HG10020967 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10020967
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	Deoxycytidylate deaminase-like
Location	Chr05: 4078772 .. 4081554 (-)
RNA-Seq Expression	HG10020967
Synteny	HG10020967

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAACTCCCGCGATCTTGCACTCGTCTCCACAGCCGCTGTCTTGGGTGCCTTCACTTCAGCTCTTGCTTCTCGCTTCTTCTTCAATCATAAAAGGCACCGTCCTGGCTTTGATCTGTCGAGAAATGGCGCTTTCTTGAACAACGGCCCCTCACAGTGTCCTTTCGATCCTTCCAAACGCAAAGGGTTAGAAAATTTATCATGTGCCTGCTTTCATGTTCGTGCAGATCTCTGATTTTGTATCTACCATTAATCCCATTGGCACTAACGCTGTTAGGGTTTAGAGTCTTCAGGATTTTATTTGTTTTCTACTCATACCTTGTTGTCAGTTTGTGTAGTCCCTCTATTTTGATTTTCACGTTCTTTTAATTTTGAGGATGTTACCCAGTTTTGAATTTTGTAAATTATTTGCAGGTTTTTGTCTTGGGATGACTATTTCATGGCCATTGCATTCCTGTCGGCTGAAAGATCGAAGGATCCCAATCGACAGGTGATTATCACGTTCTTATGGGATTTTCGTATTTGTTTCTATGAGATTGTTATTGATTTGTATTCATAAAAGAGGAAAACGATGGGCATCAATTATTTCCATAACTAAAATTCTCTGTTTAAGTGTATATGCTTTAGTTTTTGTATAAGGTTGGATGTTTGAGGATTTGTTGCACAATCAAAACTTGTGTCCCCTTATTTGTTGATACATGTTTGATGTCTGGATTTATGCTCTATGGTGCAGGTTGGCGCATGCCTGGTTAGTCAAAATGGTGTAATTCTTGGTAAGTTTGCTTCAAGGTCTATAAATGGCATTGTTGGTTGGCTGTGTGATACTGATGTGAGACAATGTTTCTAACAAGAACCGGTGGCAAGTAATAGTTGTAATTGTGAGCTTCTACTAATACTTCTATAATACCTCCCTTTGAGGTGGGAGGTTCAAATCTACTTATCCCATGTTGCACTAAAAAAAAAAAGCTTTAACTGTATCTGTATGCAACAAGATCAATTTCTAGGTAATGCACATCAATCAAATATGTAATGCCTGATTATACAGAAATTGTCCACTTCATTACTATATCTGTGTTGCAATAAAGTGTAGATGAAGTCTGCAAATTTGCCATGGTCTATTATGGACGAATGTTAAAGTAGCCTTTCATACTGAGTTGATGCAGTTAACAAAATCGAACATCTGAATTTTTCTTTTATTCATCTGTTATAGGCATAGGATATAATGGGTTTCCAAGAGGATGCTCTGATGACCAGCTTCCTTGGGCAAAGGTTAGTTCCTCATGGAAAACTGAGTTCTCAACTTATTAACAAGCATCTCAGTAATTTTTTTCTTCTTCCTATTGTTCAGAAATCAAAAACCAATGATCCTTTGGAGACAAAGTATCCGTAAGTTTACGAATATGTAAGCTTTTTTATTCAATAAATTTCTGTCGTCTAGAAATCATTAAATTTTCATTTCCTTTTAAGTTCATTTGATTTACTATATGTGCTGATTCTTCATCATTATAGATCCTTGTGCTAAAATAATGTCACTTTCTTACTTATGATTTATTTTTCAATCCCTCAACCCTGTTCTTCTTTGTCTTTAAAATCCTCTTATAGCTATGTTTGTCATGCTGAAGTCAACGCCATCCTAAACACAAATCATGCTTCGGCCAGTGGACAGGTATGTTGTTTTCCCCTGCCCTGCATCTCTTTGAAAATTCTCGTCTGCTTAAGAATGCAAGGTTTCACAGAGCCACACGGACATTCTATCGATATTTGAATGCTGCTAATCAGTACTTGGTCTCTTTGTAATCTTTGCAGAGGCTTTATGTGACCATGTTCCCTTGCAATGAATGTGCAAAAATAATTATTCAGGTCCAGTAATCATTTTTATTTTCATCTTTATAAGCGATTAGACTAGAGTTTGAAGATGAAAGACTGATATTTTCACTGAAAAGTAATGCGCTATAGGGGTTTGCCTAGAAAATGCTATTTACTCCACAAACAGCAGTATTTGAGTCCCCTTTTAGAAGGTGCTCCTTCCTTTTGTGGGCTGGCTTTTTGTATGCCCTTGTGTTCTTTCATTTTTTCTCATGAAAGTGGTTATTCTCGTAAATAAATAAAAAAATTAAAACAGTATTTGACCACTGATTCTTACTATTGTATGTTTTCTTTTAACTACTTCATAGTACTAACTTGTGGACTTTGTTGCAGTCTGGCGTCTCTGAAGTTATTTATTTTGTTGAGAAGAGGATAAACAATTCAAACATTGCATATGTTGCATCTCACAAATTGCTATCTATGGCTGGTGTAAAAGTAAGTCTCTCTGTTACCCTCCATTCTCAACTTCAAATCTTATAACATTGCATCAAGTTTCTAGCTATATCTGGGGTTAAGAAGTAGCATGGAATTTATAATTTCATTAGACCTCTTAGACCAACTCCTTTATTTACTACAACTGCTTTCTTGAAGTTCCTTCAACTTCAATATTTGATAATCAAAATGTCAACTTCGGCTTGAAAGTAAGTGCGACTGAATATGTAAAAGACCACACAAACACCATGTTTTCCTCTTTAGATGGTGAAGTAAAAATATAACATGTTTGCTTGTAGAATCTTTTATGTACGCTAGAAGAGCAAATTTGTGTACAGAATAGAAAATGACAGGCATAGATACATTGCAAGTTATCTCCCTTGTTAAAAGTGACTGATGTGGCCATTCAAATTGCAATTGCAGGTGAGAAAACATCAACCCCTTTCAAATCAGATTCTGATTAAGTTTGAGGATCCTCGTACATGA

