HG10020962 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10020962
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	CHANNEL_COLICIN domain-containing protein
Location	Chr05: 4033086 .. 4035158 (-)
RNA-Seq Expression	HG10020962
Synteny	HG10020962

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCGAATCCAGTGGAACAAACCCAGCAAGCAGAAGGCCCTAAGCCATCTGATGTAAACCCTAGCGACCAAGGCGATCAATCCCAAGAATGGGAAATCATGGCGCGAGCTTGGCTTTGCTCCTTCCCCGAGGCCAAAGCTGGGTCCATGGAAGAGGTTGAAGCTTGGATTGACTCCAATCATGGCTCTTTACCAGGAAACCTCAAATCAATGCCCCGCTCCGACCTTTGCCAGAGGCTGATTTCTATCCAAAATTTAATGAGACTTTCCACTCAGGCTACGGTACTTTACATTACTTGCTTTCTATTGCATTTATTATTGAAATATGTTGTTGTAGTCTTTTATATCAGATCTTAGCCTCTTCATCGTGTTTAGAATTGTGGATTTTAGAGGGAGAATGAGAATGTTTATGATGTAGAGCTTGAATTGTTATGGCTTTTGTTTCAGAGGTAGTTTGTCATGCACTGCTCTATGTGGTTTAAGAGTTTTTACTATCTAAGTCCTTCTGTTGATGGATAAATAACTTCTAGATTCAGGTTATTGATTAGGTTTAGACTTGAGAAGTAGAATGTAGTTTGATGAAACTCTTATGCTTTCAGTGGCTAAACTGTTAAGGCACTGCAGTGTTTTTTCCTTCCATTGTTCTCCCTTAGCCATTCAATCTGTGATTGGTACATTTTCTTGTTTATGAACCCTAAATAAAACTTATGATTTGAAATATATATGTTCCATTACAGGGAAAGGAAGAGATTCAGGGTGATCGAGGCGATCAGGGGGATCAGGGAGATCTTCCACATGCTCGATTTCAACGCACCGACCAGTGGTTACCAGTTTATTCTTGGTTAGAGTCTCTACATCACGATGAGGTTGTCAAGTCTAAGGAAATATCTGATTGGTTAACTGAAAATCCCACCATCAGAGATCAGCTGTGTTCAAGACATTCTCGTTATCATTTGATGCACTATATCAAAAAGTGCCATTTGAAGATATTGAAAAGAAAGGAAAAGAAAAAGGTATCTAAACGAATTTCTTTTGTCATATGAACTGTTGAGGATTCACTTCCCTGATTGAAGGTTGTTTCGATTGACTTTCTAACTGCTTAAAAACATATTTACACTTAGAAAGTCAATTCACGCGTATTAAGTACTTAGAAAGTCAATCTAAACAGGTCTTGAGTCGGCTAAAGTACTGCCTGAATTCCATGTCTGCTAGTTAAAAGATTCTACTGATGATACTGTCCTGTGTTCTTAAGTTCCACAAAATCTCATTGACATTTTGTTTGCCAGTATCTTATTACCTCATCTGACCCAGCATTTGTGAAGAAATATCATATAAAAACTGATGAATTCGACTCTCGTGGTTTTACTCTAATGAAATTTTATTGTTTCTTGGGCAGGGTTCTCAGCTGCCTGACAAATCTCCTTTAAAAGTTCACAAGGATGTTTCTATGAAACCAGCACTGCCTCCACGTAAATTTTTTTCTGCATACTATATTTTTCTTAAAAGACTTCTTATCATCTCACCTTTCTTGTAAGTTTACTTAAAGTTATATTCAAATTCAGTTTCTAAATGCAGGAACCCAAGGTTTCTTATTAAGAATACAAATAGAAAATGGTCTTTGCCTTCACAACTTAGACCACGCTTATCCGTACTTGAATTTTACTTTTGTTATTGCAGGTGATTCGTTTAGCGATCTACCGAAAGACAGTGACATATATTTGGCAAAACGAAAGGAAGCCTTCCGAAAATATGAAATGTAAGTTTATAATGTGACTTTTTTGTTTCTTTTTTGGTTAAATTACGCATTGCTTTCAAAGAAATGAGGTGATTTGTTTATAATTTTGTTGAATCTTGCAGTTTAGTGGAGTTGGAGAAGTTGCTTGCCCCCAACTTTTCCAAGTCTCAAGGGGTCAAATAATTGGAGAAACTTTGGGGACTGCCATCACTCTTGAGTATGGGATATGGGTCCAATTCCAAGTTTGTAGTCATTGCCAGGTTTTTACCTTGTTCATTGCTGAATATTGTGGCCCCATTGCCCTGCTTTCTCACACCAGAATAGAGTACCAGATCTGA

