HG10021234 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10021234
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	Squamosa promoter-binding-like protein
Location	Chr05: 6820139 .. 6820552 (+)
RNA-Seq Expression	HG10021234
Synteny	HG10021234

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCACTGGAAAAGCTGATGGAAAAAGGAGGCTAAATTATTACGAAATGGAGGAACAGGAGGAAGAAGATGAAGAAGAAGAAGAAGAAGAAGAGGAGGAGGAGGAAGATGAGCAACAAGAAATTGATGCAGAATTAGGGTTTGAAGGGGATTTCAATAAGAAGAAGAAAATTCTGACTTCTGGGGGTTCTTCTAATAAAAAATCAGGATCTGGGTACGGCGGAGCTGCGGCGGCGCCGCCCTCCTGTCAGGCGGATAATTGCAATGCTGATCTGTCCGGTTCAAAGCGGTACTATCGCCGTCATAAGGTCTGTGAGTTTCATGCTAAGGCTCCGGCGGTTGCGGTGGCCGGAATCCCCCAGCGGTTCTGTCAACAATGCAGCAGGTATTTTGGGACAAAAAAAAAACCCTAA

mRNA sequence

ATGGCCACTGGAAAAGCTGATGGAAAAAGGAGGCTAAATTATTACGAAATGGAGGAACAGGAGGAAGAAGATGAAGAAGAAGAAGAAGAAGAAGAGGAGGAGGAGGAAGATGAGCAACAAGAAATTGATGCAGAATTAGGGTTTGAAGGGGATTTCAATAAGAAGAAGAAAATTCTGACTTCTGGGGGTTCTTCTAATAAAAAATCAGGATCTGGGTACGGCGGAGCTGCGGCGGCGCCGCCCTCCTGTCAGGCGGATAATTGCAATGCTGATCTGTCCGGTTCAAAGCGGTACTATCGCCGTCATAAGGTCTGTGAGTTTCATGCTAAGGCTCCGGCGGTTGCGGTGGCCGGAATCCCCCAGCGGTTCTGTCAACAATGCAGCAGGTATTTTGGGACAAAAAAAAAACCCTAA

Coding sequence (CDS)

ATGGCCACTGGAAAAGCTGATGGAAAAAGGAGGCTAAATTATTACGAAATGGAGGAACAGGAGGAAGAAGATGAAGAAGAAGAAGAAGAAGAAGAGGAGGAGGAGGAAGATGAGCAACAAGAAATTGATGCAGAATTAGGGTTTGAAGGGGATTTCAATAAGAAGAAGAAAATTCTGACTTCTGGGGGTTCTTCTAATAAAAAATCAGGATCTGGGTACGGCGGAGCTGCGGCGGCGCCGCCCTCCTGTCAGGCGGATAATTGCAATGCTGATCTGTCCGGTTCAAAGCGGTACTATCGCCGTCATAAGGTCTGTGAGTTTCATGCTAAGGCTCCGGCGGTTGCGGTGGCCGGAATCCCCCAGCGGTTCTGTCAACAATGCAGCAGGTATTTTGGGACAAAAAAAAAACCCTAA

Protein sequence

MATGKADGKRRLNYYEMEEQEEEDEEEEEEEEEEEEDEQQEIDAELGFEGDFNKKKKILTSGGSSNKKSGSGYGGAAAAPPSCQADNCNADLSGSKRYYRRHKVCEFHAKAPAVAVAGIPQRFCQQCSRYFGTKKKP

Homology

[Close]

BLAST of HG10021234 vs. NCBI nr
Match: XP_038894994.1 (squamosa promoter-binding-like protein 3 isoform X1 [Benincasa hispida])

HSP 1 Score: 202.6 bits (514), Expect = 2.2e-48
Identity = 116/135 (85.93%), Postives = 123/135 (91.11%), Query Frame = 0


Query: 1   MATGKADGKRRLNYYEMEEQEEEDEEEEEEEEEEEEDEQQEIDAELGFEGDFNKKKKILT 60
           MATGKADGKRRLNYYEMEE+EEEDEEEEEEEE+ EE   Q+I  ELGF GDFNKKKKILT
Sbjct: 1   MATGKADGKRRLNYYEMEEEEEEDEEEEEEEEDHEE---QQIHGELGFAGDFNKKKKILT 60