mRNA sequence

ATGAACTCCCGCGATCTTGCACTCGTCTCCACAGCCGCTGTCTTGGGTGCCTTCACTTCAGCTCTTGCTTCTCGCTTCTTCTTCAATCATAAAAGGCACCGTCCTGGCTTTGATCTGTCGAGAAATGGCGCTTTCTTGAACAACGGCCCCTCACAGTGTCCTTTCGATCCTTCCAAACGCAAAGGGTTTTTGTCTTGGGATGACTATTTCATGGCCATTGCATTCCTGTCGGCTGAAAGATCGAAGGATCCCAATCGACAGGTTGGCGCATGCCTGGTTAGTCAAAATGGTGTAATTCTTGGCATAGGATATAATGGGTTTCCAAGAGGATGCTCTGATGACCAGCTTCCTTGGGCAAAGAAATCAAAAACCAATGATCCTTTGGAGACAAAGTATCCCTATGTTTGTCATGCTGAAGTCAACGCCATCCTAAACACAAATCATGCTTCGGCCAGTGGACAGTCTGGCGTCTCTGAAGTTATTTATTTTGTTGAGAAGAGGATAAACAATTCAAACATTGCATATGTTGCATCTCACAAATTGCTATCTATGGCTGGTGTAAAAGTGAGAAAACATCAACCCCTTTCAAATCAGATTCTGATTAAGTTTGAGGATCCTCGTACATGA

Coding sequence (CDS)

ATGAACTCCCGCGATCTTGCACTCGTCTCCACAGCCGCTGTCTTGGGTGCCTTCACTTCAGCTCTTGCTTCTCGCTTCTTCTTCAATCATAAAAGGCACCGTCCTGGCTTTGATCTGTCGAGAAATGGCGCTTTCTTGAACAACGGCCCCTCACAGTGTCCTTTCGATCCTTCCAAACGCAAAGGGTTTTTGTCTTGGGATGACTATTTCATGGCCATTGCATTCCTGTCGGCTGAAAGATCGAAGGATCCCAATCGACAGGTTGGCGCATGCCTGGTTAGTCAAAATGGTGTAATTCTTGGCATAGGATATAATGGGTTTCCAAGAGGATGCTCTGATGACCAGCTTCCTTGGGCAAAGAAATCAAAAACCAATGATCCTTTGGAGACAAAGTATCCCTATGTTTGTCATGCTGAAGTCAACGCCATCCTAAACACAAATCATGCTTCGGCCAGTGGACAGTCTGGCGTCTCTGAAGTTATTTATTTTGTTGAGAAGAGGATAAACAATTCAAACATTGCATATGTTGCATCTCACAAATTGCTATCTATGGCTGGTGTAAAAGTGAGAAAACATCAACCCCTTTCAAATCAGATTCTGATTAAGTTTGAGGATCCTCGTACATGA

Protein sequence

MNSRDLALVSTAAVLGAFTSALASRFFFNHKRHRPGFDLSRNGAFLNNGPSQCPFDPSKRKGFLSWDDYFMAIAFLSAERSKDPNRQVGACLVSQNGVILGIGYNGFPRGCSDDQLPWAKKSKTNDPLETKYPYVCHAEVNAILNTNHASASGQSGVSEVIYFVEKRINNSNIAYVASHKLLSMAGVKVRKHQPLSNQILIKFEDPRT

Homology

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BLAST of HG10020967 vs. NCBI nr
Match: XP_038895029.1 (deoxycytidylate deaminase [Benincasa hispida])

HSP 1 Score: 397.9 bits (1021), Expect = 5.4e-107
Identity = 200/226 (88.50%), Postives = 203/226 (89.82%), Query Frame = 0


Query: 1   MNSRDLALVSTAAVLGAFTSALASRFFFNHKRHRPGFDLSRNGAFLNNGPSQCPFDPSKR 60
           MNSRDLALVSTAAVLGAFTSALA RFFFN K+HRP  DLSRNGA LNNGPSQCPFDPSKR
Sbjct: 7   MNSRDLALVSTAAVLGAFTSALACRFFFNPKKHRPQCDLSRNGALLNNGPSQCPFDPSKR 66

Query: 61  KGFLSWDDYFMAIAFLSAERSKDPNRQVGACLVSQNGVILGIGYNGFPRGCSDDQLPWAK 120
           KGFLSWDDYFMAIAFLSAERSKDPNRQVGACLVSQNGVILGIGYNGFPRGCSDDQLPWAK
Sbjct: 67  KGFLSWDDYFMAIAFLSAERSKDPNRQVGACLVSQNGVILGIGYNGFPRGCSDDQLPWAK 126

Query: 121 KSKTNDPLETKYPYVCHAEVNAILNTNHASASG------------------QSGVSEVIY 180
           KSKTN+PLETKYPYVCHAEVNAILNTNHASASG                  QSGVSEVIY
Sbjct: 127 KSKTNNPLETKYPYVCHAEVNAILNTNHASASGQRLYVTMFPCNECAKIIIQSGVSEVIY 186

