HG10021232 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10021232
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	dof zinc finger protein DOF2.2-like
Location	Chr05: 6789827 .. 6790336 (+)
RNA-Seq Expression	HG10021232
Synteny	HG10021232

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAAGGGGCTTCAAATGAAGATCAAACAAAAGCTTCAACAATAATCCAAAAACAAAAGTGCCCTCGTTGTGAGTCTTCCAACACCAAGTTTTGTTATTACAATAACTACAGCCTTTCACAGCCTCGTTACTTTTGTAAGTCTTGTCGAAGGTATTGGACTCATGGTGGCACTCTCCGTAACGTTCCCATCGGCGGCGGCTCGAGAAAATCCAAACGCCCTAAGACAACGCCTTCTTCTTCCGACACGACCCTAACTCCGCTACCGCCCGTTGCTGGAGGATTGCCTCTTGATCATCTTGCAACTTCTTCTTATTCTAGTGCTGCCTTTATGACGTCCTTGGATGTGGGGGCTTATTCATTTGGAGGATTACCTTGGACTACTCCCATCACCAACACAATTATTCATTCTTCTTCTTCTTCAGGTAATAACCAGAGTTCTAGCCTTCTTCAAAATAGTTCTTCTACTTTGCTTCAAGATCATCTCCCTCCCTTTGCCCATCCTCCCTGA

mRNA sequence

ATGCAAGGGGCTTCAAATGAAGATCAAACAAAAGCTTCAACAATAATCCAAAAACAAAAGTGCCCTCGTTGTGAGTCTTCCAACACCAAGTTTTGTTATTACAATAACTACAGCCTTTCACAGCCTCGTTACTTTTGTAAGTCTTGTCGAAGGTATTGGACTCATGGTGGCACTCTCCGTAACGTTCCCATCGGCGGCGGCTCGAGAAAATCCAAACGCCCTAAGACAACGCCTTCTTCTTCCGACACGACCCTAACTCCGCTACCGCCCGTTGCTGGAGGATTGCCTCTTGATCATCTTGCAACTTCTTCTTATTCTAGTGCTGCCTTTATGACGTCCTTGGATGTGGGGGCTTATTCATTTGGAGGATTACCTTGGACTACTCCCATCACCAACACAATTATTCATTCTTCTTCTTCTTCAGGTAATAACCAGAGTTCTAGCCTTCTTCAAAATAGTTCTTCTACTTTGCTTCAAGATCATCTCCCTCCCTTTGCCCATCCTCCCTGA

Coding sequence (CDS)

ATGCAAGGGGCTTCAAATGAAGATCAAACAAAAGCTTCAACAATAATCCAAAAACAAAAGTGCCCTCGTTGTGAGTCTTCCAACACCAAGTTTTGTTATTACAATAACTACAGCCTTTCACAGCCTCGTTACTTTTGTAAGTCTTGTCGAAGGTATTGGACTCATGGTGGCACTCTCCGTAACGTTCCCATCGGCGGCGGCTCGAGAAAATCCAAACGCCCTAAGACAACGCCTTCTTCTTCCGACACGACCCTAACTCCGCTACCGCCCGTTGCTGGAGGATTGCCTCTTGATCATCTTGCAACTTCTTCTTATTCTAGTGCTGCCTTTATGACGTCCTTGGATGTGGGGGCTTATTCATTTGGAGGATTACCTTGGACTACTCCCATCACCAACACAATTATTCATTCTTCTTCTTCTTCAGGTAATAACCAGAGTTCTAGCCTTCTTCAAAATAGTTCTTCTACTTTGCTTCAAGATCATCTCCCTCCCTTTGCCCATCCTCCCTGA

Protein sequence

MQGASNEDQTKASTIIQKQKCPRCESSNTKFCYYNNYSLSQPRYFCKSCRRYWTHGGTLRNVPIGGGSRKSKRPKTTPSSSDTTLTPLPPVAGGLPLDHLATSSYSSAAFMTSLDVGAYSFGGLPWTTPITNTIIHSSSSSGNNQSSSLLQNSSSTLLQDHLPPFAHPP

Homology

[Close]

BLAST of HG10021232 vs. NCBI nr
Match: XP_038876987.1 (dof zinc finger protein 4-like [Benincasa hispida])

HSP 1 Score: 269.2 bits (687), Expect = 2.3e-68
Identity = 140/174 (80.46%), Postives = 145/174 (83.33%), Query Frame = 0


