Homology
BLAST of HG10021379 vs. NCBI nr
Match:
XP_038894029.1 (pentatricopeptide repeat-containing protein At1g11290, chloroplastic-like [Benincasa hispida])
HSP 1 Score: 1359.7 bits (3518), Expect = 0.0e+00
Identity = 670/721 (92.93%), Postives = 691/721 (95.84%), Query Frame = 0
Query: 1 MLHLQRSKPIIQSPIFPNFPATQSRLLNTLSFLFNRCSSRQHLQQIHARFVLHGFHQNPT 60
MLHLQRSKP+I S IFPNFPATQSRLLNTLSFLF+RCSSRQHL+QIHARFVLHGFHQNPT
Sbjct: 34 MLHLQRSKPVIHSLIFPNFPATQSRLLNTLSFLFDRCSSRQHLKQIHARFVLHGFHQNPT 93
Query: 61 LSSKLIDCYANLGLLNLSLQVFYAIIDPNSTLYNAILRNLTRYGECERTLLVYQQMVAKS 120
LSSKLIDCYANLGLLNLSLQVFY+I +PNST+YNAILRNLTRYGECERTLLVY+QMVAKS
Sbjct: 94 LSSKLIDCYANLGLLNLSLQVFYSITEPNSTIYNAILRNLTRYGECERTLLVYRQMVAKS 153
Query: 121 MHPDEETYPSVLRSCCSFSNVGFGRKVHGYLVKLGFDSFDMVATALAEMYEECIDFEHAH 180
MHPDEETYPSVLRSCCSFSNVG GRK+HGYLVKLGFDSFDMVATAL EMYEECIDFE AH
Sbjct: 154 MHPDEETYPSVLRSCCSFSNVGSGRKIHGYLVKLGFDSFDMVATALGEMYEECIDFESAH 213
Query: 181 QLFDKRSVKDLECWSSLTTETPQNGNGEGIFRLFGRMRAEQLVPDSLTFINLLRSIAGLN 240
QLFDKRSVKDLECWSS TTE PQNGNGEGIF +FGRMR EQLV DSLTFINLLR IAG N
Sbjct: 214 QLFDKRSVKDLECWSSFTTEAPQNGNGEGIFGVFGRMRVEQLVTDSLTFINLLRFIAGFN 273
Query: 241 SIRLAKIVHSITIVSKLCGDLLVNTALLSLYSKLGSLVDARKLFDKMPEKDRVVWNIMIA 300
SI+LAKIVH I IVSKLCGDLLVNTA+LSLYSKLGSLVDARKLFDKMPE DRVVWNIMIA
Sbjct: 274 SIQLAKIVHCIAIVSKLCGDLLVNTAVLSLYSKLGSLVDARKLFDKMPENDRVVWNIMIA 333
Query: 301 AYARGGKPTECLELFKSMARSGIRSDMFTALPVISSISQLKCVDWGKQTHAHVLRNGSDS 360
AYAR GKPTECL LFKSMARSGIRSDMFTALPVISSISQLK DWGKQTHA++LRNGSDS
Sbjct: 334 AYAREGKPTECLALFKSMARSGIRSDMFTALPVISSISQLKYFDWGKQTHAYILRNGSDS 393
Query: 361 QVSVHNSLIDMYRECNILDSACKIFNCMTDKSVISWSAMIKGYVKHGQSLIALSLFSRMK 420
QVSV+NSLIDMY ECNILDSACKIFN M DK+VISWSAMIKGYVKHG SLIALSLFS MK
Sbjct: 394 QVSVYNSLIDMYCECNILDSACKIFNWMKDKTVISWSAMIKGYVKHGHSLIALSLFSSMK 453
Query: 421 SDGIQADFITVINILPAFVHIGVLENVKYLHGYSMKLGLTSLPSLNTALLITYAKCGCIE 480
SDGIQ+DFITVINILPAFVHIGVLENVKYLHGYSMKLGLTSLPSLNTALLITYAKCGCIE
Sbjct: 454 SDGIQSDFITVINILPAFVHIGVLENVKYLHGYSMKLGLTSLPSLNTALLITYAKCGCIE 513
Query: 481 MAQRIFEEERIDDKDLIMWNSMISAHANHGEWSQCFKLYNQMKCSNTKPDQVTFLGLLTA 540
MAQRIFEEERIDDKDLIMWNSMISAHANHG+WSQCFKLYNQMKCSNTKPDQVTFLGLLTA
Sbjct: 514 MAQRIFEEERIDDKDLIMWNSMISAHANHGDWSQCFKLYNQMKCSNTKPDQVTFLGLLTA 573
Query: 541 CVNSGLVERGKEFFKEMTENYDCQPSQEHYACMVNLLGRAGLINEAGELVRNMPIKPDAR 600
CVNSGLVE+GKEF KEMTENY CQPSQEHYACMVNLLGRAGLINEAGELVRNMPIKPDAR
Sbjct: 574 CVNSGLVEKGKEFLKEMTENYGCQPSQEHYACMVNLLGRAGLINEAGELVRNMPIKPDAR 633
Query: 601 VWGPLLSACKLHPGSKLAEFAAEKLIDMEPKNAGNYILLSNIYAAAGKWDGVAKMRSFLR 660
VWGPLLSACKLHPGSKLAEFAAEKL+DMEPKNAGNYILLSNIYAAAGKWD VAKMRSFLR
Sbjct: 634 VWGPLLSACKLHPGSKLAEFAAEKLVDMEPKNAGNYILLSNIYAAAGKWDEVAKMRSFLR 693
Query: 661 DKGLKKTPGCSWLEINGHVTEFRVADQTHPRAEDIYTILGNLELEIKEVREKSIDKL-NP 720
DKGLKKTPGCSWLEINGHVTEFRVADQTHPRAEDIYTILGNLELEIKE REKS++KL NP
Sbjct: 694 DKGLKKTPGCSWLEINGHVTEFRVADQTHPRAEDIYTILGNLELEIKEAREKSLEKLGNP 753
BLAST of HG10021379 vs. NCBI nr
Match:
XP_008444579.1 (PREDICTED: pentatricopeptide repeat-containing protein At1g11290, chloroplastic-like [Cucumis melo] >KAA0054005.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYK20690.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])
HSP 1 Score: 1281.5 bits (3315), Expect = 0.0e+00
Identity = 639/721 (88.63%), Postives = 675/721 (93.62%), Query Frame = 0
Query: 1 MLHLQRSKPIIQSPIFPNFPATQSRLLNTLSFLFNRCSSRQHLQQIHARFVLHGFHQNPT 60
MLHLQRSKPII +PI NFPATQSRLLNTLS LFNRC+S QHLQQIHARF+LHGFHQNPT
Sbjct: 1 MLHLQRSKPIIHTPILLNFPATQSRLLNTLSLLFNRCNSIQHLQQIHARFILHGFHQNPT 60
Query: 61 LSSKLIDCYANLGLLNLSLQVFYAIIDPNSTLYNAILRNLTRYGECERTLLVYQQMVAKS 120
LSSKLIDCYANLGLL SLQVF +IIDPN TL+NAILRNLTRYGE ER LLVYQQMVAKS
Sbjct: 61 LSSKLIDCYANLGLLKHSLQVFCSIIDPNLTLFNAILRNLTRYGESERALLVYQQMVAKS 120
Query: 121 MHPDEETYPSVLRSCCSFSNVGFGRKVHGYLVKLGFDSFDMVATALAEMYEECIDFEHAH 180
MHPDEETYP + RSC SFSNVGFGR +HGYLVKLGFDSFD+VATALAEMYE+ I FE+AH
Sbjct: 121 MHPDEETYPFIFRSCSSFSNVGFGRTIHGYLVKLGFDSFDVVATALAEMYEKWIAFENAH 180
Query: 181 QLFDKRSVKDLECWSSLTTETPQNGNGEGIFRLFGRMRAEQLVPDSLTFINLLRSIAGLN 240
QLFDKRSVKDL SSLTTE QNGNGEGIFR+F RMRAEQLVPDSLTF+NLLR IAGLN
Sbjct: 181 QLFDKRSVKDLGWSSSLTTEGSQNGNGEGIFRVFVRMRAEQLVPDSLTFVNLLRFIAGLN 240
Query: 241 SIRLAKIVHSITIVSKLCGDLLVNTALLSLYSKLGSLVDARKLFDKMPEKDRVVWNIMIA 300
SI+LAKIVH I IVSKL GDLLV TA+LSLYSKL SLVDAR+LFDKMPEKDRVVWNIMIA
Sbjct: 241 SIQLAKIVHCIAIVSKLSGDLLVYTAVLSLYSKLRSLVDARRLFDKMPEKDRVVWNIMIA 300
Query: 301 AYARGGKPTECLELFKSMARSGIRSDMFTALPVISSISQLKCVDWGKQTHAHVLRNGSDS 360
AYAR GKP ECLELFKSMARSGIRSD+FTALPVISSI+QLKCVDWGKQTHAH+LRNGSDS
Sbjct: 301 AYAREGKPRECLELFKSMARSGIRSDLFTALPVISSIAQLKCVDWGKQTHAHILRNGSDS 360
Query: 361 QVSVHNSLIDMYRECNILDSACKIFNCMTDKSVISWSAMIKGYVKHGQSLIALSLFSRMK 420
QVSVHNSLIDMY EC +LDSAC IFN MTDKSVISWSAMIKGYVK+GQSL A SLFS+MK
Sbjct: 361 QVSVHNSLIDMYCECKMLDSACNIFNWMTDKSVISWSAMIKGYVKNGQSLTASSLFSKMK 420
Query: 421 SDGIQADFITVINILPAFVHIGVLENVKYLHGYSMKLGLTSLPSLNTALLITYAKCGCIE 480
SDGIQADF+T+INILPAFVHIG LENVKYLHGYSMKLGLTSLPSLNTALLITYAKCG IE
Sbjct: 421 SDGIQADFVTMINILPAFVHIGALENVKYLHGYSMKLGLTSLPSLNTALLITYAKCGYIE 480
Query: 481 MAQRIFEEERIDDKDLIMWNSMISAHANHGEWSQCFKLYNQMKCSNTKPDQVTFLGLLTA 540
MAQR+FEEERIDDKDLIMWNSMISAHANHG+WSQCFKLYN+MKCSN+KPDQVTFLGLLTA
Sbjct: 481 MAQRLFEEERIDDKDLIMWNSMISAHANHGDWSQCFKLYNRMKCSNSKPDQVTFLGLLTA 540
Query: 541 CVNSGLVERGKEFFKEMTENYDCQPSQEHYACMVNLLGRAGLINEAGELVRNMPIKPDAR 600
CVNSGL+E+GKEFFKEMTE+Y C PSQEH+ACMVNLLGRAGLI+EAGELVRNMPIKPDAR
Sbjct: 541 CVNSGLIEKGKEFFKEMTESYGCLPSQEHFACMVNLLGRAGLISEAGELVRNMPIKPDAR 600
Query: 601 VWGPLLSACKLHPGSKLAEFAAEKLIDMEPKNAGNYILLSNIYAAAGKWDGVAKMRSFLR 660
VWGPLLSACK+HPGSKLAEFAAEKLIDMEPKNAGNYILLSNIYAAAGKW+ VAKMRSFLR
Sbjct: 601 VWGPLLSACKMHPGSKLAEFAAEKLIDMEPKNAGNYILLSNIYAAAGKWEEVAKMRSFLR 660
Query: 661 DKGLKKTPGCSWLEINGHVTEFRVADQTHPRAEDIYTILGNLELEIKEVREKSIDKL-NP 720
+KGLKKTPGCS LEING VTEFRVADQTHPRAEDIYTILGNLELEIKEVREKS+D L NP
Sbjct: 661 NKGLKKTPGCSSLEINGRVTEFRVADQTHPRAEDIYTILGNLELEIKEVREKSLDTLVNP 720
BLAST of HG10021379 vs. NCBI nr
Match:
XP_022139869.1 (pentatricopeptide repeat-containing protein At1g11290, chloroplastic-like [Momordica charantia])
HSP 1 Score: 1248.8 bits (3230), Expect = 0.0e+00
Identity = 615/720 (85.42%), Postives = 657/720 (91.25%), Query Frame = 0
Query: 1 MLHLQRSKPIIQSPIFPNFPATQSRLLNTLSFLFNRCSSRQHLQQIHARFVLHGFHQNPT 60
MLHLQRSKPI + F NFPATQSR LNTLSFLF+RCSSRQ L+QIHARF+LHG HQNP
Sbjct: 1 MLHLQRSKPIFRFE-FSNFPATQSRPLNTLSFLFSRCSSRQQLEQIHARFILHGLHQNPA 60
Query: 61 LSSKLIDCYANLGLLNLSLQVFYAIIDPNSTLYNAILRNLTRYGECERTLLVYQQMVAKS 120
LS +LID YANLGLL LS QVF +IIDP STLY+AILRNL+ +GE ERTLLVY++M AKS
Sbjct: 61 LSCELIDSYANLGLLTLSQQVFNSIIDPTSTLYSAILRNLSSFGEYERTLLVYREMFAKS 120
Query: 121 MHPDEETYPSVLRSCCSFSNVGFGRKVHGYLVKLGFDSFDMVATALAEMYEECIDFEHAH 180
MHPDEETYPSVLRSCC SNV +GRK+HG+LVKLG D +D ATALAEMY +CI FE+ H
Sbjct: 121 MHPDEETYPSVLRSCCCLSNVEYGRKIHGHLVKLGVDLYDSTATALAEMYRKCIGFENGH 180
Query: 181 QLFDKRSVKDLECWSSLTTETPQNGNGEGIFRLFGRMRAEQLVPDSLTFINLLRSIAGLN 240
LFDK +KD ECW+SL +E QNGNG+ IF+LFGRMR EQLV DSLTFINLLRSI GLN
Sbjct: 181 DLFDKMPMKDFECWNSLNSEASQNGNGDEIFQLFGRMRTEQLVSDSLTFINLLRSIVGLN 240
Query: 241 SIRLAKIVHSITIVSKLCGDLLVNTALLSLYSKLGSLVDARKLFDKMPEKDRVVWNIMIA 300
SI+LAKIVH + I S LCGDLLVNTA+LSLYSKLG LV+ARKLFDKMPEKDRVVWNIMIA
Sbjct: 241 SIQLAKIVHCVAITSNLCGDLLVNTAVLSLYSKLGCLVNARKLFDKMPEKDRVVWNIMIA 300
Query: 301 AYARGGKPTECLELFKSMARSGIRSDMFTALPVISSISQLKCVDWGKQTHAHVLRNGSDS 360