mRNA sequence

ATGTCGAATCCAGTGGAACAAACCCAGCAAGCAGAAGGCCCTAAGCCATCTGATGTAAACCCTAGCGACCAAGGCGATCAATCCCAAGAATGGGAAATCATGGCGCGAGCTTGGCTTTGCTCCTTCCCCGAGGCCAAAGCTGGGTCCATGGAAGAGGTTGAAGCTTGGATTGACTCCAATCATGGCTCTTTACCAGGAAACCTCAAATCAATGCCCCGCTCCGACCTTTGCCAGAGGCTGATTTCTATCCAAAATTTAATGAGACTTTCCACTCAGGCTACGGGAAAGGAAGAGATTCAGGGTGATCGAGGCGATCAGGGGGATCAGGGAGATCTTCCACATGCTCGATTTCAACGCACCGACCAGTGGTTACCAGTTTATTCTTGGTTAGAGTCTCTACATCACGATGAGGTTGTCAAGTCTAAGGAAATATCTGATTGGTTAACTGAAAATCCCACCATCAGAGATCAGCTGTGTTCAAGACATTCTCGTTATCATTTGATGCACTATATCAAAAAGTGCCATTTGAAGATATTGAAAAGAAAGGAAAAGAAAAAGGGTTCTCAGCTGCCTGACAAATCTCCTTTAAAAGTTCACAAGGATGTTTCTATGAAACCAGCACTGCCTCCACGTGATTCGTTTAGCGATCTACCGAAAGACAGTGACATATATTTGGCAAAACGAAAGGAAGCCTTCCGAAAATATGAAATTGGAGTTGGAGAAGTTGCTTGCCCCCAACTTTTCCAAGTCTCAAGGGGTCAAATAATTGGAGAAACTTTGGGGACTGCCATCACTCTTGAGTATGGGATATGGGTCCAATTCCAAGTTTGTAGTCATTGCCAGGTTTTTACCTTGTTCATTGCTGAATATTGTGGCCCCATTGCCCTGCTTTCTCACACCAGAATAGAGTACCAGATCTGA

Coding sequence (CDS)

ATGTCGAATCCAGTGGAACAAACCCAGCAAGCAGAAGGCCCTAAGCCATCTGATGTAAACCCTAGCGACCAAGGCGATCAATCCCAAGAATGGGAAATCATGGCGCGAGCTTGGCTTTGCTCCTTCCCCGAGGCCAAAGCTGGGTCCATGGAAGAGGTTGAAGCTTGGATTGACTCCAATCATGGCTCTTTACCAGGAAACCTCAAATCAATGCCCCGCTCCGACCTTTGCCAGAGGCTGATTTCTATCCAAAATTTAATGAGACTTTCCACTCAGGCTACGGGAAAGGAAGAGATTCAGGGTGATCGAGGCGATCAGGGGGATCAGGGAGATCTTCCACATGCTCGATTTCAACGCACCGACCAGTGGTTACCAGTTTATTCTTGGTTAGAGTCTCTACATCACGATGAGGTTGTCAAGTCTAAGGAAATATCTGATTGGTTAACTGAAAATCCCACCATCAGAGATCAGCTGTGTTCAAGACATTCTCGTTATCATTTGATGCACTATATCAAAAAGTGCCATTTGAAGATATTGAAAAGAAAGGAAAAGAAAAAGGGTTCTCAGCTGCCTGACAAATCTCCTTTAAAAGTTCACAAGGATGTTTCTATGAAACCAGCACTGCCTCCACGTGATTCGTTTAGCGATCTACCGAAAGACAGTGACATATATTTGGCAAAACGAAAGGAAGCCTTCCGAAAATATGAAATTGGAGTTGGAGAAGTTGCTTGCCCCCAACTTTTCCAAGTCTCAAGGGGTCAAATAATTGGAGAAACTTTGGGGACTGCCATCACTCTTGAGTATGGGATATGGGTCCAATTCCAAGTTTGTAGTCATTGCCAGGTTTTTACCTTGTTCATTGCTGAATATTGTGGCCCCATTGCCCTGCTTTCTCACACCAGAATAGAGTACCAGATCTGA