Query: 61  SGGSSNKKSGSGYGGAAAAPPSCQADNCNADLSGSKRYYRRHKVCEFHAKAPAVAVAGIP 120
           SG SSNKKSGSGYGGAAAA PSCQADNCNADLSGSKRY+RRHKVCEFHAKAPAVAVAGI 
Sbjct: 61  SGTSSNKKSGSGYGGAAAA-PSCQADNCNADLSGSKRYHRRHKVCEFHAKAPAVAVAGIH 120

Query: 121 QRFCQQCSRYFGTKK 136
           QRFCQQCSR+ G ++
Sbjct: 121 QRFCQQCSRFHGLQE 131

[Close]

BLAST of HG10021234 vs. NCBI nr
Match: XP_038894995.1 (squamosa promoter-binding protein 2-like isoform X2 [Benincasa hispida])

HSP 1 Score: 198.7 bits (504), Expect = 3.2e-47
Identity = 115/129 (89.15%), Postives = 119/129 (92.25%), Query Frame = 0


Query: 1   MATGKADGKRRLNYYEMEEQEEEDEEEEEEEEEEEEDEQQEIDAELGFEGDFNKKKKILT 60
           MATGKADGKRRLNYYEMEE+EEEDEEEEEEEE+ EE   Q+I  ELGF GDFNKKKKILT
Sbjct: 1   MATGKADGKRRLNYYEMEEEEEEDEEEEEEEEDHEE---QQIHGELGFAGDFNKKKKILT 60

Query: 61  SGGSSNKKSGSGYGGAAAAPPSCQADNCNADLSGSKRYYRRHKVCEFHAKAPAVAVAGIP 120
           SG SSNKKSGSGYGGAAAA PSCQADNCNADLSGSKRY+RRHKVCEFHAKAPAVAVAGI 
Sbjct: 61  SGTSSNKKSGSGYGGAAAA-PSCQADNCNADLSGSKRYHRRHKVCEFHAKAPAVAVAGIH 120

Query: 121 QRFCQQCSR 130
           QRFCQQCSR
Sbjct: 121 QRFCQQCSR 125

[Close]

BLAST of HG10021234 vs. NCBI nr
Match: XP_008442764.1 (PREDICTED: squamosa promoter-binding-like protein 3 [Cucumis melo])

HSP 1 Score: 198.4 bits (503), Expect = 4.1e-47
Identity = 114/138 (82.61%), Postives = 123/138 (89.13%), Query Frame = 0


Query: 1   MATGKADGKRRLNYYEMEEQEEEDEEEEEEEEEEEEDEQQEID-AELGFEGDFNKKKKIL 60
           MATGKADGKRRLNYYEM   EEEDEE+EEEEEEE+EDE+QEID   LGF GDFNKKKK+L
Sbjct: 1   MATGKADGKRRLNYYEM---EEEDEEDEEEEEEEDEDEEQEIDGGGLGFSGDFNKKKKVL 60

Query: 61  TSGGSSNKKSGSGYGGA--AAAPPSCQADNCNADLSGSKRYYRRHKVCEFHAKAPAVAVA 120
           TSGGSSNKKSGSG+G    AAAPP CQADNCNADLSGSKRY+RRHKVCEFHAKAPAVAVA
Sbjct: 61  TSGGSSNKKSGSGFGTGPPAAAPPPCQADNCNADLSGSKRYHRRHKVCEFHAKAPAVAVA 120

Query: 121 GIPQRFCQQCSRYFGTKK 136
           GI QRFCQQCSR+ G ++
Sbjct: 121 GIDQRFCQQCSRFHGLQE 135

[Close]

BLAST of HG10021234 vs. NCBI nr
Match: KAA0057003.1 (squamosa promoter-binding-like protein 3 [Cucumis melo var. makuwa] >TYK26430.1 squamosa promoter-binding-like protein 3 [Cucumis melo var. makuwa])

