HG10021079 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10021079
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	tobamovirus multiplication protein 1
Location	Chr05: 5148275 .. 5149776 (-)
RNA-Seq Expression	HG10021079
Synteny	HG10021079

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTTTGTGTTGAACTCAACTCAGAGTTAGTAATCTATGGACAGGTTTGCATTTGGATATACATTGGGGTGAATGACAACAGTGTGGTGGAATTCGTTGGAAAAATTTTCATTGCAGGTTAGTATTTGTATCCAGTGAATCATTTCCTGTGTACAAGAGGTCAAGTTTTGTAGTTTGGATCTAGGAGATAATCTTATCATTTTTTCCCTTTCTAACCACTTCTTCCGTTGTTCATTTTATCAGTGGTGTCTTTCATAGCTGCAGTAGGCTTCTTGATATATGGTGGAAGGTGAGTATCTACTTCATGTCTGTTGGATTTATTATTCAATGCATCTAGATTTTGTATTATCTTTGATTACCTTTTTTTGACTACTACTGTTGTATGAAAATCTTTAGATTATTTTTCATGCTTAGACGTTTTCCAATTGAATCTAAAGGGAGAAGGAAGAAACTTCATGAGGTATGTGTCCGTTATTTATTAGTCCTCTATCATGATGTAACCACAAGTGCCCTTTTCTTCCTATTGTATGGACAAAGTTGAGTCATTTGTGAAGTTTTCTATCTTCCATATCTGCATGTAATATTCTGGCAACGGGAAATGAAAATTTCATAATTTATACAGACATTATCTGGTCAAAGTCTATTTACTTTTCTGTGGAAATTGTCAGCTGAGATACCATGATTAAACTTAAGCTGATTGTTTGGAAAATGTGATATAATTAAGCTTCAGATATATCATATATGTTTATATATATATATATATGATCTCCACATCCGAACCCGTTCCCCAGGCTGTGGTATTTGTAGCTACATTAAAATTTGACCTAAATGAAGATAATAGAAAAAGATTACAAGGTAAGCTCCATCAATTGTTTGAAGTAGGATCAATGTTGTTATTTGTAGGCTTGTTAGCCGTTACTTGTAGGTTTTCATGTTTATTGTGGATCTGCCTAATCACGCTTAGGTGCTTTTTAATACTTTTTTTTTTTAAAAAAAATGATTGCAGGTTGGATCTGTAACTGCCATATGCTTTACCTGCTTCCTCATTCGATGCTTTGTGGTATAGTTCAAGCTCCTCCTTTTGTTAGTAATGGAAAAACCTTCTCTAGGGAATGCTAATTTTAAGCATAGGGTGGCAAACTTTATAAATGGACTGAATCTGTGGTTGAAGAAACAAAACTTTTCCGACATTGCATGAGATTCACAAGATTTTTTTAAACTGTTGAATGCAGGTTGCTTTATCTGCTTTTGACGCAGATGCATCACTTGATGTTTTAGATCACCCCCTTCTGAATTTCATCTACTACTTGGTACTTTGCGTTACTAAGCTAGTTCGTGTTTCGTATTTCTGATTTCGATATATTCTGTGTCCTCTGGGCTGATGTTAACCATTTTCTTGAACTTACAGTTGGTCGAAATTCTGCCTTCAGCATTAGTTCTTTACATATTACGCAAATTGCCTCCTAAGAGAATATCAGCTCAATACCACCCCATTCGCTAG

mRNA sequence

ATGTTTTGTGTTGAACTCAACTCAGAGTTAGTAATCTATGGACAGGTTTGCATTTGGATATACATTGGGGTGAATGACAACAGTGTGGTGGAATTCGTTGGAAAAATTTTCATTGCAGTGGTGTCTTTCATAGCTGCAGTAGGCTTCTTGATATATGGTGGAAGATTATTTTTCATGCTTAGACGTTTTCCAATTGAATCTAAAGGGAGAAGGAAGAAACTTCATGAGGTTGCTTTATCTGCTTTTGACGCAGATGCATCACTTGATGTTTTAGATCACCCCCTTCTGAATTTCATCTACTACTTGTTGGTCGAAATTCTGCCTTCAGCATTAGTTCTTTACATATTACGCAAATTGCCTCCTAAGAGAATATCAGCTCAATACCACCCCATTCGCTAG

Coding sequence (CDS)

