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HG10021483 (gene) Bottle gourd (Hangzhou Gourd) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTATCGAAAAACGTACGTACTCCTCCGTTTGGGCCAAGTAGAAGAACTTCAGACAATCTACCTCCCCCAACGTATGTCCCTTCCATCATTTTACATAGGGAGTCTAGGATCAATTTTGGAATATTACCAAAAGGTGTACGCATTCCTCTGTTTGGGCCGAGTGACAGAACCTCAAATTATCCACCACCTCCACTGCATGCTCCTTCTGTTATTTGA ATGTTATCGAAAAACGTACGTACTCCTCCGTTTGGGCCAAGTAGAAGAACTTCAGACAATCTACCTCCCCCAACGTATGTCCCTTCCATCATTTTACATAGGGAGTCTAGGATCAATTTTGGAATATTACCAAAAGGTGTACGCATTCCTCTGTTTGGGCCGAGTGACAGAACCTCAAATTATCCACCACCTCCACTGCATGCTCCTTCTGTTATTTGA ATGTTATCGAAAAACGTACGTACTCCTCCGTTTGGGCCAAGTAGAAGAACTTCAGACAATCTACCTCCCCCAACGTATGTCCCTTCCATCATTTTACATAGGGAGTCTAGGATCAATTTTGGAATATTACCAAAAGGTGTACGCATTCCTCTGTTTGGGCCGAGTGACAGAACCTCAAATTATCCACCACCTCCACTGCATGCTCCTTCTGTTATTTGA MLSKNVRTPPFGPSRRTSDNLPPPTYVPSIILHRESRINFGILPKGVRIPLFGPSDRTSNYPPPPLHAPSVI Homology
BLAST of HG10021483 vs. NCBI nr
Match: KAG6603169.1 (hypothetical protein SDJN03_03778, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 97.1 bits (240), Expect = 6.8e-17 Identity = 49/73 (67.12%), Postives = 56/73 (76.71%), Query Frame = 0
BLAST of HG10021483 vs. NCBI nr
Match: XP_038882352.1 (uncharacterized protein LOC120073615 [Benincasa hispida]) HSP 1 Score: 94.7 bits (234), Expect = 3.4e-16 Identity = 45/72 (62.50%), Postives = 54/72 (75.00%), Query Frame = 0
BLAST of HG10021483 vs. NCBI nr
Match: XP_022967687.1 (actin cytoskeleton-regulatory complex protein PAN1-like [Cucurbita maxima]) HSP 1 Score: 93.6 bits (231), Expect = 7.5e-16 Identity = 45/72 (62.50%), Postives = 54/72 (75.00%), Query Frame = 0
BLAST of HG10021483 vs. NCBI nr
Match: KAA0040932.1 (proline-rich protein HaeIII subfamily 1-like [Cucumis melo var. makuwa] >TYK10605.1 proline-rich protein HaeIII subfamily 1-like [Cucumis melo var. makuwa]) HSP 1 Score: 83.2 bits (204), Expect = 1.0e-12 Identity = 44/66 (66.67%), Postives = 52/66 (78.79%), Query Frame = 0
BLAST of HG10021483 vs. NCBI nr
Match: XP_031744003.1 (abl interactor homolog [Cucumis sativus]) HSP 1 Score: 79.0 bits (193), Expect = 1.9e-11 Identity = 41/72 (56.94%), Postives = 53/72 (73.61%), Query Frame = 0
BLAST of HG10021483 vs. ExPASy TrEMBL
Match: A0A6J1HRH7 (actin cytoskeleton-regulatory complex protein PAN1-like OS=Cucurbita maxima OX=3661 GN=LOC111467141 PE=4 SV=1) HSP 1 Score: 93.6 bits (231), Expect = 3.6e-16 Identity = 45/72 (62.50%), Postives = 54/72 (75.00%), Query Frame = 0
BLAST of HG10021483 vs. ExPASy TrEMBL
Match: A0A5D3CGG1 (Proline-rich protein HaeIII subfamily 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold315G00020 PE=4 SV=1) HSP 1 Score: 83.2 bits (204), Expect = 4.9e-13 Identity = 44/66 (66.67%), Postives = 52/66 (78.79%), Query Frame = 0
BLAST of HG10021483 vs. ExPASy TrEMBL
Match: A0A5A7T8R0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold36G001740 PE=4 SV=1) HSP 1 Score: 78.2 bits (191), Expect = 1.6e-11 Identity = 37/58 (63.79%), Postives = 45/58 (77.59%), Query Frame = 0
BLAST of HG10021483 vs. ExPASy TrEMBL
Match: A0A5D3BP86 (Proline-rich protein HaeIII subfamily 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold109G00050 PE=4 SV=1) HSP 1 Score: 75.5 bits (184), Expect = 1.0e-10 Identity = 41/65 (63.08%), Postives = 50/65 (76.92%), Query Frame = 0
BLAST of HG10021483 vs. ExPASy TrEMBL
Match: A0A5D3BVE5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2454G00110 PE=4 SV=1) HSP 1 Score: 74.7 bits (182), Expect = 1.7e-10 Identity = 37/58 (63.79%), Postives = 44/58 (75.86%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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