HG10020793 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10020793
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	RING-type domain-containing protein
Location	Chr05: 2480505 .. 2481194 (+)
RNA-Seq Expression	HG10020793
Synteny	HG10020793

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCCATCGCCGCCTCATCCTCCGTCACCTCCGGCCTCCACTGCGAGGTTTGGCAGCCCCAAGACTTCGCTGAAACTCCCTGCTCTTCTTCTTCTTCTTCTTCTTCTTCTCAATTTCAACCCCCTGAATTCTTCATCGATTTCTACGTCTCTTCTTACGCAACTCAAGGCGACGAAATCATCAGCACGCTTCGTTACAAGAATTTCCGGCAAAGATGTGATGTTCTAACTCAAGATTCCTTCTCTTGGTCTGCAATTTCCTCTATGCTTTCCGAAACCAATGTCCCTTATCATCTTCAACCCTTTTTCATTCACCAAATTTCCATTAGGGCTCGCGGAATTGCTACCGAACCCATTAACGCTCTCTCCCGCACCATTCCCATGGTCGTCGAGCTCATGCTCCCCGAGGAAGCCATGGAGGATTCCGGTTATGGGTCCGAAACCCACATGGGAATTGGGTCGGGTCGGGCCAGTAGGGCTTCGATTCAGGAAATGGAGAGAATTGAAATTGATGGGGTTTTAAGTGATTGTGTGATCTGTTTGGATGAGATTGATTCAATTGGGGATGAAATTGATGCAGTTCGAATGCCTTGTTTACATGTTTATCATCGAAATTGTATTCATAAATGGCTAGAACTCAGTAACCGTTGCCCTTTATGTCGGTTTCAGATGCCATTGGAAGAAGAATGA

mRNA sequence

ATGTCCATCGCCGCCTCATCCTCCGTCACCTCCGGCCTCCACTGCGAGGTTTGGCAGCCCCAAGACTTCGCTGAAACTCCCTGCTCTTCTTCTTCTTCTTCTTCTTCTTCTCAATTTCAACCCCCTGAATTCTTCATCGATTTCTACGTCTCTTCTTACGCAACTCAAGGCGACGAAATCATCAGCACGCTTCGTTACAAGAATTTCCGGCAAAGATGTGATGTTCTAACTCAAGATTCCTTCTCTTGGTCTGCAATTTCCTCTATGCTTTCCGAAACCAATGTCCCTTATCATCTTCAACCCTTTTTCATTCACCAAATTTCCATTAGGGCTCGCGGAATTGCTACCGAACCCATTAACGCTCTCTCCCGCACCATTCCCATGGTCGTCGAGCTCATGCTCCCCGAGGAAGCCATGGAGGATTCCGGTTATGGGTCCGAAACCCACATGGGAATTGGGTCGGGTCGGGCCAGTAGGGCTTCGATTCAGGAAATGGAGAGAATTGAAATTGATGGGGTTTTAAGTGATTGTGTGATCTGTTTGGATGAGATTGATTCAATTGGGGATGAAATTGATGCAGTTCGAATGCCTTGTTTACATGTTTATCATCGAAATTGTATTCATAAATGGCTAGAACTCAGTAACCGTTGCCCTTTATGTCGGTTTCAGATGCCATTGGAAGAAGAATGA

Coding sequence (CDS)