Query: 181 FVEKRINNSNIAYVASHKLLSMAGVKVRKHQPLSNQILIKFEDPRT 209
           FVEKRINNSN+AYVASHKLLSMAGVKVRKHQPLSNQILIKFEDPRT
Sbjct: 187 FVEKRINNSNVAYVASHKLLSMAGVKVRKHQPLSNQILIKFEDPRT 232

[Close]

BLAST of HG10020967 vs. NCBI nr
Match: XP_008439719.1 (PREDICTED: deoxycytidylate deaminase isoform X1 [Cucumis melo] >KAA0055333.1 deoxycytidylate deaminase isoform X1 [Cucumis melo var. makuwa] >TYJ99258.1 deoxycytidylate deaminase isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 389.4 bits (999), Expect = 1.9e-104
Identity = 196/226 (86.73%), Postives = 201/226 (88.94%), Query Frame = 0


Query: 1   MNSRDLALVSTAAVLGAFTSALASRFFFNHKRHRPGFDLSRNGAFLNNGPSQCPFDPSKR 60
           MNSRDLALVSTAAVLGAFTSALA RFFFN K+HR  FDLSRNGA LNNG SQCPFDPSKR
Sbjct: 1   MNSRDLALVSTAAVLGAFTSALACRFFFNPKKHRSRFDLSRNGALLNNGSSQCPFDPSKR 60

Query: 61  KGFLSWDDYFMAIAFLSAERSKDPNRQVGACLVSQNGVILGIGYNGFPRGCSDDQLPWAK 120
           +GFLSWDDYFMAIAFLSAERSKDPNRQVGACLVSQNGVILGIGYNGFPRGCSDDQLPWAK
Sbjct: 61  EGFLSWDDYFMAIAFLSAERSKDPNRQVGACLVSQNGVILGIGYNGFPRGCSDDQLPWAK 120

Query: 121 KSKTNDPLETKYPYVCHAEVNAILNTNHASASG------------------QSGVSEVIY 180
           KSKTN+PLETKYPYVCHAEVNAILNTNHASASG                  QSGVSEVIY
Sbjct: 121 KSKTNNPLETKYPYVCHAEVNAILNTNHASASGQKLYVTMFPCNECAKIIIQSGVSEVIY 180

Query: 181 FVEKRINNSNIAYVASHKLLSMAGVKVRKHQPLSNQILIKFEDPRT 209
           FVEKRINNSN+AYVASHKLLSMAGVKVRKHQPLS+QILIKFEDP T
Sbjct: 181 FVEKRINNSNVAYVASHKLLSMAGVKVRKHQPLSDQILIKFEDPHT 226

[Close]

BLAST of HG10020967 vs. NCBI nr
Match: XP_004145155.1 (deoxycytidylate deaminase [Cucumis sativus] >KGN64411.1 hypothetical protein Csa_013179 [Cucumis sativus])

HSP 1 Score: 379.8 bits (974), Expect = 1.5e-101
Identity = 191/226 (84.51%), Postives = 199/226 (88.05%), Query Frame = 0


Query: 1   MNSRDLALVSTAAVLGAFTSALASRFFFNHKRHRPGFDLSRNGAFLNNGPSQCPFDPSKR 60
           MNSRDLALVSTAAVL AFTSA+A RFFF+ K+HR  FDLSRNGA LNNG S+CPFDPSKR
Sbjct: 1   MNSRDLALVSTAAVLSAFTSAIACRFFFSPKKHRSRFDLSRNGALLNNGSSRCPFDPSKR 60

Query: 61  KGFLSWDDYFMAIAFLSAERSKDPNRQVGACLVSQNGVILGIGYNGFPRGCSDDQLPWAK 120
           +GFLSWDDYFMAIAFLSAERSKDPNRQVGACLVSQNGVILGIGYNGFPRGCSDDQLPWAK
Sbjct: 61  EGFLSWDDYFMAIAFLSAERSKDPNRQVGACLVSQNGVILGIGYNGFPRGCSDDQLPWAK 120

Query: 121 KSKTNDPLETKYPYVCHAEVNAILNTNHASASG------------------QSGVSEVIY 180
           KSKTN+PLETKYPYVCHAEVNAILNTNHASASG                  QSGVSEVIY
Sbjct: 121 KSKTNNPLETKYPYVCHAEVNAILNTNHASASGQKLYVTMFPCNECAKIIIQSGVSEVIY 180

Query: 181 FVEKRINNSNIAYVASHKLLSMAGVKVRKHQPLSNQILIKFEDPRT 209
           FVEKRINNSN+AY ASHKLLSMAGVKVRKHQPLS+QILIKFEDP T
Sbjct: 181 FVEKRINNSNVAYFASHKLLSMAGVKVRKHQPLSDQILIKFEDPCT 226

[Close]

BLAST of HG10020967 vs. NCBI nr
Match: XP_022955223.1 (deoxycytidylate deaminase isoform X1 [Cucurbita moschata])

HSP 1 Score: 362.1 bits (928), Expect = 3.3e-96
Identity = 182/226 (80.53%), Postives = 195/226 (86.28%), Query Frame = 0


Query: 1   MNSRDLALVSTAAVLGAFTSALASRFFFNHKRHRPGFDLSRNGAFLNNGPSQCPFDPSKR 60
           MNSR+LALVSTAAV+GA  SA+A RFFFN K+HRP FDLSRN A LNNG SQCPFDPSKR
Sbjct: 1   MNSRELALVSTAAVVGAVASAIACRFFFNPKKHRPQFDLSRNDAPLNNGHSQCPFDPSKR 60

