Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACGGCAATAAGAGGGCTTATGAGTCCCCGAAGATCCTCACGGTCACGCGCAGGGGGAAAGAAGAAGACAGCGCCGCCCAATCCGGAGGAGCAACAAAGTTGGAGAAGGACAGACACCCAAATAGCCACCAACTCAAAACGAAGAAACAACCTCGGACCTCCAAATTCTTCAGGTATCCACTTACCAAAATCCACTTTAAAGATCGCCTCCTCACGCCGACGAACAGAACAACCCCCAAATCCCAACACTAAAATCGCCACAAAAAATTCATTTGGGCGTTCAAACAGCAATTTAAAAGGTGGGTTTGGCTTTAGTTCGTCAAGATCCCTTGGTGGGAGTCGTAAATATTTTGATTCTCCAAATGCTTCTCCCAAGCCATACCGGAGCTTAGGTACAAAAGAAGAATTATTTGGTTCTGAAAGCAAGGCTCAAAGAATATTATTTAAAATTTACATGGAAATTGCATCTCATCGTCAAGGAAACTCATCTATTACATCTTACTTCACAAAGCTCAAGGTATTATGGGATCAACTTGCAAAAACCTATACTGACAATTTGCCTCAATATTCATCAGATGCAATTGAGATGCTGAGTGAACATATGGAAAGAGAAAAGGTAATACAATTTCTTGTTGGACTAAATGATTCTTATTCCTCCATTTGTTCTAAAATACTTCTTAGGAGGCCATTTCCATCGGTGGACATAGCTTTTTCTGTAATCATTCGAAAAGAAAACCGTAGGAAATTGGTAATTTCGTCAGAAGAAGTTGTTGAGAAAAAAATAAGTGTGCAAAACGATTAG
mRNA sequence
ATGACGGCAATAAGAGGGCTTATGAGTCCCCGAAGATCCTCACGGTCACGCGCAGGGGGAAAGAAGAAGACAGCGCCGCCCAATCCGGAGGAGCAACAAAGTTGGAGAAGGACAGACACCCAAATAGCCACCAACTCAAAACGAAGAAACAACCTCGGACCTCCAAATTCTTCAGGTATCCACTTACCAAAATCCACTTTAAAGATCGCCTCCTCACGCCGACGAACAGAACAACCCCCAAATCCCAACACTAAAATCGCCACAAAAAATTCATTTGGGCGTTCAAACAGCAATTTAAAAGGTGGGTTTGGCTTTAGTTCGTCAAGATCCCTTGGTGGGAGTCGTAAATATTTTGATTCTCCAAATGCTTCTCCCAAGCCATACCGGAGCTTAGGTACAAAAGAAGAATTATTTGGTTCTGAAAGCAAGGCTCAAAGAATATTATTTAAAATTTACATGGAAATTGCATCTCATCGTCAAGGAAACTCATCTATTACATCTTACTTCACAAAGCTCAAGGTATTATGGGATCAACTTGCAAAAACCTATACTGACAATTTGCCTCAATATTCATCAGATGCAATTGAGATGCTGAGTGAACATATGGAAAGAGAAAAGGTAATACAATTTCTTGTTGGACTAAATGATTCTTATTCCTCCATTTGTTCTAAAATACTTCTTAGGAGGCCATTTCCATCGGTGGACATAGCTTTTTCTGTAATCATTCGAAAAGAAAACCGTAGGAAATTGGTAATTTCGTCAGAAGAAGTTGTTGAGAAAAAAATAAGTGTGCAAAACGATTAG
Coding sequence (CDS)
ATGACGGCAATAAGAGGGCTTATGAGTCCCCGAAGATCCTCACGGTCACGCGCAGGGGGAAAGAAGAAGACAGCGCCGCCCAATCCGGAGGAGCAACAAAGTTGGAGAAGGACAGACACCCAAATAGCCACCAACTCAAAACGAAGAAACAACCTCGGACCTCCAAATTCTTCAGGTATCCACTTACCAAAATCCACTTTAAAGATCGCCTCCTCACGCCGACGAACAGAACAACCCCCAAATCCCAACACTAAAATCGCCACAAAAAATTCATTTGGGCGTTCAAACAGCAATTTAAAAGGTGGGTTTGGCTTTAGTTCGTCAAGATCCCTTGGTGGGAGTCGTAAATATTTTGATTCTCCAAATGCTTCTCCCAAGCCATACCGGAGCTTAGGTACAAAAGAAGAATTATTTGGTTCTGAAAGCAAGGCTCAAAGAATATTATTTAAAATTTACATGGAAATTGCATCTCATCGTCAAGGAAACTCATCTATTACATCTTACTTCACAAAGCTCAAGGTATTATGGGATCAACTTGCAAAAACCTATACTGACAATTTGCCTCAATATTCATCAGATGCAATTGAGATGCTGAGTGAACATATGGAAAGAGAAAAGGTAATACAATTTCTTGTTGGACTAAATGATTCTTATTCCTCCATTTGTTCTAAAATACTTCTTAGGAGGCCATTTCCATCGGTGGACATAGCTTTTTCTGTAATCATTCGAAAAGAAAACCGTAGGAAATTGGTAATTTCGTCAGAAGAAGTTGTTGAGAAAAAAATAAGTGTGCAAAACGATTAG