Protein sequence

MSNPVEQTQQAEGPKPSDVNPSDQGDQSQEWEIMARAWLCSFPEAKAGSMEEVEAWIDSNHGSLPGNLKSMPRSDLCQRLISIQNLMRLSTQATGKEEIQGDRGDQGDQGDLPHARFQRTDQWLPVYSWLESLHHDEVVKSKEISDWLTENPTIRDQLCSRHSRYHLMHYIKKCHLKILKRKEKKKGSQLPDKSPLKVHKDVSMKPALPPRDSFSDLPKDSDIYLAKRKEAFRKYEIGVGEVACPQLFQVSRGQIIGETLGTAITLEYGIWVQFQVCSHCQVFTLFIAEYCGPIALLSHTRIEYQI

Homology

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BLAST of HG10020962 vs. NCBI nr
Match: XP_038893664.1 (uncharacterized protein LOC120082533 [Benincasa hispida] >XP_038893665.1 uncharacterized protein LOC120082533 [Benincasa hispida])

HSP 1 Score: 445.3 bits (1144), Expect = 4.3e-121
Identity = 221/239 (92.47%), Postives = 227/239 (94.98%), Query Frame = 0


Query: 1   MSNPVEQTQQAEGPKPSDVNPSDQGDQSQEWEIMARAWLCSFPEAKAGSMEEVEAWIDSN 60
           MSNPVEQTQ+ E PKPS+VNPSDQGDQSQEWEIMARAWLCSFPEAKAGSMEEVEAWIDSN
Sbjct: 1   MSNPVEQTQEGEDPKPSEVNPSDQGDQSQEWEIMARAWLCSFPEAKAGSMEEVEAWIDSN 60

Query: 61  HGSLPGNLKSMPRSDLCQRLISIQNLMRLSTQATGKEEI--QGDRGDQGDQGDLPHARFQ 120
           H SLPGNLKSMPRSDLCQRLISIQNLMRLS+QATGKEEI  Q D  DQG QGDLPHARFQ
Sbjct: 61  HASLPGNLKSMPRSDLCQRLISIQNLMRLSSQATGKEEIHKQQDEDDQGYQGDLPHARFQ 120

Query: 121 RTDQWLPVYSWLESLHHDEVVKSKEISDWLTENPTIRDQLCSRHSRYHLMHYIKKCHLKI 180
           RT+QW+PVYSWLESLH DEVVKSKEISDWLTENPTIRDQLCSRHSRYHLMHYIKKCHLKI
Sbjct: 121 RTNQWIPVYSWLESLHQDEVVKSKEISDWLTENPTIRDQLCSRHSRYHLMHYIKKCHLKI 180

Query: 181 LKRKEKKKGSQLPDKSPLKVHKDVSMKPALPPRDSFSDLPKDSDIYLAKRKEAFRKYEI 238
           LKRKEKKKGSQLPDKSPLKVHKDV MKPALPPRDSFSDLPKDS IYLAKRKEA+RKYEI
Sbjct: 181 LKRKEKKKGSQLPDKSPLKVHKDVLMKPALPPRDSFSDLPKDSGIYLAKRKEAYRKYEI 239

[Close]

BLAST of HG10020962 vs. NCBI nr
Match: XP_016901626.1 (PREDICTED: uncharacterized protein LOC107991313 [Cucumis melo] >KAA0055329.1 uncharacterized protein E6C27_scaffold80G001730 [Cucumis melo var. makuwa] >TYJ99254.1 uncharacterized protein E5676_scaffold248G004660 [Cucumis melo var. makuwa])

HSP 1 Score: 433.3 bits (1113), Expect = 1.7e-117
Identity = 220/245 (89.80%), Postives = 225/245 (91.84%), Query Frame = 0


Query: 1   MSNPVEQTQ------QAEGPKPSDVNPSDQGDQSQEWEIMARAWLCSFPEAKAGSMEEVE 60
           MSNPVE+T+      + E PKPSDVNPSD GDQSQEWEIMARAWLCSFPEAKAGSMEEVE
Sbjct: 1   MSNPVERTREGEEEGEGEDPKPSDVNPSDHGDQSQEWEIMARAWLCSFPEAKAGSMEEVE 60

Query: 61  AWIDSNHGSLPGNLKSMPRSDLCQRLISIQNLMRLSTQATGKEEI--QGDRGDQGDQGDL 120
           AWIDSNH SLPGNLKSMPRSDLCQRLISIQNLMRLSTQ  GKE+I  Q D  DQGDQGDL
Sbjct: 61  AWIDSNHASLPGNLKSMPRSDLCQRLISIQNLMRLSTQ--GKEDIHKQQDEADQGDQGDL 120

Query: 121 PHARFQRTDQWLPVYSWLESLHHDEVVKSKEISDWLTENPTIRDQLCSRHSRYHLMHYIK 180
           PHARFQRTDQW+PVYSWLESL  DEVVKSKEISDWLTENPTIRDQLCSRHSRYHLMHYIK
Sbjct: 121 PHARFQRTDQWIPVYSWLESLQQDEVVKSKEISDWLTENPTIRDQLCSRHSRYHLMHYIK 180

