HG10021120 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10021120
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	Thioredoxin
Location	Chr05: 5567339 .. 5568838 (-)
RNA-Seq Expression	HG10021120
Synteny	HG10021120

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGGGTCAAGAGCAGAGTCGACAGACTAGGGTTGTGAAGATTGAATCAATGGAATCGTGGAATTTCTACTTGACCAAAGCCACTCATCAAGATTCTCTTGTATGTACCCTTTTTTATTCTCTTGTTCCTATTGAAATTGAGGAATAGTGCAGATTGGATGAAATGGTTATGAGGTATAATGAAAGATTCGCTCTATTTTGATGGGAAATTGGTTTACAATTCGTTCTAATTAACTAGGATGGAAGTTTCAAGTTTTCATTTGTTTATGTGATTTTTTGTAGGTTGTTGTGCACTTCACTGCTTCTTGGTGTATGCCTTCGGTTGCCATGAATCCATTCTTTGAAGAACTGGCATTTAACTACCCGGATGTTCTGTTTCTCACTGTAGATGTTGATGAGGTTAAGGTAACAAGTCAGGTTTGAGAGTGATTTTTAAATGATTAAGATAATTAAAATCACCCCATAACATGCTTTTAATCTATGATTAAAGGTATGTTTGGGAGTGATTTTGAAGGTTCAAAATCACTCCAACCCCAAATGTCCAAAATCATGATCGATATGTCATTACTCGTATCTAGGAACTTACCTGCTTTCCAGACTCCATGCTTTCAACTTTCTTTCTTCTCTAAGTAATGCAAACAAGTCATTGTATATAAAGATCATTGGTTTAACAACTAACCATATAGGTGGTTGTTTTTTGTTGTTTGGGTTCTACAATTCAAATGATTATAAGGTGAAGCTAACAGAGTTTAGGAAGAGGAAGTCTGATGGAGAAAGAATGAGTGAAGAAGAGAGAAATCTTACTTGTTTGTTGCAGGTGAAGTTGTTAAGCAGAGTATCAGACTATATCAGTAACTCTTTTTTAATGAAAATTGATGCTTCTTTTTCTTCCTTTTCATTCATAAACTTAGATAGTGAAAAAGAGAGAAATCTTATCTGAGGTGCTGGTTTTGCGAAAAATGTTTCAATCGCGCACTTTAGCATGTGCCCGACTTCTGAGTGAAGCTTTACACAAGAAAGCACCTTGCTTATGCGCATTTTAAAACACTGGAAGGGCATATGGTTATTAGATTCCAGTTCCTAGATTCTGATTATGAAATAGGAGCTTTCCAACATAGGCTTTATATGTTTAAGAGATATAGACGAGCAAGCAGTTGGGCTTGTCAATCATACTCATTTCAGTGAACTTCTACTCTGAATTGCACTGATAATCATCAAAGTCTTTCAAAACAGGAGAATCATGCTATAAAAATAACTGATGGTATGATATTGATAAGTTATGTCCCTGACTGATAGCCGAGAGAGACTATTACATCATTTCTTCTATGTGATTTCCATTTTCTCATGTTAGGAAGTGGCTGCTAAACTGGAGATAAAGGCAATGCCAACTTTCTTGGTAATGAAAAATGGTACTCAGATTGACAAGCTTGTGGGTGCAAATCCAGAAGAGATGAGGAAAAGGATAGGAGCATATGTTGAGGCTATACATGTTGCATAA

mRNA sequence

ATGGAGGGTCAAGAGCAGAGTCGACAGACTAGGGTTGTGAAGATTGAATCAATGGAATCGTGGAATTTCTACTTGACCAAAGCCACTCATCAAGATTCTCTTGTTGTTGTGCACTTCACTGCTTCTTGGTGTATGCCTTCGGTTGCCATGAATCCATTCTTTGAAGAACTGGCATTTAACTACCCGGATGTTCTGTTTCTCACTGTAGATGTTGATGAGGTTAAGGTGAAGCTAACAGAGTTTAGGAAGAGGAAGTCTGATGGAGAAAGAATGAGTGAAGAAGAGAGAAATCTTACTTGTTTGTTGCAGGAAGTGGCTGCTAAACTGGAGATAAAGGCAATGCCAACTTTCTTGGTAATGAAAAATGGTACTCAGATTGACAAGCTTGTGGGTGCAAATCCAGAAGAGATGAGGAAAAGGATAGGAGCATATGTTGAGGCTATACATGTTGCATAA

Coding sequence (CDS)