ATGTCCATCGCCGCCTCATCCTCCGTCACCTCCGGCCTCCACTGCGAGGTTTGGCAGCCCCAAGACTTCGCTGAAACTCCCTGCTCTTCTTCTTCTTCTTCTTCTTCTTCTCAATTTCAACCCCCTGAATTCTTCATCGATTTCTACGTCTCTTCTTACGCAACTCAAGGCGACGAAATCATCAGCACGCTTCGTTACAAGAATTTCCGGCAAAGATGTGATGTTCTAACTCAAGATTCCTTCTCTTGGTCTGCAATTTCCTCTATGCTTTCCGAAACCAATGTCCCTTATCATCTTCAACCCTTTTTCATTCACCAAATTTCCATTAGGGCTCGCGGAATTGCTACCGAACCCATTAACGCTCTCTCCCGCACCATTCCCATGGTCGTCGAGCTCATGCTCCCCGAGGAAGCCATGGAGGATTCCGGTTATGGGTCCGAAACCCACATGGGAATTGGGTCGGGTCGGGCCAGTAGGGCTTCGATTCAGGAAATGGAGAGAATTGAAATTGATGGGGTTTTAAGTGATTGTGTGATCTGTTTGGATGAGATTGATTCAATTGGGGATGAAATTGATGCAGTTCGAATGCCTTGTTTACATGTTTATCATCGAAATTGTATTCATAAATGGCTAGAACTCAGTAACCGTTGCCCTTTATGTCGGTTTCAGATGCCATTGGAAGAAGAATGA

Protein sequence

MSIAASSSVTSGLHCEVWQPQDFAETPCSSSSSSSSSQFQPPEFFIDFYVSSYATQGDEIISTLRYKNFRQRCDVLTQDSFSWSAISSMLSETNVPYHLQPFFIHQISIRARGIATEPINALSRTIPMVVELMLPEEAMEDSGYGSETHMGIGSGRASRASIQEMERIEIDGVLSDCVICLDEIDSIGDEIDAVRMPCLHVYHRNCIHKWLELSNRCPLCRFQMPLEEE

Homology

[Close]

BLAST of HG10020793 vs. NCBI nr
Match: XP_038895883.1 (E3 ubiquitin-protein ligase synoviolin A-like [Benincasa hispida])

HSP 1 Score: 418.7 bits (1075), Expect = 3.2e-113
Identity = 208/226 (92.04%), Postives = 215/226 (95.13%), Query Frame = 0


Query: 4   AASSSVTSGLHCEVWQPQDFAETPCSSSSSSSSSQFQPPEFFIDFYVSSYATQGDEIIST 63
           AA+++  SGLHCEVWQPQDF+ETP   SSSSSSSQ QPPEFFIDFYVSSYATQGDEIIST
Sbjct: 3   AAAANNNSGLHCEVWQPQDFSETP---SSSSSSSQSQPPEFFIDFYVSSYATQGDEIIST 62

Query: 64  LRYKNFRQRCDVLTQDSFSWSAISSMLSETNVPYHLQPFFIHQISIRARGIATEPINALS 123
           LRYKNFRQRCDVLTQDSFSWSAISSMLSETNVPYHLQPFFIHQISIRARGIATEPINALS
Sbjct: 63  LRYKNFRQRCDVLTQDSFSWSAISSMLSETNVPYHLQPFFIHQISIRARGIATEPINALS 122

Query: 124 RTIPMVVELMLPEEAMEDSGYGSETHMGIGSGRASRASIQEMERIEIDGVLSDCVICLDE 183
           RTIPMVVELMLPEEAMEDS YGS+THMGI SGRASRASIQ+MER+EIDGVLSDCVICLDE
Sbjct: 123 RTIPMVVELMLPEEAMEDSSYGSDTHMGIVSGRASRASIQDMERVEIDGVLSDCVICLDE 182

Query: 184 IDSIGDEIDAVRMPCLHVYHRNCIHKWLELSNRCPLCRFQMPLEEE 230
           I SIG EIDAVRMPCLHVYHRNCIHKWLE SNRCPLCRFQMPLEEE
Sbjct: 183 IVSIGYEIDAVRMPCLHVYHRNCIHKWLEFSNRCPLCRFQMPLEEE 225

[Close]

BLAST of HG10020793 vs. NCBI nr
Match: XP_008437461.1 (PREDICTED: uncharacterized protein LOC103482872 [Cucumis melo] >TYJ99097.1 E3 ubiquitin-protein ligase [Cucumis melo var. makuwa])

HSP 1 Score: 416.0 bits (1068), Expect = 2.1e-112
Identity = 205/225 (91.11%), Postives = 212/225 (94.22%), Query Frame = 0