Query: 181 KCHLKILKRKEKKKGSQLPDKSPLKVHKDVSMKPALPPRDSFSDLPKDSDIYLAKRKEAF 238
           KCHLKILKRKEKKKGSQLPDKSPLKVHKDV MKPALPPRDSFSDLPKDSDIYLAKRKEAF
Sbjct: 181 KCHLKILKRKEKKKGSQLPDKSPLKVHKDVFMKPALPPRDSFSDLPKDSDIYLAKRKEAF 240

[Close]

BLAST of HG10020962 vs. NCBI nr
Match: XP_004152526.1 (uncharacterized protein LOC101216205 [Cucumis sativus] >KGN64407.1 hypothetical protein Csa_013106 [Cucumis sativus])

HSP 1 Score: 428.3 bits (1100), Expect = 5.5e-116
Identity = 216/241 (89.63%), Postives = 223/241 (92.53%), Query Frame = 0


Query: 1   MSNPVEQT----QQAEGPKPSDVNPSDQGDQSQEWEIMARAWLCSFPEAKAGSMEEVEAW 60
           MSNPVEQT    ++ E PKPSDVNP+D GDQSQEWEIMARAWLCSFPEAKAGSMEEVEAW
Sbjct: 1   MSNPVEQTREGGEEEEDPKPSDVNPNDHGDQSQEWEIMARAWLCSFPEAKAGSMEEVEAW 60

Query: 61  IDSNHGSLPGNLKSMPRSDLCQRLISIQNLMRLSTQATGKEEIQGDRGDQGDQGDLPHAR 120
           IDSNH SLPGNLKSMPRSDLCQRLISIQNLMRLSTQ  GKE+I   + D+GDQGDLPHAR
Sbjct: 61  IDSNHASLPGNLKSMPRSDLCQRLISIQNLMRLSTQ--GKEDIHKQQ-DEGDQGDLPHAR 120

Query: 121 FQRTDQWLPVYSWLESLHHDEVVKSKEISDWLTENPTIRDQLCSRHSRYHLMHYIKKCHL 180
           FQRTDQW+PVYSWLESL  DEVVKSKEISDWLTENPTIRDQLCSRHSRYHLMHYIKKCHL
Sbjct: 121 FQRTDQWIPVYSWLESLQQDEVVKSKEISDWLTENPTIRDQLCSRHSRYHLMHYIKKCHL 180

Query: 181 KILKRKEKKKGSQLPDKSPLKVHKDVSMKPALPPRDSFSDLPKDSDIYLAKRKEAFRKYE 238
           KILKRKEKKKGSQLPDKSPLKVHKDV MKPALPPRDSFSDLPKDSDIYL KRKEAFRKYE
Sbjct: 181 KILKRKEKKKGSQLPDKSPLKVHKDVFMKPALPPRDSFSDLPKDSDIYLTKRKEAFRKYE 238

[Close]

BLAST of HG10020962 vs. NCBI nr
Match: XP_022137036.1 (uncharacterized protein LOC111008597 isoform X1 [Momordica charantia])

HSP 1 Score: 426.4 bits (1095), Expect = 2.1e-115
Identity = 212/237 (89.45%), Postives = 221/237 (93.25%), Query Frame = 0


Query: 1   MSNPVEQTQQAEGPKPSDVNPSDQGDQSQEWEIMARAWLCSFPEAKAGSMEEVEAWIDSN 60
           MSNP E+T Q E PKPSD+NPSDQ D SQEWE MARAWLCSFPEA+AGSMEEVEAWIDSN
Sbjct: 1   MSNPAEET-QGEQPKPSDLNPSDQSDHSQEWETMARAWLCSFPEARAGSMEEVEAWIDSN 60

Query: 61  HGSLPGNLKSMPRSDLCQRLISIQNLMRLSTQATGKEEIQGDRGDQGDQGDLPHARFQRT 120
           H SLPGNLKSMPRSDLCQRLISIQNLMRLS Q  GKEEIQ   GDQGDQGDLPHARFQRT
Sbjct: 61  HASLPGNLKSMPRSDLCQRLISIQNLMRLSNQ--GKEEIQ---GDQGDQGDLPHARFQRT 120