Query: 61  KGFLSWDDYFMAIAFLSAERSKDPNRQVGACLVSQNGVILGIGYNGFPRGCSDDQLPWAK 120
            G+LSWDDYFMAIAFLSAERSKDPNRQVGACLVSQNGVILGIGYNGFPRGC DD+LPWAK
Sbjct: 61  NGYLSWDDYFMAIAFLSAERSKDPNRQVGACLVSQNGVILGIGYNGFPRGCPDDKLPWAK 120

Query: 121 KSKTNDPLETKYPYVCHAEVNAILNTNHASASG------------------QSGVSEVIY 180
           KSKT++PLETKYPYVCHAEVNAILNTNHASASG                  QSGVSEVIY
Sbjct: 121 KSKTSNPLETKYPYVCHAEVNAILNTNHASASGQRLYVTMFPCNECAKVIIQSGVSEVIY 180

Query: 181 FVEKRINNSNIAYVASHKLLSMAGVKVRKHQPLSNQILIKFEDPRT 209
           F+EKR+NNS +AY+ASHKLLSMAGVKVRKHQP SNQILIKFE+P T
Sbjct: 181 FIEKRMNNS-VAYIASHKLLSMAGVKVRKHQPWSNQILIKFEEPHT 225

[Close]

BLAST of HG10020967 vs. NCBI nr
Match: XP_022137275.1 (deoxycytidylate deaminase isoform X1 [Momordica charantia])

HSP 1 Score: 362.1 bits (928), Expect = 3.3e-96
Identity = 180/226 (79.65%), Postives = 192/226 (84.96%), Query Frame = 0


Query: 1   MNSRDLALVSTAAVLGAFTSALASRFFFNHKRHRPGFDLSRNGAFLNNGPSQCPFDPSKR 60
           MNSR+L+LVSTA V G   SA+A RFFFN K+HRP FDL  N A  N  PSQCPFDPSKR
Sbjct: 1   MNSRELSLVSTATVFGVLASAVAFRFFFNPKKHRPRFDLPGNDALSNKAPSQCPFDPSKR 60

Query: 61  KGFLSWDDYFMAIAFLSAERSKDPNRQVGACLVSQNGVILGIGYNGFPRGCSDDQLPWAK 120
           +G+LSWDDYFMAIAFLSAERSKDPNRQVGACLVSQNGVILGIGYNGFPRGC DDQLPWAK
Sbjct: 61  QGYLSWDDYFMAIAFLSAERSKDPNRQVGACLVSQNGVILGIGYNGFPRGCPDDQLPWAK 120

Query: 121 KSKTNDPLETKYPYVCHAEVNAILNTNHASASG------------------QSGVSEVIY 180
           KSKT++PLETKYPYVCHAEVNAILNTNHASASG                  QSGVSEVIY
Sbjct: 121 KSKTSNPLETKYPYVCHAEVNAILNTNHASASGQKLYVTMFPCNECAKIIIQSGVSEVIY 180

Query: 181 FVEKRINNSNIAYVASHKLLSMAGVKVRKHQPLSNQILIKFEDPRT 209
           F+EKRINNS++AYVASHKLLSMAGVKVRKHQPLS+QILIKFEDPRT
Sbjct: 181 FLEKRINNSDVAYVASHKLLSMAGVKVRKHQPLSDQILIKFEDPRT 226

[Close]

BLAST of HG10020967 vs. ExPASy Swiss-Prot
Match: Q5RC69 (Deoxycytidylate deaminase OS=Pongo abelii OX=9601 GN=DCTD PE=2 SV=1)

HSP 1 Score: 153.7 bits (387), Expect = 2.3e-36
Identity = 80/164 (48.78%), Postives = 105/164 (64.02%), Query Frame = 0


Query: 59  KRKGFLSWDDYFMAIAFLSAERSKDPNRQVGACLVSQNGVILGIGYNGFPRGCSDDQLPW 118
           KR  +L W +YFMA+AFLSA+RSKDPN QVGAC+V+    I+GIGYNG P GCSDDQLPW
Sbjct: 8   KRDDYLEWPEYFMAVAFLSAQRSKDPNSQVGACIVNSENKIVGIGYNGMPNGCSDDQLPW 67

Query: 119 AKKSKTNDPLETKYPYVCHAEVNAILNTNHASASG------------------QSGVSEV 178
            + +K  + L+TKYPYVCHAE+NAI+N N     G                  Q+G+ EV
Sbjct: 68  RRTAK--NKLDTKYPYVCHAELNAIMNKNSTDVKGCSMYVALFPCNECAKLIIQAGIKEV 127

Query: 179 IYFVEKRINNSNIAYVASHKLLSMAGVKVRKHQPLSNQILIKFE 205
           I F+  + ++S+ A  A+  L  MAGV  RK  P  ++I+I F+
Sbjct: 128 I-FMSDKYHDSDEA-TAARLLFDMAGVTFRKFIPKCSKIVIDFD 167

[Close]

BLAST of HG10020967 vs. ExPASy Swiss-Prot
Match: P32321 (Deoxycytidylate deaminase OS=Homo sapiens OX=9606 GN=DCTD PE=1 SV=2)

HSP 1 Score: 149.8 bits (377), Expect = 3.3e-35
Identity = 78/164 (47.56%), Postives = 105/164 (64.02%), Query Frame = 0


Query: 59  KRKGFLSWDDYFMAIAFLSAERSKDPNRQVGACLVSQNGVILGIGYNGFPRGCSDDQLPW 118
           KR  +L W +YFMA+AFLSA+RSKDPN QVGAC+V+    I+GIGYNG P GCSDD LPW
Sbjct: 8   KRDDYLEWPEYFMAVAFLSAQRSKDPNSQVGACIVNSENKIVGIGYNGMPNGCSDDVLPW 67