HSP 1 Score: 194.5 bits (493), Expect = 6.0e-46
Identity = 113/132 (85.61%), Postives = 119/132 (90.15%), Query Frame = 0


Query: 1   MATGKADGKRRLNYYEMEEQEEEDEEEEEEEEEEEEDEQQEID-AELGFEGDFNKKKKIL 60
           MATGKADGKRRLNYYEM   EEEDEE+EEEEEEE+EDE+QEID   LGF GDFNKKKK+L
Sbjct: 1   MATGKADGKRRLNYYEM---EEEDEEDEEEEEEEDEDEEQEIDGGGLGFSGDFNKKKKVL 60

Query: 61  TSGGSSNKKSGSGYGGA--AAAPPSCQADNCNADLSGSKRYYRRHKVCEFHAKAPAVAVA 120
           TSGGSSNKKSGSG+G    AAAPP CQADNCNADLSGSKRY+RRHKVCEFHAKAPAVAVA
Sbjct: 61  TSGGSSNKKSGSGFGTGPPAAAPPPCQADNCNADLSGSKRYHRRHKVCEFHAKAPAVAVA 120

Query: 121 GIPQRFCQQCSR 130
           GI QRFCQQCSR
Sbjct: 121 GIDQRFCQQCSR 129

[Close]

BLAST of HG10021234 vs. NCBI nr
Match: XP_011653273.1 (squamosa promoter-binding-like protein 3 [Cucumis sativus] >KGN64693.1 hypothetical protein Csa_013791 [Cucumis sativus])

HSP 1 Score: 189.9 bits (481), Expect = 1.5e-44
Identity = 105/137 (76.64%), Postives = 115/137 (83.94%), Query Frame = 0


Query: 1   MATGKADGKRRLNYYEMEEQEEEDEEEEEEEEEEEEDEQQEIDAELGFEGDFNKKKKILT 60
           MATGKADGKRRL+YYEMEE++EED       EEE+EDE+QEIDAELGF GDFNKKKKI T
Sbjct: 1   MATGKADGKRRLSYYEMEEEDEED-------EEEDEDEEQEIDAELGFSGDFNKKKKIFT 60

Query: 61  SGGSSNKKSGSGYGG--AAAAPPSCQADNCNADLSGSKRYYRRHKVCEFHAKAPAVAVAG 120
           SGGSSNKKS S +GG  AAA PP CQADNCNADLS SKRY+RRHKVCEFHAKAP V V G
Sbjct: 61  SGGSSNKKSASAFGGAPAAAPPPPCQADNCNADLSSSKRYHRRHKVCEFHAKAPVVPVTG 120

Query: 121 IPQRFCQQCSRYFGTKK 136
           I QRFCQQCSR+ G ++
Sbjct: 121 IDQRFCQQCSRFHGLQE 130

[Close]

BLAST of HG10021234 vs. ExPASy Swiss-Prot
Match: A2YFT9 (Squamosa promoter-binding-like protein 10 OS=Oryza sativa subsp. indica OX=39946 GN=SPL10 PE=2 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 3.2e-18
Identity = 41/61 (67.21%), Postives = 48/61 (78.69%), Query Frame = 0


Query: 70  GSGYGGAAAAPPSCQADNCNADLSGSKRYYRRHKVCEFHAKAPAVAVAGIPQRFCQQCSR 129
           G G+GGA   PP CQA+ C ADLSG+K Y+RRHKVCE+HAKA  VA +G  QRFCQQCSR
Sbjct: 168 GLGFGGAHHQPPRCQAEGCKADLSGAKHYHRRHKVCEYHAKASVVAASGKQQRFCQQCSR 227

Query: 130 Y 131
           +
Sbjct: 228 F 228

[Close]

BLAST of HG10021234 vs. ExPASy Swiss-Prot
Match: Q0DAE8 (Squamosa promoter-binding-like protein 10 OS=Oryza sativa subsp. japonica OX=39947 GN=SPL10 PE=2 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 3.2e-18
Identity = 41/61 (67.21%), Postives = 48/61 (78.69%), Query Frame = 0


