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HG10021420 (gene) Bottle gourd (Hangzhou Gourd) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCCATTCCCTCATTCGCCGCCGTCTTCTTCTCCCTCACCCTCATTCTCCTCGCCGGAATCTCAAATGCCAGAGACCTACGTCCATCGGAGCACGGCTTGGAGTACCAAAACCCCGGCGCTATGGAAAATTCCTCTCCGCAGATGCAATCCTTCTTCAAAGGAAACTCCTGGTCCTCCTCCGACGTCGCTCTTCCCAAGGCGATGAACACTAGCCTCCCGCCGCAGTGGTGGACTCGTAGCCACCGTAATCGCTCTGGAGCCGCTGCCGATGGAGGCAGCGGAGATCACATTCGTGGCGCATTGCTTGTGGCGAGTTTGGTATGTGGAATTATAGGCGTTTCTTTGCTGATTGCTTCTGCTTTTATTTACTTCTTTAAGTTCAGGAAGCAGAGTAAATCGTCGTCCTCGCTCTCTGTCTCTGAAACTACTAACATTATAGCTAACAAGTGA ATGGCCATTCCCTCATTCGCCGCCGTCTTCTTCTCCCTCACCCTCATTCTCCTCGCCGGAATCTCAAATGCCAGAGACCTACGTCCATCGGAGCACGGCTTGGAGTACCAAAACCCCGGCGCTATGGAAAATTCCTCTCCGCAGATGCAATCCTTCTTCAAAGGAAACTCCTGGTCCTCCTCCGACGTCGCTCTTCCCAAGGCGATGAACACTAGCCTCCCGCCGCAGTGGTGGACTCGTAGCCACCGTAATCGCTCTGGAGCCGCTGCCGATGGAGGCAGCGGAGATCACATTCGTGGCGCATTGCTTGTGGCGAGTTTGGTATGTGGAATTATAGGCGTTTCTTTGCTGATTGCTTCTGCTTTTATTTACTTCTTTAAGTTCAGGAAGCAGAGTAAATCGTCGTCCTCGCTCTCTGTCTCTGAAACTACTAACATTATAGCTAACAAGTGA ATGGCCATTCCCTCATTCGCCGCCGTCTTCTTCTCCCTCACCCTCATTCTCCTCGCCGGAATCTCAAATGCCAGAGACCTACGTCCATCGGAGCACGGCTTGGAGTACCAAAACCCCGGCGCTATGGAAAATTCCTCTCCGCAGATGCAATCCTTCTTCAAAGGAAACTCCTGGTCCTCCTCCGACGTCGCTCTTCCCAAGGCGATGAACACTAGCCTCCCGCCGCAGTGGTGGACTCGTAGCCACCGTAATCGCTCTGGAGCCGCTGCCGATGGAGGCAGCGGAGATCACATTCGTGGCGCATTGCTTGTGGCGAGTTTGGTATGTGGAATTATAGGCGTTTCTTTGCTGATTGCTTCTGCTTTTATTTACTTCTTTAAGTTCAGGAAGCAGAGTAAATCGTCGTCCTCGCTCTCTGTCTCTGAAACTACTAACATTATAGCTAACAAGTGA MAIPSFAAVFFSLTLILLAGISNARDLRPSEHGLEYQNPGAMENSSPQMQSFFKGNSWSSSDVALPKAMNTSLPPQWWTRSHRNRSGAAADGGSGDHIRGALLVASLVCGIIGVSLLIASAFIYFFKFRKQSKSSSSLSVSETTNIIANK Homology
BLAST of HG10021420 vs. NCBI nr
Match: XP_038895122.1 (uncharacterized protein LOC120083432 [Benincasa hispida]) HSP 1 Score: 270.8 bits (691), Expect = 7.2e-69 Identity = 140/148 (94.59%), Postives = 143/148 (96.62%), Query Frame = 0
BLAST of HG10021420 vs. NCBI nr
Match: XP_023000949.1 (uncharacterized protein LOC111495232 [Cucurbita maxima]) HSP 1 Score: 248.4 bits (633), Expect = 3.8e-62 Identity = 129/148 (87.16%), Postives = 138/148 (93.24%), Query Frame = 0
BLAST of HG10021420 vs. NCBI nr
Match: KAG6583852.1 (hypothetical protein SDJN03_19784, partial [Cucurbita argyrosperma subsp. sororia] >KAG7019473.1 hypothetical protein SDJN02_18434, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 246.5 bits (628), Expect = 1.4e-61 Identity = 128/148 (86.49%), Postives = 137/148 (92.57%), Query Frame = 0
BLAST of HG10021420 vs. NCBI nr
Match: XP_022927447.1 (uncharacterized protein LOC111434271 [Cucurbita moschata]) HSP 1 Score: 246.1 bits (627), Expect = 1.9e-61 Identity = 127/148 (85.81%), Postives = 137/148 (92.57%), Query Frame = 0
BLAST of HG10021420 vs. NCBI nr
Match: XP_023519911.1 (uncharacterized protein LOC111783236 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 245.7 bits (626), Expect = 2.5e-61 Identity = 127/148 (85.81%), Postives = 136/148 (91.89%), Query Frame = 0
BLAST of HG10021420 vs. ExPASy TrEMBL
Match: A0A6J1KLE3 (uncharacterized protein LOC111495232 OS=Cucurbita maxima OX=3661 GN=LOC111495232 PE=4 SV=1) HSP 1 Score: 248.4 bits (633), Expect = 1.8e-62 Identity = 129/148 (87.16%), Postives = 138/148 (93.24%), Query Frame = 0
BLAST of HG10021420 vs. ExPASy TrEMBL
Match: A0A6J1EH69 (uncharacterized protein LOC111434271 OS=Cucurbita moschata OX=3662 GN=LOC111434271 PE=4 SV=1) HSP 1 Score: 246.1 bits (627), Expect = 9.1e-62 Identity = 127/148 (85.81%), Postives = 137/148 (92.57%), Query Frame = 0
BLAST of HG10021420 vs. ExPASy TrEMBL
Match: A0A5D3C2L6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold178G00520 PE=4 SV=1) HSP 1 Score: 235.3 bits (599), Expect = 1.6e-58 Identity = 128/153 (83.66%), Postives = 138/153 (90.20%), Query Frame = 0
BLAST of HG10021420 vs. ExPASy TrEMBL
Match: A0A1S3BC63 (uncharacterized protein LOC103488324 OS=Cucumis melo OX=3656 GN=LOC103488324 PE=4 SV=1) HSP 1 Score: 235.3 bits (599), Expect = 1.6e-58 Identity = 128/153 (83.66%), Postives = 138/153 (90.20%), Query Frame = 0
BLAST of HG10021420 vs. ExPASy TrEMBL
Match: A0A0A0LVV5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G538210 PE=4 SV=1) HSP 1 Score: 218.4 bits (555), Expect = 2.0e-53 Identity = 119/149 (79.87%), Postives = 132/149 (88.59%), Query Frame = 0
BLAST of HG10021420 vs. TAIR 10
Match: AT4G21740.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G30515.1); Has 20 Blast hits to 20 proteins in 4 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 20; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 68.6 bits (166), Expect = 5.0e-12 Identity = 55/133 (41.35%), Postives = 76/133 (57.14%), Query Frame = 0
BLAST of HG10021420 vs. TAIR 10
Match: AT1G30515.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 6 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G21740.1); Has 20 Blast hits to 20 proteins in 4 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 20; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 63.9 bits (154), Expect = 1.2e-10 Identity = 49/133 (36.84%), Postives = 72/133 (54.14%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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