Protein sequence
MTAIRGLMSPRRSSRSRAGGKKKTAPPNPEEQQSWRRTDTQIATNSKRRNNLGPPNSSGIHLPKSTLKIASSRRRTEQPPNPNTKIATKNSFGRSNSNLKGGFGFSSSRSLGGSRKYFDSPNASPKPYRSLGTKEELFGSESKAQRILFKIYMEIASHRQGNSSITSYFTKLKVLWDQLAKTYTDNLPQYSSDAIEMLSEHMEREKVIQFLVGLNDSYSSICSKILLRRPFPSVDIAFSVIIRKENRRKLVISSEEVVEKKISVQND
Homology
BLAST of HG10021026 vs. NCBI nr
Match:
TYJ99320.1 (hypothetical protein E5676_scaffold248G005340 [Cucumis melo var. makuwa])
HSP 1 Score: 253.4 bits (646), Expect = 2.1e-63
Identity = 158/260 (60.77%), Postives = 178/260 (68.46%), Query Frame = 0
Query: 1 MTAIRGLMSPRRSSRSRA-GGKKKTAPPNPEEQQSWRRTDTQIATNSKRRNNLGPPNSSG 60
M IRG+M PR S SR+ G + TAPP+PEEQQ R DT+IAT+ K+RN+L SSG
Sbjct: 60 MPEIRGIMPPRISHWSRSRKGHETTAPPDPEEQQRQRGNDTEIATSLKQRNDLSSSGSSG 119
Query: 61 IHLPKSTLK-IASSRRRTEQPPNPNTKIAT---KNSFGRSNSNLKGGFGFSSSRSLGGSR 120
I P+ LK I +S +T+QPPNP+TKI T S S SNLK G +
Sbjct: 120 ICFPEPDLKIIPTSGHQTKQPPNPDTKIQTPTKTTSPPPSRSNLKAGLNLT--------- 179
Query: 121 KYFDSPNASPKPYRSLGTKEELFGSESKAQRILFKIYMEIASHRQGNSSITSYFTKLKVL 180
K+ SPN SP K++ S+S A IL KIY EIA HRQGNSSITSYFTKLK L
Sbjct: 180 KHVGSPNGSP--------KQKFGSSQSNAPIILHKIYREIAFHRQGNSSITSYFTKLKEL 239
Query: 181 WDQLAKTYTDNLPQYSSDAIEMLSEHMEREKVIQFLVGLNDSYSSICSKILLRRPFPSVD 240
WDQLAK Y D PQYSSDAI MLSEHMEREKVIQFLVGLNDSYSS CSKIL RPFP+VD
Sbjct: 240 WDQLAKAYNDLAPQYSSDAINMLSEHMEREKVIQFLVGLNDSYSSTCSKILFMRPFPTVD 299
Query: 241 IAFSVIIRKENRRKLVISSE 256
AFSVIIRKENRRKLV S+
Sbjct: 300 TAFSVIIRKENRRKLVALSQ 302
BLAST of HG10021026 vs. NCBI nr
Match:
KAA0055390.1 (uncharacterized protein E6C27_scaffold80G002350 [Cucumis melo var. makuwa])
HSP 1 Score: 181.8 bits (460), Expect = 7.8e-42
Identity = 119/222 (53.60%), Postives = 140/222 (63.06%), Query Frame = 0
Query: 1 MTAIRGLMSPRRSSRSRA-GGKKKTAPPNPEEQQSWRRTDTQIATNSKRRNNLGPPNSSG 60
M IRG+M PR S SR+ G + TAPP+PEEQQ R DT+IAT+ K+RN+L SSG
Sbjct: 60 MPEIRGIMPPRISHWSRSRKGHETTAPPDPEEQQRQRGNDTEIATSLKQRNDLSSSGSSG 119
