HG10020875 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10020875
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	short-chain dehydrogenase TIC 32, chloroplastic-like
Location	Chr05: 3173468 .. 3176833 (-)
RNA-Seq Expression	HG10020875
Synteny	HG10020875

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGGAGACTATAAGGTATTTGGTTGGAATTGCAGGGCCAAGTGGGTATGGCTCTAAAGCCAGAGCAGAGCAAGTTACTGAAAGTTTTCAGTTTTCTTCTCCTTTCACTGCCATTACAGGGTTAGTATTTTCATAAAAACCTTGTACAATTACACATACTTTTTTAAAATAAAAGTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAATGCAAATAACCTATTTGATTGTGGTATATTGCACTGTTTTGTTCTAAGTTCACTTTATTCTGCATGTTGTTATCATTTGGATGGTGCTAAGTTCAAAGTTCTGGTCACTTGTGCAAAGTTAAAGCATCTTTTTTATGAGGGAGAAGAAAAAAAAAAACCCACAAAAAATGAGCTAAACCGAACCGAATTAGTTTGTGGTTTTGTATTTAAAATGGTTAAATATCATAGAGGGTTTAATTAGTTACTCTTTTACTTCATTTTCATAACATTTCCTTACTATAGTGTGAGAAAGAAGTCAAATCTTTTACCTTTTGGTCAATGTTTTAGTATTTTAACTAATTGAATTACGTATAGCTTAGTTTTTTAATTAATGCCTTTAAGTTGAGGCTTCATTTTTCTAATTTGGTTTGTGTGAGTGTTCGAAAGTAAATGGATTTAACCAAATTGAATAGGGTCTATTTTGGTTTTCTTGTCAACATTTTCATAATTGAAAGTTTAGCTCCATTGATTAATCATTTGACTTTTGAAAATTAAGCTTATAAATATATTTAAACGATACATATATTAGTTTTTTTGCTTTGCTATCTACTTTTTAGAAATGTTTTGAAAAGTATTTAAAAACTCATTTTGTTATAGAATTTGACAAAAATTCAAATACCAAAAGCCAAAATCAAAATCAAATAGTTACTGATGAAGCCTTAATTATACATATACAAAGAAATAAGGAGACAAATTTCTCAGCATCATCAATCAAGCATCATTCATTAGGGTCTTGAGGATATTAGCAACATCAATCAAACCATATAATGTAACCCAAAGAAAAATAATAACATTAAAAGATGAGTCTTAAAACAAAACAAAACAATCCACAAGAATGATAAAAAAACAACAAAATTAAACCAGGAAAATTTATATGTTTTTTTTTTTTGGGTGCAAAAAGGGGCAACATCAGGAATTGGAGAAGAAACAGCAAGAGTTTTGGCAAAAAGAGGAGTAAGAATAGTAATGGCAGCAAGGGACATGAAGAAGGCAGCAAAAGTGAAAGAGAGGATCAAAAGAGAAAGTCCAGAGGCAGAAATTTTAGTGTCAGAGATAGACCTGAGCTCTCTTGCTTCTGTTAGGAGGTTCTGTGTGGAGTTTGCAGCTTTAGGGCTACCACTCAACATTCTCATGTGAGTTTGTCTTTACTTTTCCCAACCAAAATCCCATTTTCCCCTCTCTAACTTCATCCCCTTTTTGGACACATATTTCCCTTTTGCAGAAACAATGGTGGGGTTTTCTCTCCAAATTTGGAGTATTCTGATGACAAATTTGAATTGACATTTGCTACTAATTATTTGGGTAATTATTTTTCTTCTCATTCCTAAACTCAAACAGAGAAGAATGTTTGATTGTAATCTGTGAACAAATTGAAAAGATTACAATAGATAACTGAATGATGAAAGGGAAAATACCTGTTTGTAGCTCCTCCATGTAAAATTATATCAACTCTGGAAACTCCTTTAACAAAGTTAGAGAAACTTGAATTTACTCAATAATGGCTAAAGAAAGCTGAAGTTATGTCAAATTTAACATCAAAAGGATACAAAATAATGCATTTCAAAACGTTGTTTTCTCTGTAGAATTTATTCGAACAAGATAATTGCAATGTTTCAATCTGTGTGTCTCTTTTTCCCTGCTGCAGGACATTACCTTCTGACAGAATTGCTTTTAGACAAATTGATAGAAACATCAAAGAGAACAGGCATCCAAGGAAGAATTATAAACGTCTCTTCTGTTGTCCACTACTGGGTGAAGAAGGACGATCTCTGCTTCATTCATCTGCTCAACCCAAACAAGCTAGAAAAACTTGCAGCCCCTCCTAGATTATTTTCTTTCAGTCAAATTACAAGTTTTGTCCTTGAATTTTCAAAAGTGTCTAATGGGTCTCTACATCTTCAATTTTGTGTCTAAACTTTAGCAAGTGTCTAATAGGTCATTGAAACTTAAAAAGTGTCTAATAGATTCTTAAACTTTCAATTTCATGTCCAATACATCCTTGAAATAGATCAATGACCTATTCCTTATTTTTTAAACTTCATTGGTCTTCTTGACAAAAAACAGAAAGTTTAGAGCTCTATCAAACATAAAATTAAAATTTATAATTACTAGATCAGATAATTTTAAATTTTCAAACAAGTCATAGACATGTTAGACACAAAATTCTAAGTTCAAGAACTTATTAGTCATTTCTAAAGTTCAAGGACCTATTAAACATAAAATTGAAAGTTTATGGATCAAATAGACACGAAAAGTTATGTGACTACACTTGTAATTTAACTTTTTCGTTTGAGGTCTTTCTCTTTCCTCAAAACACAGAAAGCTCACTAGCTGGTTTCTGGTCAACAATCAGGCATGGTTAGAGAATCAAACTAATACCTGTTTGGGATTTCTGCAGATACAATGGCACGCGTGCTTATGCTCAGTCAAAACTGGCTTGCATTTTACATGCCAAGGAGGTGGCTAGACAGTTGAAGGTTATCTTCCTTCTTCACCTTCTACATTTCCTGCAAAGAGTTAACAAAACAGCCCAAATTCTGAAATTCCAGCCATGTTTACAGGAAAGAGATGCGAATGTGACAATTAATGCAGTGCATCCAGGAATTATAAAGACTGCAATTATCAGAGCACATCGAGGATTAATCACAGGCAGGACCTGTTGATTCTTTCTAATTCCTGATGTATATGATCTTAAACTAATTCTACTTCAACCTAAAAGAAAATGCACAAGAGGACATTGACTTATCATAACTAAATTCTAACCTCTTTTGCAGATTCTCTGTTTTTCATGGCATCAAAGTTACTAAAATCCATTCCTCAGGTATATTCATGAGTTAAAGCAGTACAGAGGGTTTGGATTTGCCTAGGGTTTTTTCATTCATACAAACAGCTGGTAACAACTATTGTGCCTACAGGGTGCTGCTACAACATGCTATGTGGCTCTAAGCCCACAAACACAAAGAAAAACAGGAAAATATTTTGCAGATTGTAATGAAACTAAGTGTTCATCTCTAGCGAACGACGAGCTAGCAGCACGAACGCTATGGATGCAAACTCGCGCCCTAATTCTCAGAGAACTTGGTGAAGCAGCTTGTGCTACTTAA