Query: 119 AKKSKTNDPLETKYPYVCHAEVNAILNTNHASASG------------------QSGVSEV 178
            + ++  + L+TKYPYVCHAE+NAI+N N     G                  Q+G+ EV
Sbjct: 68  RRTAE--NKLDTKYPYVCHAELNAIMNKNSTDVKGCSMYVALFPCNECAKLIIQAGIKEV 127

Query: 179 IYFVEKRINNSNIAYVASHKLLSMAGVKVRKHQPLSNQILIKFE 205
           I F+  + ++S+ A  A+  L +MAGV  RK  P  ++I+I F+
Sbjct: 128 I-FMSDKYHDSDEA-TAARLLFNMAGVTFRKFIPKCSKIVIDFD 167

[Close]

BLAST of HG10020967 vs. ExPASy Swiss-Prot
Match: Q8K2D6 (Deoxycytidylate deaminase OS=Mus musculus OX=10090 GN=Dctd PE=2 SV=1)

HSP 1 Score: 147.9 bits (372), Expect = 1.3e-34
Identity = 75/164 (45.73%), Postives = 102/164 (62.20%), Query Frame = 0


Query: 59  KRKGFLSWDDYFMAIAFLSAERSKDPNRQVGACLVSQNGVILGIGYNGFPRGCSDDQLPW 118
           KR  +L W +YFMA+AFLSA+RSKDP+ QVGAC+V+    I+GIGYNG P GCSDD LPW
Sbjct: 8   KRDDYLEWPEYFMAVAFLSAQRSKDPSSQVGACIVNTENKIVGIGYNGMPNGCSDDLLPW 67

Query: 119 AKKSKTNDPLETKYPYVCHAEVNAILNTNHASASG------------------QSGVSEV 178
            + ++  + L+TKYPYVCHAE+NAI+N N A   G                  Q+G+ EV
Sbjct: 68  RRTAE--NKLDTKYPYVCHAELNAIMNKNSADVKGCSMYVALFPCNECAKLIIQAGIKEV 127

Query: 179 IYFVEKRINNSNIAYVASHKLLSMAGVKVRKHQPLSNQILIKFE 205
           I+  +K  ++      A+  L  +AGV  RK  P  ++I+I F+
Sbjct: 128 IFMSDKYHDSEET--TAARLLFKLAGVTFRKFTPKYSKIVIDFD 167

[Close]

BLAST of HG10020967 vs. ExPASy Swiss-Prot
Match: Q5M9G0 (Deoxycytidylate deaminase OS=Rattus norvegicus OX=10116 GN=Dctd PE=2 SV=1)

HSP 1 Score: 147.9 bits (372), Expect = 1.3e-34
Identity = 75/164 (45.73%), Postives = 102/164 (62.20%), Query Frame = 0


Query: 59  KRKGFLSWDDYFMAIAFLSAERSKDPNRQVGACLVSQNGVILGIGYNGFPRGCSDDQLPW 118
           KR  +L W +YFMA+AFLSA+RSKDP+ QVGAC+V+    I+GIGYNG P GCSDD LPW
Sbjct: 8   KRDDYLEWPEYFMAVAFLSAQRSKDPSSQVGACIVNTENKIVGIGYNGMPNGCSDDLLPW 67

Query: 119 AKKSKTNDPLETKYPYVCHAEVNAILNTNHASASG------------------QSGVSEV 178
            + ++  + L+TKYPYVCHAE+NAI+N N A   G                  Q+G+ EV
Sbjct: 68  RRTAE--NKLDTKYPYVCHAELNAIMNKNSADVKGCSMYVALFPCNECAKLIIQAGIKEV 127

Query: 179 IYFVEKRINNSNIAYVASHKLLSMAGVKVRKHQPLSNQILIKFE 205
           I+  +K  ++      A+  L  +AGV  RK  P  ++I+I F+
Sbjct: 128 IFMSDKYHDSEET--TAARLLFKLAGVTFRKFTPKYSKIVIDFD 167

[Close]

BLAST of HG10020967 vs. ExPASy Swiss-Prot
Match: Q9VWA2 (Probable deoxycytidylate deaminase OS=Drosophila melanogaster OX=7227 GN=CG6951 PE=2 SV=1)

HSP 1 Score: 143.7 bits (361), Expect = 2.4e-33
Identity = 78/167 (46.71%), Postives = 97/167 (58.08%), Query Frame = 0


Query: 59  KRKGFLSWDDYFMAIAFLSAERSKDPNRQVGACLVSQNGVILGIGYNGFPRGCSDDQLPW 118
           KRK +L WDDYFMA + LSA+RSKDP  QVGAC+V     I+ IGYNGFPR CSDD  PW
Sbjct: 21  KRKEYLHWDDYFMATSLLSAKRSKDPVTQVGACIVDSQNRIVAIGYNGFPRNCSDDVFPW 80

Query: 119 AKKSKTN---DPLETKYPYVCHAEVNAILNTNHASASG------------------QSGV 178
           +K  K +   DPLE K  YV HAE NAILN+N  S SG                  Q G+
Sbjct: 81  SKAKKGSQEFDPLEDKKMYVVHAEANAILNSNGMSLSGTRLYTTLFPCNECAKLIIQVGI 140

Query: 179 SEVIYFVEKRINNSNIAYVASHKLLSMAGVKVRKHQPLSNQILIKFE 205
           S+V+Y  +K  +     Y AS ++L   GV+ ++H P    I I F+
Sbjct: 141 SQVLYLSDKYADKP--TYRASKRMLDAVGVEYKRHIPQKKTITIDFD 185