Query: 61 IHLPKSTLK-IASSRRRTEQPPNPNTKIAT---KNSFGRSNSNLKGGFGFSSSRSLGGSR 120
I P+ LK I +S +T+QPPNP+ KI T S S SNLK G +
Sbjct: 120 ICFPEPDLKIIPTSGHQTKQPPNPDAKIQTPTKTTSPPPSRSNLKAGLNLT--------- 179
Query: 121 KYFDSPNASPKPYRSLGTKEELFGSESKAQRILFKIYMEIASHRQGNSSITSYFTKLKVL 180
K+ SPN SP K++ S+S A IL KIY EIA HRQGNSSITSYFTKLK L
Sbjct: 180 KHVGSPNGSP--------KQKFGSSQSNAPIILHKIYREIAFHRQGNSSITSYFTKLKEL 239
Query: 181 WDQLAKTYTDNLPQYSSDAIEMLSEHMEREKVIQFLVGLNDS 218
WDQLAK Y D PQYSSDAI MLSEHMEREK++ + NDS
Sbjct: 240 WDQLAKAYNDLAPQYSSDAINMLSEHMEREKIMGVITDNNDS 264
BLAST of HG10021026 vs. NCBI nr
Match:
XP_022137024.1 (uncharacterized protein LOC111008588 [Momordica charantia] >XP_022137025.1 uncharacterized protein LOC111008588 [Momordica charantia] >XP_022137026.1 uncharacterized protein LOC111008588 [Momordica charantia])
HSP 1 Score: 134.0 bits (336), Expect = 1.9e-27
Identity = 114/300 (38.00%), Postives = 156/300 (52.00%), Query Frame = 0
Query: 22 KKTAP------PNPEEQQSWRRTDTQIATNSKRRNNLGPPNS-----SGIHLPKSTLKIA 81
K TAP PNP + + ++ DT+ P +G+ P+ I+
Sbjct: 122 KPTAPIVPSRRPNPNDLHNQKKLDTKTTPKIGGAKPSSPRTQPQRLRNGVEPPRGPTPIS 181
Query: 82 SSRRRTEQPPNPNTKIATKNSFGRSNSNLKGGFGFSSSRSLGGSRKYFDSPNASP----- 141
+ T P P IA S RS+S S GS ++ D N SP
Sbjct: 182 ---KNTTPKPKPAIAIA---SASRSDSPAANSSPSSKHLPSPGSAQHHDMKNHSPYSGGT 241
Query: 142 -------------------------------KPYRSLG--TKEELFGSESKAQRILFKIY 201
Y S+G T EE F +S A RI F+IY
Sbjct: 242 YTPLADPQLNNHLQRLSIDGKDLASIILHANSIYESIGSDTMEESF--QSNAPRI-FQIY 301
Query: 202 MEIASHRQGNSSITSYFTKLKVLWDQLAKTYTDNLPQ-YSSDAIEMLSEHMEREKVIQFL 261
+IASHRQ NSS+TSYFTKLK+LWD+L +TY+D++PQ S A+E LS H+EREKV+QFL
Sbjct: 302 KDIASHRQENSSVTSYFTKLKILWDEL-ETYSDDVPQCCSCGAMEKLSGHVEREKVMQFL 361
Query: 262 VGLNDSYSSICSKILLRRPFPSVDIAFSVIIRKENRRKLVISSE----EVVEKKISVQND 268
+GLN+SYS+IC +ILL +PFP+++ A+S+IIR+E R +LV S E +V+E K +QND
Sbjct: 362 MGLNNSYSTICPQILLIQPFPTMEKAYSIIIREEKRMELVTSLEMVAAKVMENKWLLQND 411
BLAST of HG10021026 vs. NCBI nr
Match:
XP_038895287.1 (hybrid signal transduction histidine kinase L-like isoform X3 [Benincasa hispida])
HSP 1 Score: 132.9 bits (333), Expect = 4.1e-27
Identity = 104/297 (35.02%), Postives = 137/297 (46.13%), Query Frame = 0
