HG10021417 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10021417
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	Protein DETOXIFICATION
Location	Chr05: 8868525 .. 8868704 (+)
RNA-Seq Expression	HG10021417
Synteny	HG10021417

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACTAGCCTTAGCCTTAGTTGGTGGTCGTTTGAGCTGGTTATCTTACTGTCCGGACTTCTTCCAAATCCGGAGCTTGAATCTTCAGTTCTATCTGTTTATGTTTATTTATTGACAATGTTGACGTCAAACTCATGCTACGAGGCTGGGATTGGAATGGTTGTTGCTATCAAAAGTTAA

mRNA sequence

ATGACTAGCCTTAGCCTTAGTTGGTGGTCGTTTGAGCTGGTTATCTTACTGTCCGGACTTCTTCCAAATCCGGAGCTTGAATCTTCAGTTCTATCTGTTTATGTTTATTTATTGACAATGTTGACGTCAAACTCATGCTACGAGGCTGGGATTGGAATGGTTGTTGCTATCAAAAGTTAA

Coding sequence (CDS)

ATGACTAGCCTTAGCCTTAGTTGGTGGTCGTTTGAGCTGGTTATCTTACTGTCCGGACTTCTTCCAAATCCGGAGCTTGAATCTTCAGTTCTATCTGTTTATGTTTATTTATTGACAATGTTGACGTCAAACTCATGCTACGAGGCTGGGATTGGAATGGTTGTTGCTATCAAAAGTTAA

Protein sequence

MTSLSLSWWSFELVILLSGLLPNPELESSVLSVYVYLLTMLTSNSCYEAGIGMVVAIKS

Homology

[Close]

BLAST of HG10021417 vs. NCBI nr
Match: XP_038891792.1 (protein DETOXIFICATION 10-like isoform X3 [Benincasa hispida] >XP_038891793.1 protein DETOXIFICATION 10-like isoform X3 [Benincasa hispida])

HSP 1 Score: 59.7 bits (143), Expect = 9.9e-06
Identity = 33/47 (70.21%), Postives = 37/47 (78.72%), Query Frame = 0


Query: 6   LSWWSFELVILLSGLLPNPELESSVLSVYVYLLTMLTSNSCYEAGIG 53
           LSWWSFEL+ILLSGLLPNPELESSVLSV    LT + + +C   GIG
Sbjct: 212 LSWWSFELIILLSGLLPNPELESSVLSVCFNTLTTVFTLAC---GIG 255

[Close]

BLAST of HG10021417 vs. NCBI nr
Match: XP_038891789.1 (protein DETOXIFICATION 12-like isoform X1 [Benincasa hispida])

HSP 1 Score: 59.7 bits (143), Expect = 9.9e-06
Identity = 33/47 (70.21%), Postives = 37/47 (78.72%), Query Frame = 0


Query: 6   LSWWSFELVILLSGLLPNPELESSVLSVYVYLLTMLTSNSCYEAGIG 53
           LSWWSFEL+ILLSGLLPNPELESSVLSV    LT + + +C   GIG
Sbjct: 262 LSWWSFELIILLSGLLPNPELESSVLSVCFNTLTTVFTLAC---GIG 305

[Close]

BLAST of HG10021417 vs. NCBI nr
Match: XP_038891790.1 (protein DETOXIFICATION 12-like isoform X2 [Benincasa hispida])

HSP 1 Score: 59.7 bits (143), Expect = 9.9e-06
Identity = 33/47 (70.21%), Postives = 37/47 (78.72%), Query Frame = 0


Query: 6   LSWWSFELVILLSGLLPNPELESSVLSVYVYLLTMLTSNSCYEAGIG 53
           LSWWSFEL+ILLSGLLPNPELESSVLSV    LT + + +C   GIG
Sbjct: 228 LSWWSFELIILLSGLLPNPELESSVLSVCFNTLTTVFTLAC---GIG 271

[Close]

BLAST of HG10021417 vs. NCBI nr
Match: XP_008446675.1 (PREDICTED: protein DETOXIFICATION 10-like isoform X2 [Cucumis melo])

HSP 1 Score: 58.9 bits (141), Expect = 1.7e-05
Identity = 32/47 (68.09%), Postives = 37/47 (78.72%), Query Frame = 0


Query: 6   LSWWSFELVILLSGLLPNPELESSVLSVYVYLLTMLTSNSCYEAGIG 53
           LSWWSFE++ILLSGLLPNPELESSVLSV    LT + + +C   GIG
Sbjct: 181 LSWWSFEMIILLSGLLPNPELESSVLSVCFNTLTTVFTLAC---GIG 224

[Close]