Query: 121 DQWLPVYSWLESLHHDEVVKSKEISDWLTENPTIRDQLCSRHSRYHLMHYIKKCHLKILK 180
           DQW+PVYSWLESL H+EVVKSK+ISDWLTENP+IRDQLCSRHSRYHLMHYIKKCHLKILK
Sbjct: 121 DQWIPVYSWLESLQHEEVVKSKDISDWLTENPSIRDQLCSRHSRYHLMHYIKKCHLKILK 180

Query: 181 RKEKKKGSQLPDKSPLKVHKDVSMKPALPPRDSFSDLPKDSDIYLAKRKEAFRKYEI 238
           RKEKKKGSQ+PDKSPLKVHKDV MKPALPPRDSFSDLPKDSD+YLAKRKEAFRKYEI
Sbjct: 181 RKEKKKGSQMPDKSPLKVHKDVLMKPALPPRDSFSDLPKDSDVYLAKRKEAFRKYEI 231

[Close]

BLAST of HG10020962 vs. NCBI nr
Match: XP_023542742.1 (uncharacterized protein LOC111802563 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 422.2 bits (1084), Expect = 3.9e-114
Identity = 214/247 (86.64%), Postives = 221/247 (89.47%), Query Frame = 0


Query: 1   MSNPVEQTQQAEGPKPSDVNPSDQGDQSQEWEIMARAWLCSFPEAKAGSMEEVEAWIDSN 60
           MSNP EQ Q+   PKPSD+NPSDQ D SQEWE+MARAWL SFPEAKAGSMEEVEAWIDSN
Sbjct: 1   MSNPAEQIQEGAEPKPSDLNPSDQSDHSQEWEVMARAWLSSFPEAKAGSMEEVEAWIDSN 60

Query: 61  HGSLPGNLKSMPRSDLCQRLISIQNLMRLSTQATGKEEIQG------DRGDQGDQGDLPH 120
           H SLPGNLKSMPRSDLCQRLISIQNLMRLS Q  GKEEIQG      DR DQGDQGDLPH
Sbjct: 61  HASLPGNLKSMPRSDLCQRLISIQNLMRLSAQ--GKEEIQGDQVDRADRADQGDQGDLPH 120

Query: 121 ARFQRTDQWLPVYSWLESLHHDEVVKSKEISDWLTENPTIRDQLCSRHSRYHLMHYIKKC 180
           ARFQRTDQW+PVYSWLESL  DEVVKSKEISDWLTENP+IRDQLCSRHSRYHLMHYIKKC
Sbjct: 121 ARFQRTDQWIPVYSWLESLQQDEVVKSKEISDWLTENPSIRDQLCSRHSRYHLMHYIKKC 180

Query: 181 HLKILKRKEKKKGSQLPD----KSPLKVHKDVSMKPALPPRDSFSDLPKDSDIYLAKRKE 238
           HLKILKRKEKKKGSQLP+    KSPLKVHKDV MKPALPPRDSFSDLPKDSD+YLAKRKE
Sbjct: 181 HLKILKRKEKKKGSQLPEKSPQKSPLKVHKDVVMKPALPPRDSFSDLPKDSDVYLAKRKE 240

[Close]

BLAST of HG10020962 vs. ExPASy TrEMBL
Match: A0A5D3BJS0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G004660 PE=4 SV=1)

HSP 1 Score: 433.3 bits (1113), Expect = 8.2e-118
Identity = 220/245 (89.80%), Postives = 225/245 (91.84%), Query Frame = 0


Query: 1   MSNPVEQTQ------QAEGPKPSDVNPSDQGDQSQEWEIMARAWLCSFPEAKAGSMEEVE 60
           MSNPVE+T+      + E PKPSDVNPSD GDQSQEWEIMARAWLCSFPEAKAGSMEEVE
Sbjct: 1   MSNPVERTREGEEEGEGEDPKPSDVNPSDHGDQSQEWEIMARAWLCSFPEAKAGSMEEVE 60

Query: 61  AWIDSNHGSLPGNLKSMPRSDLCQRLISIQNLMRLSTQATGKEEI--QGDRGDQGDQGDL 120
           AWIDSNH SLPGNLKSMPRSDLCQRLISIQNLMRLSTQ  GKE+I  Q D  DQGDQGDL
Sbjct: 61  AWIDSNHASLPGNLKSMPRSDLCQRLISIQNLMRLSTQ--GKEDIHKQQDEADQGDQGDL 120

Query: 121 PHARFQRTDQWLPVYSWLESLHHDEVVKSKEISDWLTENPTIRDQLCSRHSRYHLMHYIK 180
           PHARFQRTDQW+PVYSWLESL  DEVVKSKEISDWLTENPTIRDQLCSRHSRYHLMHYIK
Sbjct: 121 PHARFQRTDQWIPVYSWLESLQQDEVVKSKEISDWLTENPTIRDQLCSRHSRYHLMHYIK 180