ATGTTTTGTGTTGAACTCAACTCAGAGTTAGTAATCTATGGACAGGTTTGCATTTGGATATACATTGGGGTGAATGACAACAGTGTGGTGGAATTCGTTGGAAAAATTTTCATTGCAGTGGTGTCTTTCATAGCTGCAGTAGGCTTCTTGATATATGGTGGAAGATTATTTTTCATGCTTAGACGTTTTCCAATTGAATCTAAAGGGAGAAGGAAGAAACTTCATGAGGTTGCTTTATCTGCTTTTGACGCAGATGCATCACTTGATGTTTTAGATCACCCCCTTCTGAATTTCATCTACTACTTGTTGGTCGAAATTCTGCCTTCAGCATTAGTTCTTTACATATTACGCAAATTGCCTCCTAAGAGAATATCAGCTCAATACCACCCCATTCGCTAG

Protein sequence

MFCVELNSELVIYGQVCIWIYIGVNDNSVVEFVGKIFIAVVSFIAAVGFLIYGGRLFFMLRRFPIESKGRRKKLHEVALSAFDADASLDVLDHPLLNFIYYLLVEILPSALVLYILRKLPPKRISAQYHPIR

Homology

[Close]

BLAST of HG10021079 vs. NCBI nr
Match: XP_004145105.1 (tobamovirus multiplication protein 1 [Cucumis sativus] >KGN64534.1 hypothetical protein Csa_013301 [Cucumis sativus])

HSP 1 Score: 215.3 bits (547), Expect = 3.1e-52
Identity = 118/147 (80.27%), Postives = 124/147 (84.35%), Query Frame = 0


Query: 4   VELNSELVIYGQVCIWIYIGVNDNSVVEFVGKIFIAVVSFIAAVGFLIYGGRLFFMLRRF 63
           + +NS + +  QVCIWIYIGVNDNSVVEF+GKIFIAVVSFIAA+GFLIYGGRLFFMLRRF
Sbjct: 144 ISINSVIYLI-QVCIWIYIGVNDNSVVEFIGKIFIAVVSFIAALGFLIYGGRLFFMLRRF 203

Query: 64  PIESKGRRKKLHE------------------VALSAFDADASLDVLDHPLLNFIYYLLVE 123
           PIESKGRRKKLHE                  VALSAFDADASLDVLDHPLLNFIYYLLVE
Sbjct: 204 PIESKGRRKKLHEVGSVTAICFTCFLIRCFVVALSAFDADASLDVLDHPLLNFIYYLLVE 263

Query: 124 ILPSALVLYILRKLPPKRISAQYHPIR 133
           ILPSALVLYILRKLPPKRISAQYHPIR
Sbjct: 264 ILPSALVLYILRKLPPKRISAQYHPIR 289

[Close]

BLAST of HG10021079 vs. NCBI nr
Match: KAA0056867.1 (tobamovirus multiplication protein 1 [Cucumis melo var. makuwa])

HSP 1 Score: 215.3 bits (547), Expect = 3.1e-52
Identity = 118/147 (80.27%), Postives = 124/147 (84.35%), Query Frame = 0


Query: 4   VELNSELVIYGQVCIWIYIGVNDNSVVEFVGKIFIAVVSFIAAVGFLIYGGRLFFMLRRF 63
           + +NS + +  QVCIWIYIGVNDNSVVEF+GKIFIAVVSFIAA+GFLIYGGRLFFMLRRF
Sbjct: 147 ISINSVIYLI-QVCIWIYIGVNDNSVVEFIGKIFIAVVSFIAALGFLIYGGRLFFMLRRF 206

Query: 64  PIESKGRRKKLHE------------------VALSAFDADASLDVLDHPLLNFIYYLLVE 123
           PIESKGRRKKLHE                  VALSAFDADASLDVLDHPLLNFIYYLLVE
Sbjct: 207 PIESKGRRKKLHEVGSVTAICFTCFLIRCFVVALSAFDADASLDVLDHPLLNFIYYLLVE 266

Query: 124 ILPSALVLYILRKLPPKRISAQYHPIR 133
           ILPSALVLYILRKLPPKRISAQYHPIR
Sbjct: 267 ILPSALVLYILRKLPPKRISAQYHPIR 292

[Close]

BLAST of HG10021079 vs. NCBI nr
Match: XP_008441185.1 (PREDICTED: tobamovirus multiplication protein 1 [Cucumis melo] >TYJ99370.1 tobamovirus multiplication protein 1 [Cucumis melo var. makuwa])

HSP 1 Score: 215.3 bits (547), Expect = 3.1e-52
Identity = 118/147 (80.27%), Postives = 124/147 (84.35%), Query Frame = 0