BLAST of HG10021417 vs. NCBI nr
Match: XP_004135382.3 (protein DETOXIFICATION 10 [Cucumis sativus] >KAE8648802.1 hypothetical protein Csa_009191 [Cucumis sativus])

HSP 1 Score: 58.9 bits (141), Expect = 1.7e-05
Identity = 32/47 (68.09%), Postives = 37/47 (78.72%), Query Frame = 0


Query: 6   LSWWSFELVILLSGLLPNPELESSVLSVYVYLLTMLTSNSCYEAGIG 53
           LSWWSFE++ILLSGLLPNPELESSVLSV    LT + + +C   GIG
Sbjct: 263 LSWWSFEMIILLSGLLPNPELESSVLSVCFNTLTTVFTLAC---GIG 306

[Close]

BLAST of HG10021417 vs. ExPASy Swiss-Prot
Match: F4HZH9 (Protein DETOXIFICATION 11 OS=Arabidopsis thaliana OX=3702 GN=DTX11 PE=3 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 5.4e-07
Identity = 27/40 (67.50%), Postives = 33/40 (82.50%), Query Frame = 0


Query: 4   LSLSWWSFELVILLSGLLPNPELESSVLSVYVYLLTMLTS 44
           L L WWS+EL+ILLSGLLPNP+LE+SVLSV +  L+M  S
Sbjct: 267 LCLEWWSYELIILLSGLLPNPQLETSVLSVCLQTLSMTYS 306

[Close]

BLAST of HG10021417 vs. ExPASy Swiss-Prot
Match: Q8L731 (Protein DETOXIFICATION 12 OS=Arabidopsis thaliana OX=3702 GN=DTX12 PE=2 SV=1)

HSP 1 Score: 51.6 bits (122), Expect = 3.5e-06
Identity = 24/40 (60.00%), Postives = 33/40 (82.50%), Query Frame = 0


Query: 4   LSLSWWSFELVILLSGLLPNPELESSVLSVYVYLLTMLTS 44
           + L WWS+EL+ILLSGLLPNP+LE+SVLSV +  ++ + S
Sbjct: 270 ICLEWWSYELIILLSGLLPNPQLETSVLSVCLQTISTMYS 309

[Close]

BLAST of HG10021417 vs. ExPASy Swiss-Prot
Match: Q94AL1 (Protein DETOXIFICATION 13 OS=Arabidopsis thaliana OX=3702 GN=DTX13 PE=2 SV=1)

HSP 1 Score: 51.6 bits (122), Expect = 3.5e-06
Identity = 23/30 (76.67%), Postives = 28/30 (93.33%), Query Frame = 0


Query: 4   LSLSWWSFELVILLSGLLPNPELESSVLSV 34
           + L WWS+EL+ILLSGLLPNP+LE+SVLSV
Sbjct: 271 ICLEWWSYELIILLSGLLPNPQLETSVLSV 300

[Close]

BLAST of HG10021417 vs. ExPASy Swiss-Prot
Match: Q8VYL8 (Protein DETOXIFICATION 10 OS=Arabidopsis thaliana OX=3702 GN=DTX10 PE=2 SV=1)

HSP 1 Score: 51.2 bits (121), Expect = 4.6e-06
Identity = 25/40 (62.50%), Postives = 32/40 (80.00%), Query Frame = 0


Query: 4   LSLSWWSFELVILLSGLLPNPELESSVLSVYVYLLTMLTS 44
           L L WWS+EL+ILLSGLLPNP+LE+SVLS+    L++  S
Sbjct: 267 LCLEWWSYELIILLSGLLPNPQLETSVLSICFETLSITYS 306

[Close]

BLAST of HG10021417 vs. ExPASy Swiss-Prot
Match: Q9C994 (Protein DETOXIFICATION 14 OS=Arabidopsis thaliana OX=3702 GN=DTX14 PE=1 SV=1)

HSP 1 Score: 49.3 bits (116), Expect = 1.7e-05
Identity = 24/45 (53.33%), Postives = 33/45 (73.33%), Query Frame = 0


Query: 4   LSLSWWSFELVILLSGLLPNPELESSVLSVYVYLLTMLTSNSCYE 49
           + L WWSFE ++LLSG+LPNP+LE+SVLSV      + T +S Y+
Sbjct: 262 ICLEWWSFEFLVLLSGILPNPKLEASVLSV-----CLSTQSSLYQ 301

[Close]

BLAST of HG10021417 vs. ExPASy TrEMBL
Match: A0A0A0KUL6 (Protein DETOXIFICATION OS=Cucumis sativus OX=3659 GN=Csa_5G611090 PE=3 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 8.1e-06
Identity = 32/47 (68.09%), Postives = 37/47 (78.72%), Query Frame = 0