AY R G P ECLELFKSMARSGIR+D+FTALPVISSISQLKCVDWGKQTHAH LRNGSD+
Sbjct: 301 AYDREGNPAECLELFKSMARSGIRADLFTALPVISSISQLKCVDWGKQTHAHTLRNGSDN 360
Query: 361 QVSVHNSLIDMYRECNILDSACKIFNCMTDKSVISWSAMIKGYVKHGQSLIALSLFSRMK 420
QVSVHNSLIDMY E NILDSACKIF+ MT+K+VISWSAMIKG VKHGQSL ALSLFSRMK
Sbjct: 361 QVSVHNSLIDMYCELNILDSACKIFSWMTNKTVISWSAMIKGCVKHGQSLNALSLFSRMK 420
Query: 421 SDGIQADFITVINILPAFVHIGVLENVKYLHGYSMKLGLTSLPSLNTALLITYAKCGCIE 480
SDGIQADFITVINILPAFVHIG LENVKYLHGYSMKLGLTSLPSLNTALLITYAKCGCIE
Sbjct: 421 SDGIQADFITVINILPAFVHIGALENVKYLHGYSMKLGLTSLPSLNTALLITYAKCGCIE 480
Query: 481 MAQRIFEEERIDDKDLIMWNSMISAHANHGEWSQCFKLYNQMKCSNTKPDQVTFLGLLTA 540
MAQR+FEEER+DDKDLIMWNSMISAHANHG+WSQCFK+YNQMKCSN++PDQVTFLGLLTA
Sbjct: 481 MAQRLFEEERVDDKDLIMWNSMISAHANHGDWSQCFKIYNQMKCSNSRPDQVTFLGLLTA 540
Query: 541 CVNSGLVERGKEFFKEMTENYDCQPSQEHYACMVNLLGRAGLINEAGELVRNMPIKPDAR 600
CVNSGLVE+GKE FKEM ENY CQPSQEHYACMVNLLGRAGLIN+AG LVRNMPIKPDAR
Sbjct: 541 CVNSGLVEKGKECFKEMIENYGCQPSQEHYACMVNLLGRAGLINDAGALVRNMPIKPDAR 600
Query: 601 VWGPLLSACKLHPGSKLAEFAAEKLIDMEPKNAGNYILLSNIYAAAGKWDGVAKMRSFLR 660
VWGPLLSACKLHPGSKLAEFAAEKLIDMEPKNAGNYILLSNIYAAAGKWDGVAKMRSFLR
Sbjct: 601 VWGPLLSACKLHPGSKLAEFAAEKLIDMEPKNAGNYILLSNIYAAAGKWDGVAKMRSFLR 660
Query: 661 DKGLKKTPGCSWLEINGHVTEFRVADQTHPRAEDIYTILGNLELEIKEVREKSIDKLNPL 720
DKGLKKTPGCSWLEINGHVTEFRVAD+THPRAEDIYTILGNLELEIKE REKS +KL L
Sbjct: 661 DKGLKKTPGCSWLEINGHVTEFRVADRTHPRAEDIYTILGNLELEIKEAREKSPEKLGIL 719
BLAST of HG10021379 vs. NCBI nr
Match:
KAG6573373.1 (Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 1244.6 bits (3219), Expect = 0.0e+00
Identity = 610/717 (85.08%), Postives = 657/717 (91.63%), Query Frame = 0
Query: 1 MLHLQRSKPIIQSPIFPNFPATQSRLLNTLSFLFNRCSSRQHLQQIHARFVLHGFHQNPT 60
M HLQRSKPI + FPNFPATQSRLLNTLS LF+RC SRQ LQQIHARFVLHGFHQNPT
Sbjct: 1 MFHLQRSKPIFRFK-FPNFPATQSRLLNTLSSLFSRCKSRQQLQQIHARFVLHGFHQNPT 60
Query: 61 LSSKLIDCYANLGLLNLSLQVFYAIIDPNSTLYNAILRNLTRYGECERTLLVYQQMVAKS 120
LS KLIDCYAN GLLNLS VF +IIDPNS LYNAILRNLTR+GE ERTLLVY++MVAKS
Sbjct: 61 LSCKLIDCYANFGLLNLSHHVFNSIIDPNSALYNAILRNLTRFGEYERTLLVYREMVAKS 120
Query: 121 MHPDEETYPSVLRSCCSFSNVGFGRKVHGYLVKLGFDSFDMVATALAEMYEECIDFEHAH 180
MHPDE+TYP VLRSCC SNV FG+ +HG L+KLG DS+D V T L EMYE+CIDFE+AH
Sbjct: 121 MHPDEQTYPFVLRSCCCLSNVQFGKNIHGCLIKLGVDSYDTVVTVLVEMYEKCIDFENAH 180
Query: 181 QLFDKRSVKDLECWSSLTTETPQNGNGEGIFRLFGRMRAEQLVPDSLTFINLLRSIAGLN 240
QLFDK SVKDL+CWSSL TE PQNGNG+ I RLFGRM++E LV DSLTFINLLRS++GL+
Sbjct: 181 QLFDKMSVKDLDCWSSLITEAPQNGNGDDISRLFGRMKSEPLVTDSLTFINLLRSVSGLS 240
Query: 241 SIRLAKIVHSITIVSKLCGDLLVNTALLSLYSKLGSLVDARKLFDKMPEKDRVVWNIMIA 300
SI+LAKIVH I IVS LCGDLLV+TA+LSLYSKLGSLVDARKLF+K+PEKDRVVWNIMIA
Sbjct: 241 SIQLAKIVHCIAIVSNLCGDLLVDTAVLSLYSKLGSLVDARKLFEKIPEKDRVVWNIMIA 300
Query: 301 AYARGGKPTECLELFKSMARSGIRSDMFTALPVISSISQLKCVDWGKQTHAHVLRNGSDS 360
AYAR G+P ECLELF+SMARSGIR+D+FTALPVISSISQLK DWGKQTHA++LRNGSDS
Sbjct: 301 AYAREGRPMECLELFESMARSGIRADLFTALPVISSISQLKRADWGKQTHANILRNGSDS 360
Query: 361 QVSVHNSLIDMYRECNILDSACKIFNCMTDKSVISWSAMIKGYVKHGQSLIALSLFSRMK 420
QVSVHNSLIDMY ECN LDSACKIFN +T+K+VISWSAMIKG VKHG LIALSLF RMK
Sbjct: 361 QVSVHNSLIDMYCECNSLDSACKIFNSVTNKTVISWSAMIKGNVKHGYPLIALSLFFRMK 420
Query: 421 SDGIQADFITVINILPAFVHIGVLENVKYLHGYSMKLGLTSLPSLNTALLITYAKCGCIE 480
SDGIQADFITVINI+PAFV IG LENVKYLHGYS+KL LTSLPSLNTALLITYAKCGCI+
Sbjct: 421 SDGIQADFITVINIMPAFVDIGALENVKYLHGYSLKLALTSLPSLNTALLITYAKCGCID 480
Query: 481 MAQRIFEEERIDDKDLIMWNSMISAHANHGEWSQCFKLYNQMKCSNTKPDQVTFLGLLTA 540
MAQR+FEEER+DDKDLIMWNSMISAHANHG+WSQCF LYNQMKCSN+ PDQVTFLGLLTA
Sbjct: 481 MAQRLFEEERVDDKDLIMWNSMISAHANHGDWSQCFNLYNQMKCSNSNPDQVTFLGLLTA 540
Query: 541 CVNSGLVERGKEFFKEMTENYDCQPSQEHYACMVNLLGRAGLINEAGELVRNMPIKPDAR 600
CVNSGLVE+GKEFFKEM E+Y CQPSQEHYACMVNLLGRAGLINEAGELVRNMPIKPDAR
Sbjct: 541 CVNSGLVEKGKEFFKEMIESYSCQPSQEHYACMVNLLGRAGLINEAGELVRNMPIKPDAR 600
Query: 601 VWGPLLSACKLHPGSKLAEFAAEKLIDMEPKNAGNYILLSNIYAAAGKWDGVAKMRSFLR 660
VWGPLLSACKLHPGSKLAEFAAEKLIDMEPKNAGNYILLSNIYAAAGKWDGVAKMRSFLR
Sbjct: 601 VWGPLLSACKLHPGSKLAEFAAEKLIDMEPKNAGNYILLSNIYAAAGKWDGVAKMRSFLR 660
Query: 661 DKGLKKTPGCSWLEINGHVTEFRVADQTHPRAEDIYTILGNLELEIKEVREKSIDKL 718
DKGLKKTPGCSWLEING V EFRVAD+THPRAEDIY ILGNLEL+IKE +E S +KL
Sbjct: 661 DKGLKKTPGCSWLEINGRVAEFRVADRTHPRAEDIYAILGNLELDIKEAKEMSPEKL 716
BLAST of HG10021379 vs. NCBI nr
Match:
XP_023541395.1 (pentatricopeptide repeat-containing protein At1g11290, chloroplastic-like [Cucurbita pepo subsp. pepo])
HSP 1 Score: 1244.6 bits (3219), Expect = 0.0e+00
Identity = 610/724 (84.25%), Postives = 660/724 (91.16%), Query Frame = 0
Query: 1 MLHLQRSKPIIQSPI----FPNFPATQSRLLNTLSFLFNRCSSRQHLQQIHARFVLHGFH 60
M HLQRSKPI QSPI FPNFPATQSRL NTLS LF+RC SRQ LQQIHARFVLHGFH
Sbjct: 1 MFHLQRSKPITQSPIFRFKFPNFPATQSRLFNTLSSLFSRCKSRQQLQQIHARFVLHGFH 60
Query: 61 QNPTLSSKLIDCYANLGLLNLSLQVFYAIIDPNSTLYNAILRNLTRYGECERTLLVYQQM 120
QNPTLS KLIDCYAN GLLNLS VF +IIDPNSTLYNAILRNLTR+GE ERTLL+Y++M
Sbjct: 61 QNPTLSCKLIDCYANFGLLNLSHHVFNSIIDPNSTLYNAILRNLTRFGEYERTLLMYREM 120
Query: 121 VAKSMHPDEETYPSVLRSCCSFSNVGFGRKVHGYLVKLGFDSFDMVATALAEMYEECIDF 180
V KSMHPDE+TYP VLRSCC S+V FG+ +HG L+KLG DS+D V T LAEMYE+CIDF
Sbjct: 121 VGKSMHPDEQTYPFVLRSCCCLSHVEFGKNIHGCLIKLGVDSYDTVVTVLAEMYEKCIDF 180
Query: 181 EHAHQLFDKRSVKDLECWSSLTTETPQNGNGEGIFRLFGRMRAEQLVPDSLTFINLLRSI 240
E+AHQLFDK SVKDL+CWSSL +E PQNGNG+ I LFGRM++E +V DSLTFIN LRS+
Sbjct: 181 ENAHQLFDKMSVKDLDCWSSLMSEAPQNGNGDDISLLFGRMKSEPIVTDSLTFINRLRSV 240
Query: 241 AGLNSIRLAKIVHSITIVSKLCGDLLVNTALLSLYSKLGSLVDARKLFDKMPEKDRVVWN 300
+GL+SI+LAKIVH I IVS LCGDLLV+TA+LSLYSKLGSLVDARKLF+KMPEKDRVVWN
Sbjct: 241 SGLSSIQLAKIVHCIAIVSNLCGDLLVDTAVLSLYSKLGSLVDARKLFEKMPEKDRVVWN 300
Query: 301 IMIAAYARGGKPTECLELFKSMARSGIRSDMFTALPVISSISQLKCVDWGKQTHAHVLRN 360
IMIAAYAR G+P ECLELF+SMARSGIR+D+FTALPVISSISQLK DWGKQTHA++LRN
Sbjct: 301 IMIAAYAREGRPMECLELFESMARSGIRADLFTALPVISSISQLKRADWGKQTHANILRN 360
Query: 361 GSDSQVSVHNSLIDMYRECNILDSACKIFNCMTDKSVISWSAMIKGYVKHGQSLIALSLF 420
GSDSQVSVHNSLIDMY ECN LDSACKIFN +T+K+VISWSAMIKG VKHG LIALSLF
Sbjct: 361 GSDSQVSVHNSLIDMYCECNSLDSACKIFNSVTNKTVISWSAMIKGNVKHGYPLIALSLF 420
Query: 421 SRMKSDGIQADFITVINILPAFVHIGVLENVKYLHGYSMKLGLTSLPSLNTALLITYAKC 480
RMKSDGIQADFITVINI+PAFV IG LENVKYLHGYS+KL LTSLPSLNTALLITYAKC
Sbjct: 421 FRMKSDGIQADFITVINIMPAFVDIGALENVKYLHGYSLKLALTSLPSLNTALLITYAKC 480
Query: 481 GCIEMAQRIFEEERIDDKDLIMWNSMISAHANHGEWSQCFKLYNQMKCSNTKPDQVTFLG 540
GCI+MAQR+FEEER+DDKDLIMWNSMISAHANHG+WSQCFKLY+QMKCSN+ PDQVTFLG
Sbjct: 481 GCIDMAQRLFEEERVDDKDLIMWNSMISAHANHGDWSQCFKLYSQMKCSNSNPDQVTFLG 540
Query: 541 LLTACVNSGLVERGKEFFKEMTENYDCQPSQEHYACMVNLLGRAGLINEAGELVRNMPIK 600
LLTACVNSGLVE+GKEFFKEM E+Y CQPSQEHYACMVNLLGRAGLINEAGELVRNMPIK
Sbjct: 541 LLTACVNSGLVEKGKEFFKEMIESYSCQPSQEHYACMVNLLGRAGLINEAGELVRNMPIK 600
Query: 601 PDARVWGPLLSACKLHPGSKLAEFAAEKLIDMEPKNAGNYILLSNIYAAAGKWDGVAKMR 660
PDARVWGPLLSACKLHPGSKLAEFAAEKLIDMEPKNAGNYILLSNIYAAAGKWDGVAKMR
Sbjct: 601 PDARVWGPLLSACKLHPGSKLAEFAAEKLIDMEPKNAGNYILLSNIYAAAGKWDGVAKMR 660
Query: 661 SFLRDKGLKKTPGCSWLEINGHVTEFRVADQTHPRAEDIYTILGNLELEIKEVREKSIDK 720
SFLRDKGLKKTPGCSWLEING V EFRVAD+THPRAEDIY ILGNLEL+IKE +E S +K
Sbjct: 661 SFLRDKGLKKTPGCSWLEINGRVAEFRVADRTHPRAEDIYAILGNLELDIKEAKEMSPEK 720
BLAST of HG10021379 vs. ExPASy Swiss-Prot
Match:
Q3E6Q1 (Pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H40 PE=2 SV=1)
HSP 1 Score: 436.4 bits (1121), Expect = 6.2e-121