Query: 1   MQGASNEDQTKASTIIQKQKCPRCESSNTKFCYYNNYSLSQPRYFCKSCRRYWTHGGTLR 60
           MQGA NEDQ K  TIIQKQKCPRCESSNTKFCYYNNYSLSQPRYFCKSCRRYWTHGGTLR
Sbjct: 1   MQGAPNEDQMKGPTIIQKQKCPRCESSNTKFCYYNNYSLSQPRYFCKSCRRYWTHGGTLR 60

Query: 61  NVPIGGGSRKSKRPKTTP-----SSSDTTLTPLPPVAGGLPLDHLATSSYSSAAFMTSLD 120
           NVPIGG SRKSKRPKT P     SSSDTTLTP PP A G PLD  A SSYSSAAF+ SLD
Sbjct: 61  NVPIGGSSRKSKRPKTMPSSSAASSSDTTLTPPPPPARG-PLDLAANSSYSSAAFLPSLD 120

Query: 121 VGAYSFGGLPWTTPITNTIIHSSSSSGNNQSSSLLQNSSSTLLQDHLPPFAHPP 170
           VGAYSFGGLPWTTPITNTIIHSSSS  N  SS  ++N+S   L +HLPPFAHPP
Sbjct: 121 VGAYSFGGLPWTTPITNTIIHSSSSGNNQISSFEIENNSCNFLPNHLPPFAHPP 173

[Close]

BLAST of HG10021232 vs. NCBI nr
Match: XP_011653263.1 (dof zinc finger protein 4 [Cucumis sativus] >KGN64691.1 hypothetical protein Csa_013133 [Cucumis sativus])

HSP 1 Score: 242.7 bits (618), Expect = 2.4e-60
Identity = 141/182 (77.47%), Postives = 151/182 (82.97%), Query Frame = 0


Query: 1   MQGASNEDQTKASTIIQKQKCPRCESSNTKFCYYNNYSLSQPRYFCKSCRRYWTHGGTLR 60
           MQGA NEDQTKASTIIQKQKCPRC+SSNTKFCYYNNYSLSQPRYFCKSCRRYWTHGGTLR
Sbjct: 1   MQGAPNEDQTKASTIIQKQKCPRCDSSNTKFCYYNNYSLSQPRYFCKSCRRYWTHGGTLR 60

Query: 61  NVPIGGGSRKSKRPKTT-----PSSSDTTLTPLPPVAGGL-PLDHLATSSY-SSAAFMTS 120
           NVPIGGGSRKSKRPK+T      SSSDTT T  PP  GG  PLD LATSSY SSAAF++S
Sbjct: 61  NVPIGGGSRKSKRPKSTLLPSSSSSSDTTTTLTPPPPGGSGPLD-LATSSYNSSAAFLSS 120

Query: 121 LDVGA--YSFGGLPWT--TPITNTII--HSSSSSGNNQSSSL-LQNSSSTLLQDHLPPFA 169
           LDVGA   SFGGL WT  TPI NTII  + SSSSGNNQ+SS  ++NSSSTL+ +HL PF 
Sbjct: 121 LDVGAAYSSFGGLAWTTATPINNTIITNNHSSSSGNNQNSSFQIENSSSTLIPNHLSPFH 180

[Close]

BLAST of HG10021232 vs. NCBI nr
Match: XP_008442727.1 (PREDICTED: dof zinc finger protein DOF2.2-like [Cucumis melo] >KAA0057001.1 dof zinc finger protein DOF2.2-like [Cucumis melo var. makuwa] >TYK26428.1 dof zinc finger protein DOF2.2-like [Cucumis melo var. makuwa])

HSP 1 Score: 239.2 bits (609), Expect = 2.6e-59
Identity = 139/182 (76.37%), Postives = 147/182 (80.77%), Query Frame = 0


Query: 1   MQGASNEDQTKASTIIQKQKCPRCESSNTKFCYYNNYSLSQPRYFCKSCRRYWTHGGTLR 60
           MQGA NEDQTKASTIIQKQKCPRC+SSNTKFCYYNNYSLSQPRYFCKSCRRYWTHGGTLR
Sbjct: 1   MQGAPNEDQTKASTIIQKQKCPRCDSSNTKFCYYNNYSLSQPRYFCKSCRRYWTHGGTLR 60

Query: 61  NVPIGGGSRKSKRPKTT--PSSSD-----TTLTPLPPVAGGLPLDHLATSSY-SSAAFMT 120
           NVPIGGGSRKSKRPK+T  PSSS      TTLTP PPV  G PLD    SSY SSAAF+ 
Sbjct: 61  NVPIGGGSRKSKRPKSTLLPSSSSSSDTTTTLTPPPPVGSG-PLDLATASSYNSSAAFLP 120