Query: 6   LSWWSFELVILLSGLLPNPELESSVLSVYVYLLTMLTSNSCYEAGIG 53
           LSWWSFE++ILLSGLLPNPELESSVLSV    LT + + +C   GIG
Sbjct: 263 LSWWSFEMIILLSGLLPNPELESSVLSVCFNTLTTVFTLAC---GIG 306

[Close]

BLAST of HG10021417 vs. ExPASy TrEMBL
Match: A0A1S3BFN3 (Protein DETOXIFICATION OS=Cucumis melo OX=3656 GN=LOC103489327 PE=3 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 8.1e-06
Identity = 32/47 (68.09%), Postives = 37/47 (78.72%), Query Frame = 0


Query: 6   LSWWSFELVILLSGLLPNPELESSVLSVYVYLLTMLTSNSCYEAGIG 53
           LSWWSFE++ILLSGLLPNPELESSVLSV    LT + + +C   GIG
Sbjct: 263 LSWWSFEMIILLSGLLPNPELESSVLSVCFNTLTTVFTLAC---GIG 306

[Close]

BLAST of HG10021417 vs. ExPASy TrEMBL
Match: A0A1S3BFN0 (protein DETOXIFICATION 10-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103489327 PE=3 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 8.1e-06
Identity = 32/47 (68.09%), Postives = 37/47 (78.72%), Query Frame = 0


Query: 6   LSWWSFELVILLSGLLPNPELESSVLSVYVYLLTMLTSNSCYEAGIG 53
           LSWWSFE++ILLSGLLPNPELESSVLSV    LT + + +C   GIG
Sbjct: 181 LSWWSFEMIILLSGLLPNPELESSVLSVCFNTLTTVFTLAC---GIG 224

[Close]

BLAST of HG10021417 vs. ExPASy TrEMBL
Match: A0A5J9TCR6 (Protein DETOXIFICATION (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_42595 PE=3 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 1.1e-05
Identity = 29/47 (61.70%), Postives = 37/47 (78.72%), Query Frame = 0


Query: 4   LSLSWWSFELVILLSGLLPNPELESSVLSVYVYLLTMLTSNSCYEAG 51
           + L WWSFEL+ILLSGLLPNPEL+SSVLS+ +  +T+L +N  Y  G
Sbjct: 270 ICLEWWSFELLILLSGLLPNPELQSSVLSICLTSVTLLYTNIPYGLG 316

[Close]

BLAST of HG10021417 vs. ExPASy TrEMBL
Match: A0A6P5FUI5 (Protein DETOXIFICATION OS=Ananas comosus OX=4615 GN=LOC109717810 PE=3 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 2.4e-05
Identity = 32/55 (58.18%), Postives = 39/55 (70.91%), Query Frame = 0


Query: 4   LSLSWWSFELVILLSGLLPNPELESSVLSVYVYLLTMLTSNSCYEAGIGMVVAIK 59
           + L WWSFEL+ILLSGLLPNPELE+SVLS+    LT LT+      GIG   +I+
Sbjct: 278 MCLEWWSFELLILLSGLLPNPELEASVLSI---CLTCLTTLFTIPMGIGAAASIR 329

[Close]

BLAST of HG10021417 vs. TAIR 10
Match: AT1G15160.1 (MATE efflux family protein )

HSP 1 Score: 54.3 bits (129), Expect = 3.9e-08
Identity = 27/40 (67.50%), Postives = 33/40 (82.50%), Query Frame = 0


Query: 4   LSLSWWSFELVILLSGLLPNPELESSVLSVYVYLLTMLTS 44
           L L WWS+EL+ILLSGLLPNP+LE+SVLSV +  L+M  S
Sbjct: 267 LCLEWWSYELIILLSGLLPNPQLETSVLSVCLQTLSMTYS 306

[Close]

BLAST of HG10021417 vs. TAIR 10
Match: AT1G15180.1 (MATE efflux family protein )

HSP 1 Score: 51.6 bits (122), Expect = 2.5e-07
Identity = 23/30 (76.67%), Postives = 28/30 (93.33%), Query Frame = 0


Query: 4   LSLSWWSFELVILLSGLLPNPELESSVLSV 34
           + L WWS+EL+ILLSGLLPNP+LE+SVLSV
Sbjct: 271 ICLEWWSYELIILLSGLLPNPQLETSVLSV 300

[Close]

BLAST of HG10021417 vs. TAIR 10
Match: AT1G15170.1 (MATE efflux family protein )

HSP 1 Score: 51.6 bits (122), Expect = 2.5e-07
Identity = 24/40 (60.00%), Postives = 33/40 (82.50%), Query Frame = 0