Query: 5   ASSSVTSGLHCEVWQPQDFAETPCSSSSSSSSSQFQPPEFFIDFYVSSYATQGDEIISTL 64
           ++++  SGLHCEVWQPQDF+E  C   SSSSSSQFQPPEFFIDFYVSSYAT GDE+ISTL
Sbjct: 2   SAAAAISGLHCEVWQPQDFSEPSC---SSSSSSQFQPPEFFIDFYVSSYATHGDEVISTL 61

Query: 65  RYKNFRQRCDVLTQDSFSWSAISSMLSETNVPYHLQPFFIHQISIRARGIATEPINALSR 124
           RYKNFRQRCDVLTQDSFSWSAISSMLSETNVPYHLQPFFIHQISIRARGIATEPINALSR
Sbjct: 62  RYKNFRQRCDVLTQDSFSWSAISSMLSETNVPYHLQPFFIHQISIRARGIATEPINALSR 121

Query: 125 TIPMVVELMLPEEAMEDSGYGSETHMGIGSGRASRASIQEMERIEIDGVLSDCVICLDEI 184
           TIPMVVELMLPE+AME SGYGSE HMGIGSGRASRASIQEMERIEIDGVLSDCVICLDEI
Sbjct: 122 TIPMVVELMLPEDAMEGSGYGSEPHMGIGSGRASRASIQEMERIEIDGVLSDCVICLDEI 181

Query: 185 DSIGDEIDAVRMPCLHVYHRNCIHKWLELSNRCPLCRFQMPLEEE 230
            SIG EIDAVRMPCLHVYH NCIHKWLELSNRCPLCRFQMPLEEE
Sbjct: 182 GSIGCEIDAVRMPCLHVYHLNCIHKWLELSNRCPLCRFQMPLEEE 223

[Close]

BLAST of HG10020793 vs. NCBI nr
Match: XP_004152533.1 (uncharacterized protein LOC101217869 [Cucumis sativus] >KGN64248.1 hypothetical protein Csa_014260 [Cucumis sativus])

HSP 1 Score: 414.1 bits (1063), Expect = 8.0e-112
Identity = 204/224 (91.07%), Postives = 210/224 (93.75%), Query Frame = 0


Query: 6   SSSVTSGLHCEVWQPQDFAETPCSSSSSSSSSQFQPPEFFIDFYVSSYATQGDEIISTLR 65
           S+   SGLHCEVWQPQDF+E  C  SSSSSSSQFQPPEFFIDFYVSSYAT GDE+ISTLR
Sbjct: 2   STPAISGLHCEVWQPQDFSEPSC--SSSSSSSQFQPPEFFIDFYVSSYATHGDEVISTLR 61

Query: 66  YKNFRQRCDVLTQDSFSWSAISSMLSETNVPYHLQPFFIHQISIRARGIATEPINALSRT 125
           YKNFRQRCDVLTQDSFSWSAISSMLSETNVPYHLQPFFIHQIS RARGIATEPINALSRT
Sbjct: 62  YKNFRQRCDVLTQDSFSWSAISSMLSETNVPYHLQPFFIHQISTRARGIATEPINALSRT 121

Query: 126 IPMVVELMLPEEAMEDSGYGSETHMGIGSGRASRASIQEMERIEIDGVLSDCVICLDEID 185
           IPMVVEL+LPE+AMEDSGYGSE HMGIGSGRASRASIQEMERIEIDGVLSDCVICLDEI 
Sbjct: 122 IPMVVELILPEDAMEDSGYGSEPHMGIGSGRASRASIQEMERIEIDGVLSDCVICLDEIG 181

Query: 186 SIGDEIDAVRMPCLHVYHRNCIHKWLELSNRCPLCRFQMPLEEE 230
           SIG EID V+MPCLHVYH NCIHKWLELSNRCPLCRFQMPLEEE
Sbjct: 182 SIGCEIDVVQMPCLHVYHLNCIHKWLELSNRCPLCRFQMPLEEE 223