mRNA sequence

ATGAAGGAGACTATAAGGTATTTGGTTGGAATTGCAGGGCCAAGTGGGTATGGCTCTAAAGCCAGAGCAGAGCAAGTTACTGAAAGGGCAACATCAGGAATTGGAGAAGAAACAGCAAGAGTTTTGGCAAAAAGAGGAGTAAGAATAGTAATGGCAGCAAGGGACATGAAGAAGGCAGCAAAAGTGAAAGAGAGGATCAAAAGAGAAAGTCCAGAGGCAGAAATTTTAGTGTCAGAGATAGACCTGAGCTCTCTTGCTTCTGTTAGGAGGTTCTGTGTGGAGTTTGCAGCTTTAGGGCTACCACTCAACATTCTCATAAACAATGGTGGGGTTTTCTCTCCAAATTTGGAGTATTCTGATGACAAATTTGAATTGACATTTGCTACTAATTATTTGGATTCTCTGTTTTTCATGGCATCAAAGTTACTAAAATCCATTCCTCAGGGTGCTGCTACAACATGCTATGTGGCTCTAAGCCCACAAACACAAAGAAAAACAGGAAAATATTTTGCAGATTGTAATGAAACTAAGTGTTCATCTCTAGCGAACGACGAGCTAGCAGCACGAACGCTATGGATGCAAACTCGCGCCCTAATTCTCAGAGAACTTGGTGAAGCAGCTTGTGCTACTTAA

Coding sequence (CDS)

ATGAAGGAGACTATAAGGTATTTGGTTGGAATTGCAGGGCCAAGTGGGTATGGCTCTAAAGCCAGAGCAGAGCAAGTTACTGAAAGGGCAACATCAGGAATTGGAGAAGAAACAGCAAGAGTTTTGGCAAAAAGAGGAGTAAGAATAGTAATGGCAGCAAGGGACATGAAGAAGGCAGCAAAAGTGAAAGAGAGGATCAAAAGAGAAAGTCCAGAGGCAGAAATTTTAGTGTCAGAGATAGACCTGAGCTCTCTTGCTTCTGTTAGGAGGTTCTGTGTGGAGTTTGCAGCTTTAGGGCTACCACTCAACATTCTCATAAACAATGGTGGGGTTTTCTCTCCAAATTTGGAGTATTCTGATGACAAATTTGAATTGACATTTGCTACTAATTATTTGGATTCTCTGTTTTTCATGGCATCAAAGTTACTAAAATCCATTCCTCAGGGTGCTGCTACAACATGCTATGTGGCTCTAAGCCCACAAACACAAAGAAAAACAGGAAAATATTTTGCAGATTGTAATGAAACTAAGTGTTCATCTCTAGCGAACGACGAGCTAGCAGCACGAACGCTATGGATGCAAACTCGCGCCCTAATTCTCAGAGAACTTGGTGAAGCAGCTTGTGCTACTTAA

Protein sequence

MKETIRYLVGIAGPSGYGSKARAEQVTERATSGIGEETARVLAKRGVRIVMAARDMKKAAKVKERIKRESPEAEILVSEIDLSSLASVRRFCVEFAALGLPLNILINNGGVFSPNLEYSDDKFELTFATNYLDSLFFMASKLLKSIPQGAATTCYVALSPQTQRKTGKYFADCNETKCSSLANDELAARTLWMQTRALILRELGEAACAT

Homology

[Close]

BLAST of HG10020875 vs. NCBI nr
Match: XP_038895224.1 (short-chain dehydrogenase TIC 32 A, chloroplastic-like isoform X2 [Benincasa hispida])

HSP 1 Score: 325.5 bits (833), Expect = 3.4e-85
Identity = 199/327 (60.86%), Postives = 203/327 (62.08%), Query Frame = 0


Query: 1   MKETIRYLVGIAGPSGYGSKARAEQVTER-------------ATSGIGEETARVLAKRGV 60
           MKET+RYLVGIAGPSGYGSKA AE+VTE              ATSGIGEETARVLAKRGV
Sbjct: 1   MKETLRYLVGIAGPSGYGSKASAEKVTESFQFSSPFTAIITGATSGIGEETARVLAKRGV 60

Query: 61  RIVMAARDMKKAAKVKERIKRESPEAEILVSEIDLSSLASVRRFCVEFAALGLPLNILIN 120
           RIVMAARDMKKAAKVKERIKRESPEAEILVSEIDLSSLASVRRFCVEFAALGLPLNILIN
Sbjct: 61  RIVMAARDMKKAAKVKERIKRESPEAEILVSEIDLSSLASVRRFCVEFAALGLPLNILIN 120

Query: 121 NGGVFSPNLEYSDDKFELTFATNYL----------------------------------- 180
           NGGVFSPNLEYS+DKFELTFATNYL                                   
Sbjct: 121 NGGVFSPNLEYSEDKFELTFATNYLGHYLLTELLLDKLIETSKRTGIQGRIINVSSVVHY 180

