HG10021026 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview
NameHG10021026
Typegene
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Descriptionserine/arginine repetitive matrix protein 1-like
LocationChr05: 4678353 .. 4679156 (+)
RNA-Seq ExpressionHG10021026
SyntenyHG10021026
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACGGCAATAAGAGGGCTTATGAGTCCCCGAAGATCCTCACGGTCACGCGCAGGGGGAAAGAAGAAGACAGCGCCGCCCAATCCGGAGGAGCAACAAAGTTGGAGAAGGACAGACACCCAAATAGCCACCAACTCAAAACGAAGAAACAACCTCGGACCTCCAAATTCTTCAGGTATCCACTTACCAAAATCCACTTTAAAGATCGCCTCCTCACGCCGACGAACAGAACAACCCCCAAATCCCAACACTAAAATCGCCACAAAAAATTCATTTGGGCGTTCAAACAGCAATTTAAAAGGTGGGTTTGGCTTTAGTTCGTCAAGATCCCTTGGTGGGAGTCGTAAATATTTTGATTCTCCAAATGCTTCTCCCAAGCCATACCGGAGCTTAGGTACAAAAGAAGAATTATTTGGTTCTGAAAGCAAGGCTCAAAGAATATTATTTAAAATTTACATGGAAATTGCATCTCATCGTCAAGGAAACTCATCTATTACATCTTACTTCACAAAGCTCAAGGTATTATGGGATCAACTTGCAAAAACCTATACTGACAATTTGCCTCAATATTCATCAGATGCAATTGAGATGCTGAGTGAACATATGGAAAGAGAAAAGGTAATACAATTTCTTGTTGGACTAAATGATTCTTATTCCTCCATTTGTTCTAAAATACTTCTTAGGAGGCCATTTCCATCGGTGGACATAGCTTTTTCTGTAATCATTCGAAAAGAAAACCGTAGGAAATTGGTAATTTCGTCAGAAGAAGTTGTTGAGAAAAAAATAAGTGTGCAAAACGATTAG

mRNA sequence

ATGACGGCAATAAGAGGGCTTATGAGTCCCCGAAGATCCTCACGGTCACGCGCAGGGGGAAAGAAGAAGACAGCGCCGCCCAATCCGGAGGAGCAACAAAGTTGGAGAAGGACAGACACCCAAATAGCCACCAACTCAAAACGAAGAAACAACCTCGGACCTCCAAATTCTTCAGGTATCCACTTACCAAAATCCACTTTAAAGATCGCCTCCTCACGCCGACGAACAGAACAACCCCCAAATCCCAACACTAAAATCGCCACAAAAAATTCATTTGGGCGTTCAAACAGCAATTTAAAAGGTGGGTTTGGCTTTAGTTCGTCAAGATCCCTTGGTGGGAGTCGTAAATATTTTGATTCTCCAAATGCTTCTCCCAAGCCATACCGGAGCTTAGGTACAAAAGAAGAATTATTTGGTTCTGAAAGCAAGGCTCAAAGAATATTATTTAAAATTTACATGGAAATTGCATCTCATCGTCAAGGAAACTCATCTATTACATCTTACTTCACAAAGCTCAAGGTATTATGGGATCAACTTGCAAAAACCTATACTGACAATTTGCCTCAATATTCATCAGATGCAATTGAGATGCTGAGTGAACATATGGAAAGAGAAAAGGTAATACAATTTCTTGTTGGACTAAATGATTCTTATTCCTCCATTTGTTCTAAAATACTTCTTAGGAGGCCATTTCCATCGGTGGACATAGCTTTTTCTGTAATCATTCGAAAAGAAAACCGTAGGAAATTGGTAATTTCGTCAGAAGAAGTTGTTGAGAAAAAAATAAGTGTGCAAAACGATTAG

Coding sequence (CDS)

