HG10021303 (gene) Bottle gourd (Hangzhou Gourd) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCGACTCATAGGAACGACCATAGAACTTGGAGGAGGTCGACTGACCCTATGAGGGTAAAGTTATGCCTAAGTGTTGTTGTACTTTTACACATACTTGGATCACTAGTGAAATAAACCCGACAATTTATAACGGTTAGTAACGACTTGATTAATGACCTTAGAAATTTATTAGCGAATAACCGTTAGGAAACCTATTTCTATATAATCGAGAGGGTTTGTGACATTTGAGGTACGCTAAAATACATTCTAAACTCACTCTCTATATCAATTTATACCTCTAAACTTTAAAGGTTGTATCAATTAAAATCCTGAATTTCGTAAGTGTATTAATTTACACTTTTCTTTAAATTTCATTAAAAGTATCATGTTAGACTTGTAATTATATCAATTAAACTTCTAAATTGTTATAGTGAATCAATTTGTATTATTTATTAAAAATATCTTCAATAATCTTGAATGCATTAGTTCTACATCTATATCTATACTATATTAAATGTGGGCATAAGGAAGAATTTTTACCTTTCCATATTGCCCTTCAATTTTAAGCAAATTCCTATTATACCCTCACATCTCTTAGGTTAGTTACCACTCATCACCCATTCTATTTACTCACACCCTTTCATGTGATTGTTTGTTACGATTGTGTTTTTTCAGTACATCCTCATCTGTATTCAGGGGATTGGTTTTGGTGGAGTGATTGGTTCGGAGTCTGGAGACATTTTGGCTACTCTGGCTGGGCACCGTGAAGGGTTGTGTAGTGTGTTGGGAGCTGAGGCCACTGCTGTGTATGAGGGTCTCAGGCTGGCAGAGAGATTGAGTCTTTCTAATCTTCTAGTTCTTTCGAACTCTTTATCTCTTATTCAAATGCTTAAAGGGACTACTGGTATCTACTGGGAGGTTTCTAATTATATTGAAGATATCAAATGTTGCTTATCCGCTTTTCGGTCAGTGACTTTTCGCCATGTGTCAAGATCTTCCAATCAAACGGCACACTTGTTGGCTCGTGATGGTTCGTCGGGTGTGAGTTTTTTACGACTCAGTTTTTTTTCGGATACGTTGTCCCATTTGTATTCAGGGGATGTTCGTTGTTTGAACAACATTGAGACTATCTAA ATGTCGACTCATAGGAACGACCATAGAACTTGGAGGAGGTCGACTGACCCTATGAGGTACATCCTCATCTGTATTCAGGGGATTGGTTTTGGTGGAGTGATTGGTTCGGAGTCTGGAGACATTTTGGCTACTCTGGCTGGGCACCGTGAAGGGTTGTGTAGTGTGTTGGGAGCTGAGGCCACTGCTGTGTATGAGGGTCTCAGGCTGGCAGAGAGATTGAGTCTTTCTAATCTTCTAGTTCTTTCGAACTCTTTATCTCTTATTCAAATGCTTAAAGGGACTACTGGTATCTACTGGGAGGTTTCTAATTATATTGAAGATATCAAATGTTGCTTATCCGCTTTTCGGTCAGTGACTTTTCGCCATGTGTCAAGATCTTCCAATCAAACGGCACACTTGTTGGCTCGTGATGGTTCGTCGGGTGTGAGTTTTTTACGACTCAGTTTTTTTTCGGATACGTTGTCCCATTTGTATTCAGGGGATGTTCGTTGTTTGAACAACATTGAGACTATCTAA ATGTCGACTCATAGGAACGACCATAGAACTTGGAGGAGGTCGACTGACCCTATGAGGTACATCCTCATCTGTATTCAGGGGATTGGTTTTGGTGGAGTGATTGGTTCGGAGTCTGGAGACATTTTGGCTACTCTGGCTGGGCACCGTGAAGGGTTGTGTAGTGTGTTGGGAGCTGAGGCCACTGCTGTGTATGAGGGTCTCAGGCTGGCAGAGAGATTGAGTCTTTCTAATCTTCTAGTTCTTTCGAACTCTTTATCTCTTATTCAAATGCTTAAAGGGACTACTGGTATCTACTGGGAGGTTTCTAATTATATTGAAGATATCAAATGTTGCTTATCCGCTTTTCGGTCAGTGACTTTTCGCCATGTGTCAAGATCTTCCAATCAAACGGCACACTTGTTGGCTCGTGATGGTTCGTCGGGTGTGAGTTTTTTACGACTCAGTTTTTTTTCGGATACGTTGTCCCATTTGTATTCAGGGGATGTTCGTTGTTTGAACAACATTGAGACTATCTAA MSTHRNDHRTWRRSTDPMRYILICIQGIGFGGVIGSESGDILATLAGHREGLCSVLGAEATAVYEGLRLAERLSLSNLLVLSNSLSLIQMLKGTTGIYWEVSNYIEDIKCCLSAFRSVTFRHVSRSSNQTAHLLARDGSSGVSFLRLSFFSDTLSHLYSGDVRCLNNIETI Homology
BLAST of HG10021303 vs. NCBI nr