Query: 181 KCHLKILKRKEKKKGSQLPDKSPLKVHKDVSMKPALPPRDSFSDLPKDSDIYLAKRKEAF 238
           KCHLKILKRKEKKKGSQLPDKSPLKVHKDV MKPALPPRDSFSDLPKDSDIYLAKRKEAF
Sbjct: 181 KCHLKILKRKEKKKGSQLPDKSPLKVHKDVFMKPALPPRDSFSDLPKDSDIYLAKRKEAF 240

[Close]

BLAST of HG10020962 vs. ExPASy TrEMBL
Match: A0A1S4E072 (uncharacterized protein LOC107991313 OS=Cucumis melo OX=3656 GN=LOC107991313 PE=4 SV=1)

HSP 1 Score: 433.3 bits (1113), Expect = 8.2e-118
Identity = 220/245 (89.80%), Postives = 225/245 (91.84%), Query Frame = 0


Query: 1   MSNPVEQTQ------QAEGPKPSDVNPSDQGDQSQEWEIMARAWLCSFPEAKAGSMEEVE 60
           MSNPVE+T+      + E PKPSDVNPSD GDQSQEWEIMARAWLCSFPEAKAGSMEEVE
Sbjct: 1   MSNPVERTREGEEEGEGEDPKPSDVNPSDHGDQSQEWEIMARAWLCSFPEAKAGSMEEVE 60

Query: 61  AWIDSNHGSLPGNLKSMPRSDLCQRLISIQNLMRLSTQATGKEEI--QGDRGDQGDQGDL 120
           AWIDSNH SLPGNLKSMPRSDLCQRLISIQNLMRLSTQ  GKE+I  Q D  DQGDQGDL
Sbjct: 61  AWIDSNHASLPGNLKSMPRSDLCQRLISIQNLMRLSTQ--GKEDIHKQQDEADQGDQGDL 120

Query: 121 PHARFQRTDQWLPVYSWLESLHHDEVVKSKEISDWLTENPTIRDQLCSRHSRYHLMHYIK 180
           PHARFQRTDQW+PVYSWLESL  DEVVKSKEISDWLTENPTIRDQLCSRHSRYHLMHYIK
Sbjct: 121 PHARFQRTDQWIPVYSWLESLQQDEVVKSKEISDWLTENPTIRDQLCSRHSRYHLMHYIK 180

Query: 181 KCHLKILKRKEKKKGSQLPDKSPLKVHKDVSMKPALPPRDSFSDLPKDSDIYLAKRKEAF 238
           KCHLKILKRKEKKKGSQLPDKSPLKVHKDV MKPALPPRDSFSDLPKDSDIYLAKRKEAF
Sbjct: 181 KCHLKILKRKEKKKGSQLPDKSPLKVHKDVFMKPALPPRDSFSDLPKDSDIYLAKRKEAF 240

[Close]

BLAST of HG10020962 vs. ExPASy TrEMBL
Match: A0A0A0LUD5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G050460 PE=4 SV=1)

HSP 1 Score: 428.3 bits (1100), Expect = 2.6e-116
Identity = 216/241 (89.63%), Postives = 223/241 (92.53%), Query Frame = 0


Query: 1   MSNPVEQT----QQAEGPKPSDVNPSDQGDQSQEWEIMARAWLCSFPEAKAGSMEEVEAW 60
           MSNPVEQT    ++ E PKPSDVNP+D GDQSQEWEIMARAWLCSFPEAKAGSMEEVEAW
Sbjct: 1   MSNPVEQTREGGEEEEDPKPSDVNPNDHGDQSQEWEIMARAWLCSFPEAKAGSMEEVEAW 60

Query: 61  IDSNHGSLPGNLKSMPRSDLCQRLISIQNLMRLSTQATGKEEIQGDRGDQGDQGDLPHAR 120
           IDSNH SLPGNLKSMPRSDLCQRLISIQNLMRLSTQ  GKE+I   + D+GDQGDLPHAR
Sbjct: 61  IDSNHASLPGNLKSMPRSDLCQRLISIQNLMRLSTQ--GKEDIHKQQ-DEGDQGDLPHAR 120

Query: 121 FQRTDQWLPVYSWLESLHHDEVVKSKEISDWLTENPTIRDQLCSRHSRYHLMHYIKKCHL 180
           FQRTDQW+PVYSWLESL  DEVVKSKEISDWLTENPTIRDQLCSRHSRYHLMHYIKKCHL
Sbjct: 121 FQRTDQWIPVYSWLESLQQDEVVKSKEISDWLTENPTIRDQLCSRHSRYHLMHYIKKCHL 180