ATGACGGCAATAAGAGGGCTTATGAGTCCCCGAAGATCCTCACGGTCACGCGCAGGGGGAAAGAAGAAGACAGCGCCGCCCAATCCGGAGGAGCAACAAAGTTGGAGAAGGACAGACACCCAAATAGCCACCAACTCAAAACGAAGAAACAACCTCGGACCTCCAAATTCTTCAGGTATCCACTTACCAAAATCCACTTTAAAGATCGCCTCCTCACGCCGACGAACAGAACAACCCCCAAATCCCAACACTAAAATCGCCACAAAAAATTCATTTGGGCGTTCAAACAGCAATTTAAAAGGTGGGTTTGGCTTTAGTTCGTCAAGATCCCTTGGTGGGAGTCGTAAATATTTTGATTCTCCAAATGCTTCTCCCAAGCCATACCGGAGCTTAGGTACAAAAGAAGAATTATTTGGTTCTGAAAGCAAGGCTCAAAGAATATTATTTAAAATTTACATGGAAATTGCATCTCATCGTCAAGGAAACTCATCTATTACATCTTACTTCACAAAGCTCAAGGTATTATGGGATCAACTTGCAAAAACCTATACTGACAATTTGCCTCAATATTCATCAGATGCAATTGAGATGCTGAGTGAACATATGGAAAGAGAAAAGGTAATACAATTTCTTGTTGGACTAAATGATTCTTATTCCTCCATTTGTTCTAAAATACTTCTTAGGAGGCCATTTCCATCGGTGGACATAGCTTTTTCTGTAATCATTCGAAAAGAAAACCGTAGGAAATTGGTAATTTCGTCAGAAGAAGTTGTTGAGAAAAAAATAAGTGTGCAAAACGATTAG

Protein sequence

MTAIRGLMSPRRSSRSRAGGKKKTAPPNPEEQQSWRRTDTQIATNSKRRNNLGPPNSSGIHLPKSTLKIASSRRRTEQPPNPNTKIATKNSFGRSNSNLKGGFGFSSSRSLGGSRKYFDSPNASPKPYRSLGTKEELFGSESKAQRILFKIYMEIASHRQGNSSITSYFTKLKVLWDQLAKTYTDNLPQYSSDAIEMLSEHMEREKVIQFLVGLNDSYSSICSKILLRRPFPSVDIAFSVIIRKENRRKLVISSEEVVEKKISVQND
Homology
BLAST of HG10021026 vs. NCBI nr
Match: TYJ99320.1 (hypothetical protein E5676_scaffold248G005340 [Cucumis melo var. makuwa])

HSP 1 Score: 253.4 bits (646), Expect = 2.1e-63
Identity = 158/260 (60.77%), Postives = 178/260 (68.46%), Query Frame = 0

Query: 1   MTAIRGLMSPRRSSRSRA-GGKKKTAPPNPEEQQSWRRTDTQIATNSKRRNNLGPPNSSG 60
           M  IRG+M PR S  SR+  G + TAPP+PEEQQ  R  DT+IAT+ K+RN+L    SSG
Sbjct: 60  MPEIRGIMPPRISHWSRSRKGHETTAPPDPEEQQRQRGNDTEIATSLKQRNDLSSSGSSG 119

Query: 61  IHLPKSTLK-IASSRRRTEQPPNPNTKIAT---KNSFGRSNSNLKGGFGFSSSRSLGGSR 120
           I  P+  LK I +S  +T+QPPNP+TKI T     S   S SNLK G   +         
Sbjct: 120 ICFPEPDLKIIPTSGHQTKQPPNPDTKIQTPTKTTSPPPSRSNLKAGLNLT--------- 179

Query: 121 KYFDSPNASPKPYRSLGTKEELFGSESKAQRILFKIYMEIASHRQGNSSITSYFTKLKVL 180
           K+  SPN SP        K++   S+S A  IL KIY EIA HRQGNSSITSYFTKLK L
Sbjct: 180 KHVGSPNGSP--------KQKFGSSQSNAPIILHKIYREIAFHRQGNSSITSYFTKLKEL 239

Query: 181 WDQLAKTYTDNLPQYSSDAIEMLSEHMEREKVIQFLVGLNDSYSSICSKILLRRPFPSVD 240
           WDQLAK Y D  PQYSSDAI MLSEHMEREKVIQFLVGLNDSYSS CSKIL  RPFP+VD
Sbjct: 240 WDQLAKAYNDLAPQYSSDAINMLSEHMEREKVIQFLVGLNDSYSSTCSKILFMRPFPTVD 299