[Close]

BLAST of HG10020967 vs. ExPASy TrEMBL
Match: A0A5A7UHA6 (Deoxycytidylate deaminase isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G004700 PE=3 SV=1)

HSP 1 Score: 389.4 bits (999), Expect = 9.3e-105
Identity = 196/226 (86.73%), Postives = 201/226 (88.94%), Query Frame = 0


Query: 1   MNSRDLALVSTAAVLGAFTSALASRFFFNHKRHRPGFDLSRNGAFLNNGPSQCPFDPSKR 60
           MNSRDLALVSTAAVLGAFTSALA RFFFN K+HR  FDLSRNGA LNNG SQCPFDPSKR
Sbjct: 1   MNSRDLALVSTAAVLGAFTSALACRFFFNPKKHRSRFDLSRNGALLNNGSSQCPFDPSKR 60

Query: 61  KGFLSWDDYFMAIAFLSAERSKDPNRQVGACLVSQNGVILGIGYNGFPRGCSDDQLPWAK 120
           +GFLSWDDYFMAIAFLSAERSKDPNRQVGACLVSQNGVILGIGYNGFPRGCSDDQLPWAK
Sbjct: 61  EGFLSWDDYFMAIAFLSAERSKDPNRQVGACLVSQNGVILGIGYNGFPRGCSDDQLPWAK 120

Query: 121 KSKTNDPLETKYPYVCHAEVNAILNTNHASASG------------------QSGVSEVIY 180
           KSKTN+PLETKYPYVCHAEVNAILNTNHASASG                  QSGVSEVIY
Sbjct: 121 KSKTNNPLETKYPYVCHAEVNAILNTNHASASGQKLYVTMFPCNECAKIIIQSGVSEVIY 180

Query: 181 FVEKRINNSNIAYVASHKLLSMAGVKVRKHQPLSNQILIKFEDPRT 209
           FVEKRINNSN+AYVASHKLLSMAGVKVRKHQPLS+QILIKFEDP T
Sbjct: 181 FVEKRINNSNVAYVASHKLLSMAGVKVRKHQPLSDQILIKFEDPHT 226

[Close]

BLAST of HG10020967 vs. ExPASy TrEMBL
Match: A0A1S3AZF4 (deoxycytidylate deaminase isoform X1 OS=Cucumis melo OX=3656 GN=LOC103484432 PE=3 SV=1)

HSP 1 Score: 389.4 bits (999), Expect = 9.3e-105
Identity = 196/226 (86.73%), Postives = 201/226 (88.94%), Query Frame = 0


Query: 1   MNSRDLALVSTAAVLGAFTSALASRFFFNHKRHRPGFDLSRNGAFLNNGPSQCPFDPSKR 60
           MNSRDLALVSTAAVLGAFTSALA RFFFN K+HR  FDLSRNGA LNNG SQCPFDPSKR
Sbjct: 1   MNSRDLALVSTAAVLGAFTSALACRFFFNPKKHRSRFDLSRNGALLNNGSSQCPFDPSKR 60

Query: 61  KGFLSWDDYFMAIAFLSAERSKDPNRQVGACLVSQNGVILGIGYNGFPRGCSDDQLPWAK 120
           +GFLSWDDYFMAIAFLSAERSKDPNRQVGACLVSQNGVILGIGYNGFPRGCSDDQLPWAK
Sbjct: 61  EGFLSWDDYFMAIAFLSAERSKDPNRQVGACLVSQNGVILGIGYNGFPRGCSDDQLPWAK 120

Query: 121 KSKTNDPLETKYPYVCHAEVNAILNTNHASASG------------------QSGVSEVIY 180
           KSKTN+PLETKYPYVCHAEVNAILNTNHASASG                  QSGVSEVIY
Sbjct: 121 KSKTNNPLETKYPYVCHAEVNAILNTNHASASGQKLYVTMFPCNECAKIIIQSGVSEVIY 180

Query: 181 FVEKRINNSNIAYVASHKLLSMAGVKVRKHQPLSNQILIKFEDPRT 209
           FVEKRINNSN+AYVASHKLLSMAGVKVRKHQPLS+QILIKFEDP T
Sbjct: 181 FVEKRINNSNVAYVASHKLLSMAGVKVRKHQPLSDQILIKFEDPHT 226

[Close]

BLAST of HG10020967 vs. ExPASy TrEMBL
Match: A0A0A0LWP2 (CMP/dCMP-type deaminase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G050500 PE=3 SV=1)

HSP 1 Score: 379.8 bits (974), Expect = 7.3e-102
Identity = 191/226 (84.51%), Postives = 199/226 (88.05%), Query Frame = 0


Query: 1   MNSRDLALVSTAAVLGAFTSALASRFFFNHKRHRPGFDLSRNGAFLNNGPSQCPFDPSKR 60
           MNSRDLALVSTAAVL AFTSA+A RFFF+ K+HR  FDLSRNGA LNNG S+CPFDPSKR
Sbjct: 1   MNSRDLALVSTAAVLSAFTSAIACRFFFSPKKHRSRFDLSRNGALLNNGSSRCPFDPSKR 60

Query: 61  KGFLSWDDYFMAIAFLSAERSKDPNRQVGACLVSQNGVILGIGYNGFPRGCSDDQLPWAK 120
           +GFLSWDDYFMAIAFLSAERSKDPNRQVGACLVSQNGVILGIGYNGFPRGCSDDQLPWAK
Sbjct: 61  EGFLSWDDYFMAIAFLSAERSKDPNRQVGACLVSQNGVILGIGYNGFPRGCSDDQLPWAK 120