ATGGAGGGTCAAGAGCAGAGTCGACAGACTAGGGTTGTGAAGATTGAATCAATGGAATCGTGGAATTTCTACTTGACCAAAGCCACTCATCAAGATTCTCTTGTTGTTGTGCACTTCACTGCTTCTTGGTGTATGCCTTCGGTTGCCATGAATCCATTCTTTGAAGAACTGGCATTTAACTACCCGGATGTTCTGTTTCTCACTGTAGATGTTGATGAGGTTAAGGTGAAGCTAACAGAGTTTAGGAAGAGGAAGTCTGATGGAGAAAGAATGAGTGAAGAAGAGAGAAATCTTACTTGTTTGTTGCAGGAAGTGGCTGCTAAACTGGAGATAAAGGCAATGCCAACTTTCTTGGTAATGAAAAATGGTACTCAGATTGACAAGCTTGTGGGTGCAAATCCAGAAGAGATGAGGAAAAGGATAGGAGCATATGTTGAGGCTATACATGTTGCATAA

Protein sequence

MEGQEQSRQTRVVKIESMESWNFYLTKATHQDSLVVVHFTASWCMPSVAMNPFFEELAFNYPDVLFLTVDVDEVKVKLTEFRKRKSDGERMSEEERNLTCLLQEVAAKLEIKAMPTFLVMKNGTQIDKLVGANPEEMRKRIGAYVEAIHVA

Homology

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BLAST of HG10021120 vs. NCBI nr
Match: XP_038895316.1 (thioredoxin-like protein CXXS1 [Benincasa hispida])

HSP 1 Score: 214.9 bits (546), Expect = 4.7e-52
Identity = 117/152 (76.97%), Postives = 119/152 (78.29%), Query Frame = 0


Query: 1   MEG-QEQSRQTRVVKIESMESWNFYLTKATHQDSLVVVHFTASWCMPSVAMNPFFEELAF 60
           MEG QEQ RQ RVV IESMESWNFYLTKATHQDSLVVVHFTASWCMPSVAMNPFFEELAF
Sbjct: 1   MEGQQEQWRQIRVVNIESMESWNFYLTKATHQDSLVVVHFTASWCMPSVAMNPFFEELAF 60

Query: 61  NYPDVLFLTVDVDEVKVKLTEFRKRKSDGERMSEEERNLTCLLQEVAAKLEIKAMPTFLV 120
           NYPDVLFL+VDVDEVK                            EVAAKLEIKAMPTFLV
Sbjct: 61  NYPDVLFLSVDVDEVK----------------------------EVAAKLEIKAMPTFLV 120

Query: 121 MKNGTQIDKLVGANPEEMRKRIGAYVEAIHVA 152
           MKNGTQIDKLVGANPEE+RKRIGAY EAIHVA
Sbjct: 121 MKNGTQIDKLVGANPEEIRKRIGAYAEAIHVA 124

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BLAST of HG10021120 vs. NCBI nr
Match: XP_008441601.1 (PREDICTED: thioredoxin-like protein CXXS1 [Cucumis melo] >KAA0056899.1 thioredoxin-like protein CXXS1 [Cucumis melo var. makuwa] >TYJ99402.1 thioredoxin-like protein CXXS1 [Cucumis melo var. makuwa])

HSP 1 Score: 209.1 bits (531), Expect = 2.6e-50
Identity = 110/151 (72.85%), Postives = 116/151 (76.82%), Query Frame = 0


Query: 1   MEGQEQSRQTRVVKIESMESWNFYLTKATHQDSLVVVHFTASWCMPSVAMNPFFEELAFN 60
           MEGQ+Q R+TRVVKIESMESWNFYLTKA  QDSL+VVHFTASWCMPSVAMNPFFEELA  
Sbjct: 1   MEGQDQWRRTRVVKIESMESWNFYLTKAIQQDSLIVVHFTASWCMPSVAMNPFFEELALT 60

Query: 61  YPDVLFLTVDVDEVKVKLTEFRKRKSDGERMSEEERNLTCLLQEVAAKLEIKAMPTFLVM 120
           YPDVLFLTVDVDEVK                            EVAAKLEIKAMPTFL+M
Sbjct: 61  YPDVLFLTVDVDEVK----------------------------EVAAKLEIKAMPTFLMM 120

Query: 121 KNGTQIDKLVGANPEEMRKRIGAYVEAIHVA 152
           KNGTQIDKLVGANPEE+RKRIGAY E +HVA
Sbjct: 121 KNGTQIDKLVGANPEEIRKRIGAYTETVHVA 123

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BLAST of HG10021120 vs. NCBI nr
Match: XP_004145093.1 (thioredoxin-like protein CXXS1 [Cucumis sativus] >KGN64577.1 hypothetical protein Csa_013732 [Cucumis sativus])

HSP 1 Score: 200.7 bits (509), Expect = 9.2e-48
Identity = 107/151 (70.86%), Postives = 113/151 (74.83%), Query Frame = 0