Query: 241 IAFSVIIRKENRRKLVISSE 256
            AFSVIIRKENRRKLV  S+
Sbjct: 300 TAFSVIIRKENRRKLVALSQ 302

BLAST of HG10021026 vs. NCBI nr
Match: KAA0055390.1 (uncharacterized protein E6C27_scaffold80G002350 [Cucumis melo var. makuwa])

HSP 1 Score: 181.8 bits (460), Expect = 7.8e-42
Identity = 119/222 (53.60%), Postives = 140/222 (63.06%), Query Frame = 0

Query: 1   MTAIRGLMSPRRSSRSRA-GGKKKTAPPNPEEQQSWRRTDTQIATNSKRRNNLGPPNSSG 60
           M  IRG+M PR S  SR+  G + TAPP+PEEQQ  R  DT+IAT+ K+RN+L    SSG
Sbjct: 60  MPEIRGIMPPRISHWSRSRKGHETTAPPDPEEQQRQRGNDTEIATSLKQRNDLSSSGSSG 119

Query: 61  IHLPKSTLK-IASSRRRTEQPPNPNTKIAT---KNSFGRSNSNLKGGFGFSSSRSLGGSR 120
           I  P+  LK I +S  +T+QPPNP+ KI T     S   S SNLK G   +         
Sbjct: 120 ICFPEPDLKIIPTSGHQTKQPPNPDAKIQTPTKTTSPPPSRSNLKAGLNLT--------- 179

Query: 121 KYFDSPNASPKPYRSLGTKEELFGSESKAQRILFKIYMEIASHRQGNSSITSYFTKLKVL 180
           K+  SPN SP        K++   S+S A  IL KIY EIA HRQGNSSITSYFTKLK L
Sbjct: 180 KHVGSPNGSP--------KQKFGSSQSNAPIILHKIYREIAFHRQGNSSITSYFTKLKEL 239

Query: 181 WDQLAKTYTDNLPQYSSDAIEMLSEHMEREKVIQFLVGLNDS 218
           WDQLAK Y D  PQYSSDAI MLSEHMEREK++  +   NDS
Sbjct: 240 WDQLAKAYNDLAPQYSSDAINMLSEHMEREKIMGVITDNNDS 264

BLAST of HG10021026 vs. NCBI nr
Match: XP_022137024.1 (uncharacterized protein LOC111008588 [Momordica charantia] >XP_022137025.1 uncharacterized protein LOC111008588 [Momordica charantia] >XP_022137026.1 uncharacterized protein LOC111008588 [Momordica charantia])

HSP 1 Score: 134.0 bits (336), Expect = 1.9e-27
Identity = 114/300 (38.00%), Postives = 156/300 (52.00%), Query Frame = 0

Query: 22  KKTAP------PNPEEQQSWRRTDTQIATNSKRRNNLGPPNS-----SGIHLPKSTLKIA 81
           K TAP      PNP +  + ++ DT+            P        +G+  P+    I+
Sbjct: 122 KPTAPIVPSRRPNPNDLHNQKKLDTKTTPKIGGAKPSSPRTQPQRLRNGVEPPRGPTPIS 181

Query: 82  SSRRRTEQPPNPNTKIATKNSFGRSNSNLKGGFGFSSSRSLGGSRKYFDSPNASP----- 141
              + T   P P   IA   S  RS+S        S      GS ++ D  N SP     
Sbjct: 182 ---KNTTPKPKPAIAIA---SASRSDSPAANSSPSSKHLPSPGSAQHHDMKNHSPYSGGT 241

Query: 142 -------------------------------KPYRSLG--TKEELFGSESKAQRILFKIY 201
                                            Y S+G  T EE F  +S A RI F+IY
Sbjct: 242 YTPLADPQLNNHLQRLSIDGKDLASIILHANSIYESIGSDTMEESF--QSNAPRI-FQIY 301

Query: 202 MEIASHRQGNSSITSYFTKLKVLWDQLAKTYTDNLPQ-YSSDAIEMLSEHMEREKVIQFL 261
            +IASHRQ NSS+TSYFTKLK+LWD+L +TY+D++PQ  S  A+E LS H+EREKV+QFL
Sbjct: 302 KDIASHRQENSSVTSYFTKLKILWDEL-ETYSDDVPQCCSCGAMEKLSGHVEREKVMQFL 361