Query: 70  GSGYGGAAAAPPSCQADNCNADLSGSKRYYRRHKVCEFHAKAPAVAVAGIPQRFCQQCSR 129
           G G+GGA   PP CQA+ C ADLSG+K Y+RRHKVCE+HAKA  VA +G  QRFCQQCSR
Sbjct: 168 GLGFGGAHHQPPRCQAEGCKADLSGAKHYHRRHKVCEYHAKASVVAASGKQQRFCQQCSR 227

Query: 130 Y 131
           +
Sbjct: 228 F 228

[Close]

BLAST of HG10021234 vs. ExPASy Swiss-Prot
Match: Q0E3F8 (Squamosa promoter-binding-like protein 5 OS=Oryza sativa subsp. japonica OX=39947 GN=SPL5 PE=2 SV=1)

HSP 1 Score: 85.9 bits (211), Expect = 3.9e-16
Identity = 42/63 (66.67%), Postives = 47/63 (74.60%), Query Frame = 0


Query: 72  GYGGAAAA----PPSCQADNCNADLSGSKRYYRRHKVCEFHAKAPAVAVAGIPQRFCQQC 131
           G G AAAA    PP CQA+ C ADLS +K Y+RRHKVC+FHAKA AV  AG  QRFCQQC
Sbjct: 192 GLGLAAAAHHHQPPRCQAEGCKADLSAAKHYHRRHKVCDFHAKAAAVLAAGKQQRFCQQC 251

[Close]

BLAST of HG10021234 vs. ExPASy Swiss-Prot
Match: Q7EXZ2 (Squamosa promoter-binding-like protein 14 OS=Oryza sativa subsp. japonica OX=39947 GN=SPL14 PE=2 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 8.7e-16
Identity = 46/82 (56.10%), Postives = 52/82 (63.41%), Query Frame = 0


Query: 64  SSNKKSGSGYGG---------AAAA------PPSCQADNCNADLSGSKRYYRRHKVCEFH 123
           SS+K +G G GG         AAAA      PP CQ + C ADLSG K YY RHKVC  H
Sbjct: 70  SSSKAAGGGRGGGGKNKGKGVAAAAPPPPPPPPRCQVEGCGADLSGIKNYYCRHKVCFMH 129

Query: 124 AKAPAVAVAGIPQRFCQQCSRY 131
           +KAP V VAG+ QRFCQQCSR+
Sbjct: 130 SKAPRVVVAGLEQRFCQQCSRF 151

[Close]

BLAST of HG10021234 vs. ExPASy Swiss-Prot
Match: Q38740 (Squamosa promoter-binding protein 2 OS=Antirrhinum majus OX=4151 GN=SBP2 PE=2 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 1.1e-15
Identity = 58/113 (51.33%), Postives = 73/113 (64.60%), Query Frame = 0


Query: 21  EEEDEEEEEEEEEEEEDEQQEIDAELGFEGDFNKKKKILTSGGSSNKKSGSGY---GGAA 80
           +E  + EEEEE E+EE+E+QE   ++ F     KKKK L  G  S  KSG  +   GG  
Sbjct: 21  DEGSDFEEEEEGEDEEEEEQERVVKVNFAESQLKKKK-LNLGEGSGGKSGEKHTASGGGV 80

Query: 81  AAPPSCQADNCNADLSGSKRYYRRHKVCEFHAKAPAVAVAGIPQRFCQQCSRY 131
            A P C  +NC ADL   K+YY+RH+VCE HAKAP V+V G+ QRFCQQCSR+
Sbjct: 81  VAQPCCLVENCGADLRNCKKYYQRHRVCEVHAKAPVVSVEGLMQRFCQQCSRF 132

[Close]

BLAST of HG10021234 vs. ExPASy TrEMBL
Match: A0A1S3B6H6 (squamosa promoter-binding-like protein 3 OS=Cucumis melo OX=3656 GN=LOC103486540 PE=4 SV=1)

HSP 1 Score: 198.4 bits (503), Expect = 2.0e-47
Identity = 114/138 (82.61%), Postives = 123/138 (89.13%), Query Frame = 0