[Close]

BLAST of HG10020793 vs. NCBI nr
Match: KAG6584266.1 (E3 ubiquitin-protein ligase MPSR1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 397.5 bits (1020), Expect = 7.7e-107
Identity = 195/229 (85.15%), Postives = 211/229 (92.14%), Query Frame = 0


Query: 1   MSIAASSSVTSGLHCEVWQPQDFAETPCSSSSSSSSSQFQPPEFFIDFYVSSYATQGDEI 60
           MS AA+++  SGLHCEVWQPQDF+ET CS SSSSS S    PEFFIDFYVSSYATQGD+I
Sbjct: 1   MSTAAAAAAVSGLHCEVWQPQDFSETHCSFSSSSSES----PEFFIDFYVSSYATQGDQI 60

Query: 61  ISTLRYKNFRQRCDVLTQDSFSWSAISSMLSETNVPYHLQPFFIHQISIRARGIATEPIN 120
           ISTLRYKNFRQRCDVLTQDSFSWSAIS+MLSETNVPYHLQPFFI QISI ARGIATEP N
Sbjct: 61  ISTLRYKNFRQRCDVLTQDSFSWSAISTMLSETNVPYHLQPFFIQQISISARGIATEPTN 120

Query: 121 ALSRTIPMVVELMLPEEAMEDSGYGSETHMGIGSGRASRASIQEMERIEIDGVLSDCVIC 180
           ALSRTIPMVVEL+LPEEAMEDSGYGS+T MG GS RASRASIQEMER+E++GVLSDCVIC
Sbjct: 121 ALSRTIPMVVELVLPEEAMEDSGYGSDTIMGTGSRRASRASIQEMERVEMNGVLSDCVIC 180

Query: 181 LDEIDSIGDEIDAVRMPCLHVYHRNCIHKWLELSNRCPLCRFQMPLEEE 230
           LD+I S+G EIDA+RMPCLH+YHRNCIHKWL+LSNRCPLCRFQMPLEEE
Sbjct: 181 LDDIVSVGSEIDALRMPCLHIYHRNCIHKWLQLSNRCPLCRFQMPLEEE 225

[Close]

BLAST of HG10020793 vs. NCBI nr
Match: KAG7019862.1 (E3 ubiquitin-protein ligase SIRP1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 394.4 bits (1012), Expect = 6.5e-106
Identity = 193/229 (84.28%), Postives = 209/229 (91.27%), Query Frame = 0


Query: 1   MSIAASSSVTSGLHCEVWQPQDFAETPCSSSSSSSSSQFQPPEFFIDFYVSSYATQGDEI 60
           MS  A+++  SGLHCEVWQPQDF+ET CS SSSSS S    PEFFIDFYVSSYATQGD+I
Sbjct: 1   MSTVAAAAAVSGLHCEVWQPQDFSETHCSFSSSSSES----PEFFIDFYVSSYATQGDQI 60

Query: 61  ISTLRYKNFRQRCDVLTQDSFSWSAISSMLSETNVPYHLQPFFIHQISIRARGIATEPIN 120
           ISTLRYKNFRQRCDVLTQDSFSWSAIS+MLSETNVPYHLQPFFI QISI ARGIATEP N
Sbjct: 61  ISTLRYKNFRQRCDVLTQDSFSWSAISTMLSETNVPYHLQPFFIQQISISARGIATEPTN 120

Query: 121 ALSRTIPMVVELMLPEEAMEDSGYGSETHMGIGSGRASRASIQEMERIEIDGVLSDCVIC 180
           ALSRTIPMVVEL+LPEEAMEDSGYGS+T MG GS RASR SIQEMER+E++GVLSDCVIC
Sbjct: 121 ALSRTIPMVVELVLPEEAMEDSGYGSDTIMGTGSRRASRTSIQEMERVEMNGVLSDCVIC 180