Query: 4   VELNSELVIYGQVCIWIYIGVNDNSVVEFVGKIFIAVVSFIAAVGFLIYGGRLFFMLRRF 63
           + +NS + +  QVCIWIYIGVNDNSVVEF+GKIFIAVVSFIAA+GFLIYGGRLFFMLRRF
Sbjct: 144 ISINSVIYLI-QVCIWIYIGVNDNSVVEFIGKIFIAVVSFIAALGFLIYGGRLFFMLRRF 203

Query: 64  PIESKGRRKKLHE------------------VALSAFDADASLDVLDHPLLNFIYYLLVE 123
           PIESKGRRKKLHE                  VALSAFDADASLDVLDHPLLNFIYYLLVE
Sbjct: 204 PIESKGRRKKLHEVGSVTAICFTCFLIRCFVVALSAFDADASLDVLDHPLLNFIYYLLVE 263

Query: 124 ILPSALVLYILRKLPPKRISAQYHPIR 133
           ILPSALVLYILRKLPPKRISAQYHPIR
Sbjct: 264 ILPSALVLYILRKLPPKRISAQYHPIR 289

[Close]

BLAST of HG10021079 vs. NCBI nr
Match: XP_038895150.1 (tobamovirus multiplication protein 1 [Benincasa hispida])

HSP 1 Score: 214.9 bits (546), Expect = 4.1e-52
Identity = 121/148 (81.76%), Postives = 124/148 (83.78%), Query Frame = 0


Query: 4   VELNSELVIY-GQVCIWIYIGVNDNSVVEFVGKIFIAVVSFIAAVGFLIYGGRLFFMLRR 63
           V ++   VIY  QVCIWIYIGVNDNSVVEFVGKIFIAVVSFIAAVGFLIYGGRLFFMLRR
Sbjct: 142 VYISINCVIYLIQVCIWIYIGVNDNSVVEFVGKIFIAVVSFIAAVGFLIYGGRLFFMLRR 201

Query: 64  FPIESKGRRKKLHE------------------VALSAFDADASLDVLDHPLLNFIYYLLV 123
           FPIESKGRRKKLHE                  V+LSAFDADASLDVLDHPLLNFIYYLLV
Sbjct: 202 FPIESKGRRKKLHEVGSVTAICFTCFLIRCFVVSLSAFDADASLDVLDHPLLNFIYYLLV 261

Query: 124 EILPSALVLYILRKLPPKRISAQYHPIR 133
           EILPSALVLYILRKLPPKRISAQYHPIR
Sbjct: 262 EILPSALVLYILRKLPPKRISAQYHPIR 289

[Close]

BLAST of HG10021079 vs. NCBI nr
Match: GFP79065.1 (tobamovirus multiplication protein 1 [Phtheirospermum japonicum])

HSP 1 Score: 211.1 bits (536), Expect = 5.9e-51
Identity = 104/123 (84.55%), Postives = 115/123 (93.50%), Query Frame = 0


Query: 10  LVIYGQVCIWIYIGVNDNSVVEFVGKIFIAVVSFIAAVGFLIYGGRLFFMLRRFPIESKG 69
           ++ + QVCIW+Y+G+NDNS  EF+GKIFIAVVSFIAA+GFL+YGGRLFFMLRRFPIESKG
Sbjct: 145 VIYFIQVCIWVYLGINDNSAAEFIGKIFIAVVSFIAALGFLLYGGRLFFMLRRFPIESKG 204

Query: 70  RRKKLHEVALSAFDADASLDVLDHPLLNFIYYLLVEILPSALVLYILRKLPPKRISAQYH 129
           RRKKLHEV LSAFD DASLDVLDHP+LN IYY LVEILPSALVLYILRKLPPKR+SAQYH
Sbjct: 205 RRKKLHEVVLSAFDLDASLDVLDHPVLNLIYYTLVEILPSALVLYILRKLPPKRVSAQYH 264

Query: 130 PIR 133
           PIR
Sbjct: 265 PIR 267

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BLAST of HG10021079 vs. ExPASy Swiss-Prot
Match: Q402F4 (Tobamovirus multiplication protein 1 OS=Nicotiana tabacum OX=4097 GN=TOM1 PE=1 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 3.7e-48
Identity = 102/139 (73.38%), Postives = 111/139 (79.86%), Query Frame = 0