Query: 121 SLDVGA--YSFGGLPW-TTPITNTII--HSSSSSGNNQSSSL-LQNSSSTLLQDHLPPFA 169
           SLDVGA   SFGGL W TTPI NTII  + SSSSGNNQ+SS  + N+SS LL +HL PF 
Sbjct: 121 SLDVGAAYSSFGGLAWTTTPINNTIITNNHSSSSGNNQNSSFQIDNNSSALLPNHLSPFH 180

[Close]

BLAST of HG10021232 vs. NCBI nr
Match: KAG6583987.1 (Dof zinc finger protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 152.5 bits (384), Expect = 3.2e-33
Identity = 97/181 (53.59%), Postives = 116/181 (64.09%), Query Frame = 0


Query: 1   MQGASNEDQTKASTIIQKQKCPRCESSNTKFCYYNNYSLSQPRYFCKSCRRYWTHGGTLR 60
           MQGA+     +    + +  CPRC+SSNTKFCYYNNYSLSQPRYFCKSCRRYWTHGGTLR
Sbjct: 1   MQGAAAATNEETKPTLIQPNCPRCDSSNTKFCYYNNYSLSQPRYFCKSCRRYWTHGGTLR 60

Query: 61  NVPIGGGSRKSKRPKTTPSSSDTTLTPLPPVAGGLPLDHLATSSYSSAAFMTSL------ 120
           NVPIGGGSRK KRPKT P SS +  T   P +  L LD     SYS A + ++L      
Sbjct: 61  NVPIGGGSRKPKRPKTIPFSSPSPDTLNAPPS--LALDAGGPLSYSGAGYHSTLNESSVA 120

Query: 121 -DVGAYSFGGLPWTTPITNTIIHSSSSSGNNQSSSL-LQNSSSTLLQ-----DHLPPFAH 169
            DVGAY+     WTT I N+I  +S S+GN ++ SL  +N    L+Q     DHLP +A 
Sbjct: 121 VDVGAYN---TMWTT-INNSI--NSCSAGNYENLSLETENECCNLVQNHHDHDHLPSYAR 173

[Close]

BLAST of HG10021232 vs. NCBI nr
Match: XP_022927122.1 (dof zinc finger protein DOF5.3-like [Cucurbita moschata])

HSP 1 Score: 151.8 bits (382), Expect = 5.5e-33
Identity = 95/183 (51.91%), Postives = 114/183 (62.30%), Query Frame = 0


Query: 1   MQGASNEDQTKASTIIQKQKCPRCESSNTKFCYYNNYSLSQPRYFCKSCRRYWTHGGTLR 60
           MQGA+     +    + +  CPRC+SSNTKFCYYNNYSLSQPRYFCKSCRRYWTHGGTLR
Sbjct: 1   MQGAAAATNEETKPTLIQPNCPRCDSSNTKFCYYNNYSLSQPRYFCKSCRRYWTHGGTLR 60

Query: 61  NVPIGGGSRKSKRPKTTPSSSDT--TLTPLPPVA--GGLPLDHL-----ATSSYSSAAFM 120
           NVPIGGGSRK KRPK  P SS +  TL   P +A   G PL +      +T + SS A  
Sbjct: 61  NVPIGGGSRKQKRPKAIPFSSPSPDTLNAPPSLALDAGGPLSYSGAGYHSTLNESSVAVA 120

Query: 121 TSLDVGAYSFGGLPWTTPITNTIIHSSSSSGNNQSSSL-LQNSSSTLLQ-----DHLPPF 169
             +DVGAY+     WTT        +S S+GN ++ SL  +N    L+Q     DHLPP+
Sbjct: 121 VDVDVGAYN---TMWTT-------INSCSAGNYENLSLETENECCNLVQNHHHHDHLPPY 173

[Close]

BLAST of HG10021232 vs. ExPASy Swiss-Prot
Match: O24463 (Dof zinc finger protein PBF OS=Zea mays OX=4577 GN=PBF PE=1 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 5.1e-26
Identity = 55/77 (71.43%), Postives = 60/77 (77.92%), Query Frame = 0


Query: 20  KCPRCESSNTKFCYYNNYSLSQPRYFCKSCRRYWTHGGTLRNVPIGGGSRKSKRPKT--- 79
           KCPRC+S+NTKFCYYNNYS+SQPRYFCK+CRRYWTHGGTLRNVPIGGG RK+K       
Sbjct: 61  KCPRCDSNNTKFCYYNNYSMSQPRYFCKACRRYWTHGGTLRNVPIGGGCRKNKHASRFVL 120