Query: 1   MEGQEQSRQTRVVKIESMESWNFYLTKATHQDSLVVVHFTASWCMPSVAMNPFFEELAFN 60
           MEGQ+Q ++TRVVKIESMESWNF LTKA  QDSL+VVHFTASWCMPSVAMNPFFEELA  
Sbjct: 1   MEGQDQWQRTRVVKIESMESWNFNLTKAIQQDSLIVVHFTASWCMPSVAMNPFFEELALT 60

Query: 61  YPDVLFLTVDVDEVKVKLTEFRKRKSDGERMSEEERNLTCLLQEVAAKLEIKAMPTFLVM 120
           YPDVLFLTVDVDEVK                            EVAAKLEIKAMPTFLVM
Sbjct: 61  YPDVLFLTVDVDEVK----------------------------EVAAKLEIKAMPTFLVM 120

Query: 121 KNGTQIDKLVGANPEEMRKRIGAYVEAIHVA 152
           KNG  IDKLVGANPEE+RKRIGAY E +HVA
Sbjct: 121 KNGNLIDKLVGANPEEIRKRIGAYTETVHVA 123

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BLAST of HG10021120 vs. NCBI nr
Match: XP_022954644.1 (thioredoxin-like protein CXXS1 [Cucurbita moschata] >XP_022994497.1 thioredoxin-like protein CXXS1 [Cucurbita maxima])

HSP 1 Score: 197.2 bits (500), Expect = 1.0e-46
Identity = 106/151 (70.20%), Postives = 112/151 (74.17%), Query Frame = 0


Query: 1   MEGQEQSRQTRVVKIESMESWNFYLTKATHQDSLVVVHFTASWCMPSVAMNPFFEELAFN 60
           MEGQEQ RQ RVVKIESMESWN ++TKA  QDSL+VVHFTASWCMPSVAMNPFFEELAFN
Sbjct: 1   MEGQEQWRQIRVVKIESMESWNSFVTKAAQQDSLIVVHFTASWCMPSVAMNPFFEELAFN 60

Query: 61  YPDVLFLTVDVDEVKVKLTEFRKRKSDGERMSEEERNLTCLLQEVAAKLEIKAMPTFLVM 120
           YPD LFLTVDVDEVK                            EVAAK+EIKAMPTFL+M
Sbjct: 61  YPDALFLTVDVDEVK----------------------------EVAAKMEIKAMPTFLLM 120

Query: 121 KNGTQIDKLVGANPEEMRKRIGAYVEAIHVA 152
           KNGTQI KLVGANPEE+RK I A VE IHVA
Sbjct: 121 KNGTQIGKLVGANPEEVRKMIDANVETIHVA 123

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BLAST of HG10021120 vs. NCBI nr
Match: XP_023542798.1 (thioredoxin-like protein CXXS1 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023542799.1 thioredoxin-like protein CXXS1 isoform X2 [Cucurbita pepo subsp. pepo] >KAG6573217.1 Thioredoxin-like protein CXXS1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 194.5 bits (493), Expect = 6.6e-46
Identity = 105/151 (69.54%), Postives = 111/151 (73.51%), Query Frame = 0


Query: 1   MEGQEQSRQTRVVKIESMESWNFYLTKATHQDSLVVVHFTASWCMPSVAMNPFFEELAFN 60
           MEGQEQ RQ RVVKIESMESWN ++TKA  Q SL+VVHFTASWCMPSVAMNPFFEELAFN
Sbjct: 1   MEGQEQWRQIRVVKIESMESWNSFVTKAAQQGSLIVVHFTASWCMPSVAMNPFFEELAFN 60

Query: 61  YPDVLFLTVDVDEVKVKLTEFRKRKSDGERMSEEERNLTCLLQEVAAKLEIKAMPTFLVM 120
           YPD LFLTVDVDEVK                            EVAAK+EIKAMPTFL+M
Sbjct: 61  YPDALFLTVDVDEVK----------------------------EVAAKMEIKAMPTFLLM 120

Query: 121 KNGTQIDKLVGANPEEMRKRIGAYVEAIHVA 152
           KNGTQI KLVGANPEE+RK I A VE IHVA
Sbjct: 121 KNGTQIGKLVGANPEEVRKMIDANVETIHVA 123

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BLAST of HG10021120 vs. ExPASy Swiss-Prot
Match: Q8LDI5 (Thioredoxin-like protein CXXS1 OS=Arabidopsis thaliana OX=3702 GN=CXXS1 PE=2 SV=2)

HSP 1 Score: 143.7 bits (361), Expect = 1.7e-33
Identity = 74/144 (51.39%), Postives = 97/144 (67.36%), Query Frame = 0


Query: 11  RVVKIESMESWNFYLTKATHQDSLVVVHFTASWCMPSVAMNPFFEELAFNYPDVLFLTVD 70
           RVVKI+S ESWNFY+++A +Q+  +V HFTA WC+PSV MN FFEELAFNY D LFL VD
Sbjct: 3   RVVKIDSAESWNFYVSQAKNQNCPIVAHFTALWCIPSVFMNSFFEELAFNYKDALFLIVD 62