Query: 11  VIYGQVCIWIYIGVNDNSVVEFVGKIFIAVVSFIAAVGFLIYGGRLFFMLRRFPIESKGR 70
           + + Q CIW+Y+  NDNS VEF+GKIFIAVVSFIAA+GFL+YGGRLF MLRRFPIESKGR
Sbjct: 149 IYFIQACIWVYLWSNDNSTVEFIGKIFIAVVSFIAALGFLLYGGRLFLMLRRFPIESKGR 208

Query: 71  RKKLHE------------------VALSAFDADASLDVLDHPLLNFIYYLLVEILPSALV 130
           RKKLHE                  V LSAFD DASLDVLDHP+LN IYYLLVEILPSALV
Sbjct: 209 RKKLHEVGSVTAICFTCFLISCFVVVLSAFDPDASLDVLDHPVLNLIYYLLVEILPSALV 268

Query: 131 LYILRKLPPKRISAQYHPI 132
           LYILRKLPPKR+SAQYHPI
Sbjct: 269 LYILRKLPPKRVSAQYHPI 287

[Close]

BLAST of HG10021079 vs. ExPASy Swiss-Prot
Match: Q9FEG2 (Tobamovirus multiplication protein 1 OS=Arabidopsis thaliana OX=3702 GN=TOM1 PE=1 SV=1)

HSP 1 Score: 183.0 bits (463), Expect = 2.3e-45
Identity = 98/140 (70.00%), Postives = 111/140 (79.29%), Query Frame = 0


Query: 11  VIYGQVCIWIYIGVNDNSVVEFVGKIFIAVVSFIAAVGFLIYGGRLFFMLRRFPIESKGR 70
           V   Q+ IW YI V+DNS VE VGKIFIAVVSFIAA+GFL+YGGRLFFMLRRFPIESKGR
Sbjct: 152 VYLAQIGIWAYIWVHDNSTVELVGKIFIAVVSFIAALGFLLYGGRLFFMLRRFPIESKGR 211

Query: 71  RKKLHE------------------VALSAFDADASLDVLDHPLLNFIYYLLVEILPSALV 130
           RKKLHE                  VA+SAFD D +LDVLDHP+LN IYY++VE+LPSALV
Sbjct: 212 RKKLHEVGSVTAICFTCFLIRCVVVAVSAFDKDLTLDVLDHPVLNLIYYMVVEVLPSALV 271

Query: 131 LYILRKLPPKRISAQYHPIR 133
           L+ILRKLPPKR+SAQYHPI+
Sbjct: 272 LFILRKLPPKRVSAQYHPIQ 291

[Close]

BLAST of HG10021079 vs. ExPASy Swiss-Prot
Match: Q9ZUM2 (Tobamovirus multiplication protein 3 OS=Arabidopsis thaliana OX=3702 GN=TOM3 PE=1 SV=2)

HSP 1 Score: 139.0 bits (349), Expect = 3.7e-32
Identity = 77/136 (56.62%), Postives = 93/136 (68.38%), Query Frame = 0


Query: 15  QVCIWIYIGVNDNSVVEFVGKIFIAVVSFIAAVGFLIYGGRLFFMLRRFPIESKGRRKKL 74
           Q+ +W+ +      V+  + K+F A VS  AA+GFL+YGGRLF ML+RFP+ESKGRRKKL
Sbjct: 168 QIALWLVLWWKPVRVMVILSKMFFAGVSLFAALGFLLYGGRLFLMLQRFPVESKGRRKKL 227

Query: 75  HEV------------------ALSAFDADASLDVLDHPLLNFIYYLLVEILPSALVLYIL 133
            EV                    +AFD  A+LDVLDHP+LNFIYYLLVEILPS+LVL+IL
Sbjct: 228 QEVGYVTTICFTCFLIRCIMMCFAAFDEGANLDVLDHPILNFIYYLLVEILPSSLVLFIL 287

[Close]

BLAST of HG10021079 vs. ExPASy Swiss-Prot
Match: Q402F3 (Tobamovirus multiplication protein 3 OS=Nicotiana tabacum OX=4097 GN=TOM3 PE=1 SV=1)

HSP 1 Score: 137.5 bits (345), Expect = 1.1e-31
Identity = 77/136 (56.62%), Postives = 92/136 (67.65%), Query Frame = 0


Query: 15  QVCIWIYIGVNDNSVVEFVGKIFIAVVSFIAAVGFLIYGGRLFFMLRRFPIESKGRRKKL 74
           Q+ +W+ I      V+  + K+F A VS  AA+GFL+YGGRLF ML+RFP+ESKGRRKKL
Sbjct: 159 QIILWLIIWWKPVRVLVILSKMFFAGVSLFAALGFLLYGGRLFLMLQRFPVESKGRRKKL 218