Query: 1   MATGKADGKRRLNYYEMEEQEEEDEEEEEEEEEEEEDEQQEID-AELGFEGDFNKKKKIL 60
           MATGKADGKRRLNYYEM   EEEDEE+EEEEEEE+EDE+QEID   LGF GDFNKKKK+L
Sbjct: 1   MATGKADGKRRLNYYEM---EEEDEEDEEEEEEEDEDEEQEIDGGGLGFSGDFNKKKKVL 60

Query: 61  TSGGSSNKKSGSGYGGA--AAAPPSCQADNCNADLSGSKRYYRRHKVCEFHAKAPAVAVA 120
           TSGGSSNKKSGSG+G    AAAPP CQADNCNADLSGSKRY+RRHKVCEFHAKAPAVAVA
Sbjct: 61  TSGGSSNKKSGSGFGTGPPAAAPPPCQADNCNADLSGSKRYHRRHKVCEFHAKAPAVAVA 120

Query: 121 GIPQRFCQQCSRYFGTKK 136
           GI QRFCQQCSR+ G ++
Sbjct: 121 GIDQRFCQQCSRFHGLQE 135

[Close]

BLAST of HG10021234 vs. ExPASy TrEMBL
Match: A0A5D3DT58 (Squamosa promoter-binding-like protein 3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold861G00940 PE=4 SV=1)

HSP 1 Score: 194.5 bits (493), Expect = 2.9e-46
Identity = 113/132 (85.61%), Postives = 119/132 (90.15%), Query Frame = 0


Query: 1   MATGKADGKRRLNYYEMEEQEEEDEEEEEEEEEEEEDEQQEID-AELGFEGDFNKKKKIL 60
           MATGKADGKRRLNYYEM   EEEDEE+EEEEEEE+EDE+QEID   LGF GDFNKKKK+L
Sbjct: 1   MATGKADGKRRLNYYEM---EEEDEEDEEEEEEEDEDEEQEIDGGGLGFSGDFNKKKKVL 60

Query: 61  TSGGSSNKKSGSGYGGA--AAAPPSCQADNCNADLSGSKRYYRRHKVCEFHAKAPAVAVA 120
           TSGGSSNKKSGSG+G    AAAPP CQADNCNADLSGSKRY+RRHKVCEFHAKAPAVAVA
Sbjct: 61  TSGGSSNKKSGSGFGTGPPAAAPPPCQADNCNADLSGSKRYHRRHKVCEFHAKAPAVAVA 120

Query: 121 GIPQRFCQQCSR 130
           GI QRFCQQCSR
Sbjct: 121 GIDQRFCQQCSR 129

[Close]

BLAST of HG10021234 vs. ExPASy TrEMBL
Match: A0A0A0LSD9 (Squamosa promoter-binding-like protein OS=Cucumis sativus OX=3659 GN=Csa_1G074980 PE=4 SV=1)

HSP 1 Score: 189.9 bits (481), Expect = 7.1e-45
Identity = 105/137 (76.64%), Postives = 115/137 (83.94%), Query Frame = 0


Query: 1   MATGKADGKRRLNYYEMEEQEEEDEEEEEEEEEEEEDEQQEIDAELGFEGDFNKKKKILT 60
           MATGKADGKRRL+YYEMEE++EED       EEE+EDE+QEIDAELGF GDFNKKKKI T
Sbjct: 1   MATGKADGKRRLSYYEMEEEDEED-------EEEDEDEEQEIDAELGFSGDFNKKKKIFT 60

Query: 61  SGGSSNKKSGSGYGG--AAAAPPSCQADNCNADLSGSKRYYRRHKVCEFHAKAPAVAVAG 120
           SGGSSNKKS S +GG  AAA PP CQADNCNADLS SKRY+RRHKVCEFHAKAP V V G
Sbjct: 61  SGGSSNKKSASAFGGAPAAAPPPPCQADNCNADLSSSKRYHRRHKVCEFHAKAPVVPVTG 120