Query: 80  ---TPSSSDTTLTPLPP 91
              T SSS  T  PL P
Sbjct: 121 GSHTSSSSSATYAPLSP 137

[Close]

BLAST of HG10021232 vs. ExPASy Swiss-Prot
Match: Q9FM03 (Dof zinc finger protein DOF5.6 OS=Arabidopsis thaliana OX=3702 GN=DOF5.6 PE=2 SV=2)

HSP 1 Score: 116.7 bits (291), Expect = 2.6e-25
Identity = 65/132 (49.24%), Postives = 83/132 (62.88%), Query Frame = 0


Query: 19  QKCPRCESSNTKFCYYNNYSLSQPRYFCKSCRRYWTHGGTLRNVPIGGGSRKSKRPKTTP 78
           QKCPRCES++TKFCYYNNYSLSQPRYFCK+CRRYWT GGTLRN+P+GGG RK+K+P ++ 
Sbjct: 73  QKCPRCESTHTKFCYYNNYSLSQPRYFCKTCRRYWTKGGTLRNIPVGGGCRKNKKPSSSN 132

Query: 79  SSSDTTLTPLPPVAGGLPLDHLATSSYSSAAFMTSLDVGAYSFGGL--PWTTPITNTIIH 138
           SSS T+    P          L   ++S   +  S  +G   FGG+   ++TP    +  
Sbjct: 133 SSSSTSSGKKPSNIVTANTSDLMALAHSHQNYQHS-PLGFSHFGGMMGSYSTPEHGNVGF 192

Query: 139 SSSSSGNNQSSS 149
             S  G   S S
Sbjct: 193 LESKYGGLLSQS 203

[Close]

BLAST of HG10021232 vs. ExPASy Swiss-Prot
Match: Q9SVC5 (Dof zinc finger protein DOF3.5 OS=Arabidopsis thaliana OX=3702 GN=DOF3.5 PE=3 SV=1)

HSP 1 Score: 114.4 bits (285), Expect = 1.3e-24
Identity = 53/73 (72.60%), Postives = 60/73 (82.19%), Query Frame = 0


Query: 21 CPRCESSNTKFCYYNNYSLSQPRYFCKSCRRYWTHGGTLRNVPIGGGSRKSKRPKTTPSS 80
          CPRC SSNTKFCYYNNYSL+QPRYFCK CRRYWT GG+LRNVP+GGG RKS+RPK+  SS
Sbjct: 27 CPRCGSSNTKFCYYNNYSLTQPRYFCKGCRRYWTKGGSLRNVPVGGGCRKSRRPKS--SS 86

Query: 81 SDTTLTPLPPVAG 94
           + T T L   +G
Sbjct: 87 GNNTKTSLTANSG 97

[Close]

BLAST of HG10021232 vs. ExPASy Swiss-Prot
Match: Q8LE43 (Dof zinc finger protein DOF2.1 OS=Arabidopsis thaliana OX=3702 GN=DOF2.1 PE=2 SV=2)

HSP 1 Score: 113.6 bits (283), Expect = 2.2e-24
Identity = 49/66 (74.24%), Postives = 56/66 (84.85%), Query Frame = 0


Query: 17  QKQKCPRCESSNTKFCYYNNYSLSQPRYFCKSCRRYWTHGGTLRNVPIGGGSRKSKRPKT 76
           + Q CPRCES NTKFCYYNNYSLSQPRYFCKSCRRYWT GGTLRNVP+GGG R++KR  +
Sbjct: 46  EAQNCPRCESPNTKFCYYNNYSLSQPRYFCKSCRRYWTKGGTLRNVPVGGGCRRNKRSSS 105

Query: 77  TPSSSD 83
           +  S +
Sbjct: 106 SAFSKN 111

[Close]

BLAST of HG10021232 vs. ExPASy Swiss-Prot
Match: Q9LSL6 (Dof zinc finger protein DOF5.7 OS=Arabidopsis thaliana OX=3702 GN=DOF5.7 PE=2 SV=1)

HSP 1 Score: 113.6 bits (283), Expect = 2.2e-24
Identity = 56/88 (63.64%), Postives = 65/88 (73.86%), Query Frame = 0


Query: 1   MQGASNEDQTKASTIIQKQ---KCPRCESSNTKFCYYNNYSLSQPRYFCKSCRRYWTHGG 60
           + G S   +  +S++ Q Q   KCPRC S NTKFCYYNNYSLSQPR+FCKSCRRYWT GG
Sbjct: 20  ISGTSQTKKPPSSSVAQDQQNLKCPRCNSPNTKFCYYNNYSLSQPRHFCKSCRRYWTRGG 79