Query: 181 KILKRKEKKKGSQLPDKSPLKVHKDVSMKPALPPRDSFSDLPKDSDIYLAKRKEAFRKYE 238
           KILKRKEKKKGSQLPDKSPLKVHKDV MKPALPPRDSFSDLPKDSDIYL KRKEAFRKYE
Sbjct: 181 KILKRKEKKKGSQLPDKSPLKVHKDVFMKPALPPRDSFSDLPKDSDIYLTKRKEAFRKYE 238

[Close]

BLAST of HG10020962 vs. ExPASy TrEMBL
Match: A0A6J1C586 (uncharacterized protein LOC111008597 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111008597 PE=4 SV=1)

HSP 1 Score: 426.4 bits (1095), Expect = 1.0e-115
Identity = 212/237 (89.45%), Postives = 221/237 (93.25%), Query Frame = 0


Query: 1   MSNPVEQTQQAEGPKPSDVNPSDQGDQSQEWEIMARAWLCSFPEAKAGSMEEVEAWIDSN 60
           MSNP E+T Q E PKPSD+NPSDQ D SQEWE MARAWLCSFPEA+AGSMEEVEAWIDSN
Sbjct: 1   MSNPAEET-QGEQPKPSDLNPSDQSDHSQEWETMARAWLCSFPEARAGSMEEVEAWIDSN 60

Query: 61  HGSLPGNLKSMPRSDLCQRLISIQNLMRLSTQATGKEEIQGDRGDQGDQGDLPHARFQRT 120
           H SLPGNLKSMPRSDLCQRLISIQNLMRLS Q  GKEEIQ   GDQGDQGDLPHARFQRT
Sbjct: 61  HASLPGNLKSMPRSDLCQRLISIQNLMRLSNQ--GKEEIQ---GDQGDQGDLPHARFQRT 120

Query: 121 DQWLPVYSWLESLHHDEVVKSKEISDWLTENPTIRDQLCSRHSRYHLMHYIKKCHLKILK 180
           DQW+PVYSWLESL H+EVVKSK+ISDWLTENP+IRDQLCSRHSRYHLMHYIKKCHLKILK
Sbjct: 121 DQWIPVYSWLESLQHEEVVKSKDISDWLTENPSIRDQLCSRHSRYHLMHYIKKCHLKILK 180

Query: 181 RKEKKKGSQLPDKSPLKVHKDVSMKPALPPRDSFSDLPKDSDIYLAKRKEAFRKYEI 238
           RKEKKKGSQ+PDKSPLKVHKDV MKPALPPRDSFSDLPKDSD+YLAKRKEAFRKYEI
Sbjct: 181 RKEKKKGSQMPDKSPLKVHKDVLMKPALPPRDSFSDLPKDSDVYLAKRKEAFRKYEI 231

[Close]

BLAST of HG10020962 vs. ExPASy TrEMBL
Match: A0A6J1K2W0 (uncharacterized protein LOC111490167 OS=Cucurbita maxima OX=3661 GN=LOC111490167 PE=4 SV=1)

HSP 1 Score: 422.2 bits (1084), Expect = 1.9e-114
Identity = 214/247 (86.64%), Postives = 221/247 (89.47%), Query Frame = 0


Query: 1   MSNPVEQTQQAEGPKPSDVNPSDQGDQSQEWEIMARAWLCSFPEAKAGSMEEVEAWIDSN 60
           MSNP EQ Q+   PKPSD+NPSDQ D SQEWE+MARAWL SFPEAKAGSMEEVEAWIDSN
Sbjct: 1   MSNPAEQIQEGAEPKPSDLNPSDQSDHSQEWEVMARAWLSSFPEAKAGSMEEVEAWIDSN 60

Query: 61  HGSLPGNLKSMPRSDLCQRLISIQNLMRLSTQATGKEEIQG------DRGDQGDQGDLPH 120
           H SLPGNLKSMPRSDLCQRLISIQNLMRLS Q  GKEEIQG      DR DQGDQGDLPH
Sbjct: 61  HASLPGNLKSMPRSDLCQRLISIQNLMRLSAQ--GKEEIQGDQVDRADRADQGDQGDLPH 120

Query: 121 ARFQRTDQWLPVYSWLESLHHDEVVKSKEISDWLTENPTIRDQLCSRHSRYHLMHYIKKC 180
           ARFQRTDQW+PVYSWLESL  DEVVKSKEISDWLTENP+IRDQLCSRHSRYHLMHYIKKC
Sbjct: 121 ARFQRTDQWIPVYSWLESLQQDEVVKSKEISDWLTENPSIRDQLCSRHSRYHLMHYIKKC 180