Query: 75  HEV------------------ALSAFDADASLDVLDHPLLNFIYYLLVEILPSALVLYIL 133
            EV                    +AF+  A LDVLDHP+LN IYYLLVEILPS+LVL+IL
Sbjct: 219 QEVGYVTTICFSCFLIRCVMMCFNAFNKAADLDVLDHPILNLIYYLLVEILPSSLVLFIL 278

[Close]

BLAST of HG10021079 vs. ExPASy Swiss-Prot
Match: Q948R8 (Protein TOM THREE HOMOLOG 1 OS=Arabidopsis thaliana OX=3702 GN=THH1 PE=2 SV=1)

HSP 1 Score: 135.6 bits (340), Expect = 4.1e-31
Identity = 75/136 (55.15%), Postives = 91/136 (66.91%), Query Frame = 0


Query: 15  QVCIWIYIGVNDNSVVEFVGKIFIAVVSFIAAVGFLIYGGRLFFMLRRFPIESKGRRKKL 74
           Q+ +W+ +      ++  + K+F A VS  AA+GFL+YGGRLF ML+RFP+ESKGRRKKL
Sbjct: 158 QIALWLVLWWKPVHLMVIISKMFFAGVSLFAALGFLLYGGRLFLMLQRFPVESKGRRKKL 217

Query: 75  HEV------------------ALSAFDADASLDVLDHPLLNFIYYLLVEILPSALVLYIL 133
            EV                     AFD  A LDVLDHP+LNFIYYLLVEILPS+LVL+IL
Sbjct: 218 QEVGYVTTICFTCFLIRCIMMCFDAFDDAADLDVLDHPILNFIYYLLVEILPSSLVLFIL 277

[Close]

BLAST of HG10021079 vs. ExPASy TrEMBL
Match: A0A5A7UQF6 (Tobamovirus multiplication protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold96G00360 PE=3 SV=1)

HSP 1 Score: 215.3 bits (547), Expect = 1.5e-52
Identity = 118/147 (80.27%), Postives = 124/147 (84.35%), Query Frame = 0


Query: 4   VELNSELVIYGQVCIWIYIGVNDNSVVEFVGKIFIAVVSFIAAVGFLIYGGRLFFMLRRF 63
           + +NS + +  QVCIWIYIGVNDNSVVEF+GKIFIAVVSFIAA+GFLIYGGRLFFMLRRF
Sbjct: 147 ISINSVIYLI-QVCIWIYIGVNDNSVVEFIGKIFIAVVSFIAALGFLIYGGRLFFMLRRF 206

Query: 64  PIESKGRRKKLHE------------------VALSAFDADASLDVLDHPLLNFIYYLLVE 123
           PIESKGRRKKLHE                  VALSAFDADASLDVLDHPLLNFIYYLLVE
Sbjct: 207 PIESKGRRKKLHEVGSVTAICFTCFLIRCFVVALSAFDADASLDVLDHPLLNFIYYLLVE 266

Query: 124 ILPSALVLYILRKLPPKRISAQYHPIR 133
           ILPSALVLYILRKLPPKRISAQYHPIR
Sbjct: 267 ILPSALVLYILRKLPPKRISAQYHPIR 292

[Close]

BLAST of HG10021079 vs. ExPASy TrEMBL
Match: A0A5D3BHU2 (Tobamovirus multiplication protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G005880 PE=3 SV=1)

HSP 1 Score: 215.3 bits (547), Expect = 1.5e-52
Identity = 118/147 (80.27%), Postives = 124/147 (84.35%), Query Frame = 0


Query: 4   VELNSELVIYGQVCIWIYIGVNDNSVVEFVGKIFIAVVSFIAAVGFLIYGGRLFFMLRRF 63
           + +NS + +  QVCIWIYIGVNDNSVVEF+GKIFIAVVSFIAA+GFLIYGGRLFFMLRRF
Sbjct: 144 ISINSVIYLI-QVCIWIYIGVNDNSVVEFIGKIFIAVVSFIAALGFLIYGGRLFFMLRRF 203

Query: 64  PIESKGRRKKLHE------------------VALSAFDADASLDVLDHPLLNFIYYLLVE 123
           PIESKGRRKKLHE                  VALSAFDADASLDVLDHPLLNFIYYLLVE
Sbjct: 204 PIESKGRRKKLHEVGSVTAICFTCFLIRCFVVALSAFDADASLDVLDHPLLNFIYYLLVE 263