Query: 61  TLRNVPIGGGSRKSKRPKTTPSSSDTTL 86
            LRNVPIGGG RK+K+    P+SS  TL
Sbjct: 80  ALRNVPIGGGCRKTKK-SIKPNSSMNTL 106

[Close]

BLAST of HG10021232 vs. ExPASy TrEMBL
Match: A0A0A0LXF4 (Dof-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G074960 PE=4 SV=1)

HSP 1 Score: 242.7 bits (618), Expect = 1.1e-60
Identity = 141/182 (77.47%), Postives = 151/182 (82.97%), Query Frame = 0


Query: 1   MQGASNEDQTKASTIIQKQKCPRCESSNTKFCYYNNYSLSQPRYFCKSCRRYWTHGGTLR 60
           MQGA NEDQTKASTIIQKQKCPRC+SSNTKFCYYNNYSLSQPRYFCKSCRRYWTHGGTLR
Sbjct: 1   MQGAPNEDQTKASTIIQKQKCPRCDSSNTKFCYYNNYSLSQPRYFCKSCRRYWTHGGTLR 60

Query: 61  NVPIGGGSRKSKRPKTT-----PSSSDTTLTPLPPVAGGL-PLDHLATSSY-SSAAFMTS 120
           NVPIGGGSRKSKRPK+T      SSSDTT T  PP  GG  PLD LATSSY SSAAF++S
Sbjct: 61  NVPIGGGSRKSKRPKSTLLPSSSSSSDTTTTLTPPPPGGSGPLD-LATSSYNSSAAFLSS 120

Query: 121 LDVGA--YSFGGLPWT--TPITNTII--HSSSSSGNNQSSSL-LQNSSSTLLQDHLPPFA 169
           LDVGA   SFGGL WT  TPI NTII  + SSSSGNNQ+SS  ++NSSSTL+ +HL PF 
Sbjct: 121 LDVGAAYSSFGGLAWTTATPINNTIITNNHSSSSGNNQNSSFQIENSSSTLIPNHLSPFH 180

[Close]

BLAST of HG10021232 vs. ExPASy TrEMBL
Match: A0A5A7UU19 (Dof zinc finger protein DOF2.2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold861G00920 PE=4 SV=1)

HSP 1 Score: 239.2 bits (609), Expect = 1.3e-59
Identity = 139/182 (76.37%), Postives = 147/182 (80.77%), Query Frame = 0


Query: 1   MQGASNEDQTKASTIIQKQKCPRCESSNTKFCYYNNYSLSQPRYFCKSCRRYWTHGGTLR 60
           MQGA NEDQTKASTIIQKQKCPRC+SSNTKFCYYNNYSLSQPRYFCKSCRRYWTHGGTLR
Sbjct: 1   MQGAPNEDQTKASTIIQKQKCPRCDSSNTKFCYYNNYSLSQPRYFCKSCRRYWTHGGTLR 60

Query: 61  NVPIGGGSRKSKRPKTT--PSSSD-----TTLTPLPPVAGGLPLDHLATSSY-SSAAFMT 120
           NVPIGGGSRKSKRPK+T  PSSS      TTLTP PPV  G PLD    SSY SSAAF+ 
Sbjct: 61  NVPIGGGSRKSKRPKSTLLPSSSSSSDTTTTLTPPPPVGSG-PLDLATASSYNSSAAFLP 120

Query: 121 SLDVGA--YSFGGLPW-TTPITNTII--HSSSSSGNNQSSSL-LQNSSSTLLQDHLPPFA 169
           SLDVGA   SFGGL W TTPI NTII  + SSSSGNNQ+SS  + N+SS LL +HL PF 
Sbjct: 121 SLDVGAAYSSFGGLAWTTTPINNTIITNNHSSSSGNNQNSSFQIDNNSSALLPNHLSPFH 180

[Close]

BLAST of HG10021232 vs. ExPASy TrEMBL
Match: A0A1S3B6E2 (dof zinc finger protein DOF2.2-like OS=Cucumis melo OX=3656 GN=LOC103486513 PE=4 SV=1)

HSP 1 Score: 239.2 bits (609), Expect = 1.3e-59
Identity = 139/182 (76.37%), Postives = 147/182 (80.77%), Query Frame = 0


Query: 1   MQGASNEDQTKASTIIQKQKCPRCESSNTKFCYYNNYSLSQPRYFCKSCRRYWTHGGTLR 60
           MQGA NEDQTKASTIIQKQKCPRC+SSNTKFCYYNNYSLSQPRYFCKSCRRYWTHGGTLR
Sbjct: 1   MQGAPNEDQTKASTIIQKQKCPRCDSSNTKFCYYNNYSLSQPRYFCKSCRRYWTHGGTLR 60