Query: 121 IPQRFCQQCSRYFGTKK 136
           I QRFCQQCSR+ G ++
Sbjct: 121 IDQRFCQQCSRFHGLQE 130

[Close]

BLAST of HG10021234 vs. ExPASy TrEMBL
Match: A0A6J1EH14 (Squamosa promoter-binding-like protein OS=Cucurbita moschata OX=3662 GN=LOC111434224 PE=4 SV=1)

HSP 1 Score: 180.3 bits (456), Expect = 5.6e-42
Identity = 100/135 (74.07%), Postives = 108/135 (80.00%), Query Frame = 0


Query: 1   MATGKADGKRRLNYYEMEEQEEEDEEEEEEEEEEEEDEQQEIDAELGFEGDFNKKKKILT 60
           MATGKADGKRRLNYY+M           EEEEEEEE+E + +D ELGF GDFNKKKK L 
Sbjct: 1   MATGKADGKRRLNYYDM-----------EEEEEEEEEEVEVVDGELGFGGDFNKKKKTLC 60

Query: 61  SGGSSNKKSGSGYGGAAAAPPSCQADNCNADLSGSKRYYRRHKVCEFHAKAPAVAVAGIP 120
           SGG SNKKSGSGYGGAA A PSCQADNCNADLS SKRY+ RHKVCEFHAKA AV VAGI 
Sbjct: 61  SGGGSNKKSGSGYGGAATAAPSCQADNCNADLSSSKRYHCRHKVCEFHAKALAVMVAGIH 120

Query: 121 QRFCQQCSRYFGTKK 136
           QRFCQQCSR+ G ++
Sbjct: 121 QRFCQQCSRFHGLQE 124

[Close]

BLAST of HG10021234 vs. ExPASy TrEMBL
Match: A0A6J1KHJ1 (Squamosa promoter-binding-like protein OS=Cucurbita maxima OX=3661 GN=LOC111495800 PE=4 SV=1)

HSP 1 Score: 179.9 bits (455), Expect = 7.3e-42
Identity = 99/135 (73.33%), Postives = 108/135 (80.00%), Query Frame = 0


Query: 1   MATGKADGKRRLNYYEMEEQEEEDEEEEEEEEEEEEDEQQEIDAELGFEGDFNKKKKILT 60
           MATGKADGKRRLNYY+M            EEEEEEE+E + +D ELGF GDFNKKKK L+
Sbjct: 1   MATGKADGKRRLNYYDM------------EEEEEEEEEVEVVDGELGFGGDFNKKKKTLS 60

Query: 61  SGGSSNKKSGSGYGGAAAAPPSCQADNCNADLSGSKRYYRRHKVCEFHAKAPAVAVAGIP 120
           SGG SNKKSGSGYGGAA A PSCQADNCNADLS SKRY+ RHKVCEFHAKA AV VAGI 
Sbjct: 61  SGGGSNKKSGSGYGGAATAAPSCQADNCNADLSSSKRYHCRHKVCEFHAKALAVMVAGIH 120

Query: 121 QRFCQQCSRYFGTKK 136
           QRFCQQCSR+ G ++
Sbjct: 121 QRFCQQCSRFHGLQE 123

[Close]

BLAST of HG10021234 vs. TAIR 10
Match: AT1G02065.2 (squamosa promoter binding protein-like 8 )

HSP 1 Score: 83.6 bits (205), Expect = 1.4e-16
Identity = 40/70 (57.14%), Postives = 49/70 (70.00%), Query Frame = 0


Query: 67  KKSGSGYGGAA--AAPPSCQADNCNADLSGSKRYYRRHKVCEFHAKAPAVAVAGIPQRFC 126
           ++S  G  G A   + P CQA+ CNADLS +K Y+RRHKVCEFH+KA  V  AG+ QRFC
Sbjct: 170 RRSRPGESGMANSLSTPRCQAEGCNADLSHAKHYHRRHKVCEFHSKASTVVAAGLSQRFC 229

Query: 127 QQCSRYFGTK 135
           QQCSR+   K
Sbjct: 230 QQCSRFVPPK 239

[Close]