Query: 124 ILPSALVLYILRKLPPKRISAQYHPIR 133
           ILPSALVLYILRKLPPKRISAQYHPIR
Sbjct: 264 ILPSALVLYILRKLPPKRISAQYHPIR 289

[Close]

BLAST of HG10021079 vs. ExPASy TrEMBL
Match: A0A0A0LU94 (DUF1084 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G063580 PE=3 SV=1)

HSP 1 Score: 215.3 bits (547), Expect = 1.5e-52
Identity = 118/147 (80.27%), Postives = 124/147 (84.35%), Query Frame = 0


Query: 4   VELNSELVIYGQVCIWIYIGVNDNSVVEFVGKIFIAVVSFIAAVGFLIYGGRLFFMLRRF 63
           + +NS + +  QVCIWIYIGVNDNSVVEF+GKIFIAVVSFIAA+GFLIYGGRLFFMLRRF
Sbjct: 144 ISINSVIYLI-QVCIWIYIGVNDNSVVEFIGKIFIAVVSFIAALGFLIYGGRLFFMLRRF 203

Query: 64  PIESKGRRKKLHE------------------VALSAFDADASLDVLDHPLLNFIYYLLVE 123
           PIESKGRRKKLHE                  VALSAFDADASLDVLDHPLLNFIYYLLVE
Sbjct: 204 PIESKGRRKKLHEVGSVTAICFTCFLIRCFVVALSAFDADASLDVLDHPLLNFIYYLLVE 263

Query: 124 ILPSALVLYILRKLPPKRISAQYHPIR 133
           ILPSALVLYILRKLPPKRISAQYHPIR
Sbjct: 264 ILPSALVLYILRKLPPKRISAQYHPIR 289

[Close]

BLAST of HG10021079 vs. ExPASy TrEMBL
Match: A0A1S3B2E1 (tobamovirus multiplication protein 1 OS=Cucumis melo OX=3656 GN=LOC103485394 PE=3 SV=1)

HSP 1 Score: 215.3 bits (547), Expect = 1.5e-52
Identity = 118/147 (80.27%), Postives = 124/147 (84.35%), Query Frame = 0


Query: 4   VELNSELVIYGQVCIWIYIGVNDNSVVEFVGKIFIAVVSFIAAVGFLIYGGRLFFMLRRF 63
           + +NS + +  QVCIWIYIGVNDNSVVEF+GKIFIAVVSFIAA+GFLIYGGRLFFMLRRF
Sbjct: 144 ISINSVIYLI-QVCIWIYIGVNDNSVVEFIGKIFIAVVSFIAALGFLIYGGRLFFMLRRF 203

Query: 64  PIESKGRRKKLHE------------------VALSAFDADASLDVLDHPLLNFIYYLLVE 123
           PIESKGRRKKLHE                  VALSAFDADASLDVLDHPLLNFIYYLLVE
Sbjct: 204 PIESKGRRKKLHEVGSVTAICFTCFLIRCFVVALSAFDADASLDVLDHPLLNFIYYLLVE 263

Query: 124 ILPSALVLYILRKLPPKRISAQYHPIR 133
           ILPSALVLYILRKLPPKRISAQYHPIR
Sbjct: 264 ILPSALVLYILRKLPPKRISAQYHPIR 289

[Close]

BLAST of HG10021079 vs. ExPASy TrEMBL
Match: A0A6J1K0T9 (tobamovirus multiplication protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC111490067 PE=3 SV=1)

HSP 1 Score: 210.3 bits (534), Expect = 4.9e-51
Identity = 117/147 (79.59%), Postives = 123/147 (83.67%), Query Frame = 0


Query: 4   VELNSELVIYGQVCIWIYIGVNDNSVVEFVGKIFIAVVSFIAAVGFLIYGGRLFFMLRRF 63
           + +NS +V   QVCIWIYIGV+DNSVVE VGKI+IAVVSFIAA+GFLIYGGRLFFMLRRF
Sbjct: 144 ISINS-VVYLIQVCIWIYIGVDDNSVVELVGKIYIAVVSFIAAIGFLIYGGRLFFMLRRF 203

Query: 64  PIESKGRRKKLHE------------------VALSAFDADASLDVLDHPLLNFIYYLLVE 123
           PIESKGRRKKLHE                  VALSAFDADASLDVLDHPLLNFIYYLLVE
Sbjct: 204 PIESKGRRKKLHEVGSVTAICFTCFLIRCFVVALSAFDADASLDVLDHPLLNFIYYLLVE 263