Query: 181 ------------------------------------------------------------ 208
                                                                       
Sbjct: 181 WVKREDLCFIHLLNPNKYNGTRAYAQSKLACILHAKEVARKLKEQDANVTINAVHPGIVK 240

[Close]

BLAST of HG10020875 vs. NCBI nr
Match: XP_023000696.1 (short-chain dehydrogenase TIC 32, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 322.8 bits (826), Expect = 2.2e-84
Identity = 196/325 (60.31%), Postives = 201/325 (61.85%), Query Frame = 0


Query: 1   MKETIRYLVGIAGPSGYGSKARAEQVTER-------------ATSGIGEETARVLAKRGV 60
           MKET+RYLVGIAGPSGYGSK+ AEQVTE              ATSGIGEETARVLAKRGV
Sbjct: 14  MKETLRYLVGIAGPSGYGSKSSAEQVTEHLQCSSPLTAIITGATSGIGEETARVLAKRGV 73

Query: 61  RIVMAARDMKKAAKVKERIKRESPEAEILVSEIDLSSLASVRRFCVEFAALGLPLNILIN 120
           RIVMAARDMKKAAKV+ERIKRE PEAEILVSEIDLSSLASVRRFC+EFAALGLPLNILIN
Sbjct: 74  RIVMAARDMKKAAKVRERIKREGPEAEILVSEIDLSSLASVRRFCMEFAALGLPLNILIN 133

Query: 121 NGGVFSPNLEYSDDKFELTFATNYL----------------------------------- 180
           NGGVFSPNLEYSDDK ELTFATNYL                                   
Sbjct: 134 NGGVFSPNLEYSDDKLELTFATNYLGHYLLTELLLDKLIETSRRTGIQGRIINVSSVVHC 193

Query: 181 ------------------------------------------------------------ 206
                                                                       
Sbjct: 194 WVKKDDLCFTHLLNPNKYNGTRAYAQSKLACILHAKEVARQLKERDANVTINAVHPGIVK 253

[Close]

BLAST of HG10020875 vs. NCBI nr
Match: XP_038895223.1 (short-chain dehydrogenase TIC 32 A, chloroplastic-like isoform X1 [Benincasa hispida])

HSP 1 Score: 314.7 bits (805), Expect = 6.0e-82
Identity = 199/355 (56.06%), Postives = 203/355 (57.18%), Query Frame = 0


Query: 1   MKETIRYLVGIAGPSGYGSKARAEQVTER-------------ATSGIGEETARVLAKRGV 60
           MKET+RYLVGIAGPSGYGSKA AE+VTE              ATSGIGEETARVLAKRGV
Sbjct: 1   MKETLRYLVGIAGPSGYGSKASAEKVTESFQFSSPFTAIITGATSGIGEETARVLAKRGV 60

Query: 61  RIVMAARDMKKAAKVKERIKRESPEAEILVSEIDLSSLASVRRFCVEFAALGLPLNILIN 120
           RIVMAARDMKKAAKVKERIKRESPEAEILVSEIDLSSLASVRRFCVEFAALGLPLNILIN
Sbjct: 61  RIVMAARDMKKAAKVKERIKRESPEAEILVSEIDLSSLASVRRFCVEFAALGLPLNILIN 120

Query: 121 NGGVFSPNLEYSDDKFELTFATNYL----------------------------------- 180
           NGGVFSPNLEYS+DKFELTFATNYL                                   
Sbjct: 121 NGGVFSPNLEYSEDKFELTFATNYLGHYLLTELLLDKLIETSKRTGIQGRIINVSSVVHY 180

Query: 181 ------------------------------------------------------------ 208
                                                                       
Sbjct: 181 WVKREDLCFIHLLNPNKYNGTRAYAQSKLACILHAKEVARKLKVIFLLHLLHFLHRINKT 240

[Close]

BLAST of HG10020875 vs. NCBI nr
Match: XP_023519347.1 (short-chain dehydrogenase TIC 32, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 314.7 bits (805), Expect = 6.0e-82
Identity = 192/325 (59.08%), Postives = 199/325 (61.23%), Query Frame = 0


Query: 1   MKETIRYLVGIAGPSGYGSKARAEQVTER-------------ATSGIGEETARVLAKRGV 60
           MKET+RYLVGIAGPSGYGSK+ AEQVTE              ATSGIGEETARVLAKRG+
Sbjct: 1   MKETLRYLVGIAGPSGYGSKSSAEQVTEHLQCSSPLTAIITGATSGIGEETARVLAKRGM 60

Query: 61  RIVMAARDMKKAAKVKERIKRESPEAEILVSEIDLSSLASVRRFCVEFAALGLPLNILIN 120
           RIVMAARDMKKAAKVKERIKRE PEAEILVSEIDLSSLASVRRFC+EFAALGLPLNILIN
Sbjct: 61  RIVMAARDMKKAAKVKERIKREGPEAEILVSEIDLSSLASVRRFCMEFAALGLPLNILIN 120

Query: 121 NGGVFSPNLEYSDDKFELTFATNYL----------------------------------- 180
           NGGVFSPNLEYSDDK ELTFATNYL                                   
Sbjct: 121 NGGVFSPNLEYSDDKLELTFATNYLGHYIMTELLLDKLIETSKRTGIQGRIINVSSVVHC 180

Query: 181 ------------------------------------------------------------ 206
                                                                       
Sbjct: 181 WVKKDDLCFTHLLNPNKYNGTRAYAQSKLACILHAKEVARQLKERDANVTINAVHPGIVK 240

[Close]

BLAST of HG10020875 vs. NCBI nr
Match: XP_022924073.1 (short-chain dehydrogenase TIC 32, chloroplastic-like [Cucurbita moschata])

HSP 1 Score: 314.3 bits (804), Expect = 7.9e-82
Identity = 191/325 (58.77%), Postives = 199/325 (61.23%), Query Frame = 0


Query: 1   MKETIRYLVGIAGPSGYGSKARAEQVTER-------------ATSGIGEETARVLAKRGV 60
           MKET+RYLVG+AGPSGYGSK+ AEQVTE              ATSGIGEETARVLAKRGV
Sbjct: 14  MKETLRYLVGMAGPSGYGSKSSAEQVTEHLQCSSPLTAIITGATSGIGEETARVLAKRGV 73