BLAST of HG10021234 vs. TAIR 10
Match: AT1G02065.1 (squamosa promoter binding protein-like 8 )

HSP 1 Score: 82.8 bits (203), Expect = 2.4e-16
Identity = 39/66 (59.09%), Postives = 48/66 (72.73%), Query Frame = 0


Query: 67  KKSGSGYGGAA--AAPPSCQADNCNADLSGSKRYYRRHKVCEFHAKAPAVAVAGIPQRFC 126
           ++S  G  G A   + P CQA+ CNADLS +K Y+RRHKVCEFH+KA  V  AG+ QRFC
Sbjct: 170 RRSRPGESGMANSLSTPRCQAEGCNADLSHAKHYHRRHKVCEFHSKASTVVAAGLSQRFC 229

Query: 127 QQCSRY 131
           QQCSR+
Sbjct: 230 QQCSRF 235

[Close]

BLAST of HG10021234 vs. TAIR 10
Match: AT2G42200.1 (squamosa promoter binding protein-like 9 )

HSP 1 Score: 81.3 bits (199), Expect = 6.8e-16
Identity = 37/71 (52.11%), Postives = 47/71 (66.20%), Query Frame = 0


Query: 60  TSGGSSNKKSGSGYGGAAAAPPSCQADNCNADLSGSKRYYRRHKVCEFHAKAPAVAVAGI 119
           +SGG SN++   G  G +   P CQ + C  DL+ +K YY RH+VC  H+K P V VAGI
Sbjct: 51  SSGGRSNRRVRGGGSGQSGQIPRCQVEGCGMDLTNAKGYYSRHRVCGVHSKTPKVTVAGI 110

Query: 120 PQRFCQQCSRY 131
            QRFCQQCSR+
Sbjct: 111 EQRFCQQCSRF 121

[Close]

BLAST of HG10021234 vs. TAIR 10
Match: AT2G33810.1 (squamosa promoter binding protein-like 3 )

HSP 1 Score: 73.2 bits (178), Expect = 1.9e-13
Identity = 54/130 (41.54%), Postives = 76/130 (58.46%), Query Frame = 0


Query: 1   MATGKADGKRRLNYYEMEEQEEEDEEEEEEEEEEEEDEQQEIDAELGFEGDFNKKKKILT 60
           M   KA+GKR L   E+ E+EEE+EE E+E+  EEE+                KK+K   
Sbjct: 3   MRRSKAEGKRSLR--ELSEEEEEEEETEDEDTFEEEEA-------------LEKKQK--- 62

Query: 61  SGGSSNKKSGSGYGGAAAAPPSCQADNCNADLSGSKRYYRRHKVCEFHAKAPAVAVAGIP 120
                        G A ++   CQ ++C AD+S +K+Y++RHKVC+FHAKAP V ++G+ 
Sbjct: 63  -------------GKATSSSGVCQVESCTADMSKAKQYHKRHKVCQFHAKAPHVRISGLH 101

Query: 121 QRFCQQCSRY 131
           QRFCQQCSR+
Sbjct: 123 QRFCQQCSRF 101

[Close]

BLAST of HG10021234 vs. TAIR 10
Match: AT3G15270.1 (squamosa promoter binding protein-like 5 )

HSP 1 Score: 72.0 bits (175), Expect = 4.1e-13
Identity = 42/98 (42.86%), Postives = 59/98 (60.20%), Query Frame = 0


Query: 35  EEDEQQEIDAELGFEGDFNKKKKIL--TSGGSSNKKSGSGYGGAAAAPPSCQADNCNADL 94
           EE+ +  +D E    GD +K+KK++    G S+++               CQ D C  +L
Sbjct: 23  EEEMENGMDGEEEDGGDEDKRKKVMERVRGPSTDR----------VPSRLCQVDRCTVNL 82

Query: 95  SGSKRYYRRHKVCEFHAKAPAVAVAGIPQRFCQQCSRY 131
           + +K+YYRRH+VCE HAKA A  VAG+ QRFCQQCSR+
Sbjct: 83  TEAKQYYRRHRVCEVHAKASAATVAGVRQRFCQQCSRF 110