Query: 71  VDEVKVKLTEFRKRKSDGERMSEEERNLTCLLQEVAAKLEIKAMPTFLVMKNGTQIDKLV 130
           VDEVK                            EVA++LE+KAMPTFL +K+G  +DKLV
Sbjct: 63  VDEVK----------------------------EVASQLEVKAMPTFLFLKDGNAMDKLV 118

Query: 131 GANPEEMRKRIGAYVEA---IHVA 152
           GANP+E++KR+  +V++   +H+A
Sbjct: 123 GANPDEIKKRVDGFVQSSRVVHIA 118

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BLAST of HG10021120 vs. ExPASy Swiss-Prot
Match: Q0J9V5 (Thioredoxin-like protein CXXS1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os04g0629500 PE=2 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 5.3e-22
Identity = 59/152 (38.82%), Postives = 91/152 (59.87%), Query Frame = 0


Query: 1   MEGQEQS--RQTRVVKIESMESWNFYLTKATHQDSLVVVHFTASWCMPSVAMNPFFEELA 60
           ME Q+Q     ++VVK+E  ESW+ ++ +A+++   VV HF ASWC+ S++MN  FEELA
Sbjct: 1   MEIQQQKGVGNSKVVKVEKEESWDLFVNQASNEGHPVVAHFGASWCVTSLSMNYKFEELA 60

Query: 61  FNYPDVLFLTVDVDEVKVKLTEFRKRKSDGERMSEEERNLTCLLQEVAAKLEIKAMPTFL 120
             +P++LFL VDVD+V                            Q V++KL +KAMPTF 
Sbjct: 61  QTHPEILFLYVDVDDV----------------------------QSVSSKLGVKAMPTFF 120

Query: 121 VMKNGTQIDKLVGANPEEMRKRIGAYVEAIHV 151
           ++K+   ++K+VGANP+E++K + A  E+  V
Sbjct: 121 LIKDKEVVNKIVGANPDEVKKMVDASAESFGV 124

[Close]

BLAST of HG10021120 vs. ExPASy Swiss-Prot
Match: P29448 (Thioredoxin H1 OS=Arabidopsis thaliana OX=3702 GN=TRX1 PE=1 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 6.6e-17
Identity = 51/139 (36.69%), Postives = 73/139 (52.52%), Query Frame = 0


Query: 7   SRQTRVVKIESMESWNFYLTKATHQDSLVVVHFTASWCMPSVAMNPFFEELAFNYPDVLF 66
           S + +V+   ++E+WN  L KA    +LVVV FTASWC P   + PFF +LA   P+VLF
Sbjct: 3   SEEGQVIACHTVETWNEQLQKANESKTLVVVDFTASWCGPCRFIAPFFADLAKKLPNVLF 62

Query: 67  LTVDVDEVKVKLTEFRKRKSDGERMSEEERNLTCLLQEVAAKLEIKAMPTFLVMKNGTQI 126
           L VD DE+K                             VA+   I+AMPTF+ +K G  +
Sbjct: 63  LKVDTDELK----------------------------SVASDWAIQAMPTFMFLKEGKIL 113

Query: 127 DKLVGANPEEMRKRIGAYV 146
           DK+VGA  +E++  I  ++
Sbjct: 123 DKVVGAKKDELQSTIAKHL 113

[Close]

BLAST of HG10021120 vs. ExPASy Swiss-Prot
Match: P85801 (Thioredoxin H-type OS=Populus jackii OX=640484 PE=1 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 3.3e-16
Identity = 45/134 (33.58%), Postives = 73/134 (54.48%), Query Frame = 0


Query: 15  IESMESWNFYLTKATHQDSLVVVHFTASWCMPSVAMNPFFEELAFNYPDVLFLTVDVDEV 74
           I + E W+  L++A+    +V+ +F+A WC P   + P++ EL+ NYP ++FL +DVDE 
Sbjct: 29  ITTKERWDQKLSEASRDGKIVLANFSARWCGPCKQIAPYYIELSENYPSLMFLVIDVDE- 88

Query: 75  KVKLTEFRKRKSDGERMSEEERNLTCLLQEVAAKLEIKAMPTFLVMKNGTQIDKLVGANP 134
                                      L + +A  EIKA PTF  +++G Q+DKLVGAN 
Sbjct: 89  ---------------------------LSDFSASWEIKATPTFFFLRDGQQVDKLVGANK 134

Query: 135 EEMRKRIGAYVEAI 149
            E+ K+I A ++++
Sbjct: 149 PELHKKITAILDSL 134

[Close]

BLAST of HG10021120 vs. ExPASy Swiss-Prot
Match: O64394 (Thioredoxin H-type OS=Triticum aestivum OX=4565 PE=2 SV=3)