Identity = 236/718 (32.87%), Postives = 391/718 (54.46%), Query Frame = 0
Query: 7 SKPIIQSPIFPNFPATQSRLLNTLS---------------FLFNRCSSRQHLQQIHARFV 66
S ++Q P P SR + LS L RCSS + L+QI
Sbjct: 2 SSQLVQFSTVPQIPNPPSRHRHFLSERNYIPANVYEHPAALLLERCSSLKELRQILPLVF 61
Query: 67 LHGFHQNPTLSSKLIDCYANLGLLNLSLQVFYAIIDPNSTLYNAILRNLTRYGECERTLL 126
+G +Q +KL+ + G ++ + +VF I + LY+ +L+ + + ++ L
Sbjct: 62 KNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQ 121
Query: 127 VYQQMVAKSMHPDEETYPSVLRSCCSFSNVGFGRKVHGYLVKLGFDSFDMVA-TALAEMY 186
+ +M + P + +L+ C + + G+++HG LVK GF S D+ A T L MY
Sbjct: 122 FFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGF-SLDLFAMTGLENMY 181
Query: 187 EECIDFEHAHQLFDKRSVKDLECWSSLTTETPQNGNGEGIFRLFGRMRAEQLVPDSLTFI 246
+C A ++FD+ +DL W+++ QNG + M E L P +T +
Sbjct: 182 AKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIV 241
Query: 247 NLLRSIAGLNSIRLAKIVHSITIVSKLCGDLLVNTALLSLYSKLGSLVDARKLFDKMPEK 306
++L +++ L I + K +H + S + ++TAL+ +Y+K GSL AR+LFD M E+
Sbjct: 242 SVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLER 301
Query: 307 DRVVWNIMIAAYARGGKPTECLELFKSMARSGIRSDMFTALPVISSISQLKCVDWGKQTH 366
+ V WN MI AY + P E + +F+ M G++ + + + + + L ++ G+ H
Sbjct: 302 NVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIH 361
Query: 367 AHVLRNGSDSQVSVHNSLIDMYRECNILDSACKIFNCMTDKSVISWSAMIKGYVKHGQSL 426
+ G D VSV NSLI MY +C +D+A +F + ++++SW+AMI G+ ++G+ +
Sbjct: 362 KLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPI 421
Query: 427 IALSLFSRMKSDGIQADFITVINILPAFVHIGVLENVKYLHGYSMKLGLTSLPSLNTALL 486
AL+ FS+M+S ++ D T ++++ A + + + K++HG M+ L + TAL+
Sbjct: 422 DALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALV 481
Query: 487 ITYAKCGCIEMAQRIFEEERIDDKDLIMWNSMISAHANHGEWSQCFKLYNQMKCSNTKPD 546
YAKCG I +A+ IF + + ++ + WN+MI + HG +L+ +M+ KP+
Sbjct: 482 DMYAKCGAIMIARLIF--DMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPN 541
Query: 547 QVTFLGLLTACVNSGLVERGKEFFKEMTENYDCQPSQEHYACMVNLLGRAGLINEAGELV 606
VTFL +++AC +SGLVE G + F M ENY + S +HY MV+LLGRAG +NEA + +
Sbjct: 542 GVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFI 601
Query: 607 RNMPIKPDARVWGPLLSACKLHPGSKLAEFAAEKLIDMEPKNAGNYILLSNIYAAAGKWD 666
MP+KP V+G +L AC++H AE AAE+L ++ P + G ++LL+NIY AA W+
Sbjct: 602 MQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANIYRAASMWE 661
Query: 667 GVAKMRSFLRDKGLKKTPGCSWLEINGHVTEFRVADQTHPRAEDIYTILGNLELEIKE 709
V ++R + +GL+KTPGCS +EI V F HP ++ IY L L IKE
Sbjct: 662 KVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGSTAHPDSKKIYAFLEKLICHIKE 716
BLAST of HG10021379 vs. ExPASy Swiss-Prot
Match:
Q9LN01 (Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H12 PE=2 SV=1)
HSP 1 Score: 428.7 bits (1101), Expect = 1.3e-118
Identity = 243/685 (35.47%), Postives = 372/685 (54.31%), Query Frame = 0
Query: 29 TLSFLFNRCSSRQHLQQIHARFVLHGFHQNPTLSSKLID-CYANLGL--LNLSLQVFYAI 88
+LS L N C + Q L+ IHA+ + G H SKLI+ C + L ++ VF I
Sbjct: 36 SLSLLHN-CKTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTI 95
Query: 89 IDPNSTLYNAILRNLTRYGECERTLLVYQQMVAKSMHPDEETYPSVLRSCCSFSNVGFGR 148
+PN ++N + R + L +Y M++ + P+ T+P VL+SC G+
Sbjct: 96 QEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQ 155
Query: 149 KVHGYLVKLGFDSFDMVATALAEMYEECIDFEHAHQLFDKRSVKDLECWSSLTTETPQNG 208
++HG+++KLG D V T+L MY + E AH++FDK +D+ +
Sbjct: 156 QIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSY----------- 215
Query: 209 NGEGIFRLFGRMRAEQLVPDSLTFINLLRSIAGLNSIRLAKIVHSITIVSKLCGDLLVNT 268
T
Sbjct: 216 -----------------------------------------------------------T 275
Query: 269 ALLSLYSKLGSLVDARKLFDKMPEKDRVVWNIMIAAYARGGKPTECLELFKSMARSGIRS 328
AL+ Y+ G + +A+KLFD++P KD V WN MI+ YA G E LELFK M ++ +R
Sbjct: 276 ALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRP 335
Query: 329 DMFTALPVISSISQLKCVDWGKQTHAHVLRNGSDSQVSVHNSLIDMYRECNILDSACKIF 388
D T + V+S+ +Q ++ G+Q H + +G S + + N+LID+Y +C L++AC +F
Sbjct: 336 DESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLF 395
Query: 389 NCMTDKSVISWSAMIKGYVKHGQSLIALSLFSRMKSDGIQADFITVINILPAFVHIGVLE 448
+ K VISW+ +I GY AL LF M G + +T+++ILPA H+G ++
Sbjct: 396 ERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAID 455
Query: 449 NVKYLHGYSMK--LGLTSLPSLNTALLITYAKCGCIEMAQRIFEEERIDDKDLIMWNSMI 508
+++H Y K G+T+ SL T+L+ YAKCG IE A ++F I K L WN+MI
Sbjct: 456 IGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNS--ILHKSLSSWNAMI 515
Query: 509 SAHANHGEWSQCFKLYNQMKCSNTKPDQVTFLGLLTACVNSGLVERGKEFFKEMTENYDC 568
A HG F L+++M+ +PD +TF+GLL+AC +SG+++ G+ F+ MT++Y
Sbjct: 516 FGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKM 575
Query: 569 QPSQEHYACMVNLLGRAGLINEAGELVRNMPIKPDARVWGPLLSACKLHPGSKLAEFAAE 628
P EHY CM++LLG +GL EA E++ M ++PD +W LL ACK+H +L E AE
Sbjct: 576 TPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAE 635
Query: 629 KLIDMEPKNAGNYILLSNIYAAAGKWDGVAKMRSFLRDKGLKKTPGCSWLEINGHVTEFR 688
LI +EP+N G+Y+LLSNIYA+AG+W+ VAK R+ L DKG+KK PGCS +EI+ V EF
Sbjct: 636 NLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFI 647
Query: 689 VADQTHPRAEDIYTILGNLELEIKE 709
+ D+ HPR +IY +L +E+ +++
Sbjct: 696 IGDKFHPRNREIYGMLEEMEVLLEK 647
BLAST of HG10021379 vs. ExPASy Swiss-Prot
Match:
O81767 (Pentatricopeptide repeat-containing protein At4g33990 OS=Arabidopsis thaliana OX=3702 GN=EMB2758 PE=3 SV=2)
HSP 1 Score: 411.0 bits (1055), Expect = 2.8e-113
Identity = 231/690 (33.48%), Postives = 387/690 (56.09%), Query Frame = 0
Query: 23 QSRLLNTLSFLFNRCSSRQHLQQIHARFVLHGFHQNPTLSSKLIDCYANLGLLNLSLQVF 82
+S+ ++ + LF C++ Q + +HAR V+ QN +S+KL++ Y LG + L+ F
Sbjct: 50 ESKEIDDVHTLFRYCTNLQSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTF 109
Query: 83 YAIIDPNSTLYNAILRNLTRYGECERTLLVYQQ-MVAKSMHPDEETYPSVLRSCCSFSNV 142
I + + +N ++ R G + + M++ + PD T+PSVL++C V
Sbjct: 110 DHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKAC---RTV 169
Query: 143 GFGRKVHGYLVKLGFDSFDMVATALAEMYEECIDFEHAHQLFDKRSVKDLECWSSLTTET 202
G K+H +K GF VA +L +Y +A LFD+ V+D+ W+++ +
Sbjct: 170 IDGNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGY 229
Query: 203 PQNGNGEGIFRLFGRMRAEQLVPDSLTFINLLRSIAGLNSIRLAKIVHSITIVSKLCGDL 262
Q+GN + L +RA DS+T ++LL + +HS +I L +L
Sbjct: 230 CQSGNAKEALTLSNGLRA----MDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESEL 289
Query: 263 LVNTALLSLYSKLGSLVDARKLFDKMPEKDRVVWNIMIAAYARGGKPTECLELFKSMARS 322
V+ L+ LY++ G L D +K+FD+M +D + WN +I AY +P + LF+ M S
Sbjct: 290 FVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLS 349
Query: 323 GIRSDMFTALPVISSISQLKCVDWGKQTHAHVLRNG-SDSQVSVHNSLIDMYRECNILDS 382
I+ D T + + S +SQL + + LR G +++ N+++ MY + ++DS
Sbjct: 350 RIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDS 409
Query: 383 ACKIFNCMTDKSVISWSAMIKGYVKHGQSLIALSLFSRMKSDG-IQADFITVINILPAFV 442
A +FN + + VISW+ +I GY ++G + A+ +++ M+ +G I A+ T +++LPA
Sbjct: 410 ARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACS 469
Query: 443 HIGVLENVKYLHGYSMKLGLTSLPSLNTALLITYAKCGCIEMAQRIFEEERIDDKDLIMW 502
G L LHG +K GL + T+L Y KCG +E A +F + I + + W
Sbjct: 470 QAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQ--IPRVNSVPW 529
Query: 503 NSMISAHANHGEWSQCFKLYNQMKCSNTKPDQVTFLGLLTACVNSGLVERGKEFFKEMTE 562
N++I+ H HG + L+ +M KPD +TF+ LL+AC +SGLV+ G+ F+ M
Sbjct: 530 NTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQT 589
Query: 563 NYDCQPSQEHYACMVNLLGRAGLINEAGELVRNMPIKPDARVWGPLLSACKLHPGSKLAE 622