Query: 4   LSLSWWSFELVILLSGLLPNPELESSVLSVYVYLLTMLTS 44
           + L WWS+EL+ILLSGLLPNP+LE+SVLSV +  ++ + S
Sbjct: 270 ICLEWWSYELIILLSGLLPNPQLETSVLSVCLQTISTMYS 309

[Close]

BLAST of HG10021417 vs. TAIR 10
Match: AT1G15180.2 (MATE efflux family protein )

HSP 1 Score: 51.6 bits (122), Expect = 2.5e-07
Identity = 23/30 (76.67%), Postives = 28/30 (93.33%), Query Frame = 0


Query: 4   LSLSWWSFELVILLSGLLPNPELESSVLSV 34
           + L WWS+EL+ILLSGLLPNP+LE+SVLSV
Sbjct: 151 ICLEWWSYELIILLSGLLPNPQLETSVLSV 180

[Close]

BLAST of HG10021417 vs. TAIR 10
Match: AT1G15150.1 (MATE efflux family protein )

HSP 1 Score: 51.2 bits (121), Expect = 3.3e-07
Identity = 25/40 (62.50%), Postives = 32/40 (80.00%), Query Frame = 0


Query: 4   LSLSWWSFELVILLSGLLPNPELESSVLSVYVYLLTMLTS 44
           L L WWS+EL+ILLSGLLPNP+LE+SVLS+    L++  S
Sbjct: 267 LCLEWWSYELIILLSGLLPNPQLETSVLSICFETLSITYS 306

The following BLAST results are available for this feature:

BLAST of HG10021417 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038891792.1	9.9e-06	70.21	protein DETOXIFICATION 10-like isoform X3 [Benincasa hispida] >XP_038891793.1 pr...	[more]
XP_038891789.1	9.9e-06	70.21	protein DETOXIFICATION 12-like isoform X1 [Benincasa hispida]	[more]
XP_038891790.1	9.9e-06	70.21	protein DETOXIFICATION 12-like isoform X2 [Benincasa hispida]	[more]
XP_008446675.1	1.7e-05	68.09	PREDICTED: protein DETOXIFICATION 10-like isoform X2 [Cucumis melo]	[more]
XP_004135382.3	1.7e-05	68.09	protein DETOXIFICATION 10 [Cucumis sativus] >KAE8648802.1 hypothetical protein C...	[more]

BLAST of HG10021417 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4HZH9	5.4e-07	67.50	Protein DETOXIFICATION 11 OS=Arabidopsis thaliana OX=3702 GN=DTX11 PE=3 SV=1	[more]
Q8L731	3.5e-06	60.00	Protein DETOXIFICATION 12 OS=Arabidopsis thaliana OX=3702 GN=DTX12 PE=2 SV=1	[more]
Q94AL1	3.5e-06	76.67	Protein DETOXIFICATION 13 OS=Arabidopsis thaliana OX=3702 GN=DTX13 PE=2 SV=1	[more]
Q8VYL8	4.6e-06	62.50	Protein DETOXIFICATION 10 OS=Arabidopsis thaliana OX=3702 GN=DTX10 PE=2 SV=1	[more]
Q9C994	1.7e-05	53.33	Protein DETOXIFICATION 14 OS=Arabidopsis thaliana OX=3702 GN=DTX14 PE=1 SV=1	[more]

BLAST of HG10021417 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KUL6	8.1e-06	68.09	Protein DETOXIFICATION OS=Cucumis sativus OX=3659 GN=Csa_5G611090 PE=3 SV=1	[more]
A0A1S3BFN3	8.1e-06	68.09	Protein DETOXIFICATION OS=Cucumis melo OX=3656 GN=LOC103489327 PE=3 SV=1	[more]
A0A1S3BFN0	8.1e-06	68.09	protein DETOXIFICATION 10-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC10348932...	[more]
A0A5J9TCR6	1.1e-05	61.70	Protein DETOXIFICATION (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_42595 ...	[more]
A0A6P5FUI5	2.4e-05	58.18	Protein DETOXIFICATION OS=Ananas comosus OX=4615 GN=LOC109717810 PE=3 SV=1	[more]

BLAST of HG10021417 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G15160.1	3.9e-08	67.50	MATE efflux family protein	[more]
AT1G15180.1	2.5e-07	76.67	MATE efflux family protein	[more]
AT1G15170.1	2.5e-07	60.00	MATE efflux family protein	[more]
AT1G15180.2	2.5e-07	76.67	MATE efflux family protein	[more]
AT1G15150.1	3.3e-07	62.50	MATE efflux family protein	[more]

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10021417.1	HG10021417.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:1990961	xenobiotic detoxification by transmembrane export across the plasma membrane
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0015297	antiporter activity
molecular_function	GO:0042910	xenobiotic transmembrane transporter activity