Query: 61  RIVMAARDMKKAAKVKERIKRESPEAEILVSEIDLSSLASVRRFCVEFAALGLPLNILIN 120
           RIVMAARDMKKAAKV+ERIKR  PEAEIL+SEIDLSSLASVRRFC+EFAALGLPLNILIN
Sbjct: 74  RIVMAARDMKKAAKVRERIKRGGPEAEILMSEIDLSSLASVRRFCMEFAALGLPLNILIN 133

Query: 121 NGGVFSPNLEYSDDKFELTFATNYL----------------------------------- 180
           NGGVFSPNLEYSDDK ELTFATNYL                                   
Sbjct: 134 NGGVFSPNLEYSDDKLELTFATNYLGHYLLTELLLDKLIETSRRTGIQGRIINVSSVVHC 193

Query: 181 ------------------------------------------------------------ 206
                                                                       
Sbjct: 194 WVKKDDLCFTHLLNPNKYNGTRAYAQSKLACILHAKEVARQLKERDANVTINAVHPGIVK 253

[Close]

BLAST of HG10020875 vs. ExPASy Swiss-Prot
Match: A2RVM0 (Short-chain dehydrogenase TIC 32, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TIC32 PE=2 SV=1)

HSP 1 Score: 117.9 bits (294), Expect = 1.4e-25
Identity = 96/320 (30.00%), Postives = 130/320 (40.62%), Query Frame = 0


Query: 7   YLVGIAGPSGYGSKARAEQVTE------------RATSGIGEETARVLAKRGVRIVMAAR 66
           +  G  G SG+ S++ AE+VT              A+SGIG ETARVL+ RGV +VMA R
Sbjct: 2   WFFGSKGASGFSSRSTAEEVTHGVDGTGLTAIVTGASSGIGVETARVLSLRGVHVVMAVR 61

Query: 67  DMKKAAKVKERIKRESPEAEILVSEIDLSSLASVRRFCVEFAALGLPLNILINNGGVFSP 126
           +    AKVKE I ++ P A++ V E+DLSS+ SVR+F  E+ + GLPLN+LINN G+ + 
Sbjct: 62  NTDSGAKVKEDIVKQVPGAKLDVMELDLSSMQSVRKFASEYKSTGLPLNLLINNAGIMAC 121

Query: 127 NLEYSDDKFELTFATNYLDSLFF------------------------------------- 186
               S D  EL FATN+L                                          
Sbjct: 122 PFMLSKDNIELQFATNHLGHFLLTKLLLDTMKSTSRESKREGRIVNLSSEAHRFSYPEGV 181

Query: 187 ------------------------------------------------------------ 208
                                                                       
Sbjct: 182 RFDKINDKSSYSSMRAYGQSKLCNVLHANELTKQLKEDGVNITANSLHPGAIMTNLGRYF 241

[Close]

BLAST of HG10020875 vs. ExPASy Swiss-Prot
Match: A0A078IS66 (Short-chain dehydrogenase TIC 32 A, chloroplastic OS=Brassica napus OX=3708 GN=TIC32A PE=2 SV=1)

HSP 1 Score: 112.1 bits (279), Expect = 7.8e-24
Identity = 97/303 (32.01%), Postives = 118/303 (38.94%), Query Frame = 0


Query: 8   LVGIAGPSGYGSKARAEQVTER------------ATSGIGEETARVLAKRGVRIVMAARD 67
           + G AG SGYGS + AE VT               TSGIG E ARVL  RG  +++A+R+
Sbjct: 7   VTGKAGKSGYGSASTAEDVTHSIDAKHLTAIITGGTSGIGLEAARVLGMRGAHVIIASRN 66

Query: 68  MKKAAKVKERIKRESPEAEILVSEIDLSSLASVRRFCVEFAALGLPLNILINNGGVFSPN 127
            K A   KE I +  P A I   ++DLSS+ SVR F  +F AL +PLNILINN GV    
Sbjct: 67  TKAANDSKEMILQMYPNARIDCLQLDLSSIKSVRSFIHQFLALNVPLNILINNAGVMFCP 126

Query: 128 LEYSDDKFELTFATN---------------------------------------YLDSLF 187
            + S+D  E  FATN                                       Y + + 
Sbjct: 127 FQLSEDGIESQFATNHIGHFLLTNLLLDKMKSSARESGIEGRIVNLSSIAHTYTYTEGIM 186

Query: 188 F----------------------------------------------------------- 193
           F                                                           
Sbjct: 187 FDYINDPDRYSEKKAYGQSKLANLLHSNALSRKLQEEGVNITINSVHPGLITTNLFRHSG 246

[Close]

BLAST of HG10020875 vs. ExPASy Swiss-Prot
Match: A0A078ISJ6 (Short-chain dehydrogenase TIC 32 B, chloroplastic OS=Brassica napus OX=3708 GN=TIC32B PE=3 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 1.0e-23
Identity = 97/303 (32.01%), Postives = 117/303 (38.61%), Query Frame = 0


Query: 8   LVGIAGPSGYGSKARAEQVTER------------ATSGIGEETARVLAKRGVRIVMAARD 67
           + G AG SGYGS + AE VT               TSGIG E ARVL  RG  +++AAR+
Sbjct: 7   VTGKAGKSGYGSASTAEDVTHSIDAKHLTAIITGGTSGIGLEAARVLGMRGAHVIIAARN 66

Query: 68  MKKAAKVKERIKRESPEAEILVSEIDLSSLASVRRFCVEFAALGLPLNILINNGGVFSPN 127
            K A   KE I +  P A I   ++DLSS+ SVR F  +F AL +PLNILINN GV    
Sbjct: 67  TKAANDSKEMILQMYPNARIDCLQLDLSSIKSVRSFIHQFLALNVPLNILINNAGVMFCP 126

Query: 128 LEYSDDKFELTFATN---------------------------------------YLDSLF 187
            + S+D  E  FATN                                       Y + + 
Sbjct: 127 FQLSEDGIESQFATNHIGHFLLTNLLLDKMKSSARESGIEGRIVNLSSIAHTYTYTEGIM 186

Query: 188 F----------------------------------------------------------- 193
           F                                                           
Sbjct: 187 FDYINDPDRYSEKKAYGQSKLANLLHSNALSRKLQEEGVNITINSVHPGLITTNLFRHSG 246

