0
BLAST of HG10021498 vs. ExPASy Swiss-Prot
Match: Q43681 (Probable non-specific lipid-transfer protein AKCS9 OS=Vigna unguiculata OX=3917 PE=2 SV=1) HSP 1 Score: 86.3 bits (212), Expect = 2.1e-16 Identity = 36/88 (40.91%), Postives = 55/88 (62.50%), Query Frame = 0
BLAST of HG10021498 vs. ExPASy Swiss-Prot
Match: P86809 (Non-specific lipid-transfer protein 2 OS=Apium graveolens var. rapaceum OX=278110 PE=1 SV=1) HSP 1 Score: 73.9 bits (180), Expect = 1.1e-12 Identity = 29/63 (46.03%), Postives = 41/63 (65.08%), Query Frame = 0
BLAST of HG10021498 vs. ExPASy Swiss-Prot
Match: P82353 (Non-specific lipid-transfer protein 2 OS=Prunus armeniaca OX=36596 PE=1 SV=1) HSP 1 Score: 71.2 bits (173), Expect = 7.1e-12 Identity = 27/68 (39.71%), Postives = 38/68 (55.88%), Query Frame = 0
BLAST of HG10021498 vs. ExPASy Swiss-Prot
Match: P82900 (Non-specific lipid-transfer protein 2G OS=Triticum aestivum OX=4565 PE=1 SV=2) HSP 1 Score: 55.5 bits (132), Expect = 4.0e-07 Identity = 23/90 (25.56%), Postives = 44/90 (48.89%), Query Frame = 0
BLAST of HG10021498 vs. ExPASy TrEMBL
Match: A0A0A0M3W7 (AAI domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G711160 PE=4 SV=1) HSP 1 Score: 136.0 bits (341), Expect = 8.6e-29 Identity = 59/82 (71.95%), Postives = 71/82 (86.59%), Query Frame = 0
BLAST of HG10021498 vs. ExPASy TrEMBL
Match: A0A6P6A5B6 (non-specific lipid-transfer protein 2-like OS=Durio zibethinus OX=66656 GN=LOC111306313 PE=4 SV=1) HSP 1 Score: 102.8 bits (255), Expect = 8.1e-19 Identity = 44/95 (46.32%), Postives = 61/95 (64.21%), Query Frame = 0
BLAST of HG10021498 vs. ExPASy TrEMBL
Match: S4TID2 (Lipid transfer protein OS=Gossypium hirsutum OX=3635 GN=LTP9 PE=2 SV=1) HSP 1 Score: 102.4 bits (254), Expect = 1.1e-18 Identity = 45/95 (47.37%), Postives = 62/95 (65.26%), Query Frame = 0
BLAST of HG10021498 vs. ExPASy TrEMBL
Match: A0A5D2WQI4 (AAI domain-containing protein OS=Gossypium mustelinum OX=34275 GN=E1A91_A12G058300v1 PE=4 SV=1) HSP 1 Score: 102.4 bits (254), Expect = 1.1e-18 Identity = 45/95 (47.37%), Postives = 62/95 (65.26%), Query Frame = 0
BLAST of HG10021498 vs. ExPASy TrEMBL
Match: A0A6P6A579 (non-specific lipid-transfer protein 2-like OS=Durio zibethinus OX=66656 GN=LOC111306314 PE=4 SV=1) HSP 1 Score: 101.3 bits (251), Expect = 2.4e-18 Identity = 43/95 (45.26%), Postives = 60/95 (63.16%), Query Frame = 0
BLAST of HG10021498 vs. TAIR 10
Match: AT3G18280.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 78.2 bits (191), Expect = 4.1e-15 Identity = 34/91 (37.36%), Postives = 51/91 (56.04%), Query Frame = 0
BLAST of HG10021498 vs. TAIR 10
Match: AT1G48750.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 76.3 bits (186), Expect = 1.6e-14 Identity = 31/86 (36.05%), Postives = 50/86 (58.14%), Query Frame = 0
BLAST of HG10021498 vs. TAIR 10
Match: AT1G66850.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 72.8 bits (177), Expect = 1.7e-13 Identity = 28/68 (41.18%), Postives = 42/68 (61.76%), Query Frame = 0
BLAST of HG10021498 vs. TAIR 10
Match: AT1G73780.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 71.2 bits (173), Expect = 5.0e-13 Identity = 31/84 (36.90%), Postives = 45/84 (53.57%), Query Frame = 0
BLAST of HG10021498 vs. TAIR 10
Match: AT5G38195.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 65.1 bits (157), Expect = 3.6e-11 Identity = 31/94 (32.98%), Postives = 48/94 (51.06%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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