Query: 181 LDEIDSIGDEIDAVRMPCLHVYHRNCIHKWLELSNRCPLCRFQMPLEEE 230
           LD+I S+G EIDA+RMPCLH+YHRNCIHKWL+LSNRCPLCRFQMPLEEE
Sbjct: 181 LDDIVSVGSEIDALRMPCLHIYHRNCIHKWLQLSNRCPLCRFQMPLEEE 225

[Close]

BLAST of HG10020793 vs. ExPASy Swiss-Prot
Match: Q9LQX2 (E3 ubiquitin-protein ligase MPSR1 OS=Arabidopsis thaliana OX=3702 GN=MPSR1 PE=1 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 2.6e-12
Identity = 35/75 (46.67%), Postives = 45/75 (60.00%), Query Frame = 0


Query: 153 GSGRASRASIQEMERIEIDGVLSDCVICLDEIDSIGDEIDAVRMPCLHVYHRNCIHKWLE 212
           G   AS+ASI  M  +EIDG   +CVICL+E  S   E     MPC H +H  CI KWL 
Sbjct: 89  GRPPASKASIDAMPIVEIDGCEGECVICLEEWKS---EETVKEMPCKHRFHGGCIEKWLG 148

Query: 213 LSNRCPLCRFQMPLE 228
               CP+CR++MP++
Sbjct: 149 FHGSCPVCRYEMPVD 160

[Close]

BLAST of HG10020793 vs. ExPASy Swiss-Prot
Match: Q8LPN7 (E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana OX=3702 GN=At3g19950 PE=1 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 8.3e-11
Identity = 28/81 (34.57%), Postives = 51/81 (62.96%), Query Frame = 0


Query: 153 GSGRASRASIQEMERIEI-----DGVLSDCVICLDEIDSIGDEIDAVRMPCLHVYHRNCI 212
           G+  AS+++I  +  +++        ++ C +C+DE +   D  D  +MPC HV+H++C+
Sbjct: 187 GTPPASKSAIDALPTVKVTKDMLKSEMNQCAVCMDEFE---DGSDVKQMPCKHVFHQDCL 246

Query: 213 HKWLELSNRCPLCRFQMPLEE 229
             WLEL N CP+CRF++P ++
Sbjct: 247 LPWLELHNSCPVCRFELPTDD 264

[Close]

BLAST of HG10020793 vs. ExPASy Swiss-Prot
Match: Q6AVN2 (E3 ubiquitin-protein ligase SIRP1 OS=Oryza sativa subsp. japonica OX=39947 GN=SIRP1 PE=1 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 1.4e-10
Identity = 30/76 (39.47%), Postives = 53/76 (69.74%), Query Frame = 0


Query: 153 GSGRASRASIQEMERIEIDGVLSDCVICLDEIDSIGDEIDAVRMPCLHVYHRNCIHKWLE 212
           G+  A + +++ +  ++I+ V+S C +CLD+++ +G +  A +MPC H +H +CI  WLE
Sbjct: 176 GTPPAKKEAVEALPTVKIEEVVS-CSVCLDDLE-VGSQ--AKQMPCEHKFHSSCILPWLE 235

Query: 213 LSNRCPLCRFQMPLEE 229
           L + CP+CRF++P EE
Sbjct: 236 LHSSCPVCRFELPSEE 247

[Close]

BLAST of HG10020793 vs. ExPASy Swiss-Prot
Match: Q940T5 (E3 ubiquitin-protein ligase RDUF2 OS=Arabidopsis thaliana OX=3702 GN=DURF2 PE=1 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 4.1e-10
Identity = 29/79 (36.71%), Postives = 50/79 (63.29%), Query Frame = 0


Query: 153 GSGRASRASIQEMERIEID----GVLSDCVICLDEIDSIGDEIDAVRMPCLHVYHRNCIH 212
           G+  AS+++I+ + R+EI     G  ++C +C +  ++   E +A  MPC H++H +CI 
Sbjct: 171 GNPPASKSAIESLPRVEISDCHIGSEANCAVCTEIFET---ETEAREMPCKHLFHDDCIV 230