Query: 124 ILPSALVLYILRKLPPKRISAQYHPIR 133
           ILPSALVLYILRKLPPKRISAQYHPIR
Sbjct: 264 ILPSALVLYILRKLPPKRISAQYHPIR 289

[Close]

BLAST of HG10021079 vs. TAIR 10
Match: AT4G21790.1 (tobamovirus multiplication 1 )

HSP 1 Score: 183.0 bits (463), Expect = 1.6e-46
Identity = 98/140 (70.00%), Postives = 111/140 (79.29%), Query Frame = 0


Query: 11  VIYGQVCIWIYIGVNDNSVVEFVGKIFIAVVSFIAAVGFLIYGGRLFFMLRRFPIESKGR 70
           V   Q+ IW YI V+DNS VE VGKIFIAVVSFIAA+GFL+YGGRLFFMLRRFPIESKGR
Sbjct: 152 VYLAQIGIWAYIWVHDNSTVELVGKIFIAVVSFIAALGFLLYGGRLFFMLRRFPIESKGR 211

Query: 71  RKKLHE------------------VALSAFDADASLDVLDHPLLNFIYYLLVEILPSALV 130
           RKKLHE                  VA+SAFD D +LDVLDHP+LN IYY++VE+LPSALV
Sbjct: 212 RKKLHEVGSVTAICFTCFLIRCVVVAVSAFDKDLTLDVLDHPVLNLIYYMVVEVLPSALV 271

Query: 131 LYILRKLPPKRISAQYHPIR 133
           L+ILRKLPPKR+SAQYHPI+
Sbjct: 272 LFILRKLPPKRVSAQYHPIQ 291

[Close]

BLAST of HG10021079 vs. TAIR 10
Match: AT2G02180.1 (tobamovirus multiplication protein 3 )

HSP 1 Score: 139.0 bits (349), Expect = 2.7e-33
Identity = 77/136 (56.62%), Postives = 93/136 (68.38%), Query Frame = 0


Query: 15  QVCIWIYIGVNDNSVVEFVGKIFIAVVSFIAAVGFLIYGGRLFFMLRRFPIESKGRRKKL 74
           Q+ +W+ +      V+  + K+F A VS  AA+GFL+YGGRLF ML+RFP+ESKGRRKKL
Sbjct: 168 QIALWLVLWWKPVRVMVILSKMFFAGVSLFAALGFLLYGGRLFLMLQRFPVESKGRRKKL 227

Query: 75  HEV------------------ALSAFDADASLDVLDHPLLNFIYYLLVEILPSALVLYIL 133
            EV                    +AFD  A+LDVLDHP+LNFIYYLLVEILPS+LVL+IL
Sbjct: 228 QEVGYVTTICFTCFLIRCIMMCFAAFDEGANLDVLDHPILNFIYYLLVEILPSSLVLFIL 287

[Close]

BLAST of HG10021079 vs. TAIR 10
Match: AT1G14530.1 (Protein of unknown function (DUF1084) )

HSP 1 Score: 135.6 bits (340), Expect = 2.9e-32
Identity = 75/136 (55.15%), Postives = 91/136 (66.91%), Query Frame = 0


Query: 15  QVCIWIYIGVNDNSVVEFVGKIFIAVVSFIAAVGFLIYGGRLFFMLRRFPIESKGRRKKL 74
           Q+ +W+ +      ++  + K+F A VS  AA+GFL+YGGRLF ML+RFP+ESKGRRKKL
Sbjct: 158 QIALWLVLWWKPVHLMVIISKMFFAGVSLFAALGFLLYGGRLFLMLQRFPVESKGRRKKL 217

Query: 75  HEV------------------ALSAFDADASLDVLDHPLLNFIYYLLVEILPSALVLYIL 133
            EV                     AFD  A LDVLDHP+LNFIYYLLVEILPS+LVL+IL
Sbjct: 218 QEVGYVTTICFTCFLIRCIMMCFDAFDDAADLDVLDHPILNFIYYLLVEILPSSLVLFIL 277

[Close]

BLAST of HG10021079 vs. TAIR 10
Match: AT1G14530.2 (Protein of unknown function (DUF1084) )

HSP 1 Score: 135.6 bits (340), Expect = 2.9e-32
Identity = 75/136 (55.15%), Postives = 91/136 (66.91%), Query Frame = 0