Query: 8 MSPRRSSRSRAGGKKKTAPPNPEEQQSWRRTDTQIATNSKRRNNLGPPNSSGIHLPKSTL 67
++P +S+ + KTA NP Q+ + T + P+S P++
Sbjct: 64 INPSKSTSKLVSSRPKTATSNPNGQKKLDKNST--------TKIISKPSS-----PRTPK 123
Query: 68 KIASSRRRTEQPPNPNTKIATKNSFGRSNSNLKGGFGFSSSRSLGGSRKYFDSPNASPKP 127
+ R P PN+K KN + G S S G KYF S N SP
Sbjct: 124 PVTHQTR-----PTPNSKRNVKNRIASCS-------GSRSELSSAGKNKYFHSRNGSPND 183
Query: 128 ------------------------------------------YRSLGTKEELFGSESKAQ 187
Y S+G+ + S
Sbjct: 184 LGSNHRYSAGHYATLHDLHVSDQLQRLSIDDLAGMVLHPNSIYESMGSDTKEASSSQSND 243
Query: 188 RILFKIYMEIASHRQGNSSITSYFTKLKVLWDQLAKTYTDNLPQYSSDAIEMLSEHMERE 247
+F+IY EIA HRQ NSSITSYFTKL+ LWD+LA TD L A E LSE+MERE
Sbjct: 244 SRMFQIYKEIAFHRQENSSITSYFTKLEALWDELATFKTDLLQCSCGGATEKLSEYMERE 303
Query: 248 KVIQFLVGLNDSYSSICSKILLRRPFPSVDIAFSVIIRKENRRKLVISSEEVVEKKI 263
KV+QFLVGLNDSYS IC++ILL PFP+++ A+S +IR+E R+LV+ E V K I
Sbjct: 304 KVMQFLVGLNDSYSKICNQILLSTPFPTMEKAYSAVIREEKHRELVVELESVAGKVI 335
BLAST of HG10021026 vs. NCBI nr
Match:
XP_022954810.1 (serine/arginine repetitive matrix protein 1-like [Cucurbita moschata])
HSP 1 Score: 132.5 bits (332), Expect = 5.4e-27
Identity = 76/137 (55.47%), Postives = 96/137 (70.07%), Query Frame = 0
Query: 128 YRSLG--TKEELFGSESKAQRILFKIYMEIASHRQGNSSITSYFTKLKVLWDQLAKTYTD 187
Y SL TKEE S+ +F+IY EIASH QGNSSITSY TKLK LWD+L + Y D
Sbjct: 216 YESLASETKEEECSSQGNNSSRMFQIYKEIASHHQGNSSITSYITKLKALWDEL-EAYID 275
Query: 188 NLPQYSSDAIEMLSEHMEREKVIQFLVGLNDSYSSICSKILLRRPFPSVDIAFSVIIRKE 247
P+ S + E SE +EREKV+QFL+GLNDSYS+IC++IL +PFP+V+ A I+R+E
Sbjct: 276 T-PKCSCGSTEKQSEQIEREKVMQFLIGLNDSYSTICAQILHMKPFPTVEKACCAILREE 335
Query: 248 NRRKLVISSEEVVEKKI 263
RR+LV+S E V K I
Sbjct: 336 KRRELVLSLEIVAAKVI 350
BLAST of HG10021026 vs. ExPASy TrEMBL
Match:
A0A5D3BHR0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G005340 PE=4 SV=1)
HSP 1 Score: 253.4 bits (646), Expect = 1.0e-63
Identity = 158/260 (60.77%), Postives = 178/260 (68.46%), Query Frame = 0
Query: 1 MTAIRGLMSPRRSSRSRA-GGKKKTAPPNPEEQQSWRRTDTQIATNSKRRNNLGPPNSSG 60
M IRG+M PR S SR+ G + TAPP+PEEQQ R DT+IAT+ K+RN+L SSG
Sbjct: 60 MPEIRGIMPPRISHWSRSRKGHETTAPPDPEEQQRQRGNDTEIATSLKQRNDLSSSGSSG 119
Query: 61 IHLPKSTLK-IASSRRRTEQPPNPNTKIAT---KNSFGRSNSNLKGGFGFSSSRSLGGSR 120