[Close]

BLAST of HG10020875 vs. ExPASy Swiss-Prot
Match: Q6RVV4 (Short-chain dehydrogenase TIC 32, chloroplastic OS=Pisum sativum OX=3888 GN=TIC32 PE=1 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 1.1e-20
Identity = 87/298 (29.19%), Postives = 117/298 (39.26%), Query Frame = 0


Query: 13  GPSGYGSKARAEQVTE------------RATSGIGEETARVLAKRGVRIVMAARDMKKAA 72
           G SG+   + AEQVT              A+SGIG ET RVLA RG  ++M  R+M  A 
Sbjct: 9   GVSGFSGSSTAEQVTHGIDATGLTAIVTGASSGIGAETTRVLALRGAHVIMGVRNMVAAK 68

Query: 73  KVKERIKRESPEAEILVSEIDLSSLASVRRFCVEFAALGLPLNILINNGGVFSPNLEYSD 132
            VK+ I ++ P A++   E+DLSSL SV++F  EF + G PLNILINN G+ +   + S 
Sbjct: 69  DVKDTILKDIPSAKVDAIELDLSSLDSVKKFASEFNSSGRPLNILINNAGIMACPFKLSK 128

Query: 133 DKFELTFATNYL------------------------------------------------ 192
           D  EL FATN++                                                
Sbjct: 129 DNIELQFATNHIGHFLLTNLLLDTMKKTTRESKKEGRIVNVASEAHRFAYPEGIRFDKIN 188

[Close]

BLAST of HG10020875 vs. ExPASy Swiss-Prot
Match: Q8BYK4 (Retinol dehydrogenase 12 OS=Mus musculus OX=10090 GN=Rdh12 PE=2 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 6.2e-13
Identity = 46/121 (38.02%), Postives = 68/121 (56.20%), Query Frame = 0


Query: 30  ATSGIGEETARVLAKRGVRIVMAARDMKKAAKVKERIKRESPEAEILVSEIDLSSLASVR 89
           A +GIG+ETAR LA+RG R+ +A RD+ K       I+ ++  +++LV ++DLS   S+R
Sbjct: 47  ANTGIGKETARELARRGARVYIACRDVLKGESAASEIRADTKNSQVLVRKLDLSDTKSIR 106

Query: 90  RFCVEFAALGLPLNILINNGGVFSPNLEYSDDKFELTFATNYLDSLFFMASKLLKSIPQG 149
            F   F A    L+ILINN GV       + D FE  F  N+L   F +   LL+ + + 
Sbjct: 107 AFAERFLAEEKKLHILINNAGVMMCPYSKTTDGFETHFGVNHLGH-FLLTYLLLERLKES 166

Query: 150 A 151
           A
Sbjct: 167 A 166

[Close]

BLAST of HG10020875 vs. ExPASy TrEMBL
Match: A0A6J1KGJ5 (short-chain dehydrogenase TIC 32, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111495058 PE=3 SV=1)

HSP 1 Score: 322.8 bits (826), Expect = 1.1e-84
Identity = 196/325 (60.31%), Postives = 201/325 (61.85%), Query Frame = 0


Query: 1   MKETIRYLVGIAGPSGYGSKARAEQVTER-------------ATSGIGEETARVLAKRGV 60
           MKET+RYLVGIAGPSGYGSK+ AEQVTE              ATSGIGEETARVLAKRGV
Sbjct: 14  MKETLRYLVGIAGPSGYGSKSSAEQVTEHLQCSSPLTAIITGATSGIGEETARVLAKRGV 73

Query: 61  RIVMAARDMKKAAKVKERIKRESPEAEILVSEIDLSSLASVRRFCVEFAALGLPLNILIN 120
           RIVMAARDMKKAAKV+ERIKRE PEAEILVSEIDLSSLASVRRFC+EFAALGLPLNILIN
Sbjct: 74  RIVMAARDMKKAAKVRERIKREGPEAEILVSEIDLSSLASVRRFCMEFAALGLPLNILIN 133

Query: 121 NGGVFSPNLEYSDDKFELTFATNYL----------------------------------- 180
           NGGVFSPNLEYSDDK ELTFATNYL                                   
Sbjct: 134 NGGVFSPNLEYSDDKLELTFATNYLGHYLLTELLLDKLIETSRRTGIQGRIINVSSVVHC 193

Query: 181 ------------------------------------------------------------ 206
                                                                       
Sbjct: 194 WVKKDDLCFTHLLNPNKYNGTRAYAQSKLACILHAKEVARQLKERDANVTINAVHPGIVK 253

[Close]

BLAST of HG10020875 vs. ExPASy TrEMBL
Match: A0A6J1EBB9 (short-chain dehydrogenase TIC 32, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111431615 PE=3 SV=1)

HSP 1 Score: 314.3 bits (804), Expect = 3.8e-82
Identity = 191/325 (58.77%), Postives = 199/325 (61.23%), Query Frame = 0


Query: 1   MKETIRYLVGIAGPSGYGSKARAEQVTER-------------ATSGIGEETARVLAKRGV 60
           MKET+RYLVG+AGPSGYGSK+ AEQVTE              ATSGIGEETARVLAKRGV
Sbjct: 14  MKETLRYLVGMAGPSGYGSKSSAEQVTEHLQCSSPLTAIITGATSGIGEETARVLAKRGV 73

Query: 61  RIVMAARDMKKAAKVKERIKRESPEAEILVSEIDLSSLASVRRFCVEFAALGLPLNILIN 120
           RIVMAARDMKKAAKV+ERIKR  PEAEIL+SEIDLSSLASVRRFC+EFAALGLPLNILIN
Sbjct: 74  RIVMAARDMKKAAKVRERIKRGGPEAEILMSEIDLSSLASVRRFCMEFAALGLPLNILIN 133

Query: 121 NGGVFSPNLEYSDDKFELTFATNYL----------------------------------- 180
           NGGVFSPNLEYSDDK ELTFATNYL                                   
Sbjct: 134 NGGVFSPNLEYSDDKLELTFATNYLGHYLLTELLLDKLIETSRRTGIQGRIINVSSVVHC 193