Query: 15  QVCIWIYIGVNDNSVVEFVGKIFIAVVSFIAAVGFLIYGGRLFFMLRRFPIESKGRRKKL 74
           Q+ +W+ +      ++  + K+F A VS  AA+GFL+YGGRLF ML+RFP+ESKGRRKKL
Sbjct: 158 QIALWLVLWWKPVHLMVIISKMFFAGVSLFAALGFLLYGGRLFLMLQRFPVESKGRRKKL 217

Query: 75  HEV------------------ALSAFDADASLDVLDHPLLNFIYYLLVEILPSALVLYIL 133
            EV                     AFD  A LDVLDHP+LNFIYYLLVEILPS+LVL+IL
Sbjct: 218 QEVGYVTTICFTCFLIRCIMMCFDAFDDAADLDVLDHPILNFIYYLLVEILPSSLVLFIL 277

The following BLAST results are available for this feature:

BLAST of HG10021079 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004145105.1	3.1e-52	80.27	tobamovirus multiplication protein 1 [Cucumis sativus] >KGN64534.1 hypothetical ...	[more]
KAA0056867.1	3.1e-52	80.27	tobamovirus multiplication protein 1 [Cucumis melo var. makuwa]	[more]
XP_008441185.1	3.1e-52	80.27	PREDICTED: tobamovirus multiplication protein 1 [Cucumis melo] >TYJ99370.1 tobam...	[more]
XP_038895150.1	4.1e-52	81.76	tobamovirus multiplication protein 1 [Benincasa hispida]	[more]
GFP79065.1	5.9e-51	84.55	tobamovirus multiplication protein 1 [Phtheirospermum japonicum]	[more]

BLAST of HG10021079 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q402F4	3.7e-48	73.38	Tobamovirus multiplication protein 1 OS=Nicotiana tabacum OX=4097 GN=TOM1 PE=1 S...	[more]
Q9FEG2	2.3e-45	70.00	Tobamovirus multiplication protein 1 OS=Arabidopsis thaliana OX=3702 GN=TOM1 PE=...	[more]
Q9ZUM2	3.7e-32	56.62	Tobamovirus multiplication protein 3 OS=Arabidopsis thaliana OX=3702 GN=TOM3 PE=...	[more]
Q402F3	1.1e-31	56.62	Tobamovirus multiplication protein 3 OS=Nicotiana tabacum OX=4097 GN=TOM3 PE=1 S...	[more]
Q948R8	4.1e-31	55.15	Protein TOM THREE HOMOLOG 1 OS=Arabidopsis thaliana OX=3702 GN=THH1 PE=2 SV=1	[more]

BLAST of HG10021079 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UQF6	1.5e-52	80.27	Tobamovirus multiplication protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]
A0A5D3BHU2	1.5e-52	80.27	Tobamovirus multiplication protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]
A0A0A0LU94	1.5e-52	80.27	DUF1084 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G063580 PE=...	[more]
A0A1S3B2E1	1.5e-52	80.27	tobamovirus multiplication protein 1 OS=Cucumis melo OX=3656 GN=LOC103485394 PE=...	[more]
A0A6J1K0T9	4.9e-51	79.59	tobamovirus multiplication protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC1114...	[more]

BLAST of HG10021079 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G21790.1	1.6e-46	70.00	tobamovirus multiplication 1	[more]
AT2G02180.1	2.7e-33	56.62	tobamovirus multiplication protein 3	[more]
AT1G14530.1	2.9e-32	55.15	Protein of unknown function (DUF1084)	[more]
AT1G14530.2	2.9e-32	55.15	Protein of unknown function (DUF1084)	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR009457	THH1/TOM1/TOM3 domain	PFAM	PF06454	DUF1084	coord: 11..78 e-value: 3.0E-28 score: 98.9 coord: 77..132 e-value: 6.1E-24 score: 84.8
IPR040226	THH1/TOM1/TOM3	PANTHER	PTHR31142	TOBAMOVIRUS MULTIPLICATION PROTEIN 1-LIKE ISOFORM X1	coord: 77..132
IPR040226	THH1/TOM1/TOM3	PANTHER	PTHR31142	TOBAMOVIRUS MULTIPLICATION PROTEIN 1-LIKE ISOFORM X1	coord: 11..77
None	No IPR available	PANTHER	PTHR31142:SF1	TOBAMOVIRUS MULTIPLICATION PROTEIN 1	coord: 77..132
None	No IPR available	PANTHER	PTHR31142:SF1	TOBAMOVIRUS MULTIPLICATION PROTEIN 1	coord: 11..77

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10021079.1	HG10021079.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0009705	plant-type vacuole membrane