I P+ LK I +S +T+QPPNP+TKI T S S SNLK G +
Sbjct: 120 ICFPEPDLKIIPTSGHQTKQPPNPDTKIQTPTKTTSPPPSRSNLKAGLNLT--------- 179
Query: 121 KYFDSPNASPKPYRSLGTKEELFGSESKAQRILFKIYMEIASHRQGNSSITSYFTKLKVL 180
K+ SPN SP K++ S+S A IL KIY EIA HRQGNSSITSYFTKLK L
Sbjct: 180 KHVGSPNGSP--------KQKFGSSQSNAPIILHKIYREIAFHRQGNSSITSYFTKLKEL 239
Query: 181 WDQLAKTYTDNLPQYSSDAIEMLSEHMEREKVIQFLVGLNDSYSSICSKILLRRPFPSVD 240
WDQLAK Y D PQYSSDAI MLSEHMEREKVIQFLVGLNDSYSS CSKIL RPFP+VD
Sbjct: 240 WDQLAKAYNDLAPQYSSDAINMLSEHMEREKVIQFLVGLNDSYSSTCSKILFMRPFPTVD 299
Query: 241 IAFSVIIRKENRRKLVISSE 256
AFSVIIRKENRRKLV S+
Sbjct: 300 TAFSVIIRKENRRKLVALSQ 302
BLAST of HG10021026 vs. ExPASy TrEMBL
Match:
A0A5A7UJM8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold80G002350 PE=4 SV=1)
HSP 1 Score: 181.8 bits (460), Expect = 3.8e-42
Identity = 119/222 (53.60%), Postives = 140/222 (63.06%), Query Frame = 0
Query: 1 MTAIRGLMSPRRSSRSRA-GGKKKTAPPNPEEQQSWRRTDTQIATNSKRRNNLGPPNSSG 60
M IRG+M PR S SR+ G + TAPP+PEEQQ R DT+IAT+ K+RN+L SSG
Sbjct: 60 MPEIRGIMPPRISHWSRSRKGHETTAPPDPEEQQRQRGNDTEIATSLKQRNDLSSSGSSG 119
Query: 61 IHLPKSTLK-IASSRRRTEQPPNPNTKIAT---KNSFGRSNSNLKGGFGFSSSRSLGGSR 120
I P+ LK I +S +T+QPPNP+ KI T S S SNLK G +
Sbjct: 120 ICFPEPDLKIIPTSGHQTKQPPNPDAKIQTPTKTTSPPPSRSNLKAGLNLT--------- 179
Query: 121 KYFDSPNASPKPYRSLGTKEELFGSESKAQRILFKIYMEIASHRQGNSSITSYFTKLKVL 180
K+ SPN SP K++ S+S A IL KIY EIA HRQGNSSITSYFTKLK L
Sbjct: 180 KHVGSPNGSP--------KQKFGSSQSNAPIILHKIYREIAFHRQGNSSITSYFTKLKEL 239
Query: 181 WDQLAKTYTDNLPQYSSDAIEMLSEHMEREKVIQFLVGLNDS 218
WDQLAK Y D PQYSSDAI MLSEHMEREK++ + NDS
Sbjct: 240 WDQLAKAYNDLAPQYSSDAINMLSEHMEREKIMGVITDNNDS 264
BLAST of HG10021026 vs. ExPASy TrEMBL
Match:
A0A6J1C5Z8 (uncharacterized protein LOC111008588 OS=Momordica charantia OX=3673 GN=LOC111008588 PE=4 SV=1)
HSP 1 Score: 134.0 bits (336), Expect = 9.0e-28
Identity = 114/300 (38.00%), Postives = 156/300 (52.00%), Query Frame = 0
Query: 22 KKTAP------PNPEEQQSWRRTDTQIATNSKRRNNLGPPNS-----SGIHLPKSTLKIA 81
K TAP PNP + + ++ DT+ P +G+ P+ I+
Sbjct: 122 KPTAPIVPSRRPNPNDLHNQKKLDTKTTPKIGGAKPSSPRTQPQRLRNGVEPPRGPTPIS 181
Query: 82 SSRRRTEQPPNPNTKIATKNSFGRSNSNLKGGFGFSSSRSLGGSRKYFDSPNASP----- 141
+ T P P IA S RS+S S GS ++ D N SP