+Y PS +HY CMV++ GRAG + A + +++M ++PDA +WG LLSAC++H L +
Sbjct: 590 DYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGNVDLGK 649
Query: 623 FAAEKLIDMEPKNAGNYILLSNIYAAAGKWDGVAKMRSFLRDKGLKKTPGCSWLEINGHV 682
A+E L ++EP++ G ++LLSN+YA+AGKW+GV ++RS KGL+KTPG S +E++ V
Sbjct: 650 IASEHLFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSIAHGKGLRKTPGWSSMEVDNKV 709
Query: 683 TEFRVADQTHPRAEDIYTILGNLELEIKEV 710
F +QTHP E++Y L L+ ++K +
Sbjct: 710 EVFYTGNQTHPMYEEMYRELTALQAKLKMI 730
BLAST of HG10021379 vs. ExPASy Swiss-Prot
Match:
Q9LUJ2 (Pentatricopeptide repeat-containing protein At3g22690 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H56 PE=3 SV=1)
HSP 1 Score: 409.5 bits (1051), Expect = 8.1e-113
Identity = 228/714 (31.93%), Postives = 391/714 (54.76%), Query Frame = 0
Query: 23 QSRLLNTLSFLFNRCSSRQHLQQIHARFVLHGFHQNPTLSSKLIDCYANLGL---LNLSL 82
QS+ C + L+ H G + + +KL+ LG L+ +
Sbjct: 28 QSKCTKATPSSLKNCKTIDELKMFHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAK 87
Query: 83 QVFYAIIDPNST-LYNAILRNLTRYGECERTLLVYQQMVAKSMHPDEETYPSVLRSCCSF 142
+VF + +YN+++R G C +L++ +M+ + PD+ T+P L +C
Sbjct: 88 EVFENSESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKS 147
Query: 143 SNVGFGRKVHGYLVKLGFDSFDMVATALAEMYEECIDFEHAHQLFDKRSVKDLECWSSLT 202
G G ++HG +VK+G+ V +L Y EC + + A ++FD+ S +++ W+S+
Sbjct: 148 RAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMI 207
Query: 203 TETPQNGNGEGIFRLFGRM-RAEQLVPDSLTFINLLRSIAGLNSIRLAKIVHSITIVSKL 262
+ + LF RM R E++ P+S+T + ++ + A L + + V++ S +
Sbjct: 208 CGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGI 267
Query: 263 CGDLLVNTALLSLYSKLGSLVDARKLFDKMPEKDRVVWNIMIAAYARGGKPTECLELFKS 322
+ L+ +AL+ +Y K ++ A++LFD+ + + N M + Y R G E L +F
Sbjct: 268 EVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNL 327
Query: 323 MARSGIRSDMFTALPVISSISQLKCVDWGKQTHAHVLRNGSDSQVSVHNSLIDMYRECNI 382
M SG+R D + L ISS SQL+ + WGK H +VLRNG +S ++ N+LIDMY +C+
Sbjct: 328 MMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHR 387
Query: 383 LDSACKIFNCMTDKSVISWSAMIKGYVKHGQ------------------------SLIAL 442
D+A +IF+ M++K+V++W++++ GYV++G+ L+
Sbjct: 388 QDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQG 447
Query: 443 SLF--------SRMKSDGIQADFITVINILPAFVHIGVLENVKYLHGYSMKLGLTSLPSL 502
SLF S +G+ AD +T+++I A H+G L+ K+++ Y K G+ L
Sbjct: 448 SLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRL 507
Query: 503 NTALLITYAKCGCIEMAQRIFEEERIDDKDLIMWNSMISAHANHGEWSQCFKLYNQMKCS 562
T L+ +++CG E A IF + ++D+ W + I A A G + +L++ M
Sbjct: 508 GTTLVDMFSRCGDPESAMSIFNS--LTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQ 567
Query: 563 NTKPDQVTFLGLLTACVNSGLVERGKEFFKEMTENYDCQPSQEHYACMVNLLGRAGLINE 622
KPD V F+G LTAC + GLV++GKE F M + + P HY CMV+LLGRAGL+ E
Sbjct: 568 GLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEE 627
Query: 623 AGELVRNMPIKPDARVWGPLLSACKLHPGSKLAEFAAEKLIDMEPKNAGNYILLSNIYAA 682
A +L+ +MP++P+ +W LL+AC++ ++A +AAEK+ + P+ G+Y+LLSN+YA+
Sbjct: 628 AVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYAS 687
Query: 683 AGKWDGVAKMRSFLRDKGLKKTPGCSWLEINGHVTEFRVADQTHPRAEDIYTIL 700
AG+W+ +AK+R +++KGL+K PG S ++I G EF D++HP +I +L
Sbjct: 688 AGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIEAML 739
BLAST of HG10021379 vs. ExPASy Swiss-Prot
Match:
Q9SN39 (Pentatricopeptide repeat-containing protein DOT4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=DOT4 PE=2 SV=1)
HSP 1 Score: 409.1 bits (1050), Expect = 1.1e-112
Identity = 225/668 (33.68%), Postives = 370/668 (55.39%), Query Frame = 0
Query: 53 HGFHQNPTLSSKLIDCYANLGLLNLSLQVFYAIIDPNSTLYNAILRNLTRYGECERTLLV 112
+GF + L SKL Y N G L + +VF + + +N ++ L + G+ ++ +
Sbjct: 123 NGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGL 182
Query: 113 YQQMVAKSMHPDEETYPSVLRSCCSFSNVGFGRKVHGYLVKLGFDSFDMVATALAEMYEE 172
+++M++ + D T+ V +S S +V G ++HG+++K GF + V +L Y +
Sbjct: 183 FKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLK 242
Query: 173 CIDFEHAHQLFDKRSVKDLECWSSLTTETPQNGNGEGIFRLFGRMRAEQLVPDSLTFINL 232
+ A ++FD+ + +D+ W+S+ NG E +F +M + D T +++
Sbjct: 243 NQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSV 302
Query: 233 LRSIAGLNSIRLAKIVHSITIVSKLC---GDLLVNTALLSLYSKLGSLVDARKLFDKMPE 292
A I L + VHSI + K C D NT LL +YSK G L A+ +F +M +
Sbjct: 303 FAGCADSRLISLGRAVHSIGV--KACFSREDRFCNT-LLDMYSKCGDLDSAKAVFREMSD 362
Query: 293 KDRVVWNIMIAAYARGGKPTECLELFKSMARSGIRSDMFTALPVISSISQLKCVDWGKQT 352
+ V + MIA YAR G E ++LF+ M GI D++T V++ ++ + +D GK+
Sbjct: 363 RSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRV 422
Query: 353 HAHVLRNGSDSQVSVHNSLIDMYRECNILDSACKIFNCMTDKSVISWSAMIKGYVKHGQS 412
H + N + V N+L+DMY +C + A +F+ M K +ISW+ +I GY K+ +
Sbjct: 423 HEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYA 482
Query: 413 LIALSLFS-RMKSDGIQADFITVINILPAFVHIGVLENVKYLHGYSMKLGLTSLPSLNTA 472
ALSLF+ ++ D TV +LPA + + + +HGY M+ G S + +
Sbjct: 483 NEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANS 542
Query: 473 LLITYAKCGCIEMAQRIFEEERIDDKDLIMWNSMISAHANHGEWSQCFKLYNQMKCSNTK 532
L+ YAKCG + +A +F++ I KDL+ W MI+ + HG + L+NQM+ + +
Sbjct: 543 LVDMYAKCGALLLAHMLFDD--IASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIE 602
Query: 533 PDQVTFLGLLTACVNSGLVERGKEFFKEMTENYDCQPSQEHYACMVNLLGRAGLINEAGE 592
D+++F+ LL AC +SGLV+ G FF M +P+ EHYAC+V++L R G + +A
Sbjct: 603 ADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYR 662
Query: 593 LVRNMPIKPDARVWGPLLSACKLHPGSKLAEFAAEKLIDMEPKNAGNYILLSNIYAAAGK 652
+ NMPI PDA +WG LL C++H KLAE AEK+ ++EP+N G Y+L++NIYA A K
Sbjct: 663 FIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVFELEPENTGYYVLMANIYAEAEK 722
Query: 653 WDGVAKMRSFLRDKGLKKTPGCSWLEINGHVTEFRVADQTHPRAEDIYTILGNLELEIKE 712
W+ V ++R + +GL+K PGCSW+EI G V F D ++P E N+E +++
Sbjct: 723 WEQVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAGDSSNPETE-------NIEAFLRK 778
Query: 713 VREKSIDK 717
VR + I++
Sbjct: 783 VRARMIEE 778
BLAST of HG10021379 vs. ExPASy TrEMBL
Match:
A0A0A0M0Z6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G534720 PE=4 SV=1)
HSP 1 Score: 1305.0 bits (3376), Expect = 0.0e+00
Identity = 648/721 (89.88%), Postives = 681/721 (94.45%), Query Frame = 0
Query: 1 MLHLQRSKPIIQSPIFPNFPATQSRLLNTLSFLFNRCSSRQHLQQIHARFVLHGFHQNPT 60
MLHL RSKPII SPIF NFPATQSRLLNTLS LF+RC+S QHLQQIHARF+LHGFHQNPT
Sbjct: 1 MLHLHRSKPIIHSPIFLNFPATQSRLLNTLSLLFSRCNSIQHLQQIHARFILHGFHQNPT 60
Query: 61 LSSKLIDCYANLGLLNLSLQVFYAIIDPNSTLYNAILRNLTRYGECERTLLVYQQMVAKS 120
LSSKLIDCYANLGLLN SLQVF ++IDPN TL+NAILRNLTRYGE ERTLLVYQQMVAKS
Sbjct: 61 LSSKLIDCYANLGLLNHSLQVFCSVIDPNLTLFNAILRNLTRYGESERTLLVYQQMVAKS 120
Query: 121 MHPDEETYPSVLRSCCSFSNVGFGRKVHGYLVKLGFDSFDMVATALAEMYEECIDFEHAH 180
MHPDEETYP VLRSC SFSNVGFGR +HGYLVKLGFD FD+VATALAEMYEECI+FE+AH
Sbjct: 121 MHPDEETYPFVLRSCSSFSNVGFGRTIHGYLVKLGFDLFDVVATALAEMYEECIEFENAH 180
Query: 181 QLFDKRSVKDLECWSSLTTETPQNGNGEGIFRLFGRMRAEQLVPDSLTFINLLRSIAGLN 240
QLFDKRSVKDL SSLTTE PQN NGEGIFR+FGRM AEQLVPDS TF NLLR IAGLN
Sbjct: 181 QLFDKRSVKDLGWPSSLTTEGPQNDNGEGIFRVFGRMIAEQLVPDSFTFFNLLRFIAGLN 240
Query: 241 SIRLAKIVHSITIVSKLCGDLLVNTALLSLYSKLGSLVDARKLFDKMPEKDRVVWNIMIA 300
SI+LAKIVH I IVSKL GDLLVNTA+LSLYSKL SLVDARKLFDKMPEKDRVVWNIMIA
Sbjct: 241 SIQLAKIVHCIAIVSKLSGDLLVNTAVLSLYSKLRSLVDARKLFDKMPEKDRVVWNIMIA 300
Query: 301 AYARGGKPTECLELFKSMARSGIRSDMFTALPVISSISQLKCVDWGKQTHAHVLRNGSDS 360