HSP 1 Score: 84.3 bits (207), Expect = 1.3e-15
Identity = 46/133 (34.59%), Postives = 66/133 (49.62%), Query Frame = 0


Query: 12  VVKIESMESWNFYLTKATHQDSLVVVHFTASWCMPSVAMNPFFEELAFNYPDVLFLTVDV 71
           V+ + S+E W   + +A     LVV+ FTASWC P   M P F +LA  +P  +FL VDV
Sbjct: 20  VISVHSLEQWTMQIEEANAAKKLVVIDFTASWCGPCRIMAPIFADLAKKFPAAVFLKVDV 79

Query: 72  DEVKVKLTEFRKRKSDGERMSEEERNLTCLLQEVAAKLEIKAMPTFLVMKNGTQIDKLVG 131
           DE+K                             +A +  ++AMPTFL MK G   D++VG
Sbjct: 80  DELK----------------------------PIAEQFSVEAMPTFLFMKEGDVKDRVVG 124

Query: 132 ANPEEMRKRIGAY 145
           A  EE+  ++G +
Sbjct: 140 AIKEELTTKVGLH 124

[Close]

BLAST of HG10021120 vs. ExPASy TrEMBL
Match: A0A5A7UTN6 (Thioredoxin-like protein CXXS1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G006200 PE=4 SV=1)

HSP 1 Score: 209.1 bits (531), Expect = 1.2e-50
Identity = 110/151 (72.85%), Postives = 116/151 (76.82%), Query Frame = 0


Query: 1   MEGQEQSRQTRVVKIESMESWNFYLTKATHQDSLVVVHFTASWCMPSVAMNPFFEELAFN 60
           MEGQ+Q R+TRVVKIESMESWNFYLTKA  QDSL+VVHFTASWCMPSVAMNPFFEELA  
Sbjct: 1   MEGQDQWRRTRVVKIESMESWNFYLTKAIQQDSLIVVHFTASWCMPSVAMNPFFEELALT 60

Query: 61  YPDVLFLTVDVDEVKVKLTEFRKRKSDGERMSEEERNLTCLLQEVAAKLEIKAMPTFLVM 120
           YPDVLFLTVDVDEVK                            EVAAKLEIKAMPTFL+M
Sbjct: 61  YPDVLFLTVDVDEVK----------------------------EVAAKLEIKAMPTFLMM 120

Query: 121 KNGTQIDKLVGANPEEMRKRIGAYVEAIHVA 152
           KNGTQIDKLVGANPEE+RKRIGAY E +HVA
Sbjct: 121 KNGTQIDKLVGANPEEIRKRIGAYTETVHVA 123

[Close]

BLAST of HG10021120 vs. ExPASy TrEMBL
Match: A0A1S3B3B5 (thioredoxin-like protein CXXS1 OS=Cucumis melo OX=3656 GN=LOC103485681 PE=4 SV=1)

HSP 1 Score: 209.1 bits (531), Expect = 1.2e-50
Identity = 110/151 (72.85%), Postives = 116/151 (76.82%), Query Frame = 0


Query: 1   MEGQEQSRQTRVVKIESMESWNFYLTKATHQDSLVVVHFTASWCMPSVAMNPFFEELAFN 60
           MEGQ+Q R+TRVVKIESMESWNFYLTKA  QDSL+VVHFTASWCMPSVAMNPFFEELA  
Sbjct: 1   MEGQDQWRRTRVVKIESMESWNFYLTKAIQQDSLIVVHFTASWCMPSVAMNPFFEELALT 60

Query: 61  YPDVLFLTVDVDEVKVKLTEFRKRKSDGERMSEEERNLTCLLQEVAAKLEIKAMPTFLVM 120
           YPDVLFLTVDVDEVK                            EVAAKLEIKAMPTFL+M
Sbjct: 61  YPDVLFLTVDVDEVK----------------------------EVAAKLEIKAMPTFLMM 120

Query: 121 KNGTQIDKLVGANPEEMRKRIGAYVEAIHVA 152
           KNGTQIDKLVGANPEE+RKRIGAY E +HVA
Sbjct: 121 KNGTQIDKLVGANPEEIRKRIGAYTETVHVA 123

[Close]

BLAST of HG10021120 vs. ExPASy TrEMBL
Match: A0A0A0LUX0 (Thioredoxin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G065970 PE=4 SV=1)

HSP 1 Score: 200.7 bits (509), Expect = 4.4e-48
Identity = 107/151 (70.86%), Postives = 113/151 (74.83%), Query Frame = 0


Query: 1   MEGQEQSRQTRVVKIESMESWNFYLTKATHQDSLVVVHFTASWCMPSVAMNPFFEELAFN 60
           MEGQ+Q ++TRVVKIESMESWNF LTKA  QDSL+VVHFTASWCMPSVAMNPFFEELA  
Sbjct: 1   MEGQDQWQRTRVVKIESMESWNFNLTKAIQQDSLIVVHFTASWCMPSVAMNPFFEELALT 60