Query: 181 ------------------------------------------------------------ 206
                                                                       
Sbjct: 194 WVKKDDLCFTHLLNPNKYNGTRAYAQSKLACILHAKEVARQLKERDANVTINAVHPGIVK 253

[Close]

BLAST of HG10020875 vs. ExPASy TrEMBL
Match: A0A6J1C5L3 (short-chain dehydrogenase TIC 32, chloroplastic-like OS=Momordica charantia OX=3673 GN=LOC111008680 PE=3 SV=1)

HSP 1 Score: 301.2 bits (770), Expect = 3.3e-78
Identity = 185/329 (56.23%), Postives = 198/329 (60.18%), Query Frame = 0


Query: 1   MKETIRYLVGIAGPSGYGSKARAEQVTER-------------ATSGIGEETARVLAKRGV 60
           MKET+RYL GIAG SGYGSK+ AEQVT+              ATSGIGEETARV+AKRGV
Sbjct: 1   MKETLRYLAGIAGQSGYGSKSTAEQVTQHSHFSSPLTAIITGATSGIGEETARVMAKRGV 60

Query: 61  RIVMAARDMKKAAKVKERIKRESPEAEILVSEIDLSSLASVRRFCVEFAALGLPLNILIN 120
           RIV+AARD+KKAAKVKERIKRES EAEILVSEIDLSSLASVRRFCV+FAA GLPLNILIN
Sbjct: 61  RIVIAARDLKKAAKVKERIKRESAEAEILVSEIDLSSLASVRRFCVDFAASGLPLNILIN 120

Query: 121 NGGVFSPNLEYSDDKFELTFATNYL----------------------------------- 180
           N GVFSPNLEYSDDKFELTFATNYL                                   
Sbjct: 121 NAGVFSPNLEYSDDKFELTFATNYLGHYLLTEMLLDNLIETSKRTGIQGRIINVSSVVHC 180

Query: 181 ------------------------------------------------------------ 210
                                                                       
Sbjct: 181 WVKKDGLCFTHLLNPNKYNATLAYAQSKLACILHAKEVARQLKERAANVTVNALHPGIVK 240

[Close]

BLAST of HG10020875 vs. ExPASy TrEMBL
Match: A0A2N9IZ58 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS58064 PE=4 SV=1)

HSP 1 Score: 278.9 bits (712), Expect = 1.8e-71
Identity = 143/222 (64.41%), Postives = 178/222 (80.18%), Query Frame = 0


Query: 1   MKETIRYLVGIAGPSGYGSKARAEQVTE---------------RATSGIGEETARVLAKR 60
           MKET+RYL G+AGPSGYGS + AEQ+TE                ATSGIG ETARVLAK+
Sbjct: 1   MKETLRYLAGLAGPSGYGSNSTAEQITEDFSCIVPSHLTAIITGATSGIGAETARVLAKK 60

Query: 61  GVRIVMAARDMKKAAKVKERIKRESPEAEILVSEIDLSSLASVRRFCVEFAALGLPLNIL 120
           GVRIV+ ARD+K+A+++ E I++ESP+AEI++ E+DLSSL SV+RFC +F +LGLPLNIL
Sbjct: 61  GVRIVIPARDLKRASELMEEIQKESPQAEIILLEVDLSSLTSVKRFCTQFLSLGLPLNIL 120

Query: 121 INNGGVFSPNLEYSDDKFELTFATNYLDSLFFMASKLLKSIPQGAATTCYVALSPQTQRK 180
           INN G+FS NLE+S+DK E+TF TNYLDS+FF+ASKLLKS  QGA+TTCYVALSPQ +  
Sbjct: 121 INNAGIFSQNLEFSEDKIEMTFTTNYLDSIFFIASKLLKSTSQGASTTCYVALSPQLEGV 180

Query: 181 TGKYFADCNETKCSSLANDELAARTLWMQTRALILRELGEAA 208
           TGKY+ADCNE+ CSSLANDE  A+ L+ QTRA+I + LG+ A
Sbjct: 181 TGKYYADCNESNCSSLANDESEAQKLFKQTRAVIYKRLGQPA 222

[Close]

BLAST of HG10020875 vs. ExPASy TrEMBL
Match: A0A6A2Y1B9 (Tryptophan aminotransferase-related protein 2-like OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00112988pilonHSYRG00149 PE=4 SV=1)

HSP 1 Score: 275.8 bits (704), Expect = 1.5e-70
Identity = 145/218 (66.51%), Postives = 169/218 (77.52%), Query Frame = 0


Query: 1   MKETIRYLVGIAGPSGYGSKARAEQVTER---------------ATSGIGEETARVLAKR 60
           MKET+RYL GIAGP+GYGSK  A+QV                  ATSGIG ETARVLAKR
Sbjct: 1   MKETLRYLAGIAGPNGYGSKTTADQVVRSFSSSPHHHLTAIITGATSGIGAETARVLAKR 60

Query: 61  GVRIVMAARDMKKAAKVKERIKRESPEAEILVSEIDLSSLASVRRFCVEFAALGLPLNIL 120
           GVR+V+ ARD KKA  +KE I++E+P+ EI + +IDLSSLASV+RFC +F ALGLPLNIL
Sbjct: 61  GVRLVIPARDRKKAVALKEGIEKENPKVEIFLFDIDLSSLASVKRFCTQFLALGLPLNIL 120

Query: 121 INNGGVFSPNLEYSDDKFELTFATNYLDSLFFMASKLLKSIPQGAATTCYVALSPQTQRK 180
           INN G+FS NLE+S+DK E+TFATNY+DSLFF+ASKLLKS  QGA+T+CYVALSPQ Q  
Sbjct: 121 INNAGIFSQNLEFSEDKIEMTFATNYIDSLFFIASKLLKSTSQGASTSCYVALSPQAQEL 180

Query: 181 TGKYFADCNETKCSSLANDELAARTLWMQTRALILREL 204
           TGKYFADCNE  CS+L+NDE  AR LW  TRALI R L
Sbjct: 181 TGKYFADCNECSCSALSNDESEARRLWTHTRALIHRRL 218

[Close]

BLAST of HG10020875 vs. TAIR 10
Match: AT5G50130.1 (NAD(P)-binding Rossmann-fold superfamily protein )

HSP 1 Score: 223.8 bits (569), Expect = 1.3e-58
Identity = 147/327 (44.95%), Postives = 171/327 (52.29%), Query Frame = 0


Query: 1   MKETIRYLVGIAGPSGYGSKARAEQVTERA--------------TSGIGEETARVLAKRG 60
           MK T+RYL GIAGP+G+GS++ AEQVT+ +              TSGIG ETARVLAKRG
Sbjct: 1   MKGTLRYLAGIAGPNGFGSRSTAEQVTQHSFFPCSHLTAIITGGTSGIGAETARVLAKRG 60

Query: 61  VRIVMAARDMKKAAKVKERIKRESPEAEILVSEIDLSSLASVRRFCVEFAALGLPLNILI 120
           VR+VMA RDMKKA  VKERI RE+PEA+I++ EIDLSSL+SV RFC +F +  LPLNILI
Sbjct: 61  VRVVMAVRDMKKAEMVKERIIRENPEADIILFEIDLSSLSSVARFCSQFLSQDLPLNILI 120

Query: 121 NNGGVFSPNLEYSDDKFELTFATNYL---------------------------------- 180
           NN GVFSPNLE+S++K ELTFATN+L                                  
Sbjct: 121 NNAGVFSPNLEFSEEKIELTFATNFLGHYLLTEMLIEKMIDTAEKSGIEGRIINLSSVIH 180

Query: 181 ------------------------------------------------------------ 206
                                                                       
Sbjct: 181 NWVKPDCFSFPKLLHPISRYNGTRAYAQSKLATILHAKALSKQLKDRNANVTINAVHPGI 240

[Close]

BLAST of HG10020875 vs. TAIR 10
Match: AT5G50130.2 (NAD(P)-binding Rossmann-fold superfamily protein )

HSP 1 Score: 178.7 bits (452), Expect = 4.8e-45
Identity = 96/146 (65.75%), Postives = 115/146 (78.77%), Query Frame = 0


Query: 1   MKETIRYLVGIAGPSGYGSKARAEQVTERA--------------TSGIGEETARVLAKRG 60
           MK T+RYL GIAGP+G+GS++ AEQVT+ +              TSGIG ETARVLAKRG
Sbjct: 1   MKGTLRYLAGIAGPNGFGSRSTAEQVTQHSFFPCSHLTAIITGGTSGIGAETARVLAKRG 60

Query: 61  VRIVMAARDMKKAAKVKERIKRESPEAEILVSEIDLSSLASVRRFCVEFAALGLPLNILI 120
           VR+VMA RDMKKA  VKERI RE+PEA+I++ EIDLSSL+SV RFC +F +  LPLNILI
Sbjct: 61  VRVVMAVRDMKKAEMVKERIIRENPEADIILFEIDLSSLSSVARFCSQFLSQDLPLNILI 120

Query: 121 NNGGVFSPNLEYSDDKFELTFATNYL 133
           NN GVFSPNLE+S++K ELTFATN+L
Sbjct: 121 NNAGVFSPNLEFSEEKIELTFATNFL 146

[Close]

BLAST of HG10020875 vs. TAIR 10
Match: AT4G24050.1 (NAD(P)-binding Rossmann-fold superfamily protein )

HSP 1 Score: 161.8 bits (408), Expect = 6.1e-40
Identity = 113/320 (35.31%), Postives = 144/320 (45.00%), Query Frame = 0


Query: 1   MKETIRYLVGIAGPSGYGSKARAEQVTER------------ATSGIGEETARVLAKRGVR 60
           M ET +YL+G AG SG+GSK+ AE+VTE             ATSGIG ETARVLAKRG R
Sbjct: 1   MIETGKYLLGAAGASGFGSKSTAEEVTENCDLRSITAVITGATSGIGAETARVLAKRGAR 60

Query: 61  IVMAARDMKKAAKVKERIKRESPEAEILVSEIDLSSLASVRRFCVEFAALGLPLNILINN 120
           ++  AR++K A + KERI  E PE EI+V ++DLSS+ASVR F  +F +L LPLN+LINN
Sbjct: 61  LIFPARNVKAAEEAKERIVSEFPETEIVVMKLDLSSIASVRNFVADFESLDLPLNLLINN 120

Query: 121 GGVFSPNLEYSDDKFELTFATNYL------------------------------------ 180
            G  +     S+D  E+TFATNYL                                    
Sbjct: 121 AGKLAHEHAISEDGIEMTFATNYLGHFLLTNLLLNKMIQTAEETGVQGRIVNVTSGIHGW 180

Query: 181 ------------------------------------------------------------ 200
                                                                       
Sbjct: 181 FSGDLIEYLRLISQPKCQFDATRAYALSKLANVLHTKELSSRLQKIGANVTVNCVHPGVV 240

[Close]

BLAST of HG10020875 vs. TAIR 10
Match: AT1G64590.1 (NAD(P)-binding Rossmann-fold superfamily protein )

HSP 1 Score: 160.6 bits (405), Expect = 1.4e-39
Identity = 112/320 (35.00%), Postives = 144/320 (45.00%), Query Frame = 0


Query: 1   MKETIRYLVGIAGPSGYGSKARAEQVT------------ERATSGIGEETARVLAKRGVR 60
           M ET+++L+G  GPSG+GS++ A+ VT              ATSGIG ETARVLAKRG R
Sbjct: 1   MIETVKHLIGSGGPSGFGSRSTADHVTCNSDLRSLTAIITGATSGIGAETARVLAKRGAR 60

Query: 61  IVMAARDMKKAAKVKERIKRESPEAEILVSEIDLSSLASVRRFCVEFAALGLPLNILINN 120
           +V+ AR +K A + K RI  E P+AEI+V  +DLSSL SVRRF  +F +L LPLNILINN
Sbjct: 61  LVLPARSVKTAEETKARILSEFPDAEIIVMHLDLSSLTSVRRFVDDFESLNLPLNILINN 120

Query: 121 GGVFSPNLEYSDDKFELTFATNYL------------------------------------ 180
            G ++     S+D  E+TFATNYL                                    
Sbjct: 121 AGKYAHKHALSEDGVEMTFATNYLGHFLLTKLLLKKMIETAAQTGVQGRIVNVTSVVHSW 180

Query: 181 ------------------------------------------------------------ 200
                                                                       
Sbjct: 181 FSGDMLQYLADISRNNRNYDATRAYALSKLANVLHTVELSRLLHKMDANVTANCVHPGIV 240

[Close]

BLAST of HG10020875 vs. TAIR 10
Match: AT4G23430.3 (NAD(P)-binding Rossmann-fold superfamily protein )

HSP 1 Score: 125.9 bits (315), Expect = 3.7e-29
Identity = 98/308 (31.82%), Postives = 135/308 (43.83%), Query Frame = 0


Query: 7   YLVGIAGPSGYGSKARAEQVTE------------RATSGIGEETARVLAKRGVRIVMAAR 66
           +  G  G SG+ S++ AE+VT              A+SGIG ETARVL+ RGV +VMA R
Sbjct: 2   WFFGSKGASGFSSRSTAEEVTHGVDGTGLTAIVTGASSGIGVETARVLSLRGVHVVMAVR 61

Query: 67  DMKKAAKVKERIKRESPEAEILVSEIDLSSLASVRRFCVEFAALGLPLNILINNGGVFSP 126
           +    AKVKE I ++ P A++ V E+DLSS+ SVR+F  E+ + GLPLN+LINN G+ + 
Sbjct: 62  NTDSGAKVKEDIVKQVPGAKLDVMELDLSSMQSVRKFASEYKSTGLPLNLLINNAGIMAC 121

Query: 127 NLEYSDDKFELTFATNYLDSL--------------------------------------- 186
               S D  EL FATN+LD++                                       
Sbjct: 122 PFMLSKDNIELQFATNHLDTMKSTSRESKREGRIVNLSSEAHRFSYPEGVRFDKINDKSS 181

Query: 187 ----------------------------------------------FF----------MA 208
                                                         +F          +A
Sbjct: 182 SMRAYGQSKLCNVLHANELTKQLKEDGVNITANSLHPGAIMTNLGRYFNPYLAVAVGAVA 241

The following BLAST results are available for this feature:

BLAST of HG10020875 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038895224.1	3.4e-85	60.86	short-chain dehydrogenase TIC 32 A, chloroplastic-like isoform X2 [Benincasa his...	[more]
XP_023000696.1	2.2e-84	60.31	short-chain dehydrogenase TIC 32, chloroplastic-like [Cucurbita maxima]	[more]
XP_038895223.1	6.0e-82	56.06	short-chain dehydrogenase TIC 32 A, chloroplastic-like isoform X1 [Benincasa his...	[more]
XP_023519347.1	6.0e-82	59.08	short-chain dehydrogenase TIC 32, chloroplastic-like [Cucurbita pepo subsp. pepo...	[more]
XP_022924073.1	7.9e-82	58.77	short-chain dehydrogenase TIC 32, chloroplastic-like [Cucurbita moschata]	[more]

BLAST of HG10020875 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
A2RVM0	1.4e-25	30.00	Short-chain dehydrogenase TIC 32, chloroplastic OS=Arabidopsis thaliana OX=3702 ...	[more]
A0A078IS66	7.8e-24	32.01	Short-chain dehydrogenase TIC 32 A, chloroplastic OS=Brassica napus OX=3708 GN=T...	[more]
A0A078ISJ6	1.0e-23	32.01	Short-chain dehydrogenase TIC 32 B, chloroplastic OS=Brassica napus OX=3708 GN=T...	[more]
Q6RVV4	1.1e-20	29.19	Short-chain dehydrogenase TIC 32, chloroplastic OS=Pisum sativum OX=3888 GN=TIC3...	[more]
Q8BYK4	6.2e-13	38.02	Retinol dehydrogenase 12 OS=Mus musculus OX=10090 GN=Rdh12 PE=2 SV=1	[more]

BLAST of HG10020875 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KGJ5	1.1e-84	60.31	short-chain dehydrogenase TIC 32, chloroplastic-like OS=Cucurbita maxima OX=3661...	[more]
A0A6J1EBB9	3.8e-82	58.77	short-chain dehydrogenase TIC 32, chloroplastic-like OS=Cucurbita moschata OX=36...	[more]
A0A6J1C5L3	3.3e-78	56.23	short-chain dehydrogenase TIC 32, chloroplastic-like OS=Momordica charantia OX=3...	[more]
A0A2N9IZ58	1.8e-71	64.41	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS58064 PE=4 SV=1	[more]
A0A6A2Y1B9	1.5e-70	66.51	Tryptophan aminotransferase-related protein 2-like OS=Hibiscus syriacus OX=10633...	[more]

BLAST of HG10020875 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G50130.1	1.3e-58	44.95	NAD(P)-binding Rossmann-fold superfamily protein	[more]
AT5G50130.2	4.8e-45	65.75	NAD(P)-binding Rossmann-fold superfamily protein	[more]
AT4G24050.1	6.1e-40	35.31	NAD(P)-binding Rossmann-fold superfamily protein	[more]
AT1G64590.1	1.4e-39	35.00	NAD(P)-binding Rossmann-fold superfamily protein	[more]
AT4G23430.3	3.7e-29	31.82	NAD(P)-binding Rossmann-fold superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.40.50.720		coord: 30..146 e-value: 4.6E-25 score: 90.3
None	No IPR available	PANTHER	PTHR24320:SF198	NAD(P)-BINDING ROSSMANN-FOLD SUPERFAMILY PROTEIN	coord: 4..132
None	No IPR available	PANTHER	PTHR24320:SF198	NAD(P)-BINDING ROSSMANN-FOLD SUPERFAMILY PROTEIN	coord: 133..203
None	No IPR available	PANTHER	PTHR24320	RETINOL DEHYDROGENASE	coord: 4..132
None	No IPR available	PANTHER	PTHR24320	RETINOL DEHYDROGENASE	coord: 133..203
IPR002347	Short-chain dehydrogenase/reductase SDR	PFAM	PF00106	adh_short	coord: 30..146 e-value: 1.1E-16 score: 60.9
IPR036291	NAD(P)-binding domain superfamily	SUPERFAMILY	51735	NAD(P)-binding Rossmann-fold domains	coord: 30..138

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10020875.1	HG10020875.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0016491	oxidoreductase activity
molecular_function	GO:0016740	transferase activity