Query: 61  NVPIGGGSRKSKRPKTT--PSSSD-----TTLTPLPPVAGGLPLDHLATSSY-SSAAFMT 120
           NVPIGGGSRKSKRPK+T  PSSS      TTLTP PPV  G PLD    SSY SSAAF+ 
Sbjct: 61  NVPIGGGSRKSKRPKSTLLPSSSSSSDTTTTLTPPPPVGSG-PLDLATASSYNSSAAFLP 120

Query: 121 SLDVGA--YSFGGLPW-TTPITNTII--HSSSSSGNNQSSSL-LQNSSSTLLQDHLPPFA 169
           SLDVGA   SFGGL W TTPI NTII  + SSSSGNNQ+SS  + N+SS LL +HL PF 
Sbjct: 121 SLDVGAAYSSFGGLAWTTTPINNTIITNNHSSSSGNNQNSSFQIDNNSSALLPNHLSPFH 180

[Close]

BLAST of HG10021232 vs. ExPASy TrEMBL
Match: A0A6J1EG92 (dof zinc finger protein DOF5.3-like OS=Cucurbita moschata OX=3662 GN=LOC111434062 PE=4 SV=1)

HSP 1 Score: 151.8 bits (382), Expect = 2.6e-33
Identity = 95/183 (51.91%), Postives = 114/183 (62.30%), Query Frame = 0


Query: 1   MQGASNEDQTKASTIIQKQKCPRCESSNTKFCYYNNYSLSQPRYFCKSCRRYWTHGGTLR 60
           MQGA+     +    + +  CPRC+SSNTKFCYYNNYSLSQPRYFCKSCRRYWTHGGTLR
Sbjct: 1   MQGAAAATNEETKPTLIQPNCPRCDSSNTKFCYYNNYSLSQPRYFCKSCRRYWTHGGTLR 60

Query: 61  NVPIGGGSRKSKRPKTTPSSSDT--TLTPLPPVA--GGLPLDHL-----ATSSYSSAAFM 120
           NVPIGGGSRK KRPK  P SS +  TL   P +A   G PL +      +T + SS A  
Sbjct: 61  NVPIGGGSRKQKRPKAIPFSSPSPDTLNAPPSLALDAGGPLSYSGAGYHSTLNESSVAVA 120

Query: 121 TSLDVGAYSFGGLPWTTPITNTIIHSSSSSGNNQSSSL-LQNSSSTLLQ-----DHLPPF 169
             +DVGAY+     WTT        +S S+GN ++ SL  +N    L+Q     DHLPP+
Sbjct: 121 VDVDVGAYN---TMWTT-------INSCSAGNYENLSLETENECCNLVQNHHHHDHLPPY 173

[Close]

BLAST of HG10021232 vs. ExPASy TrEMBL
Match: A0A6J1KNK3 (dof zinc finger protein DOF5.3-like OS=Cucurbita maxima OX=3661 GN=LOC111495797 PE=4 SV=1)

HSP 1 Score: 142.5 bits (358), Expect = 1.6e-30
Identity = 92/163 (56.44%), Postives = 108/163 (66.26%), Query Frame = 0


Query: 1   MQG--ASNEDQTKASTIIQKQKCPRCESSNTKFCYYNNYSLSQPRYFCKSCRRYWTHGGT 60
           MQG  A++ ++TK ST+IQ   CPRC+SSNTKFC+YNNYSLSQPRYFCKSCRRYWTHGGT
Sbjct: 1   MQGAAAASNEETK-STLIQ-PNCPRCDSSNTKFCHYNNYSLSQPRYFCKSCRRYWTHGGT 60

Query: 61  LRNVPIGGGSRKSKRPKTTPSSSDT--TLTPLPPVA--GGLPLDHLATSSYS-----SAA 120
           LRNVPIGGGSRK KRPKT P SS +  TL   P +A   G PL +     +S     S A
Sbjct: 61  LRNVPIGGGSRKPKRPKTIPFSSPSPDTLNAPPSLALHAGGPLSYSGAGYHSTLNEPSVA 120

Query: 121 FMTSLDVGAYSFG----------GLPWTTPITNTIIHSSSSSG 143
               +DVGAY+FG             WTT I N+I  +S S+G
Sbjct: 121 VAVDVDVGAYAFGLSQSFGHGDHNTMWTT-INNSI--NSCSAG 158

[Close]