The following BLAST results are available for this feature:

BLAST of HG10021234 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038894994.1	2.2e-48	85.93	squamosa promoter-binding-like protein 3 isoform X1 [Benincasa hispida]	[more]
XP_038894995.1	3.2e-47	89.15	squamosa promoter-binding protein 2-like isoform X2 [Benincasa hispida]	[more]
XP_008442764.1	4.1e-47	82.61	PREDICTED: squamosa promoter-binding-like protein 3 [Cucumis melo]	[more]
KAA0057003.1	6.0e-46	85.61	squamosa promoter-binding-like protein 3 [Cucumis melo var. makuwa] >TYK26430.1 ...	[more]
XP_011653273.1	1.5e-44	76.64	squamosa promoter-binding-like protein 3 [Cucumis sativus] >KGN64693.1 hypotheti...	[more]

BLAST of HG10021234 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
A2YFT9	3.2e-18	67.21	Squamosa promoter-binding-like protein 10 OS=Oryza sativa subsp. indica OX=39946...	[more]
Q0DAE8	3.2e-18	67.21	Squamosa promoter-binding-like protein 10 OS=Oryza sativa subsp. japonica OX=399...	[more]
Q0E3F8	3.9e-16	66.67	Squamosa promoter-binding-like protein 5 OS=Oryza sativa subsp. japonica OX=3994...	[more]
Q7EXZ2	8.7e-16	56.10	Squamosa promoter-binding-like protein 14 OS=Oryza sativa subsp. japonica OX=399...	[more]
Q38740	1.1e-15	51.33	Squamosa promoter-binding protein 2 OS=Antirrhinum majus OX=4151 GN=SBP2 PE=2 SV...	[more]

BLAST of HG10021234 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3B6H6	2.0e-47	82.61	squamosa promoter-binding-like protein 3 OS=Cucumis melo OX=3656 GN=LOC103486540...	[more]
A0A5D3DT58	2.9e-46	85.61	Squamosa promoter-binding-like protein 3 OS=Cucumis melo var. makuwa OX=1194695 ...	[more]
A0A0A0LSD9	7.1e-45	76.64	Squamosa promoter-binding-like protein OS=Cucumis sativus OX=3659 GN=Csa_1G07498...	[more]
A0A6J1EH14	5.6e-42	74.07	Squamosa promoter-binding-like protein OS=Cucurbita moschata OX=3662 GN=LOC11143...	[more]
A0A6J1KHJ1	7.3e-42	73.33	Squamosa promoter-binding-like protein OS=Cucurbita maxima OX=3661 GN=LOC1114958...	[more]

BLAST of HG10021234 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G02065.2	1.4e-16	57.14	squamosa promoter binding protein-like 8	[more]
AT1G02065.1	2.4e-16	59.09	squamosa promoter binding protein-like 8	[more]
AT2G42200.1	6.8e-16	52.11	squamosa promoter binding protein-like 9	[more]
AT2G33810.1	1.9e-13	41.54	squamosa promoter binding protein-like 3	[more]
AT3G15270.1	4.1e-13	42.86	squamosa promoter binding protein-like 5	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 12..45
None	No IPR available	PIRSR	PIRSR037575-1	PIRSR037575-1	coord: 75..131 e-value: 2.2E-26 score: 90.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..86
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 18..45
None	No IPR available	PANTHER	PTHR31251:SF151	SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4	coord: 21..130
IPR004333	SBP domain	PFAM	PF03110	SBP	coord: 83..130 e-value: 1.2E-18 score: 67.2
IPR004333	SBP domain	PROSITE	PS51141	ZF_SBP	coord: 80..137 score: 19.084486
IPR036893	SBP domain superfamily	GENE3D	4.10.1100.10		coord: 79..131 e-value: 1.8E-24 score: 87.8
IPR036893	SBP domain superfamily	SUPERFAMILY	103612	SBT domain	coord: 81..131
IPR044817	Squamosa promoter-binding-like protein	PANTHER	PTHR31251	SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4	coord: 21..130

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10021234.1	HG10021234.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009908	flower development
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0046872	metal ion binding