Match: GAU28886.1 (hypothetical protein TSUD_293380 [Trifolium subterraneum]) HSP 1 Score: 69.7 bits (169), Expect = 2.8e-08 Identity = 45/119 (37.82%), Postives = 69/119 (57.98%), Query Frame = 0
BLAST of HG10021303 vs. NCBI nr
Match: KAF7802400.1 (uncharacterized protein G2W53_041511 [Senna tora]) HSP 1 Score: 68.9 bits (167), Expect = 4.7e-08 Identity = 45/107 (42.06%), Postives = 63/107 (58.88%), Query Frame = 0
BLAST of HG10021303 vs. NCBI nr
Match: GAU51664.1 (hypothetical protein TSUD_268670 [Trifolium subterraneum]) HSP 1 Score: 67.8 bits (164), Expect = 1.0e-07 Identity = 42/112 (37.50%), Postives = 66/112 (58.93%), Query Frame = 0
BLAST of HG10021303 vs. NCBI nr
Match: KAF5180544.1 (In chloroplast atpase biogenesis protein, partial [Thalictrum thalictroides]) HSP 1 Score: 67.0 bits (162), Expect = 1.8e-07 Identity = 38/115 (33.04%), Postives = 59/115 (51.30%), Query Frame = 0
BLAST of HG10021303 vs. NCBI nr
Match: XP_030483444.1 (uncharacterized protein LOC115700033 [Cannabis sativa]) HSP 1 Score: 66.6 bits (161), Expect = 2.3e-07 Identity = 45/109 (41.28%), Postives = 60/109 (55.05%), Query Frame = 0
BLAST of HG10021303 vs. ExPASy TrEMBL
Match: A0A2Z6M8Z8 (RNase H domain-containing protein OS=Trifolium subterraneum OX=3900 GN=TSUD_293380 PE=4 SV=1) HSP 1 Score: 69.7 bits (169), Expect = 1.3e-08 Identity = 45/119 (37.82%), Postives = 69/119 (57.98%), Query Frame = 0
BLAST of HG10021303 vs. ExPASy TrEMBL
Match: A0A2Z6P5H6 (Uncharacterized protein OS=Trifolium subterraneum OX=3900 GN=TSUD_268670 PE=4 SV=1) HSP 1 Score: 67.8 bits (164), Expect = 5.1e-08 Identity = 42/112 (37.50%), Postives = 66/112 (58.93%), Query Frame = 0
BLAST of HG10021303 vs. ExPASy TrEMBL
Match: A0A7J6V620 (In chloroplast atpase biogenesis protein OS=Thalictrum thalictroides OX=46969 GN=FRX31_029867 PE=4 SV=1) HSP 1 Score: 67.0 bits (162), Expect = 8.7e-08 Identity = 38/115 (33.04%), Postives = 59/115 (51.30%), Query Frame = 0
BLAST of HG10021303 vs. ExPASy TrEMBL
Match: A0A2Z6P3A9 (RNase H domain-containing protein OS=Trifolium subterraneum OX=3900 GN=TSUD_188980 PE=4 SV=1) HSP 1 Score: 66.2 bits (160), Expect = 1.5e-07 Identity = 43/119 (36.13%), Postives = 67/119 (56.30%), Query Frame = 0
BLAST of HG10021303 vs. ExPASy TrEMBL
Match: A0A2Z6MP33 (RNase H domain-containing protein OS=Trifolium subterraneum OX=3900 GN=TSUD_20510 PE=4 SV=1) HSP 1 Score: 65.1 bits (157), Expect = 3.3e-07 Identity = 40/112 (35.71%), Postives = 67/112 (59.82%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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