BLAST of HG10021232 vs. TAIR 10
Match: AT5G62940.1 (Dof-type zinc finger DNA-binding family protein )

HSP 1 Score: 116.7 bits (291), Expect = 1.8e-26
Identity = 65/132 (49.24%), Postives = 83/132 (62.88%), Query Frame = 0


Query: 19  QKCPRCESSNTKFCYYNNYSLSQPRYFCKSCRRYWTHGGTLRNVPIGGGSRKSKRPKTTP 78
           QKCPRCES++TKFCYYNNYSLSQPRYFCK+CRRYWT GGTLRN+P+GGG RK+K+P ++ 
Sbjct: 73  QKCPRCESTHTKFCYYNNYSLSQPRYFCKTCRRYWTKGGTLRNIPVGGGCRKNKKPSSSN 132

Query: 79  SSSDTTLTPLPPVAGGLPLDHLATSSYSSAAFMTSLDVGAYSFGGL--PWTTPITNTIIH 138
           SSS T+    P          L   ++S   +  S  +G   FGG+   ++TP    +  
Sbjct: 133 SSSSTSSGKKPSNIVTANTSDLMALAHSHQNYQHS-PLGFSHFGGMMGSYSTPEHGNVGF 192

Query: 139 SSSSSGNNQSSS 149
             S  G   S S
Sbjct: 193 LESKYGGLLSQS 203

[Close]

BLAST of HG10021232 vs. TAIR 10
Match: AT3G52440.1 (Dof-type zinc finger DNA-binding family protein )

HSP 1 Score: 114.4 bits (285), Expect = 9.0e-26
Identity = 53/73 (72.60%), Postives = 60/73 (82.19%), Query Frame = 0


Query: 21 CPRCESSNTKFCYYNNYSLSQPRYFCKSCRRYWTHGGTLRNVPIGGGSRKSKRPKTTPSS 80
          CPRC SSNTKFCYYNNYSL+QPRYFCK CRRYWT GG+LRNVP+GGG RKS+RPK+  SS
Sbjct: 27 CPRCGSSNTKFCYYNNYSLTQPRYFCKGCRRYWTKGGSLRNVPVGGGCRKSRRPKS--SS 86

Query: 81 SDTTLTPLPPVAG 94
           + T T L   +G
Sbjct: 87 GNNTKTSLTANSG 97

[Close]

BLAST of HG10021232 vs. TAIR 10
Match: AT2G28510.1 (Dof-type zinc finger DNA-binding family protein )

HSP 1 Score: 113.6 bits (283), Expect = 1.5e-25
Identity = 49/66 (74.24%), Postives = 56/66 (84.85%), Query Frame = 0


Query: 17  QKQKCPRCESSNTKFCYYNNYSLSQPRYFCKSCRRYWTHGGTLRNVPIGGGSRKSKRPKT 76
           + Q CPRCES NTKFCYYNNYSLSQPRYFCKSCRRYWT GGTLRNVP+GGG R++KR  +
Sbjct: 46  EAQNCPRCESPNTKFCYYNNYSLSQPRYFCKSCRRYWTKGGTLRNVPVGGGCRRNKRSSS 105

Query: 77  TPSSSD 83
           +  S +
Sbjct: 106 SAFSKN 111

[Close]

BLAST of HG10021232 vs. TAIR 10
Match: AT5G65590.1 (Dof-type zinc finger DNA-binding family protein )

HSP 1 Score: 113.6 bits (283), Expect = 1.5e-25
Identity = 56/88 (63.64%), Postives = 65/88 (73.86%), Query Frame = 0


Query: 1   MQGASNEDQTKASTIIQKQ---KCPRCESSNTKFCYYNNYSLSQPRYFCKSCRRYWTHGG 60
           + G S   +  +S++ Q Q   KCPRC S NTKFCYYNNYSLSQPR+FCKSCRRYWT GG
Sbjct: 20  ISGTSQTKKPPSSSVAQDQQNLKCPRCNSPNTKFCYYNNYSLSQPRHFCKSCRRYWTRGG 79

Query: 61  TLRNVPIGGGSRKSKRPKTTPSSSDTTL 86
            LRNVPIGGG RK+K+    P+SS  TL
Sbjct: 80  ALRNVPIGGGCRKTKK-SIKPNSSMNTL 106

[Close]

BLAST of HG10021232 vs. TAIR 10
Match: AT5G60200.1 (TARGET OF MONOPTEROS 6 )

HSP 1 Score: 113.2 bits (282), Expect = 2.0e-25
Identity = 52/88 (59.09%), Postives = 64/88 (72.73%), Query Frame = 0