Query: 61  YPDVLFLTVDVDEVKVKLTEFRKRKSDGERMSEEERNLTCLLQEVAAKLEIKAMPTFLVM 120
           YPDVLFLTVDVDEVK                            EVAAKLEIKAMPTFLVM
Sbjct: 61  YPDVLFLTVDVDEVK----------------------------EVAAKLEIKAMPTFLVM 120

Query: 121 KNGTQIDKLVGANPEEMRKRIGAYVEAIHVA 152
           KNG  IDKLVGANPEE+RKRIGAY E +HVA
Sbjct: 121 KNGNLIDKLVGANPEEIRKRIGAYTETVHVA 123

[Close]

BLAST of HG10021120 vs. ExPASy TrEMBL
Match: A0A6J1JW03 (thioredoxin-like protein CXXS1 OS=Cucurbita maxima OX=3661 GN=LOC111490202 PE=4 SV=1)

HSP 1 Score: 197.2 bits (500), Expect = 4.9e-47
Identity = 106/151 (70.20%), Postives = 112/151 (74.17%), Query Frame = 0


Query: 1   MEGQEQSRQTRVVKIESMESWNFYLTKATHQDSLVVVHFTASWCMPSVAMNPFFEELAFN 60
           MEGQEQ RQ RVVKIESMESWN ++TKA  QDSL+VVHFTASWCMPSVAMNPFFEELAFN
Sbjct: 1   MEGQEQWRQIRVVKIESMESWNSFVTKAAQQDSLIVVHFTASWCMPSVAMNPFFEELAFN 60

Query: 61  YPDVLFLTVDVDEVKVKLTEFRKRKSDGERMSEEERNLTCLLQEVAAKLEIKAMPTFLVM 120
           YPD LFLTVDVDEVK                            EVAAK+EIKAMPTFL+M
Sbjct: 61  YPDALFLTVDVDEVK----------------------------EVAAKMEIKAMPTFLLM 120

Query: 121 KNGTQIDKLVGANPEEMRKRIGAYVEAIHVA 152
           KNGTQI KLVGANPEE+RK I A VE IHVA
Sbjct: 121 KNGTQIGKLVGANPEEVRKMIDANVETIHVA 123

[Close]

BLAST of HG10021120 vs. ExPASy TrEMBL
Match: A0A6J1GTK2 (thioredoxin-like protein CXXS1 OS=Cucurbita moschata OX=3662 GN=LOC111456843 PE=4 SV=1)

HSP 1 Score: 197.2 bits (500), Expect = 4.9e-47
Identity = 106/151 (70.20%), Postives = 112/151 (74.17%), Query Frame = 0


Query: 1   MEGQEQSRQTRVVKIESMESWNFYLTKATHQDSLVVVHFTASWCMPSVAMNPFFEELAFN 60
           MEGQEQ RQ RVVKIESMESWN ++TKA  QDSL+VVHFTASWCMPSVAMNPFFEELAFN
Sbjct: 1   MEGQEQWRQIRVVKIESMESWNSFVTKAAQQDSLIVVHFTASWCMPSVAMNPFFEELAFN 60

Query: 61  YPDVLFLTVDVDEVKVKLTEFRKRKSDGERMSEEERNLTCLLQEVAAKLEIKAMPTFLVM 120
           YPD LFLTVDVDEVK                            EVAAK+EIKAMPTFL+M
Sbjct: 61  YPDALFLTVDVDEVK----------------------------EVAAKMEIKAMPTFLLM 120

Query: 121 KNGTQIDKLVGANPEEMRKRIGAYVEAIHVA 152
           KNGTQI KLVGANPEE+RK I A VE IHVA
Sbjct: 121 KNGTQIGKLVGANPEEVRKMIDANVETIHVA 123

[Close]

BLAST of HG10021120 vs. TAIR 10
Match: AT1G11530.1 (C-terminal cysteine residue is changed to a serine 1 )

HSP 1 Score: 143.7 bits (361), Expect = 1.2e-34
Identity = 74/144 (51.39%), Postives = 97/144 (67.36%), Query Frame = 0


Query: 11  RVVKIESMESWNFYLTKATHQDSLVVVHFTASWCMPSVAMNPFFEELAFNYPDVLFLTVD 70
           RVVKI+S ESWNFY+++A +Q+  +V HFTA WC+PSV MN FFEELAFNY D LFL VD
Sbjct: 3   RVVKIDSAESWNFYVSQAKNQNCPIVAHFTALWCIPSVFMNSFFEELAFNYKDALFLIVD 62

Query: 71  VDEVKVKLTEFRKRKSDGERMSEEERNLTCLLQEVAAKLEIKAMPTFLVMKNGTQIDKLV 130
           VDEVK                            EVA++LE+KAMPTFL +K+G  +DKLV
Sbjct: 63  VDEVK----------------------------EVASQLEVKAMPTFLFLKDGNAMDKLV 118