Query: 262 VGLNDSYSSICSKILLRRPFPSVDIAFSVIIRKENRRKLVISSE----EVVEKKISVQND 268
           +GLN+SYS+IC +ILL +PFP+++ A+S+IIR+E R +LV S E    +V+E K  +QND
Sbjct: 362 MGLNNSYSTICPQILLIQPFPTMEKAYSIIIREEKRMELVTSLEMVAAKVMENKWLLQND 411

BLAST of HG10021026 vs. NCBI nr
Match: XP_038895287.1 (hybrid signal transduction histidine kinase L-like isoform X3 [Benincasa hispida])

HSP 1 Score: 132.9 bits (333), Expect = 4.1e-27
Identity = 104/297 (35.02%), Postives = 137/297 (46.13%), Query Frame = 0

Query: 8   MSPRRSSRSRAGGKKKTAPPNPEEQQSWRRTDTQIATNSKRRNNLGPPNSSGIHLPKSTL 67
           ++P +S+      + KTA  NP  Q+   +  T           +  P+S     P++  
Sbjct: 64  INPSKSTSKLVSSRPKTATSNPNGQKKLDKNST--------TKIISKPSS-----PRTPK 123

Query: 68  KIASSRRRTEQPPNPNTKIATKNSFGRSNSNLKGGFGFSSSRSLGGSRKYFDSPNASPKP 127
            +    R     P PN+K   KN     +       G  S  S  G  KYF S N SP  
Sbjct: 124 PVTHQTR-----PTPNSKRNVKNRIASCS-------GSRSELSSAGKNKYFHSRNGSPND 183

Query: 128 ------------------------------------------YRSLGTKEELFGSESKAQ 187
                                                     Y S+G+  +   S     
Sbjct: 184 LGSNHRYSAGHYATLHDLHVSDQLQRLSIDDLAGMVLHPNSIYESMGSDTKEASSSQSND 243

Query: 188 RILFKIYMEIASHRQGNSSITSYFTKLKVLWDQLAKTYTDNLPQYSSDAIEMLSEHMERE 247
             +F+IY EIA HRQ NSSITSYFTKL+ LWD+LA   TD L      A E LSE+MERE
Sbjct: 244 SRMFQIYKEIAFHRQENSSITSYFTKLEALWDELATFKTDLLQCSCGGATEKLSEYMERE 303

Query: 248 KVIQFLVGLNDSYSSICSKILLRRPFPSVDIAFSVIIRKENRRKLVISSEEVVEKKI 263
           KV+QFLVGLNDSYS IC++ILL  PFP+++ A+S +IR+E  R+LV+  E V  K I
Sbjct: 304 KVMQFLVGLNDSYSKICNQILLSTPFPTMEKAYSAVIREEKHRELVVELESVAGKVI 335

BLAST of HG10021026 vs. NCBI nr
Match: XP_022954810.1 (serine/arginine repetitive matrix protein 1-like [Cucurbita moschata])

HSP 1 Score: 132.5 bits (332), Expect = 5.4e-27
Identity = 76/137 (55.47%), Postives = 96/137 (70.07%), Query Frame = 0

Query: 128 YRSLG--TKEELFGSESKAQRILFKIYMEIASHRQGNSSITSYFTKLKVLWDQLAKTYTD 187
           Y SL   TKEE   S+      +F+IY EIASH QGNSSITSY TKLK LWD+L + Y D
Sbjct: 216 YESLASETKEEECSSQGNNSSRMFQIYKEIASHHQGNSSITSYITKLKALWDEL-EAYID 275

Query: 188 NLPQYSSDAIEMLSEHMEREKVIQFLVGLNDSYSSICSKILLRRPFPSVDIAFSVIIRKE 247
             P+ S  + E  SE +EREKV+QFL+GLNDSYS+IC++IL  +PFP+V+ A   I+R+E
Sbjct: 276 T-PKCSCGSTEKQSEQIEREKVMQFLIGLNDSYSTICAQILHMKPFPTVEKACCAILREE 335

Query: 248 NRRKLVISSEEVVEKKI 263
            RR+LV+S E V  K I
Sbjct: 336 KRRELVLSLEIVAAKVI 350

BLAST of HG10021026 vs. ExPASy TrEMBL
Match: A0A5D3BHR0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G005340 PE=4 SV=1)

HSP 1 Score: 253.4 bits (646), Expect = 1.0e-63
Identity = 158/260 (60.77%), Postives = 178/260 (68.46%), Query Frame = 0

Query: 1   MTAIRGLMSPRRSSRSRA-GGKKKTAPPNPEEQQSWRRTDTQIATNSKRRNNLGPPNSSG 60
           M  IRG+M PR S  SR+  G + TAPP+PEEQQ  R  DT+IAT+ K+RN+L    SSG
Sbjct: 60  MPEIRGIMPPRISHWSRSRKGHETTAPPDPEEQQRQRGNDTEIATSLKQRNDLSSSGSSG 119

Query: 61  IHLPKSTLK-IASSRRRTEQPPNPNTKIAT---KNSFGRSNSNLKGGFGFSSSRSLGGSR 120
           I  P+  LK I +S  +T+QPPNP+TKI T     S   S SNLK G   +         
Sbjct: 120 ICFPEPDLKIIPTSGHQTKQPPNPDTKIQTPTKTTSPPPSRSNLKAGLNLT--------- 179

Query: 121 KYFDSPNASPKPYRSLGTKEELFGSESKAQRILFKIYMEIASHRQGNSSITSYFTKLKVL 180
           K+  SPN SP        K++   S+S A  IL KIY EIA HRQGNSSITSYFTKLK L
Sbjct: 180 KHVGSPNGSP--------KQKFGSSQSNAPIILHKIYREIAFHRQGNSSITSYFTKLKEL 239

Query: 181 WDQLAKTYTDNLPQYSSDAIEMLSEHMEREKVIQFLVGLNDSYSSICSKILLRRPFPSVD 240
           WDQLAK Y D  PQYSSDAI MLSEHMEREKVIQFLVGLNDSYSS CSKIL  RPFP+VD
Sbjct: 240 WDQLAKAYNDLAPQYSSDAINMLSEHMEREKVIQFLVGLNDSYSSTCSKILFMRPFPTVD 299

Query: 241 IAFSVIIRKENRRKLVISSE 256
            AFSVIIRKENRRKLV  S+
Sbjct: 300 TAFSVIIRKENRRKLVALSQ 302

BLAST of HG10021026 vs. ExPASy TrEMBL
Match: A0A5A7UJM8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold80G002350 PE=4 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 3.8e-42
Identity = 119/222 (53.60%), Postives = 140/222 (63.06%), Query Frame = 0

Query: 1   MTAIRGLMSPRRSSRSRA-GGKKKTAPPNPEEQQSWRRTDTQIATNSKRRNNLGPPNSSG 60
           M  IRG+M PR S  SR+  G + TAPP+PEEQQ  R  DT+IAT+ K+RN+L    SSG
Sbjct: 60  MPEIRGIMPPRISHWSRSRKGHETTAPPDPEEQQRQRGNDTEIATSLKQRNDLSSSGSSG 119

Query: 61  IHLPKSTLK-IASSRRRTEQPPNPNTKIAT---KNSFGRSNSNLKGGFGFSSSRSLGGSR 120
           I  P+  LK I +S  +T+QPPNP+ KI T     S   S SNLK G   +         
Sbjct: 120 ICFPEPDLKIIPTSGHQTKQPPNPDAKIQTPTKTTSPPPSRSNLKAGLNLT--------- 179

Query: 121 KYFDSPNASPKPYRSLGTKEELFGSESKAQRILFKIYMEIASHRQGNSSITSYFTKLKVL 180
           K+  SPN SP        K++   S+S A  IL KIY EIA HRQGNSSITSYFTKLK L
Sbjct: 180 KHVGSPNGSP--------KQKFGSSQSNAPIILHKIYREIAFHRQGNSSITSYFTKLKEL 239

Query: 181 WDQLAKTYTDNLPQYSSDAIEMLSEHMEREKVIQFLVGLNDS 218
           WDQLAK Y D  PQYSSDAI MLSEHMEREK++  +   NDS
Sbjct: 240 WDQLAKAYNDLAPQYSSDAINMLSEHMEREKIMGVITDNNDS 264

BLAST of HG10021026 vs. ExPASy TrEMBL
Match: A0A6J1C5Z8 (uncharacterized protein LOC111008588 OS=Momordica charantia OX=3673 GN=LOC111008588 PE=4 SV=1)

HSP 1 Score: 134.0 bits (336), Expect = 9.0e-28
Identity = 114/300 (38.00%), Postives = 156/300 (52.00%), Query Frame = 0

Query: 22  KKTAP------PNPEEQQSWRRTDTQIATNSKRRNNLGPPNS-----SGIHLPKSTLKIA 81
           K TAP      PNP +  + ++ DT+            P        +G+  P+    I+
Sbjct: 122 KPTAPIVPSRRPNPNDLHNQKKLDTKTTPKIGGAKPSSPRTQPQRLRNGVEPPRGPTPIS 181

Query: 82  SSRRRTEQPPNPNTKIATKNSFGRSNSNLKGGFGFSSSRSLGGSRKYFDSPNASP----- 141
              + T   P P   IA   S  RS+S        S      GS ++ D  N SP     
Sbjct: 182 ---KNTTPKPKPAIAIA---SASRSDSPAANSSPSSKHLPSPGSAQHHDMKNHSPYSGGT 241

Query: 142 -------------------------------KPYRSLG--TKEELFGSESKAQRILFKIY 201
                                            Y S+G  T EE F  +S A RI F+IY
Sbjct: 242 YTPLADPQLNNHLQRLSIDGKDLASIILHANSIYESIGSDTMEESF--QSNAPRI-FQIY 301

Query: 202 MEIASHRQGNSSITSYFTKLKVLWDQLAKTYTDNLPQ-YSSDAIEMLSEHMEREKVIQFL 261
            +IASHRQ NSS+TSYFTKLK+LWD+L +TY+D++PQ  S  A+E LS H+EREKV+QFL
Sbjct: 302 KDIASHRQENSSVTSYFTKLKILWDEL-ETYSDDVPQCCSCGAMEKLSGHVEREKVMQFL 361

Query: 262 VGLNDSYSSICSKILLRRPFPSVDIAFSVIIRKENRRKLVISSE----EVVEKKISVQND 268
           +GLN+SYS+IC +ILL +PFP+++ A+S+IIR+E R +LV S E    +V+E K  +QND
Sbjct: 362 MGLNNSYSTICPQILLIQPFPTMEKAYSIIIREEKRMELVTSLEMVAAKVMENKWLLQND 411

BLAST of HG10021026 vs. ExPASy TrEMBL
Match: A0A6J1GTG4 (serine/arginine repetitive matrix protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111456959 PE=4 SV=1)

HSP 1 Score: 132.5 bits (332), Expect = 2.6e-27
Identity = 76/137 (55.47%), Postives = 96/137 (70.07%), Query Frame = 0

Query: 128 YRSLG--TKEELFGSESKAQRILFKIYMEIASHRQGNSSITSYFTKLKVLWDQLAKTYTD 187
           Y SL   TKEE   S+      +F+IY EIASH QGNSSITSY TKLK LWD+L + Y D
Sbjct: 216 YESLASETKEEECSSQGNNSSRMFQIYKEIASHHQGNSSITSYITKLKALWDEL-EAYID 275

Query: 188 NLPQYSSDAIEMLSEHMEREKVIQFLVGLNDSYSSICSKILLRRPFPSVDIAFSVIIRKE 247
             P+ S  + E  SE +EREKV+QFL+GLNDSYS+IC++IL  +PFP+V+ A   I+R+E
Sbjct: 276 T-PKCSCGSTEKQSEQIEREKVMQFLIGLNDSYSTICAQILHMKPFPTVEKACCAILREE 335

Query: 248 NRRKLVISSEEVVEKKI 263
            RR+LV+S E V  K I
Sbjct: 336 KRRELVLSLEIVAAKVI 350

BLAST of HG10021026 vs. ExPASy TrEMBL
Match: A0A6J1C6Z1 (uncharacterized protein LOC111008978 OS=Momordica charantia OX=3673 GN=LOC111008978 PE=4 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 3.9e-23
Identity = 67/124 (54.03%), Postives = 89/124 (71.77%), Query Frame = 0

Query: 128 YRSLGTKEELFGSESKAQRILFKIYMEIASHRQGNSSITSYFTKLKVLWDQLAKTYTDNL 187
           Y+ +G+  +   S       +F+IY   ASHRQ +SS+TSYF KLK+LWDQL + Y+D L
Sbjct: 232 YKPVGSNTKQEWSSQSNDSEIFQIYKGFASHRQKSSSVTSYFKKLKILWDQL-RNYSD-L 291

Query: 188 PQ-YSSDAIEMLSEHMEREKVIQFLVGLNDSYSSICSKILLRRPFPSVDIAFSVIIRKEN 247
           PQ YS  A + LSEH+EREKVIQFLVGLNDSYS+I S+IL  RP P+V+ A+ + I++E 
Sbjct: 292 PQCYSLGAKQKLSEHVEREKVIQFLVGLNDSYSTIVSQILQIRPLPTVEKAYFLTIQEEK 351

Query: 248 RRKL 251
           +R L
Sbjct: 352 QRAL 353

BLAST of HG10021026 vs. TAIR 10
Match: AT1G21280.1 (CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein (InterPro:IPR005162); Has 707 Blast hits to 705 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 703; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 49.3 bits (116), Expect = 5.6e-06
Identity = 30/109 (27.52%), Postives = 62/109 (56.88%), Query Frame = 0

Query: 148 LFKIYMEIASHRQGNSSITSYFTKLKVLWDQLAKTYTDNLPQ-----YSSDAIEMLSEHM 207
           ++++   +A+ RQG  S+  YF KL  +W +L++ Y   +P+      + +  +   E  
Sbjct: 127 IYQLRRRLATLRQGGDSVEEYFGKLSKVWMELSE-YAP-IPECKCGGCNCECTKRAEEAR 186

Query: 208 EREKVIQFLVG--LNDSYSSICSKILLRRPFPSVDIAFSVIIRKENRRK 250
           E+E+  +FL+G  LN  + ++ +KI+ ++P PS+  AF+++   E+  K
Sbjct: 187 EKEQRYEFLMGLKLNQGFEAVTTKIMFQKPPPSLHEAFAMVKDAESMMK 233

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
TYJ99320.12.1e-6360.77hypothetical protein E5676_scaffold248G005340 [Cucumis melo var. makuwa][more]
KAA0055390.17.8e-4253.60uncharacterized protein E6C27_scaffold80G002350 [Cucumis melo var. makuwa][more]
XP_022137024.11.9e-2738.00uncharacterized protein LOC111008588 [Momordica charantia] >XP_022137025.1 uncha... [more]
XP_038895287.14.1e-2735.02hybrid signal transduction histidine kinase L-like isoform X3 [Benincasa hispida... [more]
XP_022954810.15.4e-2755.47serine/arginine repetitive matrix protein 1-like [Cucurbita moschata][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5D3BHR01.0e-6360.77Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5A7UJM83.8e-4253.60Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A6J1C5Z89.0e-2838.00uncharacterized protein LOC111008588 OS=Momordica charantia OX=3673 GN=LOC111008... [more]
A0A6J1GTG42.6e-2755.47serine/arginine repetitive matrix protein 1-like OS=Cucurbita moschata OX=3662 G... [more]
A0A6J1C6Z13.9e-2354.03uncharacterized protein LOC111008978 OS=Momordica charantia OX=3673 GN=LOC111008... [more]
Match NameE-valueIdentityDescription
AT1G21280.15.6e-0627.52CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein (InterPro:IPR005162); Ha... [more]
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..107
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 27..65
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 72..107
NoneNo IPR availablePANTHERPTHR34222FAMILY NOT NAMEDcoord: 134..249
NoneNo IPR availablePANTHERPTHR34222:SF6OS02G0671800 PROTEINcoord: 134..249

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
HG10021026.1HG10021026.1mRNA