Query: 181 HLKILKRKEKKKGSQLPD----KSPLKVHKDVSMKPALPPRDSFSDLPKDSDIYLAKRKE 238
           HLKILKRKEKKKGSQLP+    KSPLKVHKDV MKPALPPRDSFSDLPKDSD+YLAKRKE
Sbjct: 181 HLKILKRKEKKKGSQLPEKSPHKSPLKVHKDVVMKPALPPRDSFSDLPKDSDVYLAKRKE 240

[Close]

BLAST of HG10020962 vs. TAIR 10
Match: AT5G50410.1 (unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 219.2 bits (557), Expect = 4.7e-57
Identity = 123/236 (52.12%), Postives = 161/236 (68.22%), Query Frame = 0


Query: 5   VEQTQQAEGPKPSDVNPSDQGDQSQEWEIMARAWLCSFPEAKA-GSMEEVEAWIDSNHGS 64
           V+Q Q     K S+ N   + + SQEWE MARAW+ +FP+AKA  S  EVE WI +N  S
Sbjct: 14  VQQQQLESDDKISNTN--QRTEPSQEWETMARAWVSAFPDAKAVVSAGEVETWIGTNLDS 73

Query: 65  LPGNLKSMPRSDLCQRLISIQNLMRLSTQATGKEEIQGDRGDQGDQGDLPH-ARFQRTDQ 124
           LP +L+ MPRS++  RL+SIQ+ MR +  +        D+ +Q  + D  H ARFQRTDQ
Sbjct: 74  LPADLRHMPRSEIVDRLLSIQHYMRPTPSS--------DQNEQNVEADQQHPARFQRTDQ 133

Query: 125 WLPVYSWLESLHHDEVVKSKEISDWLTENPTIRDQLCSRHSRYHLMHYIKKCHLKILKRK 184
           WLPVYSWLESL + E+VKSK+IS+WL  NP ++ +L SRHSRYHL HY+KKCHLKILKRK
Sbjct: 134 WLPVYSWLESLDNGELVKSKDISEWLDANPEVKQELSSRHSRYHLTHYVKKCHLKILKRK 193

Query: 185 EKKKGSQLPDKSPLKVHKDVSMK-PALPPRDSFSDLPKDSDIYLAKRKEAFRKYEI 238
           EKK   +L   + ++VHK+   K  A    D  S++PKDSD+Y  K+KEA R++EI
Sbjct: 194 EKKGLIRLSRATAMEVHKEFGEKHHATLSADPMSNIPKDSDLYRTKQKEAKRRFEI 239

The following BLAST results are available for this feature:

BLAST of HG10020962 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038893664.1	4.3e-121	92.47	uncharacterized protein LOC120082533 [Benincasa hispida] >XP_038893665.1 unchara...	[more]
XP_016901626.1	1.7e-117	89.80	PREDICTED: uncharacterized protein LOC107991313 [Cucumis melo] >KAA0055329.1 unc...	[more]
XP_004152526.1	5.5e-116	89.63	uncharacterized protein LOC101216205 [Cucumis sativus] >KGN64407.1 hypothetical ...	[more]
XP_022137036.1	2.1e-115	89.45	uncharacterized protein LOC111008597 isoform X1 [Momordica charantia]	[more]
XP_023542742.1	3.9e-114	86.64	uncharacterized protein LOC111802563 [Cucurbita pepo subsp. pepo]	[more]

BLAST of HG10020962 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of HG10020962 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BJS0	8.2e-118	89.80	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S4E072	8.2e-118	89.80	uncharacterized protein LOC107991313 OS=Cucumis melo OX=3656 GN=LOC107991313 PE=...	[more]
A0A0A0LUD5	2.6e-116	89.63	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G050460 PE=4 SV=1	[more]
A0A6J1C586	1.0e-115	89.45	uncharacterized protein LOC111008597 isoform X1 OS=Momordica charantia OX=3673 G...	[more]
A0A6J1K2W0	1.9e-114	86.64	uncharacterized protein LOC111490167 OS=Cucurbita maxima OX=3661 GN=LOC111490167...	[more]

BLAST of HG10020962 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G50410.1	4.7e-57	52.12	unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0...	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 98..113
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 92..113
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..29
None	No IPR available	PANTHER	PTHR22847	WD40 REPEAT PROTEIN	coord: 29..237
None	No IPR available	PANTHER	PTHR22847:SF672	OS08G0531200 PROTEIN	coord: 29..237

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10020962.1	HG10020962.1	mRNA