Sbjct: 182 ---KNTTPKPKPAIAIA---SASRSDSPAANSSPSSKHLPSPGSAQHHDMKNHSPYSGGT 241
Query: 142 -------------------------------KPYRSLG--TKEELFGSESKAQRILFKIY 201
Y S+G T EE F +S A RI F+IY
Sbjct: 242 YTPLADPQLNNHLQRLSIDGKDLASIILHANSIYESIGSDTMEESF--QSNAPRI-FQIY 301
Query: 202 MEIASHRQGNSSITSYFTKLKVLWDQLAKTYTDNLPQ-YSSDAIEMLSEHMEREKVIQFL 261
+IASHRQ NSS+TSYFTKLK+LWD+L +TY+D++PQ S A+E LS H+EREKV+QFL
Sbjct: 302 KDIASHRQENSSVTSYFTKLKILWDEL-ETYSDDVPQCCSCGAMEKLSGHVEREKVMQFL 361
Query: 262 VGLNDSYSSICSKILLRRPFPSVDIAFSVIIRKENRRKLVISSE----EVVEKKISVQND 268
+GLN+SYS+IC +ILL +PFP+++ A+S+IIR+E R +LV S E +V+E K +QND
Sbjct: 362 MGLNNSYSTICPQILLIQPFPTMEKAYSIIIREEKRMELVTSLEMVAAKVMENKWLLQND 411
BLAST of HG10021026 vs. ExPASy TrEMBL
Match:
A0A6J1GTG4 (serine/arginine repetitive matrix protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111456959 PE=4 SV=1)
HSP 1 Score: 132.5 bits (332), Expect = 2.6e-27
Identity = 76/137 (55.47%), Postives = 96/137 (70.07%), Query Frame = 0
Query: 128 YRSLG--TKEELFGSESKAQRILFKIYMEIASHRQGNSSITSYFTKLKVLWDQLAKTYTD 187
Y SL TKEE S+ +F+IY EIASH QGNSSITSY TKLK LWD+L + Y D
Sbjct: 216 YESLASETKEEECSSQGNNSSRMFQIYKEIASHHQGNSSITSYITKLKALWDEL-EAYID 275
Query: 188 NLPQYSSDAIEMLSEHMEREKVIQFLVGLNDSYSSICSKILLRRPFPSVDIAFSVIIRKE 247
P+ S + E SE +EREKV+QFL+GLNDSYS+IC++IL +PFP+V+ A I+R+E
Sbjct: 276 T-PKCSCGSTEKQSEQIEREKVMQFLIGLNDSYSTICAQILHMKPFPTVEKACCAILREE 335
Query: 248 NRRKLVISSEEVVEKKI 263
RR+LV+S E V K I
Sbjct: 336 KRRELVLSLEIVAAKVI 350
BLAST of HG10021026 vs. ExPASy TrEMBL
Match:
A0A6J1C6Z1 (uncharacterized protein LOC111008978 OS=Momordica charantia OX=3673 GN=LOC111008978 PE=4 SV=1)
HSP 1 Score: 118.6 bits (296), Expect = 3.9e-23
Identity = 67/124 (54.03%), Postives = 89/124 (71.77%), Query Frame = 0
Query: 128 YRSLGTKEELFGSESKAQRILFKIYMEIASHRQGNSSITSYFTKLKVLWDQLAKTYTDNL 187
Y+ +G+ + S +F+IY ASHRQ +SS+TSYF KLK+LWDQL + Y+D L
Sbjct: 232 YKPVGSNTKQEWSSQSNDSEIFQIYKGFASHRQKSSSVTSYFKKLKILWDQL-RNYSD-L 291
Query: 188 PQ-YSSDAIEMLSEHMEREKVIQFLVGLNDSYSSICSKILLRRPFPSVDIAFSVIIRKEN 247
PQ YS A + LSEH+EREKVIQFLVGLNDSYS+I S+IL RP P+V+ A+ + I++E
Sbjct: 292 PQCYSLGAKQKLSEHVEREKVIQFLVGLNDSYSTIVSQILQIRPLPTVEKAYFLTIQEEK 351
Query: 248 RRKL 251
+R L
Sbjct: 352 QRAL 353