Query: 20  KCPRCESSNTKFCYYNNYSLSQPRYFCKSCRRYWTHGGTLRNVPIGGGSRKSKRPKTTPS 79
           +CPRC+S+NTKFCYYNNYSL+QPRYFCKSCRRYWT GGTLRN+P+GGG RK+KR  T+ +
Sbjct: 56  RCPRCDSTNTKFCYYNNYSLTQPRYFCKSCRRYWTKGGTLRNIPVGGGCRKNKR-STSSA 115

Query: 80  SSDTTLTPLPPVAGGLPLDHLATSSYSS 108
           +     TP P    G        + YS+
Sbjct: 116 ARSLRTTPEPASHDGKVFSAAGFNGYSN 142

The following BLAST results are available for this feature:

BLAST of HG10021232 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038876987.1	2.3e-68	80.46	dof zinc finger protein 4-like [Benincasa hispida]	[more]
XP_011653263.1	2.4e-60	77.47	dof zinc finger protein 4 [Cucumis sativus] >KGN64691.1 hypothetical protein Csa...	[more]
XP_008442727.1	2.6e-59	76.37	PREDICTED: dof zinc finger protein DOF2.2-like [Cucumis melo] >KAA0057001.1 dof ...	[more]
KAG6583987.1	3.2e-33	53.59	Dof zinc finger protein, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022927122.1	5.5e-33	51.91	dof zinc finger protein DOF5.3-like [Cucurbita moschata]	[more]

BLAST of HG10021232 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O24463	5.1e-26	71.43	Dof zinc finger protein PBF OS=Zea mays OX=4577 GN=PBF PE=1 SV=1	[more]
Q9FM03	2.6e-25	49.24	Dof zinc finger protein DOF5.6 OS=Arabidopsis thaliana OX=3702 GN=DOF5.6 PE=2 SV...	[more]
Q9SVC5	1.3e-24	72.60	Dof zinc finger protein DOF3.5 OS=Arabidopsis thaliana OX=3702 GN=DOF3.5 PE=3 SV...	[more]
Q8LE43	2.2e-24	74.24	Dof zinc finger protein DOF2.1 OS=Arabidopsis thaliana OX=3702 GN=DOF2.1 PE=2 SV...	[more]
Q9LSL6	2.2e-24	63.64	Dof zinc finger protein DOF5.7 OS=Arabidopsis thaliana OX=3702 GN=DOF5.7 PE=2 SV...	[more]

BLAST of HG10021232 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LXF4	1.1e-60	77.47	Dof-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G074960 PE...	[more]
A0A5A7UU19	1.3e-59	76.37	Dof zinc finger protein DOF2.2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5...	[more]
A0A1S3B6E2	1.3e-59	76.37	dof zinc finger protein DOF2.2-like OS=Cucumis melo OX=3656 GN=LOC103486513 PE=4...	[more]
A0A6J1EG92	2.6e-33	51.91	dof zinc finger protein DOF5.3-like OS=Cucurbita moschata OX=3662 GN=LOC11143406...	[more]
A0A6J1KNK3	1.6e-30	56.44	dof zinc finger protein DOF5.3-like OS=Cucurbita maxima OX=3661 GN=LOC111495797 ...	[more]

BLAST of HG10021232 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G62940.1	1.8e-26	49.24	Dof-type zinc finger DNA-binding family protein	[more]
AT3G52440.1	9.0e-26	72.60	Dof-type zinc finger DNA-binding family protein	[more]
AT2G28510.1	1.5e-25	74.24	Dof-type zinc finger DNA-binding family protein	[more]
AT5G65590.1	1.5e-25	63.64	Dof-type zinc finger DNA-binding family protein	[more]
AT5G60200.1	2.0e-25	59.09	TARGET OF MONOPTEROS 6	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003851	Zinc finger, Dof-type	PFAM	PF02701	zf-Dof	coord: 18..73 e-value: 8.3E-34 score: 115.5
IPR003851	Zinc finger, Dof-type	PROSITE	PS01361	ZF_DOF_1	coord: 21..57
IPR003851	Zinc finger, Dof-type	PROSITE	PS50884	ZF_DOF_2	coord: 19..73 score: 28.919184
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 72..87
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 137..169
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 63..91
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 137..160
None	No IPR available	PANTHER	PTHR31992:SF178	DOF ZINC FINGER PROTEIN DOF5.7	coord: 10..153
None	No IPR available	PANTHER	PTHR31992	DOF ZINC FINGER PROTEIN DOF1.4-RELATED	coord: 10..153

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10021232.1	HG10021232.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding