HG10020843 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10020843
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	NHL domain protein
Location	Chr05: 2889946 .. 2890446 (-)
RNA-Seq Expression	HG10020843
Synteny	HG10020843

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGAGACCGTGACGGAGCTTTCAAAGAATTAGAATCAATCGGAGAAATCGACGGCGCCGATGCTCTTTTAGCCTCTAAACGCTATAGTTGTTTTTGCTTCCCTTGCTTCGGACCTCGCCGGTCGGCTTCCGATGAGCTTTCATGGTGGGAGCGGGTGAAGACGAAGGCAAAATCCACGAAGTTCGACGGTGAAGATCACTGGTGGACCGGCGGAATCAGATCCCTCAAAAAGCTTCGTGAATGGTCGGAGATCGTCGCCGGTCCGAGATGGAAAACTTTCATTCGTCGGTTCAACCGGAACCGTCCCGCCACTGTGAAGCTCGGGAAATTCCAATATGATCCTATCAGTTACGCTTTGAATTTCGACGAGGGACATAATGGTGATGTGGATTTCGAAGGGGATGAATACGGTGGTGGTGGGTTTCAGAATTTCTCCGACCGGTTTGCTGCCGTGCCGACGCCTGTGAAGTCGTCGGGTGCGGCGGCGGTGAAGGGTTAG

mRNA sequence

ATGGGAGACCGTGACGGAGCTTTCAAAGAATTAGAATCAATCGGAGAAATCGACGGCGCCGATGCTCTTTTAGCCTCTAAACGCTATAGTTGTTTTTGCTTCCCTTGCTTCGGACCTCGCCGGTCGGCTTCCGATGAGCTTTCATGGTGGGAGCGGGTGAAGACGAAGGCAAAATCCACGAAGTTCGACGGTGAAGATCACTGGTGGACCGGCGGAATCAGATCCCTCAAAAAGCTTCGTGAATGGTCGGAGATCGTCGCCGGTCCGAGATGGAAAACTTTCATTCGTCGGTTCAACCGGAACCGTCCCGCCACTGTGAAGCTCGGGAAATTCCAATATGATCCTATCAGTTACGCTTTGAATTTCGACGAGGGACATAATGGTGATGTGGATTTCGAAGGGGATGAATACGGTGGTGGTGGGTTTCAGAATTTCTCCGACCGGTTTGCTGCCGTGCCGACGCCTGTGAAGTCGTCGGGTGCGGCGGCGGTGAAGGGTTAG

Coding sequence (CDS)

ATGGGAGACCGTGACGGAGCTTTCAAAGAATTAGAATCAATCGGAGAAATCGACGGCGCCGATGCTCTTTTAGCCTCTAAACGCTATAGTTGTTTTTGCTTCCCTTGCTTCGGACCTCGCCGGTCGGCTTCCGATGAGCTTTCATGGTGGGAGCGGGTGAAGACGAAGGCAAAATCCACGAAGTTCGACGGTGAAGATCACTGGTGGACCGGCGGAATCAGATCCCTCAAAAAGCTTCGTGAATGGTCGGAGATCGTCGCCGGTCCGAGATGGAAAACTTTCATTCGTCGGTTCAACCGGAACCGTCCCGCCACTGTGAAGCTCGGGAAATTCCAATATGATCCTATCAGTTACGCTTTGAATTTCGACGAGGGACATAATGGTGATGTGGATTTCGAAGGGGATGAATACGGTGGTGGTGGGTTTCAGAATTTCTCCGACCGGTTTGCTGCCGTGCCGACGCCTGTGAAGTCGTCGGGTGCGGCGGCGGTGAAGGGTTAG

Protein sequence

MGDRDGAFKELESIGEIDGADALLASKRYSCFCFPCFGPRRSASDELSWWERVKTKAKSTKFDGEDHWWTGGIRSLKKLREWSEIVAGPRWKTFIRRFNRNRPATVKLGKFQYDPISYALNFDEGHNGDVDFEGDEYGGGGFQNFSDRFAAVPTPVKSSGAAAVKG

Homology

[Close]

BLAST of HG10020843 vs. NCBI nr
Match: XP_038894780.1 (uncharacterized protein LOC120083201 [Benincasa hispida])

HSP 1 Score: 342.8 bits (878), Expect = 1.6e-90
Identity = 160/166 (96.39%), Postives = 163/166 (98.19%), Query Frame = 0


Query: 1   MGDRDGAFKELESIGEIDGADALLASKRYSCFCFPCFGPRRSASDELSWWERVKTKAKST 60
           MGDRDGAFKELESIGEIDGADALLASKRYSCFCFPCFGPRRSASDE+SWWERVKTKAKST
Sbjct: 1   MGDRDGAFKELESIGEIDGADALLASKRYSCFCFPCFGPRRSASDEVSWWERVKTKAKST 60

Query: 61  KFDGEDHWWTGGIRSLKKLREWSEIVAGPRWKTFIRRFNRNRPATVKLGKFQYDPISYAL 120
           KFDGEDHWWTGGIRSLKKLREWSEIVAGPRWKTFIRRFNRNRPATVKLGKFQYDPISYAL
Sbjct: 61  KFDGEDHWWTGGIRSLKKLREWSEIVAGPRWKTFIRRFNRNRPATVKLGKFQYDPISYAL 120

Query: 121 NFDEGHNGDVDFEGDEYGGGGFQNFSDRFAAVPTPVKSSGAAAVKG 167
           NFD+GHNGDVDF+GDEY GGGFQNFSDRFAAVPTPVKSSGA AV G
Sbjct: 121 NFDDGHNGDVDFDGDEYSGGGFQNFSDRFAAVPTPVKSSGAPAVNG 166

[Close]

BLAST of HG10020843 vs. NCBI nr
Match: XP_023519821.1 (uncharacterized protein LOC111783153 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 311.6 bits (797), Expect = 4.0e-81
Identity = 147/162 (90.74%), Postives = 151/162 (93.21%), Query Frame = 0


Query: 1   MGDRDGAFKELESIGEIDGADALLASKRYSCFCFPCFGPRRSASDELSWWERVKTKAKST 60
           MGDRDG FKE+ESIGEIDGADALLAS+RYSCFCFPCFG  RSASDELSWWER K KAKST
Sbjct: 1   MGDRDGGFKEIESIGEIDGADALLASRRYSCFCFPCFGQSRSASDELSWWERAKAKAKST 60

Query: 61  KFDGEDHWWTGGIRSLKKLREWSEIVAGPRWKTFIRRFNRNRPATVKLGKFQYDPISYAL 120
           KFDGEDHWW+GGIRSLKKLREWSEIVAGPRWKTFIRRFNRNRPA VKLGKFQYDPISYAL
Sbjct: 61  KFDGEDHWWSGGIRSLKKLREWSEIVAGPRWKTFIRRFNRNRPAAVKLGKFQYDPISYAL 120

Query: 121 NFDEGHNGDVDFEGDEYGGGGFQNFSDRFAAVPTPVKSSGAA 163
           NFDEGHNGDVDFEGDEY  GGFQNFSDRF+AVP   KSSGAA
Sbjct: 121 NFDEGHNGDVDFEGDEY-SGGFQNFSDRFSAVPASGKSSGAA 161

[Close]

BLAST of HG10020843 vs. NCBI nr
Match: XP_023000665.1 (uncharacterized protein LOC111495035 [Cucurbita maxima])

HSP 1 Score: 310.8 bits (795), Expect = 6.9e-81
Identity = 146/162 (90.12%), Postives = 151/162 (93.21%), Query Frame = 0


Query: 1   MGDRDGAFKELESIGEIDGADALLASKRYSCFCFPCFGPRRSASDELSWWERVKTKAKST 60
           MGDRDG FKE+ESIGEIDGADALLAS+RYSCFCFPCFG  RSASDELSWWER K KAKST
Sbjct: 1   MGDRDGGFKEIESIGEIDGADALLASRRYSCFCFPCFGQSRSASDELSWWERAKAKAKST 60

Query: 61  KFDGEDHWWTGGIRSLKKLREWSEIVAGPRWKTFIRRFNRNRPATVKLGKFQYDPISYAL 120
           KFDGEDHWW+GGIRSLKKLREWSEIVAGPRWKTFIRRFNRNRPA VKLGKFQYDPISYAL
Sbjct: 61  KFDGEDHWWSGGIRSLKKLREWSEIVAGPRWKTFIRRFNRNRPAAVKLGKFQYDPISYAL 120

Query: 121 NFDEGHNGDVDFEGDEYGGGGFQNFSDRFAAVPTPVKSSGAA 163
           NFDEGHNGDV+FEGDEY  GGFQNFSDRF+AVP   KSSGAA
Sbjct: 121 NFDEGHNGDVNFEGDEY-SGGFQNFSDRFSAVPASAKSSGAA 161

[Close]

BLAST of HG10020843 vs. NCBI nr
Match: XP_022923865.1 (uncharacterized protein LOC111431456 [Cucurbita moschata])

HSP 1 Score: 310.1 bits (793), Expect = 1.2e-80
Identity = 146/162 (90.12%), Postives = 150/162 (92.59%), Query Frame = 0


Query: 1   MGDRDGAFKELESIGEIDGADALLASKRYSCFCFPCFGPRRSASDELSWWERVKTKAKST 60
           MGDRDG FKE+ESIGEIDGADALLAS+RY CFCFPCFG  RSASDELSWWER K KAKST
Sbjct: 1   MGDRDGGFKEIESIGEIDGADALLASRRYGCFCFPCFGQSRSASDELSWWERAKAKAKST 60

Query: 61  KFDGEDHWWTGGIRSLKKLREWSEIVAGPRWKTFIRRFNRNRPATVKLGKFQYDPISYAL 120
           KFDGEDHWW+GGIRSLKKLREWSEIVAGPRWKTFIRRFNRNRPA VKLGKFQYDPISYAL
Sbjct: 61  KFDGEDHWWSGGIRSLKKLREWSEIVAGPRWKTFIRRFNRNRPAAVKLGKFQYDPISYAL 120

Query: 121 NFDEGHNGDVDFEGDEYGGGGFQNFSDRFAAVPTPVKSSGAA 163
           NFDEGHNGDVDFEGDEY  GGFQNFSDRF+AVP   KSSGAA
Sbjct: 121 NFDEGHNGDVDFEGDEY-SGGFQNFSDRFSAVPASGKSSGAA 161

[Close]

BLAST of HG10020843 vs. NCBI nr
Match: XP_011660353.1 (uncharacterized protein LOC105436380 [Cucumis sativus] >KGN64297.1 hypothetical protein Csa_013957 [Cucumis sativus])

HSP 1 Score: 308.1 bits (788), Expect = 4.5e-80
Identity = 152/169 (89.94%), Postives = 155/169 (91.72%), Query Frame = 0


Query: 1   MGDRDGAFKELESIGEIDGADALLASKRYSCFCFPCFGPRRSASDELSWWERVKTKAKST 60
           MGDRDGAFKELES   IDGADALL SKRYSCFCFPCFGP RS SDELSWWERVKTKAKST
Sbjct: 1   MGDRDGAFKELES---IDGADALLTSKRYSCFCFPCFGPSRSGSDELSWWERVKTKAKST 60

Query: 61  KFDGED-HWWTGGIRSLKKLREWSEIVAGPRWKTFIRRFNRNRPATVKLGKFQYDPISYA 120
           KFD ED HWWTGGIRSLKKLREWSEIVAGPRWKTFIRRFNRNRPATVKLGKFQYDPISYA
Sbjct: 61  KFDSEDHHWWTGGIRSLKKLREWSEIVAGPRWKTFIRRFNRNRPATVKLGKFQYDPISYA 120

Query: 121 LNFDEGHNGDVDFEGDEYG-GGGFQNFSDRFAAV-PTPVKSSGAAAVKG 167
           LNFDEGHNGDVDF+GDEY  GGGFQNFSDRFAA+ P PVKSS +AAV G
Sbjct: 121 LNFDEGHNGDVDFDGDEYNTGGGFQNFSDRFAAIPPAPVKSSSSAAVNG 166

[Close]

BLAST of HG10020843 vs. ExPASy TrEMBL
Match: A0A6J1KJ01 (uncharacterized protein LOC111495035 OS=Cucurbita maxima OX=3661 GN=LOC111495035 PE=4 SV=1)

HSP 1 Score: 310.8 bits (795), Expect = 3.3e-81
Identity = 146/162 (90.12%), Postives = 151/162 (93.21%), Query Frame = 0


Query: 1   MGDRDGAFKELESIGEIDGADALLASKRYSCFCFPCFGPRRSASDELSWWERVKTKAKST 60
           MGDRDG FKE+ESIGEIDGADALLAS+RYSCFCFPCFG  RSASDELSWWER K KAKST
Sbjct: 1   MGDRDGGFKEIESIGEIDGADALLASRRYSCFCFPCFGQSRSASDELSWWERAKAKAKST 60

Query: 61  KFDGEDHWWTGGIRSLKKLREWSEIVAGPRWKTFIRRFNRNRPATVKLGKFQYDPISYAL 120
           KFDGEDHWW+GGIRSLKKLREWSEIVAGPRWKTFIRRFNRNRPA VKLGKFQYDPISYAL
Sbjct: 61  KFDGEDHWWSGGIRSLKKLREWSEIVAGPRWKTFIRRFNRNRPAAVKLGKFQYDPISYAL 120

Query: 121 NFDEGHNGDVDFEGDEYGGGGFQNFSDRFAAVPTPVKSSGAA 163
           NFDEGHNGDV+FEGDEY  GGFQNFSDRF+AVP   KSSGAA
Sbjct: 121 NFDEGHNGDVNFEGDEY-SGGFQNFSDRFSAVPASAKSSGAA 161

[Close]

BLAST of HG10020843 vs. ExPASy TrEMBL
Match: A0A6J1ED51 (uncharacterized protein LOC111431456 OS=Cucurbita moschata OX=3662 GN=LOC111431456 PE=4 SV=1)

HSP 1 Score: 310.1 bits (793), Expect = 5.7e-81
Identity = 146/162 (90.12%), Postives = 150/162 (92.59%), Query Frame = 0


Query: 1   MGDRDGAFKELESIGEIDGADALLASKRYSCFCFPCFGPRRSASDELSWWERVKTKAKST 60
           MGDRDG FKE+ESIGEIDGADALLAS+RY CFCFPCFG  RSASDELSWWER K KAKST
Sbjct: 1   MGDRDGGFKEIESIGEIDGADALLASRRYGCFCFPCFGQSRSASDELSWWERAKAKAKST 60

Query: 61  KFDGEDHWWTGGIRSLKKLREWSEIVAGPRWKTFIRRFNRNRPATVKLGKFQYDPISYAL 120
           KFDGEDHWW+GGIRSLKKLREWSEIVAGPRWKTFIRRFNRNRPA VKLGKFQYDPISYAL
Sbjct: 61  KFDGEDHWWSGGIRSLKKLREWSEIVAGPRWKTFIRRFNRNRPAAVKLGKFQYDPISYAL 120

Query: 121 NFDEGHNGDVDFEGDEYGGGGFQNFSDRFAAVPTPVKSSGAA 163
           NFDEGHNGDVDFEGDEY  GGFQNFSDRF+AVP   KSSGAA
Sbjct: 121 NFDEGHNGDVDFEGDEY-SGGFQNFSDRFSAVPASGKSSGAA 161

[Close]

BLAST of HG10020843 vs. ExPASy TrEMBL
Match: A0A0A0LU30 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G045950 PE=4 SV=1)

HSP 1 Score: 308.1 bits (788), Expect = 2.2e-80
Identity = 152/169 (89.94%), Postives = 155/169 (91.72%), Query Frame = 0


Query: 1   MGDRDGAFKELESIGEIDGADALLASKRYSCFCFPCFGPRRSASDELSWWERVKTKAKST 60
           MGDRDGAFKELES   IDGADALL SKRYSCFCFPCFGP RS SDELSWWERVKTKAKST
Sbjct: 1   MGDRDGAFKELES---IDGADALLTSKRYSCFCFPCFGPSRSGSDELSWWERVKTKAKST 60

Query: 61  KFDGED-HWWTGGIRSLKKLREWSEIVAGPRWKTFIRRFNRNRPATVKLGKFQYDPISYA 120
           KFD ED HWWTGGIRSLKKLREWSEIVAGPRWKTFIRRFNRNRPATVKLGKFQYDPISYA
Sbjct: 61  KFDSEDHHWWTGGIRSLKKLREWSEIVAGPRWKTFIRRFNRNRPATVKLGKFQYDPISYA 120

Query: 121 LNFDEGHNGDVDFEGDEYG-GGGFQNFSDRFAAV-PTPVKSSGAAAVKG 167
           LNFDEGHNGDVDF+GDEY  GGGFQNFSDRFAA+ P PVKSS +AAV G
Sbjct: 121 LNFDEGHNGDVDFDGDEYNTGGGFQNFSDRFAAIPPAPVKSSSSAAVNG 166

[Close]

BLAST of HG10020843 vs. ExPASy TrEMBL
Match: A0A5A7ULQ3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold80G00570 PE=4 SV=1)

HSP 1 Score: 305.8 bits (782), Expect = 1.1e-79
Identity = 153/170 (90.00%), Postives = 157/170 (92.35%), Query Frame = 0


Query: 1   MGDRDGAFKELESIGEIDGADALLASKRYSCFCFPCFGPRRSASDELSWWERVKTKAKST 60
           MGDRDGAFKELES   IDGADALLASKRYSCFCFPCFGP RS SDELSWWERVKTKAKST
Sbjct: 1   MGDRDGAFKELES---IDGADALLASKRYSCFCFPCFGPNRSGSDELSWWERVKTKAKST 60

Query: 61  KFDGEDHWWTGGIRSLKKLREWSEIVAGPRWKTFIRRFNRNRPATVKLGKFQYDPISYAL 120
           KFDGEDHWWTGGIRSLKKLREWSEIVAGPRWKTFIRRFNRNRPATVKLGKFQYDPISYAL
Sbjct: 61  KFDGEDHWWTGGIRSLKKLREWSEIVAGPRWKTFIRRFNRNRPATVKLGKFQYDPISYAL 120

Query: 121 NFDEGH-NGDVDFEGD-EY-GGGGFQNFSDRFAAV-PTPVKSSGAAAVKG 167
           NFDEGH NGDVDFEG+ EY GGGGFQNFSDRFAAV P P+KSS + A+ G
Sbjct: 121 NFDEGHNNGDVDFEGNHEYTGGGGFQNFSDRFAAVPPAPMKSSSSTAMNG 167

[Close]

BLAST of HG10020843 vs. ExPASy TrEMBL
Match: A0A5D3BLD0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G003520 PE=4 SV=1)

HSP 1 Score: 302.8 bits (774), Expect = 9.1e-79
Identity = 152/170 (89.41%), Postives = 156/170 (91.76%), Query Frame = 0


Query: 1   MGDRDGAFKELESIGEIDGADALLASKRYSCFCFPCFGPRRSASDELSWWERVKTKAKST 60
           MGDRDGAFKELES   IDGADALLASKRYSCFCFPCFGP RS SDELSWWERVKTKAKST
Sbjct: 1   MGDRDGAFKELES---IDGADALLASKRYSCFCFPCFGPNRSGSDELSWWERVKTKAKST 60

Query: 61  KFDGEDHWWTGGIRSLKKLREWSEIVAGPRWKTFIRRFNRNRPATVKLGKFQYDPISYAL 120
           KFDGEDHWWTG IRSLKKLREWSEIVAGPRWKTFIRRFNRNRPATVKLGKFQYDPISYAL
Sbjct: 61  KFDGEDHWWTGRIRSLKKLREWSEIVAGPRWKTFIRRFNRNRPATVKLGKFQYDPISYAL 120

Query: 121 NFDEGH-NGDVDFEGD-EY-GGGGFQNFSDRFAAV-PTPVKSSGAAAVKG 167
           NFDEGH NGDVDFEG+ EY GGGGFQNFSDRFAAV P P+KSS + A+ G
Sbjct: 121 NFDEGHNNGDVDFEGNHEYTGGGGFQNFSDRFAAVPPAPMKSSSSTAMNG 167

[Close]

BLAST of HG10020843 vs. TAIR 10
Match: AT5G62865.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G48020.1). )

HSP 1 Score: 106.3 bits (264), Expect = 2.4e-23
Identity = 71/143 (49.65%), Postives = 86/143 (60.14%), Query Frame = 0


Query: 31  CFCFPCFGPRRSASD-ELSWWERVKT---KAKSTKFDGEDHWWTGGIRSLKKLREWSEIV 90
           C CFP F   RS++    S W R++T      S     E  WW   IR+  K+REWSEIV
Sbjct: 20  CCCFPSFRRSRSSTAVGYSSWGRIRTVDDSNHSGDHGDEPRWW---IRASLKIREWSEIV 79

Query: 91  AGPRWKTFIRRFNRNRPATVK----LGKFQYDPISYALNFDEGHNGDVDFEGDEYGG-GG 150
           AGPRWKTFIRRFNR+ P   +      KFQYDP+SY+LNFD+      D E DEY G GG
Sbjct: 80  AGPRWKTFIRRFNRD-PRRGRDWDASEKFQYDPLSYSLNFDD------DDEEDEYVGLGG 139

Query: 151 FQNFSDRFAAVPTPVKSSGAAAV 165
            ++FS RFA+V  PV S  A A+
Sbjct: 140 LRSFSTRFASV--PVYSGKAPAI 150

[Close]

BLAST of HG10020843 vs. TAIR 10
Match: AT5G14890.1 (NHL domain-containing protein )

HSP 1 Score: 102.8 bits (255), Expect = 2.7e-22
Identity = 69/169 (40.83%), Postives = 92/169 (54.44%), Query Frame = 0


Query: 8   FKELES--IGEIDGADAL---LASKRYSCFCFPCFGPRRSASDELS-WWERVKTKAKSTK 67
           F  LES  I E+D  D +   + +KR  CF  PC G  + +    S WW+R++T     K
Sbjct: 583 FMGLESFPISEMDATDEMHEAMFAKRGCCFILPCLGSSQPSGPNGSVWWQRIRT---VDK 642

Query: 68  FDGEDHWWTGGIRSLKKLREWSEIVAGPRWKTFIRRFNR------------NRPATVKLG 127
            + ++ WW  G     K+REWSEIVAGP+WKTFIRRF R            NRP  V   
Sbjct: 643 LEPDERWWVSG---WMKMREWSEIVAGPKWKTFIRRFGRNHCCNGGIDGGCNRPEHV--- 702

Query: 128 KFQYDPISYALNFDEGHNGDVDFEGDEYGGGGFQNFSDRFAAVPTPVKS 159
            F+YD  SY+LNFD+G      FE DE+    ++++S RFAA   PV +
Sbjct: 703 SFRYDSWSYSLNFDDGKQTG-HFE-DEF---PYRDYSMRFAAPSLPVST 737

[Close]

BLAST of HG10020843 vs. TAIR 10
Match: AT3G01430.1 (BEST Arabidopsis thaliana protein match is: NHL domain-containing protein (TAIR:AT5G14890.1); Has 98 Blast hits to 98 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 98; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 99.0 bits (245), Expect = 3.8e-21
Identity = 62/172 (36.05%), Postives = 91/172 (52.91%), Query Frame = 0


Query: 14  IGEIDGADAL---LASKRYSCFCFPCFGPRRSASDELS-WWERVKTKAKSTKFDGEDHWW 73
           I E+D  D +   L +KR  CF  PC    + ++   S WW+R+ T     K + ++ WW
Sbjct: 8   IAEVDATDDMHEALFAKRGCCFLMPCLASSQPSTRGGSVWWQRITT---VDKLEPDERWW 67

Query: 74  TGGIRSLKKLREWSEIVAGPRWKTFIRRFNRNR----------------------PATVK 133
              IR  +++REWSE+VAGPRWKT+IRRF R+                         +  
Sbjct: 68  ---IRGWRRMREWSELVAGPRWKTYIRRFGRSNCCGGGGGRVGNSSGGCGGGAMPNRSSD 127

Query: 134 LGKFQYDPISYALNFDEGH-NGDVDFEGDEYGGGGFQNFSDRFAAVPTPVKS 159
            GKF+YD +SY+LNFD+G+  G  D   DE+    ++++S RFAA   PV +
Sbjct: 128 QGKFRYDQLSYSLNFDDGNQTGHFD---DEF---PYRDYSMRFAAPSLPVST 167

[Close]

BLAST of HG10020843 vs. TAIR 10
Match: AT3G48020.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G62865.1); Has 82 Blast hits to 82 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 82; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 94.4 bits (233), Expect = 9.5e-20
Identity = 54/123 (43.90%), Postives = 71/123 (57.72%), Query Frame = 0


Query: 42  SASDELSWWERVKTKAKSTKFDGEDHWWTGGIRSLKKLREWSEIVAGPRWKTFIRRFNRN 101
           S + + SWW+R+           E  WW   +R+  K+REWSEIVAGPRWKTFIRRFNR+
Sbjct: 17  STTVKSSWWQRIHRNNHQ-----EPRWW---VRAFLKIREWSEIVAGPRWKTFIRRFNRD 76

Query: 102 RPATV---KLGKFQYDPISYALNFDEGHNGDVDFEGDEYGGGGFQNFSDRFAAVPTPVKS 161
                      KF+YDP+SY L+F++    D     DE G GG ++FS R+A+VP     
Sbjct: 77  PRRGQDWDDSDKFRYDPVSYTLSFEDEDKDD----DDEAGVGGVRSFSMRYASVPVASGK 127

[Close]

BLAST of HG10020843 vs. TAIR 10
Match: AT5G25240.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 56.6 bits (135), Expect = 2.2e-08
Identity = 27/57 (47.37%), Postives = 36/57 (63.16%), Query Frame = 0


Query: 72  GIRSLKKLREWSEIVAGPRWKTFIRRFNRNRPATVKLGKFQYDPISYALNFDEGHNG 129
           G   LK L+E SE +AGP+WK FIR F+  R    +   F YD  +Y+LNFD+G +G
Sbjct: 59  GSEKLKGLKEISEKIAGPKWKNFIRSFSSGRKKMRRDVDFTYDLKNYSLNFDDGGDG 115

The following BLAST results are available for this feature:

BLAST of HG10020843 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038894780.1	1.6e-90	96.39	uncharacterized protein LOC120083201 [Benincasa hispida]	[more]
XP_023519821.1	4.0e-81	90.74	uncharacterized protein LOC111783153 [Cucurbita pepo subsp. pepo]	[more]
XP_023000665.1	6.9e-81	90.12	uncharacterized protein LOC111495035 [Cucurbita maxima]	[more]
XP_022923865.1	1.2e-80	90.12	uncharacterized protein LOC111431456 [Cucurbita moschata]	[more]
XP_011660353.1	4.5e-80	89.94	uncharacterized protein LOC105436380 [Cucumis sativus] >KGN64297.1 hypothetical ...	[more]

BLAST of HG10020843 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of HG10020843 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KJ01	3.3e-81	90.12	uncharacterized protein LOC111495035 OS=Cucurbita maxima OX=3661 GN=LOC111495035...	[more]
A0A6J1ED51	5.7e-81	90.12	uncharacterized protein LOC111431456 OS=Cucurbita moschata OX=3662 GN=LOC1114314...	[more]
A0A0A0LU30	2.2e-80	89.94	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G045950 PE=4 SV=1	[more]
A0A5A7ULQ3	1.1e-79	90.00	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5D3BLD0	9.1e-79	89.41	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]

BLAST of HG10020843 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G62865.1	2.4e-23	49.65	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT5G14890.1	2.7e-22	40.83	NHL domain-containing protein	[more]
AT3G01430.1	3.8e-21	36.05	BEST Arabidopsis thaliana protein match is: NHL domain-containing protein (TAIR:...	[more]
AT3G48020.1	9.5e-20	43.90	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT5G25240.1	2.2e-08	47.37	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR47076	NHL DOMAIN PROTEIN	coord: 8..159
None	No IPR available	PANTHER	PTHR47076:SF9	BNAA06G16930D PROTEIN	coord: 8..159

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10020843.1	HG10020843.1	mRNA