BLAST of HG10021026 vs. TAIR 10
Match:
AT1G21280.1 (CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein (InterPro:IPR005162); Has 707 Blast hits to 705 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 703; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )
HSP 1 Score: 49.3 bits (116), Expect = 5.6e-06
Identity = 30/109 (27.52%), Postives = 62/109 (56.88%), Query Frame = 0
Query: 148 LFKIYMEIASHRQGNSSITSYFTKLKVLWDQLAKTYTDNLPQ-----YSSDAIEMLSEHM 207
++++ +A+ RQG S+ YF KL +W +L++ Y +P+ + + + E
Sbjct: 127 IYQLRRRLATLRQGGDSVEEYFGKLSKVWMELSE-YAP-IPECKCGGCNCECTKRAEEAR 186
Query: 208 EREKVIQFLVG--LNDSYSSICSKILLRRPFPSVDIAFSVIIRKENRRK 250
E+E+ +FL+G LN + ++ +KI+ ++P PS+ AF+++ E+ K
Sbjct: 187 EKEQRYEFLMGLKLNQGFEAVTTKIMFQKPPPSLHEAFAMVKDAESMMK 233
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
TYJ99320.1 | 2.1e-63 | 60.77 | hypothetical protein E5676_scaffold248G005340 [Cucumis melo var. makuwa] | [more] |
KAA0055390.1 | 7.8e-42 | 53.60 | uncharacterized protein E6C27_scaffold80G002350 [Cucumis melo var. makuwa] | [more] |
XP_022137024.1 | 1.9e-27 | 38.00 | uncharacterized protein LOC111008588 [Momordica charantia] >XP_022137025.1 uncha... | [more] |
XP_038895287.1 | 4.1e-27 | 35.02 | hybrid signal transduction histidine kinase L-like isoform X3 [Benincasa hispida... | [more] |
XP_022954810.1 | 5.4e-27 | 55.47 | serine/arginine repetitive matrix protein 1-like [Cucurbita moschata] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A5D3BHR0 | 1.0e-63 | 60.77 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
A0A5A7UJM8 | 3.8e-42 | 53.60 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... | [more] |
A0A6J1C5Z8 | 9.0e-28 | 38.00 | uncharacterized protein LOC111008588 OS=Momordica charantia OX=3673 GN=LOC111008... | [more] |
A0A6J1GTG4 | 2.6e-27 | 55.47 | serine/arginine repetitive matrix protein 1-like OS=Cucurbita moschata OX=3662 G... | [more] |
A0A6J1C6Z1 | 3.9e-23 | 54.03 | uncharacterized protein LOC111008978 OS=Momordica charantia OX=3673 GN=LOC111008... | [more] |
Match Name | E-value | Identity | Description | |
AT1G21280.1 | 5.6e-06 | 27.52 | CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein (InterPro:IPR005162); Ha... | [more] |