Query: 121 KSKTNDPLETKYPYVCHAEVNAILNTNHASASG------------------QSGVSEVIY 180
           KSKTN+PLETKYPYVCHAEVNAILNTNHASASG                  QSGVSEVIY
Sbjct: 121 KSKTNNPLETKYPYVCHAEVNAILNTNHASASGQKLYVTMFPCNECAKIIIQSGVSEVIY 180

Query: 181 FVEKRINNSNIAYVASHKLLSMAGVKVRKHQPLSNQILIKFEDPRT 209
           FVEKRINNSN+AY ASHKLLSMAGVKVRKHQPLS+QILIKFEDP T
Sbjct: 181 FVEKRINNSNVAYFASHKLLSMAGVKVRKHQPLSDQILIKFEDPCT 226

[Close]

BLAST of HG10020967 vs. ExPASy TrEMBL
Match: A0A6J1C676 (deoxycytidylate deaminase isoform X1 OS=Momordica charantia OX=3673 GN=LOC111008774 PE=3 SV=1)

HSP 1 Score: 362.1 bits (928), Expect = 1.6e-96
Identity = 180/226 (79.65%), Postives = 192/226 (84.96%), Query Frame = 0


Query: 1   MNSRDLALVSTAAVLGAFTSALASRFFFNHKRHRPGFDLSRNGAFLNNGPSQCPFDPSKR 60
           MNSR+L+LVSTA V G   SA+A RFFFN K+HRP FDL  N A  N  PSQCPFDPSKR
Sbjct: 1   MNSRELSLVSTATVFGVLASAVAFRFFFNPKKHRPRFDLPGNDALSNKAPSQCPFDPSKR 60

Query: 61  KGFLSWDDYFMAIAFLSAERSKDPNRQVGACLVSQNGVILGIGYNGFPRGCSDDQLPWAK 120
           +G+LSWDDYFMAIAFLSAERSKDPNRQVGACLVSQNGVILGIGYNGFPRGC DDQLPWAK
Sbjct: 61  QGYLSWDDYFMAIAFLSAERSKDPNRQVGACLVSQNGVILGIGYNGFPRGCPDDQLPWAK 120

Query: 121 KSKTNDPLETKYPYVCHAEVNAILNTNHASASG------------------QSGVSEVIY 180
           KSKT++PLETKYPYVCHAEVNAILNTNHASASG                  QSGVSEVIY
Sbjct: 121 KSKTSNPLETKYPYVCHAEVNAILNTNHASASGQKLYVTMFPCNECAKIIIQSGVSEVIY 180

Query: 181 FVEKRINNSNIAYVASHKLLSMAGVKVRKHQPLSNQILIKFEDPRT 209
           F+EKRINNS++AYVASHKLLSMAGVKVRKHQPLS+QILIKFEDPRT
Sbjct: 181 FLEKRINNSDVAYVASHKLLSMAGVKVRKHQPLSDQILIKFEDPRT 226

[Close]

BLAST of HG10020967 vs. ExPASy TrEMBL
Match: A0A6J1GTC6 (deoxycytidylate deaminase isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111457251 PE=3 SV=1)

HSP 1 Score: 362.1 bits (928), Expect = 1.6e-96
Identity = 182/226 (80.53%), Postives = 195/226 (86.28%), Query Frame = 0


Query: 1   MNSRDLALVSTAAVLGAFTSALASRFFFNHKRHRPGFDLSRNGAFLNNGPSQCPFDPSKR 60
           MNSR+LALVSTAAV+GA  SA+A RFFFN K+HRP FDLSRN A LNNG SQCPFDPSKR
Sbjct: 1   MNSRELALVSTAAVVGAVASAIACRFFFNPKKHRPQFDLSRNDAPLNNGHSQCPFDPSKR 60

Query: 61  KGFLSWDDYFMAIAFLSAERSKDPNRQVGACLVSQNGVILGIGYNGFPRGCSDDQLPWAK 120
            G+LSWDDYFMAIAFLSAERSKDPNRQVGACLVSQNGVILGIGYNGFPRGC DD+LPWAK
Sbjct: 61  NGYLSWDDYFMAIAFLSAERSKDPNRQVGACLVSQNGVILGIGYNGFPRGCPDDKLPWAK 120

Query: 121 KSKTNDPLETKYPYVCHAEVNAILNTNHASASG------------------QSGVSEVIY 180
           KSKT++PLETKYPYVCHAEVNAILNTNHASASG                  QSGVSEVIY
Sbjct: 121 KSKTSNPLETKYPYVCHAEVNAILNTNHASASGQRLYVTMFPCNECAKVIIQSGVSEVIY 180

Query: 181 FVEKRINNSNIAYVASHKLLSMAGVKVRKHQPLSNQILIKFEDPRT 209
           F+EKR+NNS +AY+ASHKLLSMAGVKVRKHQP SNQILIKFE+P T
Sbjct: 181 FIEKRMNNS-VAYIASHKLLSMAGVKVRKHQPWSNQILIKFEEPHT 225

[Close]

BLAST of HG10020967 vs. TAIR 10
Match: AT3G48540.1 (Cytidine/deoxycytidylate deaminase family protein )

HSP 1 Score: 302.0 bits (772), Expect = 3.7e-82
Identity = 156/225 (69.33%), Postives = 175/225 (77.78%), Query Frame = 0


Query: 1   MNSRDLALVSTAAVLGAFTSALASRFFFNHKRHRPG--FDLSRNGAFLNNGPSQCPFDPS 60
           MNSRDL LVST+A+ GA  SALA RFF ++ ++     F  +   A     P+  PF P 
Sbjct: 1   MNSRDLTLVSTSAIFGALISALAFRFFSSNPKNPKSRKFTSTEISAISRKFPALDPFSPL 60