Query: 131 GANPEEMRKRIGAYVEA---IHVA 152
           GANP+E++KR+  +V++   +H+A
Sbjct: 123 GANPDEIKKRVDGFVQSSRVVHIA 118

[Close]

BLAST of HG10021120 vs. TAIR 10
Match: AT3G51030.1 (thioredoxin H-type 1 )

HSP 1 Score: 88.6 bits (218), Expect = 4.7e-18
Identity = 51/139 (36.69%), Postives = 73/139 (52.52%), Query Frame = 0


Query: 7   SRQTRVVKIESMESWNFYLTKATHQDSLVVVHFTASWCMPSVAMNPFFEELAFNYPDVLF 66
           S + +V+   ++E+WN  L KA    +LVVV FTASWC P   + PFF +LA   P+VLF
Sbjct: 3   SEEGQVIACHTVETWNEQLQKANESKTLVVVDFTASWCGPCRFIAPFFADLAKKLPNVLF 62

Query: 67  LTVDVDEVKVKLTEFRKRKSDGERMSEEERNLTCLLQEVAAKLEIKAMPTFLVMKNGTQI 126
           L VD DE+K                             VA+   I+AMPTF+ +K G  +
Sbjct: 63  LKVDTDELK----------------------------SVASDWAIQAMPTFMFLKEGKIL 113

Query: 127 DKLVGANPEEMRKRIGAYV 146
           DK+VGA  +E++  I  ++
Sbjct: 123 DKVVGAKKDELQSTIAKHL 113

[Close]

BLAST of HG10021120 vs. TAIR 10
Match: AT3G08710.1 (thioredoxin H-type 9 )

HSP 1 Score: 82.4 bits (202), Expect = 3.4e-16
Identity = 45/134 (33.58%), Postives = 71/134 (52.99%), Query Frame = 0


Query: 15  IESMESWNFYLTKATHQDSLVVVHFTASWCMPSVAMNPFFEELAFNYPDVLFLTVDVDEV 74
           I + ESW+  L +A     +VV +F+A+WC P   + PFF EL+  +  ++FL VDVDE 
Sbjct: 28  ITTKESWDDKLAEADRDGKIVVANFSATWCGPCKIVAPFFIELSEKHSSLMFLLVDVDE- 87

Query: 75  KVKLTEFRKRKSDGERMSEEERNLTCLLQEVAAKLEIKAMPTFLVMKNGTQIDKLVGANP 134
                                      L + ++  +IKA PTF  +KNG QI KLVGAN 
Sbjct: 88  ---------------------------LSDFSSSWDIKATPTFFFLKNGQQIGKLVGANK 133

Query: 135 EEMRKRIGAYVEAI 149
            E++K++ + ++++
Sbjct: 148 PELQKKVTSIIDSV 133

[Close]

BLAST of HG10021120 vs. TAIR 10
Match: AT3G08710.2 (thioredoxin H-type 9 )

HSP 1 Score: 82.4 bits (202), Expect = 3.4e-16
Identity = 45/134 (33.58%), Postives = 71/134 (52.99%), Query Frame = 0


Query: 15  IESMESWNFYLTKATHQDSLVVVHFTASWCMPSVAMNPFFEELAFNYPDVLFLTVDVDEV 74
           I + ESW+  L +A     +VV +F+A+WC P   + PFF EL+  +  ++FL VDVDE 
Sbjct: 28  ITTKESWDDKLAEADRDGKIVVANFSATWCGPCKIVAPFFIELSEKHSSLMFLLVDVDE- 87

Query: 75  KVKLTEFRKRKSDGERMSEEERNLTCLLQEVAAKLEIKAMPTFLVMKNGTQIDKLVGANP 134
                                      L + ++  +IKA PTF  +KNG QI KLVGAN 
Sbjct: 88  ---------------------------LSDFSSSWDIKATPTFFFLKNGQQIGKLVGANK 133

Query: 135 EEMRKRIGAYVEAI 149
            E++K++ + ++++
Sbjct: 148 PELQKKVTSIIDSV 133

[Close]

BLAST of HG10021120 vs. TAIR 10
Match: AT3G56420.1 (Thioredoxin superfamily protein )

HSP 1 Score: 78.2 bits (191), Expect = 6.4e-15
Identity = 44/144 (30.56%), Postives = 75/144 (52.08%), Query Frame = 0


Query: 3   GQEQSR---QTRVVKIESMESWNFYLTKATHQDSLVVVHFTASWCMPSVAMNPFFEELAF 62
           GQ +S+   + +V  +  +E W   +T+A +   ++VV+F+A WC+P   + P F +LA 
Sbjct: 30  GQTRSQHGSKGKVHPVSRIEKWEEKITEANNHGKILVVNFSAPWCVPCKKIEPVFRDLAS 89