AYAR GKPTECLELFKSMARSGIRSD+FTALPVISSI+QLKCVDWGKQTHAH+LRNGSDS
Sbjct: 301 AYAREGKPTECLELFKSMARSGIRSDLFTALPVISSIAQLKCVDWGKQTHAHILRNGSDS 360
Query: 361 QVSVHNSLIDMYRECNILDSACKIFNCMTDKSVISWSAMIKGYVKHGQSLIALSLFSRMK 420
QVSVHNSLIDMY EC ILDSACKIFN MTDKSVISWSAMIKGYVK+GQSL ALSLFS+MK
Sbjct: 361 QVSVHNSLIDMYCECKILDSACKIFNWMTDKSVISWSAMIKGYVKNGQSLTALSLFSKMK 420
Query: 421 SDGIQADFITVINILPAFVHIGVLENVKYLHGYSMKLGLTSLPSLNTALLITYAKCGCIE 480
SDGIQADF+ +INILPAFVHIG LENVKYLHGYSMKLGLTSLPSLNTALLITYAKCG IE
Sbjct: 421 SDGIQADFVIMINILPAFVHIGALENVKYLHGYSMKLGLTSLPSLNTALLITYAKCGSIE 480
Query: 481 MAQRIFEEERIDDKDLIMWNSMISAHANHGEWSQCFKLYNQMKCSNTKPDQVTFLGLLTA 540
MAQR+FEEE+IDDKDLIMWNSMISAHANHG+WSQCFKLYN+MKCSN+KPDQVTFLGLLTA
Sbjct: 481 MAQRLFEEEKIDDKDLIMWNSMISAHANHGDWSQCFKLYNRMKCSNSKPDQVTFLGLLTA 540
Query: 541 CVNSGLVERGKEFFKEMTENYDCQPSQEHYACMVNLLGRAGLINEAGELVRNMPIKPDAR 600
CVNSGLVE+GKEFFKEMTE+Y CQPSQEHYACMVNLLGRAGLI+EAGELV+NMPIKPDAR
Sbjct: 541 CVNSGLVEKGKEFFKEMTESYGCQPSQEHYACMVNLLGRAGLISEAGELVKNMPIKPDAR 600
Query: 601 VWGPLLSACKLHPGSKLAEFAAEKLIDMEPKNAGNYILLSNIYAAAGKWDGVAKMRSFLR 660
VWGPLLSACK+HPGSKLAEFAAEKLI+MEP+NAGNYILLSNIYAAAGKWDGVAKMRSFLR
Sbjct: 601 VWGPLLSACKMHPGSKLAEFAAEKLINMEPRNAGNYILLSNIYAAAGKWDGVAKMRSFLR 660
Query: 661 DKGLKKTPGCSWLEINGHVTEFRVADQTHPRAEDIYTILGNLELEIKEVREKSIDKL-NP 720
+KGLKK PGCSWLEINGHVTEFRVADQTHPRA DIYTILGNLELEIKEVREKS D L NP
Sbjct: 661 NKGLKKIPGCSWLEINGHVTEFRVADQTHPRAGDIYTILGNLELEIKEVREKSPDTLVNP 720
BLAST of HG10021379 vs. ExPASy TrEMBL
Match:
A0A5D3DB69 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold480G00810 PE=4 SV=1)
HSP 1 Score: 1281.5 bits (3315), Expect = 0.0e+00
Identity = 639/721 (88.63%), Postives = 675/721 (93.62%), Query Frame = 0
Query: 1 MLHLQRSKPIIQSPIFPNFPATQSRLLNTLSFLFNRCSSRQHLQQIHARFVLHGFHQNPT 60
MLHLQRSKPII +PI NFPATQSRLLNTLS LFNRC+S QHLQQIHARF+LHGFHQNPT
Sbjct: 1 MLHLQRSKPIIHTPILLNFPATQSRLLNTLSLLFNRCNSIQHLQQIHARFILHGFHQNPT 60
Query: 61 LSSKLIDCYANLGLLNLSLQVFYAIIDPNSTLYNAILRNLTRYGECERTLLVYQQMVAKS 120
LSSKLIDCYANLGLL SLQVF +IIDPN TL+NAILRNLTRYGE ER LLVYQQMVAKS
Sbjct: 61 LSSKLIDCYANLGLLKHSLQVFCSIIDPNLTLFNAILRNLTRYGESERALLVYQQMVAKS 120
Query: 121 MHPDEETYPSVLRSCCSFSNVGFGRKVHGYLVKLGFDSFDMVATALAEMYEECIDFEHAH 180
MHPDEETYP + RSC SFSNVGFGR +HGYLVKLGFDSFD+VATALAEMYE+ I FE+AH
Sbjct: 121 MHPDEETYPFIFRSCSSFSNVGFGRTIHGYLVKLGFDSFDVVATALAEMYEKWIAFENAH 180
Query: 181 QLFDKRSVKDLECWSSLTTETPQNGNGEGIFRLFGRMRAEQLVPDSLTFINLLRSIAGLN 240
QLFDKRSVKDL SSLTTE QNGNGEGIFR+F RMRAEQLVPDSLTF+NLLR IAGLN
Sbjct: 181 QLFDKRSVKDLGWSSSLTTEGSQNGNGEGIFRVFVRMRAEQLVPDSLTFVNLLRFIAGLN 240
Query: 241 SIRLAKIVHSITIVSKLCGDLLVNTALLSLYSKLGSLVDARKLFDKMPEKDRVVWNIMIA 300
SI+LAKIVH I IVSKL GDLLV TA+LSLYSKL SLVDAR+LFDKMPEKDRVVWNIMIA
Sbjct: 241 SIQLAKIVHCIAIVSKLSGDLLVYTAVLSLYSKLRSLVDARRLFDKMPEKDRVVWNIMIA 300
Query: 301 AYARGGKPTECLELFKSMARSGIRSDMFTALPVISSISQLKCVDWGKQTHAHVLRNGSDS 360
AYAR GKP ECLELFKSMARSGIRSD+FTALPVISSI+QLKCVDWGKQTHAH+LRNGSDS
Sbjct: 301 AYAREGKPRECLELFKSMARSGIRSDLFTALPVISSIAQLKCVDWGKQTHAHILRNGSDS 360
Query: 361 QVSVHNSLIDMYRECNILDSACKIFNCMTDKSVISWSAMIKGYVKHGQSLIALSLFSRMK 420
QVSVHNSLIDMY EC +LDSAC IFN MTDKSVISWSAMIKGYVK+GQSL A SLFS+MK
Sbjct: 361 QVSVHNSLIDMYCECKMLDSACNIFNWMTDKSVISWSAMIKGYVKNGQSLTASSLFSKMK 420
Query: 421 SDGIQADFITVINILPAFVHIGVLENVKYLHGYSMKLGLTSLPSLNTALLITYAKCGCIE 480
SDGIQADF+T+INILPAFVHIG LENVKYLHGYSMKLGLTSLPSLNTALLITYAKCG IE
Sbjct: 421 SDGIQADFVTMINILPAFVHIGALENVKYLHGYSMKLGLTSLPSLNTALLITYAKCGYIE 480
Query: 481 MAQRIFEEERIDDKDLIMWNSMISAHANHGEWSQCFKLYNQMKCSNTKPDQVTFLGLLTA 540
MAQR+FEEERIDDKDLIMWNSMISAHANHG+WSQCFKLYN+MKCSN+KPDQVTFLGLLTA
Sbjct: 481 MAQRLFEEERIDDKDLIMWNSMISAHANHGDWSQCFKLYNRMKCSNSKPDQVTFLGLLTA 540
Query: 541 CVNSGLVERGKEFFKEMTENYDCQPSQEHYACMVNLLGRAGLINEAGELVRNMPIKPDAR 600
CVNSGL+E+GKEFFKEMTE+Y C PSQEH+ACMVNLLGRAGLI+EAGELVRNMPIKPDAR
Sbjct: 541 CVNSGLIEKGKEFFKEMTESYGCLPSQEHFACMVNLLGRAGLISEAGELVRNMPIKPDAR 600
Query: 601 VWGPLLSACKLHPGSKLAEFAAEKLIDMEPKNAGNYILLSNIYAAAGKWDGVAKMRSFLR 660
VWGPLLSACK+HPGSKLAEFAAEKLIDMEPKNAGNYILLSNIYAAAGKW+ VAKMRSFLR
Sbjct: 601 VWGPLLSACKMHPGSKLAEFAAEKLIDMEPKNAGNYILLSNIYAAAGKWEEVAKMRSFLR 660
Query: 661 DKGLKKTPGCSWLEINGHVTEFRVADQTHPRAEDIYTILGNLELEIKEVREKSIDKL-NP 720
+KGLKKTPGCS LEING VTEFRVADQTHPRAEDIYTILGNLELEIKEVREKS+D L NP
Sbjct: 661 NKGLKKTPGCSSLEINGRVTEFRVADQTHPRAEDIYTILGNLELEIKEVREKSLDTLVNP 720
BLAST of HG10021379 vs. ExPASy TrEMBL
Match:
A0A1S3BBG7 (pentatricopeptide repeat-containing protein At1g11290, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC103487849 PE=4 SV=1)
HSP 1 Score: 1281.5 bits (3315), Expect = 0.0e+00
Identity = 639/721 (88.63%), Postives = 675/721 (93.62%), Query Frame = 0
Query: 1 MLHLQRSKPIIQSPIFPNFPATQSRLLNTLSFLFNRCSSRQHLQQIHARFVLHGFHQNPT 60
MLHLQRSKPII +PI NFPATQSRLLNTLS LFNRC+S QHLQQIHARF+LHGFHQNPT
Sbjct: 1 MLHLQRSKPIIHTPILLNFPATQSRLLNTLSLLFNRCNSIQHLQQIHARFILHGFHQNPT 60
Query: 61 LSSKLIDCYANLGLLNLSLQVFYAIIDPNSTLYNAILRNLTRYGECERTLLVYQQMVAKS 120
LSSKLIDCYANLGLL SLQVF +IIDPN TL+NAILRNLTRYGE ER LLVYQQMVAKS
Sbjct: 61 LSSKLIDCYANLGLLKHSLQVFCSIIDPNLTLFNAILRNLTRYGESERALLVYQQMVAKS 120
Query: 121 MHPDEETYPSVLRSCCSFSNVGFGRKVHGYLVKLGFDSFDMVATALAEMYEECIDFEHAH 180
MHPDEETYP + RSC SFSNVGFGR +HGYLVKLGFDSFD+VATALAEMYE+ I FE+AH
Sbjct: 121 MHPDEETYPFIFRSCSSFSNVGFGRTIHGYLVKLGFDSFDVVATALAEMYEKWIAFENAH 180
Query: 181 QLFDKRSVKDLECWSSLTTETPQNGNGEGIFRLFGRMRAEQLVPDSLTFINLLRSIAGLN 240
QLFDKRSVKDL SSLTTE QNGNGEGIFR+F RMRAEQLVPDSLTF+NLLR IAGLN
Sbjct: 181 QLFDKRSVKDLGWSSSLTTEGSQNGNGEGIFRVFVRMRAEQLVPDSLTFVNLLRFIAGLN 240
Query: 241 SIRLAKIVHSITIVSKLCGDLLVNTALLSLYSKLGSLVDARKLFDKMPEKDRVVWNIMIA 300
SI+LAKIVH I IVSKL GDLLV TA+LSLYSKL SLVDAR+LFDKMPEKDRVVWNIMIA
Sbjct: 241 SIQLAKIVHCIAIVSKLSGDLLVYTAVLSLYSKLRSLVDARRLFDKMPEKDRVVWNIMIA 300
Query: 301 AYARGGKPTECLELFKSMARSGIRSDMFTALPVISSISQLKCVDWGKQTHAHVLRNGSDS 360
AYAR GKP ECLELFKSMARSGIRSD+FTALPVISSI+QLKCVDWGKQTHAH+LRNGSDS
Sbjct: 301 AYAREGKPRECLELFKSMARSGIRSDLFTALPVISSIAQLKCVDWGKQTHAHILRNGSDS 360
Query: 361 QVSVHNSLIDMYRECNILDSACKIFNCMTDKSVISWSAMIKGYVKHGQSLIALSLFSRMK 420
QVSVHNSLIDMY EC +LDSAC IFN MTDKSVISWSAMIKGYVK+GQSL A SLFS+MK
Sbjct: 361 QVSVHNSLIDMYCECKMLDSACNIFNWMTDKSVISWSAMIKGYVKNGQSLTASSLFSKMK 420
Query: 421 SDGIQADFITVINILPAFVHIGVLENVKYLHGYSMKLGLTSLPSLNTALLITYAKCGCIE 480
SDGIQADF+T+INILPAFVHIG LENVKYLHGYSMKLGLTSLPSLNTALLITYAKCG IE
Sbjct: 421 SDGIQADFVTMINILPAFVHIGALENVKYLHGYSMKLGLTSLPSLNTALLITYAKCGYIE 480
Query: 481 MAQRIFEEERIDDKDLIMWNSMISAHANHGEWSQCFKLYNQMKCSNTKPDQVTFLGLLTA 540
MAQR+FEEERIDDKDLIMWNSMISAHANHG+WSQCFKLYN+MKCSN+KPDQVTFLGLLTA
Sbjct: 481 MAQRLFEEERIDDKDLIMWNSMISAHANHGDWSQCFKLYNRMKCSNSKPDQVTFLGLLTA 540
Query: 541 CVNSGLVERGKEFFKEMTENYDCQPSQEHYACMVNLLGRAGLINEAGELVRNMPIKPDAR 600
CVNSGL+E+GKEFFKEMTE+Y C PSQEH+ACMVNLLGRAGLI+EAGELVRNMPIKPDAR
Sbjct: 541 CVNSGLIEKGKEFFKEMTESYGCLPSQEHFACMVNLLGRAGLISEAGELVRNMPIKPDAR 600
Query: 601 VWGPLLSACKLHPGSKLAEFAAEKLIDMEPKNAGNYILLSNIYAAAGKWDGVAKMRSFLR 660
VWGPLLSACK+HPGSKLAEFAAEKLIDMEPKNAGNYILLSNIYAAAGKW+ VAKMRSFLR
Sbjct: 601 VWGPLLSACKMHPGSKLAEFAAEKLIDMEPKNAGNYILLSNIYAAAGKWEEVAKMRSFLR 660
Query: 661 DKGLKKTPGCSWLEINGHVTEFRVADQTHPRAEDIYTILGNLELEIKEVREKSIDKL-NP 720
+KGLKKTPGCS LEING VTEFRVADQTHPRAEDIYTILGNLELEIKEVREKS+D L NP
Sbjct: 661 NKGLKKTPGCSSLEINGRVTEFRVADQTHPRAEDIYTILGNLELEIKEVREKSLDTLVNP 720
BLAST of HG10021379 vs. ExPASy TrEMBL
Match:
A0A6J1CE61 (pentatricopeptide repeat-containing protein At1g11290, chloroplastic-like OS=Momordica charantia OX=3673 GN=LOC111010677 PE=4 SV=1)
HSP 1 Score: 1248.8 bits (3230), Expect = 0.0e+00
Identity = 615/720 (85.42%), Postives = 657/720 (91.25%), Query Frame = 0
Query: 1 MLHLQRSKPIIQSPIFPNFPATQSRLLNTLSFLFNRCSSRQHLQQIHARFVLHGFHQNPT 60
MLHLQRSKPI + F NFPATQSR LNTLSFLF+RCSSRQ L+QIHARF+LHG HQNP
Sbjct: 1 MLHLQRSKPIFRFE-FSNFPATQSRPLNTLSFLFSRCSSRQQLEQIHARFILHGLHQNPA 60
Query: 61 LSSKLIDCYANLGLLNLSLQVFYAIIDPNSTLYNAILRNLTRYGECERTLLVYQQMVAKS 120
LS +LID YANLGLL LS QVF +IIDP STLY+AILRNL+ +GE ERTLLVY++M AKS
Sbjct: 61 LSCELIDSYANLGLLTLSQQVFNSIIDPTSTLYSAILRNLSSFGEYERTLLVYREMFAKS 120
Query: 121 MHPDEETYPSVLRSCCSFSNVGFGRKVHGYLVKLGFDSFDMVATALAEMYEECIDFEHAH 180
MHPDEETYPSVLRSCC SNV +GRK+HG+LVKLG D +D ATALAEMY +CI FE+ H
Sbjct: 121 MHPDEETYPSVLRSCCCLSNVEYGRKIHGHLVKLGVDLYDSTATALAEMYRKCIGFENGH 180
Query: 181 QLFDKRSVKDLECWSSLTTETPQNGNGEGIFRLFGRMRAEQLVPDSLTFINLLRSIAGLN 240
LFDK +KD ECW+SL +E QNGNG+ IF+LFGRMR EQLV DSLTFINLLRSI GLN
Sbjct: 181 DLFDKMPMKDFECWNSLNSEASQNGNGDEIFQLFGRMRTEQLVSDSLTFINLLRSIVGLN 240
Query: 241 SIRLAKIVHSITIVSKLCGDLLVNTALLSLYSKLGSLVDARKLFDKMPEKDRVVWNIMIA 300
SI+LAKIVH + I S LCGDLLVNTA+LSLYSKLG LV+ARKLFDKMPEKDRVVWNIMIA
Sbjct: 241 SIQLAKIVHCVAITSNLCGDLLVNTAVLSLYSKLGCLVNARKLFDKMPEKDRVVWNIMIA 300
Query: 301 AYARGGKPTECLELFKSMARSGIRSDMFTALPVISSISQLKCVDWGKQTHAHVLRNGSDS 360
AY R G P ECLELFKSMARSGIR+D+FTALPVISSISQLKCVDWGKQTHAH LRNGSD+
Sbjct: 301 AYDREGNPAECLELFKSMARSGIRADLFTALPVISSISQLKCVDWGKQTHAHTLRNGSDN 360
Query: 361 QVSVHNSLIDMYRECNILDSACKIFNCMTDKSVISWSAMIKGYVKHGQSLIALSLFSRMK 420
QVSVHNSLIDMY E NILDSACKIF+ MT+K+VISWSAMIKG VKHGQSL ALSLFSRMK
Sbjct: 361 QVSVHNSLIDMYCELNILDSACKIFSWMTNKTVISWSAMIKGCVKHGQSLNALSLFSRMK 420
Query: 421 SDGIQADFITVINILPAFVHIGVLENVKYLHGYSMKLGLTSLPSLNTALLITYAKCGCIE 480
SDGIQADFITVINILPAFVHIG LENVKYLHGYSMKLGLTSLPSLNTALLITYAKCGCIE
Sbjct: 421 SDGIQADFITVINILPAFVHIGALENVKYLHGYSMKLGLTSLPSLNTALLITYAKCGCIE 480
Query: 481 MAQRIFEEERIDDKDLIMWNSMISAHANHGEWSQCFKLYNQMKCSNTKPDQVTFLGLLTA 540
MAQR+FEEER+DDKDLIMWNSMISAHANHG+WSQCFK+YNQMKCSN++PDQVTFLGLLTA
Sbjct: 481 MAQRLFEEERVDDKDLIMWNSMISAHANHGDWSQCFKIYNQMKCSNSRPDQVTFLGLLTA 540
Query: 541 CVNSGLVERGKEFFKEMTENYDCQPSQEHYACMVNLLGRAGLINEAGELVRNMPIKPDAR 600
CVNSGLVE+GKE FKEM ENY CQPSQEHYACMVNLLGRAGLIN+AG LVRNMPIKPDAR
Sbjct: 541 CVNSGLVEKGKECFKEMIENYGCQPSQEHYACMVNLLGRAGLINDAGALVRNMPIKPDAR 600
Query: 601 VWGPLLSACKLHPGSKLAEFAAEKLIDMEPKNAGNYILLSNIYAAAGKWDGVAKMRSFLR 660
VWGPLLSACKLHPGSKLAEFAAEKLIDMEPKNAGNYILLSNIYAAAGKWDGVAKMRSFLR
Sbjct: 601 VWGPLLSACKLHPGSKLAEFAAEKLIDMEPKNAGNYILLSNIYAAAGKWDGVAKMRSFLR 660
Query: 661 DKGLKKTPGCSWLEINGHVTEFRVADQTHPRAEDIYTILGNLELEIKEVREKSIDKLNPL 720
DKGLKKTPGCSWLEINGHVTEFRVAD+THPRAEDIYTILGNLELEIKE REKS +KL L
Sbjct: 661 DKGLKKTPGCSWLEINGHVTEFRVADRTHPRAEDIYTILGNLELEIKEAREKSPEKLGIL 719
BLAST of HG10021379 vs. ExPASy TrEMBL
Match:
A0A6J1K3Q8 (pentatricopeptide repeat-containing protein At1g11290, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111490383 PE=4 SV=1)
HSP 1 Score: 1243.8 bits (3217), Expect = 0.0e+00
Identity = 611/724 (84.39%), Postives = 660/724 (91.16%), Query Frame = 0
Query: 1 MLHLQRSKPIIQSPI----FPNFPATQSRLLNTLSFLFNRCSSRQHLQQIHARFVLHGFH 60
M HLQRSK I QSPI FPNFPATQSRLLNTLS LF+RC SRQ L+QIHARFVLHGFH
Sbjct: 1 MFHLQRSKSITQSPIFRFKFPNFPATQSRLLNTLSSLFSRCKSRQQLEQIHARFVLHGFH 60
Query: 61 QNPTLSSKLIDCYANLGLLNLSLQVFYAIIDPNSTLYNAILRNLTRYGECERTLLVYQQM 120
QNPTLS KLIDCYAN GLLN+S VF +IIDPNSTLYNAILRNLTR+GE ERTLLVY++M
Sbjct: 61 QNPTLSCKLIDCYANFGLLNVSHHVFNSIIDPNSTLYNAILRNLTRFGEYERTLLVYREM 120
Query: 121 VAKSMHPDEETYPSVLRSCCSFSNVGFGRKVHGYLVKLGFDSFDMVATALAEMYEECIDF 180
VAKSMHPDE+TYP VL+SCC SNV FG+ +HG L+KLG DS+D V T LAEMY +CIDF
Sbjct: 121 VAKSMHPDEQTYPFVLQSCCCLSNVEFGKNIHGCLIKLGVDSYDTVVTVLAEMYGKCIDF 180
Query: 181 EHAHQLFDKRSVKDLECWSSLTTETPQNGNGEGIFRLFGRMRAEQLVPDSLTFINLLRSI 240
E+AHQLFDK SVKDL+CWSSL +E PQNGNG+ I L GRM++E LV DSLTFINLLRSI
Sbjct: 181 ENAHQLFDKMSVKDLDCWSSLISEAPQNGNGDEISLLLGRMKSEPLVTDSLTFINLLRSI 240
Query: 241 AGLNSIRLAKIVHSITIVSKLCGDLLVNTALLSLYSKLGSLVDARKLFDKMPEKDRVVWN 300
+GL+SI+LAKIVH I IVS LCGDLLV+TA+LSLYSKLGSLVDARKLF+KMPEKDRVVWN
Sbjct: 241 SGLSSIQLAKIVHCIAIVSNLCGDLLVDTAVLSLYSKLGSLVDARKLFEKMPEKDRVVWN 300
Query: 301 IMIAAYARGGKPTECLELFKSMARSGIRSDMFTALPVISSISQLKCVDWGKQTHAHVLRN 360
IMIAAYAR G+P ECLELF+SMARSGIR+D+FTALPVISSISQLKC DWGKQTHA++LRN
Sbjct: 301 IMIAAYAREGRPMECLELFESMARSGIRADLFTALPVISSISQLKCADWGKQTHANILRN 360
Query: 361 GSDSQVSVHNSLIDMYRECNILDSACKIFNCMTDKSVISWSAMIKGYVKHGQSLIALSLF 420
GSDSQVSVHNSLIDMY ECN L+SACKIFN +T+K+VISWSAMIKG VKHG LIALSLF
Sbjct: 361 GSDSQVSVHNSLIDMYCECNSLESACKIFNSVTNKTVISWSAMIKGNVKHGYPLIALSLF 420
Query: 421 SRMKSDGIQADFITVINILPAFVHIGVLENVKYLHGYSMKLGLTSLPSLNTALLITYAKC 480
MKSDGIQADFITVINI+PAFV IG LENVKYLHGYS+KL LTSLPSLNTALLITYAKC
Sbjct: 421 FMMKSDGIQADFITVINIMPAFVDIGALENVKYLHGYSLKLALTSLPSLNTALLITYAKC 480
Query: 481 GCIEMAQRIFEEERIDDKDLIMWNSMISAHANHGEWSQCFKLYNQMKCSNTKPDQVTFLG 540
GCIEMAQR+FEEER++DKDLIMWNSMISAHANHG+WSQCFKLYNQMKCSN+ PDQVTFLG
Sbjct: 481 GCIEMAQRLFEEERVNDKDLIMWNSMISAHANHGDWSQCFKLYNQMKCSNSNPDQVTFLG 540
Query: 541 LLTACVNSGLVERGKEFFKEMTENYDCQPSQEHYACMVNLLGRAGLINEAGELVRNMPIK 600
LLTACVNSGLVE+GKEFFKEM E+Y CQPSQEHYACMVNLLGRAGLINEAGELVRNMPIK
Sbjct: 541 LLTACVNSGLVEKGKEFFKEMIESYSCQPSQEHYACMVNLLGRAGLINEAGELVRNMPIK 600
Query: 601 PDARVWGPLLSACKLHPGSKLAEFAAEKLIDMEPKNAGNYILLSNIYAAAGKWDGVAKMR 660
PDARVWGPLLSACKLHPGSKLAEFAAEKLIDMEPKNAGNYILLSNIYAAAGKWDGVAKMR
Sbjct: 601 PDARVWGPLLSACKLHPGSKLAEFAAEKLIDMEPKNAGNYILLSNIYAAAGKWDGVAKMR 660
Query: 661 SFLRDKGLKKTPGCSWLEINGHVTEFRVADQTHPRAEDIYTILGNLELEIKEVREKSIDK 720
SFLRDKGLKKTPGCSWLEING V EFRVAD+THPRAEDIY ILGNLEL+IKE +E S +K
Sbjct: 661 SFLRDKGLKKTPGCSWLEINGRVAEFRVADRTHPRAEDIYAILGNLELDIKEAKEMSPEK 720
BLAST of HG10021379 vs. TAIR 10
Match:
AT1G11290.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 436.4 bits (1121), Expect = 4.4e-122
Identity = 236/718 (32.87%), Postives = 391/718 (54.46%), Query Frame = 0
Query: 7 SKPIIQSPIFPNFPATQSRLLNTLS---------------FLFNRCSSRQHLQQIHARFV 66
S ++Q P P SR + LS L RCSS + L+QI
Sbjct: 2 SSQLVQFSTVPQIPNPPSRHRHFLSERNYIPANVYEHPAALLLERCSSLKELRQILPLVF 61
Query: 67 LHGFHQNPTLSSKLIDCYANLGLLNLSLQVFYAIIDPNSTLYNAILRNLTRYGECERTLL 126
+G +Q +KL+ + G ++ + +VF I + LY+ +L+ + + ++ L
Sbjct: 62 KNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQ 121
Query: 127 VYQQMVAKSMHPDEETYPSVLRSCCSFSNVGFGRKVHGYLVKLGFDSFDMVA-TALAEMY 186
+ +M + P + +L+ C + + G+++HG LVK GF S D+ A T L MY
Sbjct: 122 FFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGF-SLDLFAMTGLENMY 181
Query: 187 EECIDFEHAHQLFDKRSVKDLECWSSLTTETPQNGNGEGIFRLFGRMRAEQLVPDSLTFI 246
+C A ++FD+ +DL W+++ QNG + M E L P +T +
Sbjct: 182 AKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIV 241
Query: 247 NLLRSIAGLNSIRLAKIVHSITIVSKLCGDLLVNTALLSLYSKLGSLVDARKLFDKMPEK 306
++L +++ L I + K +H + S + ++TAL+ +Y+K GSL AR+LFD M E+
Sbjct: 242 SVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLER 301
Query: 307 DRVVWNIMIAAYARGGKPTECLELFKSMARSGIRSDMFTALPVISSISQLKCVDWGKQTH 366
+ V WN MI AY + P E + +F+ M G++ + + + + + L ++ G+ H
Sbjct: 302 NVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIH 361
Query: 367 AHVLRNGSDSQVSVHNSLIDMYRECNILDSACKIFNCMTDKSVISWSAMIKGYVKHGQSL 426
+ G D VSV NSLI MY +C +D+A +F + ++++SW+AMI G+ ++G+ +
Sbjct: 362 KLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPI 421
Query: 427 IALSLFSRMKSDGIQADFITVINILPAFVHIGVLENVKYLHGYSMKLGLTSLPSLNTALL 486
AL+ FS+M+S ++ D T ++++ A + + + K++HG M+ L + TAL+
Sbjct: 422 DALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALV 481
Query: 487 ITYAKCGCIEMAQRIFEEERIDDKDLIMWNSMISAHANHGEWSQCFKLYNQMKCSNTKPD 546
YAKCG I +A+ IF + + ++ + WN+MI + HG +L+ +M+ KP+
Sbjct: 482 DMYAKCGAIMIARLIF--DMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPN 541
Query: 547 QVTFLGLLTACVNSGLVERGKEFFKEMTENYDCQPSQEHYACMVNLLGRAGLINEAGELV 606
VTFL +++AC +SGLVE G + F M ENY + S +HY MV+LLGRAG +NEA + +
Sbjct: 542 GVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFI 601
Query: 607 RNMPIKPDARVWGPLLSACKLHPGSKLAEFAAEKLIDMEPKNAGNYILLSNIYAAAGKWD 666
MP+KP V+G +L AC++H AE AAE+L ++ P + G ++LL+NIY AA W+
Sbjct: 602 MQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANIYRAASMWE 661
Query: 667 GVAKMRSFLRDKGLKKTPGCSWLEINGHVTEFRVADQTHPRAEDIYTILGNLELEIKE 709
V ++R + +GL+KTPGCS +EI V F HP ++ IY L L IKE
Sbjct: 662 KVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGSTAHPDSKKIYAFLEKLICHIKE 716
BLAST of HG10021379 vs. TAIR 10
Match:
AT1G08070.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 428.7 bits (1101), Expect = 9.2e-120
Identity = 243/685 (35.47%), Postives = 372/685 (54.31%), Query Frame = 0
Query: 29 TLSFLFNRCSSRQHLQQIHARFVLHGFHQNPTLSSKLID-CYANLGL--LNLSLQVFYAI 88
+LS L N C + Q L+ IHA+ + G H SKLI+ C + L ++ VF I
Sbjct: 36 SLSLLHN-CKTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTI 95
Query: 89 IDPNSTLYNAILRNLTRYGECERTLLVYQQMVAKSMHPDEETYPSVLRSCCSFSNVGFGR 148
+PN ++N + R + L +Y M++ + P+ T+P VL+SC G+
Sbjct: 96 QEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQ 155
Query: 149 KVHGYLVKLGFDSFDMVATALAEMYEECIDFEHAHQLFDKRSVKDLECWSSLTTETPQNG 208
++HG+++KLG D V T+L MY + E AH++FDK +D+ +
Sbjct: 156 QIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSY----------- 215
Query: 209 NGEGIFRLFGRMRAEQLVPDSLTFINLLRSIAGLNSIRLAKIVHSITIVSKLCGDLLVNT 268
T
Sbjct: 216 -----------------------------------------------------------T 275
Query: 269 ALLSLYSKLGSLVDARKLFDKMPEKDRVVWNIMIAAYARGGKPTECLELFKSMARSGIRS 328
AL+ Y+ G + +A+KLFD++P KD V WN MI+ YA G E LELFK M ++ +R
Sbjct: 276 ALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRP 335
Query: 329 DMFTALPVISSISQLKCVDWGKQTHAHVLRNGSDSQVSVHNSLIDMYRECNILDSACKIF 388
D T + V+S+ +Q ++ G+Q H + +G S + + N+LID+Y +C L++AC +F
Sbjct: 336 DESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLF 395
Query: 389 NCMTDKSVISWSAMIKGYVKHGQSLIALSLFSRMKSDGIQADFITVINILPAFVHIGVLE 448
+ K VISW+ +I GY AL LF M G + +T+++ILPA H+G ++
Sbjct: 396 ERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAID 455
Query: 449 NVKYLHGYSMK--LGLTSLPSLNTALLITYAKCGCIEMAQRIFEEERIDDKDLIMWNSMI 508
+++H Y K G+T+ SL T+L+ YAKCG IE A ++F I K L WN+MI
Sbjct: 456 IGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNS--ILHKSLSSWNAMI 515
Query: 509 SAHANHGEWSQCFKLYNQMKCSNTKPDQVTFLGLLTACVNSGLVERGKEFFKEMTENYDC 568
A HG F L+++M+ +PD +TF+GLL+AC +SG+++ G+ F+ MT++Y
Sbjct: 516 FGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKM 575
Query: 569 QPSQEHYACMVNLLGRAGLINEAGELVRNMPIKPDARVWGPLLSACKLHPGSKLAEFAAE 628
P EHY CM++LLG +GL EA E++ M ++PD +W LL ACK+H +L E AE
Sbjct: 576 TPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAE 635
Query: 629 KLIDMEPKNAGNYILLSNIYAAAGKWDGVAKMRSFLRDKGLKKTPGCSWLEINGHVTEFR 688
LI +EP+N G+Y+LLSNIYA+AG+W+ VAK R+ L DKG+KK PGCS +EI+ V EF
Sbjct: 636 NLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFI 647
Query: 689 VADQTHPRAEDIYTILGNLELEIKE 709
+ D+ HPR +IY +L +E+ +++
Sbjct: 696 IGDKFHPRNREIYGMLEEMEVLLEK 647
BLAST of HG10021379 vs. TAIR 10
Match:
AT4G33990.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 411.0 bits (1055), Expect = 2.0e-114
Identity = 231/690 (33.48%), Postives = 387/690 (56.09%), Query Frame = 0
Query: 23 QSRLLNTLSFLFNRCSSRQHLQQIHARFVLHGFHQNPTLSSKLIDCYANLGLLNLSLQVF 82
+S+ ++ + LF C++ Q + +HAR V+ QN +S+KL++ Y LG + L+ F
Sbjct: 50 ESKEIDDVHTLFRYCTNLQSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTF 109
Query: 83 YAIIDPNSTLYNAILRNLTRYGECERTLLVYQQ-MVAKSMHPDEETYPSVLRSCCSFSNV 142
I + + +N ++ R G + + M++ + PD T+PSVL++C V
Sbjct: 110 DHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKAC---RTV 169
Query: 143 GFGRKVHGYLVKLGFDSFDMVATALAEMYEECIDFEHAHQLFDKRSVKDLECWSSLTTET 202
G K+H +K GF VA +L +Y +A LFD+ V+D+ W+++ +
Sbjct: 170 IDGNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGY 229
Query: 203 PQNGNGEGIFRLFGRMRAEQLVPDSLTFINLLRSIAGLNSIRLAKIVHSITIVSKLCGDL 262
Q+GN + L +RA DS+T ++LL + +HS +I L +L
Sbjct: 230 CQSGNAKEALTLSNGLRA----MDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESEL 289
Query: 263 LVNTALLSLYSKLGSLVDARKLFDKMPEKDRVVWNIMIAAYARGGKPTECLELFKSMARS 322
V+ L+ LY++ G L D +K+FD+M +D + WN +I AY +P + LF+ M S
Sbjct: 290 FVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLS 349
Query: 323 GIRSDMFTALPVISSISQLKCVDWGKQTHAHVLRNG-SDSQVSVHNSLIDMYRECNILDS 382
I+ D T + + S +SQL + + LR G +++ N+++ MY + ++DS
Sbjct: 350 RIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDS 409
Query: 383 ACKIFNCMTDKSVISWSAMIKGYVKHGQSLIALSLFSRMKSDG-IQADFITVINILPAFV 442
A +FN + + VISW+ +I GY ++G + A+ +++ M+ +G I A+ T +++LPA
Sbjct: 410 ARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACS 469
Query: 443 HIGVLENVKYLHGYSMKLGLTSLPSLNTALLITYAKCGCIEMAQRIFEEERIDDKDLIMW 502
G L LHG +K GL + T+L Y KCG +E A +F + I + + W
Sbjct: 470 QAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQ--IPRVNSVPW 529
Query: 503 NSMISAHANHGEWSQCFKLYNQMKCSNTKPDQVTFLGLLTACVNSGLVERGKEFFKEMTE 562
N++I+ H HG + L+ +M KPD +TF+ LL+AC +SGLV+ G+ F+ M
Sbjct: 530 NTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQT 589
Query: 563 NYDCQPSQEHYACMVNLLGRAGLINEAGELVRNMPIKPDARVWGPLLSACKLHPGSKLAE 622
+Y PS +HY CMV++ GRAG + A + +++M ++PDA +WG LLSAC++H L +
Sbjct: 590 DYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGNVDLGK 649
Query: 623 FAAEKLIDMEPKNAGNYILLSNIYAAAGKWDGVAKMRSFLRDKGLKKTPGCSWLEINGHV 682
A+E L ++EP++ G ++LLSN+YA+AGKW+GV ++RS KGL+KTPG S +E++ V
Sbjct: 650 IASEHLFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSIAHGKGLRKTPGWSSMEVDNKV 709
Query: 683 TEFRVADQTHPRAEDIYTILGNLELEIKEV 710
F +QTHP E++Y L L+ ++K +
Sbjct: 710 EVFYTGNQTHPMYEEMYRELTALQAKLKMI 730
BLAST of HG10021379 vs. TAIR 10
Match:
AT3G22690.1 (CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1685 (InterPro:IPR012881), Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT2G29760.1); Has 49784 Blast hits to 14716 proteins in 280 species: Archae - 2; Bacteria - 10; Metazoa - 107; Fungi - 167; Plants - 48594; Viruses - 0; Other Eukaryotes - 904 (source: NCBI BLink). )
HSP 1 Score: 409.5 bits (1051), Expect = 5.8e-114
Identity = 228/714 (31.93%), Postives = 391/714 (54.76%), Query Frame = 0
Query: 23 QSRLLNTLSFLFNRCSSRQHLQQIHARFVLHGFHQNPTLSSKLIDCYANLGL---LNLSL 82
QS+ C + L+ H G + + +KL+ LG L+ +
Sbjct: 28 QSKCTKATPSSLKNCKTIDELKMFHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAK 87
Query: 83 QVFYAIIDPNST-LYNAILRNLTRYGECERTLLVYQQMVAKSMHPDEETYPSVLRSCCSF 142
+VF + +YN+++R G C +L++ +M+ + PD+ T+P L +C
Sbjct: 88 EVFENSESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKS 147
Query: 143 SNVGFGRKVHGYLVKLGFDSFDMVATALAEMYEECIDFEHAHQLFDKRSVKDLECWSSLT 202
G G ++HG +VK+G+ V +L Y EC + + A ++FD+ S +++ W+S+
Sbjct: 148 RAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMI 207
Query: 203 TETPQNGNGEGIFRLFGRM-RAEQLVPDSLTFINLLRSIAGLNSIRLAKIVHSITIVSKL 262
+ + LF RM R E++ P+S+T + ++ + A L + + V++ S +
Sbjct: 208 CGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGI 267
Query: 263 CGDLLVNTALLSLYSKLGSLVDARKLFDKMPEKDRVVWNIMIAAYARGGKPTECLELFKS 322
+ L+ +AL+ +Y K ++ A++LFD+ + + N M + Y R G E L +F
Sbjct: 268 EVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNL 327
Query: 323 MARSGIRSDMFTALPVISSISQLKCVDWGKQTHAHVLRNGSDSQVSVHNSLIDMYRECNI 382
M SG+R D + L ISS SQL+ + WGK H +VLRNG +S ++ N+LIDMY +C+
Sbjct: 328 MMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHR 387
Query: 383 LDSACKIFNCMTDKSVISWSAMIKGYVKHGQ------------------------SLIAL 442
D+A +IF+ M++K+V++W++++ GYV++G+ L+
Sbjct: 388 QDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQG 447
Query: 443 SLF--------SRMKSDGIQADFITVINILPAFVHIGVLENVKYLHGYSMKLGLTSLPSL 502
SLF S +G+ AD +T+++I A H+G L+ K+++ Y K G+ L
Sbjct: 448 SLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRL 507
Query: 503 NTALLITYAKCGCIEMAQRIFEEERIDDKDLIMWNSMISAHANHGEWSQCFKLYNQMKCS 562
T L+ +++CG E A IF + ++D+ W + I A A G + +L++ M
Sbjct: 508 GTTLVDMFSRCGDPESAMSIFNS--LTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQ 567
Query: 563 NTKPDQVTFLGLLTACVNSGLVERGKEFFKEMTENYDCQPSQEHYACMVNLLGRAGLINE 622
KPD V F+G LTAC + GLV++GKE F M + + P HY CMV+LLGRAGL+ E
Sbjct: 568 GLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEE 627
Query: 623 AGELVRNMPIKPDARVWGPLLSACKLHPGSKLAEFAAEKLIDMEPKNAGNYILLSNIYAA 682
A +L+ +MP++P+ +W LL+AC++ ++A +AAEK+ + P+ G+Y+LLSN+YA+
Sbjct: 628 AVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYAS 687
Query: 683 AGKWDGVAKMRSFLRDKGLKKTPGCSWLEINGHVTEFRVADQTHPRAEDIYTIL 700
AG+W+ +AK+R +++KGL+K PG S ++I G EF D++HP +I +L
Sbjct: 688 AGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIEAML 739
BLAST of HG10021379 vs. TAIR 10
Match:
AT3G22690.2 (INVOLVED IN: photosystem II assembly, regulation of chlorophyll biosynthetic process, photosystem I assembly, thylakoid membrane organization, RNA modification; LOCATED IN: chloroplast; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT2G29760.1). )
HSP 1 Score: 409.5 bits (1051), Expect = 5.8e-114
Identity = 228/714 (31.93%), Postives = 391/714 (54.76%), Query Frame = 0
Query: 23 QSRLLNTLSFLFNRCSSRQHLQQIHARFVLHGFHQNPTLSSKLIDCYANLGL---LNLSL 82
QS+ C + L+ H G + + +KL+ LG L+ +
Sbjct: 28 QSKCTKATPSSLKNCKTIDELKMFHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAK 87
Query: 83 QVFYAIIDPNST-LYNAILRNLTRYGECERTLLVYQQMVAKSMHPDEETYPSVLRSCCSF 142
+VF + +YN+++R G C +L++ +M+ + PD+ T+P L +C
Sbjct: 88 EVFENSESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKS 147
Query: 143 SNVGFGRKVHGYLVKLGFDSFDMVATALAEMYEECIDFEHAHQLFDKRSVKDLECWSSLT 202
G G ++HG +VK+G+ V +L Y EC + + A ++FD+ S +++ W+S+
Sbjct: 148 RAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMI 207
Query: 203 TETPQNGNGEGIFRLFGRM-RAEQLVPDSLTFINLLRSIAGLNSIRLAKIVHSITIVSKL 262
+ + LF RM R E++ P+S+T + ++ + A L + + V++ S +
Sbjct: 208 CGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGI 267
Query: 263 CGDLLVNTALLSLYSKLGSLVDARKLFDKMPEKDRVVWNIMIAAYARGGKPTECLELFKS 322
+ L+ +AL+ +Y K ++ A++LFD+ + + N M + Y R G E L +F
Sbjct: 268 EVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNL 327
Query: 323 MARSGIRSDMFTALPVISSISQLKCVDWGKQTHAHVLRNGSDSQVSVHNSLIDMYRECNI 382
M SG+R D + L ISS SQL+ + WGK H +VLRNG +S ++ N+LIDMY +C+
Sbjct: 328 MMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHR 387
Query: 383 LDSACKIFNCMTDKSVISWSAMIKGYVKHGQ------------------------SLIAL 442
D+A +IF+ M++K+V++W++++ GYV++G+ L+
Sbjct: 388 QDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQG 447
Query: 443 SLF--------SRMKSDGIQADFITVINILPAFVHIGVLENVKYLHGYSMKLGLTSLPSL 502
SLF S +G+ AD +T+++I A H+G L+ K+++ Y K G+ L
Sbjct: 448 SLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRL 507
Query: 503 NTALLITYAKCGCIEMAQRIFEEERIDDKDLIMWNSMISAHANHGEWSQCFKLYNQMKCS 562
T L+ +++CG E A IF + ++D+ W + I A A G + +L++ M
Sbjct: 508 GTTLVDMFSRCGDPESAMSIFNS--LTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQ 567
Query: 563 NTKPDQVTFLGLLTACVNSGLVERGKEFFKEMTENYDCQPSQEHYACMVNLLGRAGLINE 622
KPD V F+G LTAC + GLV++GKE F M + + P HY CMV+LLGRAGL+ E
Sbjct: 568 GLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEE 627
Query: 623 AGELVRNMPIKPDARVWGPLLSACKLHPGSKLAEFAAEKLIDMEPKNAGNYILLSNIYAA 682
A +L+ +MP++P+ +W LL+AC++ ++A +AAEK+ + P+ G+Y+LLSN+YA+
Sbjct: 628 AVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYAS 687
Query: 683 AGKWDGVAKMRSFLRDKGLKKTPGCSWLEINGHVTEFRVADQTHPRAEDIYTIL 700
AG+W+ +AK+R +++KGL+K PG S ++I G EF D++HP +I +L
Sbjct: 688 AGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIEAML 739
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_038894029.1 | 0.0e+00 | 92.93 | pentatricopeptide repeat-containing protein At1g11290, chloroplastic-like [Benin... | [more] |
XP_008444579.1 | 0.0e+00 | 88.63 | PREDICTED: pentatricopeptide repeat-containing protein At1g11290, chloroplastic-... | [more] |
XP_022139869.1 | 0.0e+00 | 85.42 | pentatricopeptide repeat-containing protein At1g11290, chloroplastic-like [Momor... | [more] |
KAG6573373.1 | 0.0e+00 | 85.08 | Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita a... | [more] |
XP_023541395.1 | 0.0e+00 | 84.25 | pentatricopeptide repeat-containing protein At1g11290, chloroplastic-like [Cucur... | [more] |
Match Name | E-value | Identity | Description | |
Q3E6Q1 | 6.2e-121 | 32.87 | Pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Arabidop... | [more] |
Q9LN01 | 1.3e-118 | 35.47 | Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidop... | [more] |
O81767 | 2.8e-113 | 33.48 | Pentatricopeptide repeat-containing protein At4g33990 OS=Arabidopsis thaliana OX... | [more] |
Q9LUJ2 | 8.1e-113 | 31.93 | Pentatricopeptide repeat-containing protein At3g22690 OS=Arabidopsis thaliana OX... | [more] |
Q9SN39 | 1.1e-112 | 33.68 | Pentatricopeptide repeat-containing protein DOT4, chloroplastic OS=Arabidopsis t... | [more] |
Match Name | E-value | Identity | Description | |
A0A0A0M0Z6 | 0.0e+00 | 89.88 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G534720 PE=4 SV=1 | [more] |
A0A5D3DB69 | 0.0e+00 | 88.63 | Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... | [more] |
A0A1S3BBG7 | 0.0e+00 | 88.63 | pentatricopeptide repeat-containing protein At1g11290, chloroplastic-like OS=Cuc... | [more] |
A0A6J1CE61 | 0.0e+00 | 85.42 | pentatricopeptide repeat-containing protein At1g11290, chloroplastic-like OS=Mom... | [more] |
A0A6J1K3Q8 | 0.0e+00 | 84.39 | pentatricopeptide repeat-containing protein At1g11290, chloroplastic-like OS=Cuc... | [more] |
Match Name | E-value | Identity | Description | |
AT1G11290.1 | 4.4e-122 | 32.87 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT1G08070.1 | 9.2e-120 | 35.47 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT4G33990.1 | 2.0e-114 | 33.48 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT3G22690.1 | 5.8e-114 | 31.93 | CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1685 (InterPro:IPR012... | [more] |
AT3G22690.2 | 5.8e-114 | 31.93 | INVOLVED IN: photosystem II assembly, regulation of chlorophyll biosynthetic pro... | [more] |