Query: 61  KRKGFLSWDDYFMAIAFLSAERSKDPNRQVGACLVSQNGVILGIGYNGFPRGCSDDQLPW 120
           KR G+LSWDDYFMAIAFLSAERSKDPNRQVGACLVSQNGVILGIGYNGFPRGCSDD+LPW
Sbjct: 61  KRNGYLSWDDYFMAIAFLSAERSKDPNRQVGACLVSQNGVILGIGYNGFPRGCSDDKLPW 120

Query: 121 AKKSKTNDPLETKYPYVCHAEVNAILNTNHASASG------------------QSGVSEV 180
           AKKS+T DPLETKYPYVCHAEVNAILNTNHASA+G                  QSGV+EV
Sbjct: 121 AKKSRTGDPLETKYPYVCHAEVNAILNTNHASAAGQKLYVTMFPCNECAKIILQSGVAEV 180

Query: 181 IYFVEKRINNSNIAYVASHKLLSMAGVKVRKHQPLSNQILIKFED 206
           IYFVEKR N+S++AYVASHKLLSMA VKVRKHQP  ++ILIKFE+
Sbjct: 181 IYFVEKRPNDSDVAYVASHKLLSMANVKVRKHQPEMDEILIKFEE 225

The following BLAST results are available for this feature:

BLAST of HG10020967 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038895029.1	5.4e-107	88.50	deoxycytidylate deaminase [Benincasa hispida]	[more]
XP_008439719.1	1.9e-104	86.73	PREDICTED: deoxycytidylate deaminase isoform X1 [Cucumis melo] >KAA0055333.1 deo...	[more]
XP_004145155.1	1.5e-101	84.51	deoxycytidylate deaminase [Cucumis sativus] >KGN64411.1 hypothetical protein Csa...	[more]
XP_022955223.1	3.3e-96	80.53	deoxycytidylate deaminase isoform X1 [Cucurbita moschata]	[more]
XP_022137275.1	3.3e-96	79.65	deoxycytidylate deaminase isoform X1 [Momordica charantia]	[more]

BLAST of HG10020967 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q5RC69	2.3e-36	48.78	Deoxycytidylate deaminase OS=Pongo abelii OX=9601 GN=DCTD PE=2 SV=1	[more]
P32321	3.3e-35	47.56	Deoxycytidylate deaminase OS=Homo sapiens OX=9606 GN=DCTD PE=1 SV=2	[more]
Q8K2D6	1.3e-34	45.73	Deoxycytidylate deaminase OS=Mus musculus OX=10090 GN=Dctd PE=2 SV=1	[more]
Q5M9G0	1.3e-34	45.73	Deoxycytidylate deaminase OS=Rattus norvegicus OX=10116 GN=Dctd PE=2 SV=1	[more]
Q9VWA2	2.4e-33	46.71	Probable deoxycytidylate deaminase OS=Drosophila melanogaster OX=7227 GN=CG6951 ...	[more]

BLAST of HG10020967 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UHA6	9.3e-105	86.73	Deoxycytidylate deaminase isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]
A0A1S3AZF4	9.3e-105	86.73	deoxycytidylate deaminase isoform X1 OS=Cucumis melo OX=3656 GN=LOC103484432 PE=...	[more]
A0A0A0LWP2	7.3e-102	84.51	CMP/dCMP-type deaminase domain-containing protein OS=Cucumis sativus OX=3659 GN=...	[more]
A0A6J1C676	1.6e-96	79.65	deoxycytidylate deaminase isoform X1 OS=Momordica charantia OX=3673 GN=LOC111008...	[more]
A0A6J1GTC6	1.6e-96	80.53	deoxycytidylate deaminase isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC1114572...	[more]

BLAST of HG10020967 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G48540.1	3.7e-82	69.33	Cytidine/deoxycytidylate deaminase family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002125	Cytidine and deoxycytidylate deaminase domain	PFAM	PF00383	dCMP_cyt_deam_1	coord: 65..149 e-value: 4.0E-13 score: 49.1
IPR002125	Cytidine and deoxycytidylate deaminase domain	PROSITE	PS51747	CYT_DCMP_DEAMINASES_2	coord: 65..208 score: 14.19273
None	No IPR available	GENE3D	3.40.140.10	Cytidine Deaminase, domain 2	coord: 57..208 e-value: 1.3E-41 score: 144.0
None	No IPR available	PIRSR	PIRSR006019-1	PIRSR006019-1	coord: 59..152 e-value: 6.6E-29 score: 98.3
None	No IPR available	PIRSR	PIRSR006019-2	PIRSR006019-2	coord: 59..152 e-value: 6.6E-29 score: 98.3
None	No IPR available	PANTHER	PTHR11086:SF21	CYTIDINE/DEOXYCYTIDYLATE DEAMINASE FAMILY PROTEIN	coord: 1..154 coord: 154..205
IPR015517	Deoxycytidylate deaminase-related	PANTHER	PTHR11086	DEOXYCYTIDYLATE DEAMINASE-RELATED	coord: 154..205
IPR015517	Deoxycytidylate deaminase-related	PANTHER	PTHR11086	DEOXYCYTIDYLATE DEAMINASE-RELATED	coord: 1..154
IPR016193	Cytidine deaminase-like	SUPERFAMILY	53927	Cytidine deaminase-like	coord: 67..197

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10020967.1	HG10020967.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0071704	organic substance metabolic process
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0016787	hydrolase activity
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0003824	catalytic activity