Query: 63  NYPDVLFLTVDVDEVKVKLTEFRKRKSDGERMSEEERNLTCLLQEVAAKLEIKAMPTFLV 122
            YP ++F+TVDV+E                            L E + +  ++A PT + 
Sbjct: 90  RYPSMIFVTVDVEE----------------------------LAEFSNEWNVEATPTVVF 145

Query: 123 MKNGTQIDKLVGANPEEMRKRIGA 144
           +K+G Q+DKLVGA   E++K+  A
Sbjct: 150 LKDGRQMDKLVGAETSELQKKTAA 145

The following BLAST results are available for this feature:

BLAST of HG10021120 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038895316.1	4.7e-52	76.97	thioredoxin-like protein CXXS1 [Benincasa hispida]	[more]
XP_008441601.1	2.6e-50	72.85	PREDICTED: thioredoxin-like protein CXXS1 [Cucumis melo] >KAA0056899.1 thioredox...	[more]
XP_004145093.1	9.2e-48	70.86	thioredoxin-like protein CXXS1 [Cucumis sativus] >KGN64577.1 hypothetical protei...	[more]
XP_022954644.1	1.0e-46	70.20	thioredoxin-like protein CXXS1 [Cucurbita moschata] >XP_022994497.1 thioredoxin-...	[more]
XP_023542798.1	6.6e-46	69.54	thioredoxin-like protein CXXS1 isoform X1 [Cucurbita pepo subsp. pepo] >XP_02354...	[more]

BLAST of HG10021120 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LDI5	1.7e-33	51.39	Thioredoxin-like protein CXXS1 OS=Arabidopsis thaliana OX=3702 GN=CXXS1 PE=2 SV=...	[more]
Q0J9V5	5.3e-22	38.82	Thioredoxin-like protein CXXS1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os04g...	[more]
P29448	6.6e-17	36.69	Thioredoxin H1 OS=Arabidopsis thaliana OX=3702 GN=TRX1 PE=1 SV=1	[more]
P85801	3.3e-16	33.58	Thioredoxin H-type OS=Populus jackii OX=640484 PE=1 SV=1	[more]
O64394	1.3e-15	34.59	Thioredoxin H-type OS=Triticum aestivum OX=4565 PE=2 SV=3	[more]

BLAST of HG10021120 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UTN6	1.2e-50	72.85	Thioredoxin-like protein CXXS1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
A0A1S3B3B5	1.2e-50	72.85	thioredoxin-like protein CXXS1 OS=Cucumis melo OX=3656 GN=LOC103485681 PE=4 SV=1	[more]
A0A0A0LUX0	4.4e-48	70.86	Thioredoxin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G065970...	[more]
A0A6J1JW03	4.9e-47	70.20	thioredoxin-like protein CXXS1 OS=Cucurbita maxima OX=3661 GN=LOC111490202 PE=4 ...	[more]
A0A6J1GTK2	4.9e-47	70.20	thioredoxin-like protein CXXS1 OS=Cucurbita moschata OX=3662 GN=LOC111456843 PE=...	[more]

BLAST of HG10021120 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G11530.1	1.2e-34	51.39	C-terminal cysteine residue is changed to a serine 1	[more]
AT3G51030.1	4.7e-18	36.69	thioredoxin H-type 1	[more]
AT3G08710.1	3.4e-16	33.58	thioredoxin H-type 9	[more]
AT3G08710.2	3.4e-16	33.58	thioredoxin H-type 9	[more]
AT3G56420.1	6.4e-15	30.56	Thioredoxin superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013766	Thioredoxin domain	PFAM	PF00085	Thioredoxin	coord: 19..77 e-value: 2.7E-9 score: 36.9 coord: 103..140 e-value: 3.1E-5 score: 23.9
IPR013766	Thioredoxin domain	PROSITE	PS51352	THIOREDOXIN_2	coord: 1..146 score: 9.424223
None	No IPR available	GENE3D	3.40.30.10	Glutaredoxin	coord: 1..149 e-value: 1.2E-31 score: 111.2
None	No IPR available	PANTHER	PTHR10438	THIOREDOXIN	coord: 1..79
None	No IPR available	PANTHER	PTHR10438:SF433	THIOREDOXIN-LIKE PROTEIN CXXS1	coord: 103..149
None	No IPR available	PANTHER	PTHR10438:SF433	THIOREDOXIN-LIKE PROTEIN CXXS1	coord: 1..79
None	No IPR available	PANTHER	PTHR10438	THIOREDOXIN	coord: 103..149
None	No IPR available	CDD	cd02947	TRX_family	coord: 25..136 e-value: 8.25011E-26 score: 91.8508
IPR036249	Thioredoxin-like superfamily	SUPERFAMILY	52833	Thioredoxin-like	coord: 9..145

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10021120.1	HG10021120.1	mRNA