Query: 213 KWLELSNRCPLCRFQMPLE 228
            WL + N CP+CRF++P E
Sbjct: 231 PWLSIRNSCPVCRFELPSE 246

[Close]

BLAST of HG10020793 vs. ExPASy Swiss-Prot
Match: P0CH30 (E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum OX=3635 GN=RING1 PE=1 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 1.2e-09
Identity = 26/81 (32.10%), Postives = 51/81 (62.96%), Query Frame = 0


Query: 153 GSGRASRASIQEMERIEI-----DGVLSDCVICLDEIDSIGDEIDAVRMPCLHVYHRNCI 212
           G+  AS+++I+ +  + I     +   + C +C+D+ +   +  +A +MPC H+YH++C+
Sbjct: 195 GTPPASKSAIEALPLVNITKSNLNSEFNQCAVCMDDFE---EGTEAKQMPCKHLYHKDCL 254

Query: 213 HKWLELSNRCPLCRFQMPLEE 229
             WLEL N CP+CR ++P ++
Sbjct: 255 LPWLELHNSCPVCRHELPTDD 272

[Close]

BLAST of HG10020793 vs. ExPASy TrEMBL
Match: A0A5D3BJ05 (E3 ubiquitin-protein ligase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G003020 PE=4 SV=1)

HSP 1 Score: 416.0 bits (1068), Expect = 1.0e-112
Identity = 205/225 (91.11%), Postives = 212/225 (94.22%), Query Frame = 0


Query: 5   ASSSVTSGLHCEVWQPQDFAETPCSSSSSSSSSQFQPPEFFIDFYVSSYATQGDEIISTL 64
           ++++  SGLHCEVWQPQDF+E  C   SSSSSSQFQPPEFFIDFYVSSYAT GDE+ISTL
Sbjct: 2   SAAAAISGLHCEVWQPQDFSEPSC---SSSSSSQFQPPEFFIDFYVSSYATHGDEVISTL 61

Query: 65  RYKNFRQRCDVLTQDSFSWSAISSMLSETNVPYHLQPFFIHQISIRARGIATEPINALSR 124
           RYKNFRQRCDVLTQDSFSWSAISSMLSETNVPYHLQPFFIHQISIRARGIATEPINALSR
Sbjct: 62  RYKNFRQRCDVLTQDSFSWSAISSMLSETNVPYHLQPFFIHQISIRARGIATEPINALSR 121

Query: 125 TIPMVVELMLPEEAMEDSGYGSETHMGIGSGRASRASIQEMERIEIDGVLSDCVICLDEI 184
           TIPMVVELMLPE+AME SGYGSE HMGIGSGRASRASIQEMERIEIDGVLSDCVICLDEI
Sbjct: 122 TIPMVVELMLPEDAMEGSGYGSEPHMGIGSGRASRASIQEMERIEIDGVLSDCVICLDEI 181

Query: 185 DSIGDEIDAVRMPCLHVYHRNCIHKWLELSNRCPLCRFQMPLEEE 230
            SIG EIDAVRMPCLHVYH NCIHKWLELSNRCPLCRFQMPLEEE
Sbjct: 182 GSIGCEIDAVRMPCLHVYHLNCIHKWLELSNRCPLCRFQMPLEEE 223

[Close]

BLAST of HG10020793 vs. ExPASy TrEMBL
Match: A0A1S3AU71 (uncharacterized protein LOC103482872 OS=Cucumis melo OX=3656 GN=LOC103482872 PE=4 SV=1)

HSP 1 Score: 416.0 bits (1068), Expect = 1.0e-112
Identity = 205/225 (91.11%), Postives = 212/225 (94.22%), Query Frame = 0


Query: 5   ASSSVTSGLHCEVWQPQDFAETPCSSSSSSSSSQFQPPEFFIDFYVSSYATQGDEIISTL 64
           ++++  SGLHCEVWQPQDF+E  C   SSSSSSQFQPPEFFIDFYVSSYAT GDE+ISTL
Sbjct: 2   SAAAAISGLHCEVWQPQDFSEPSC---SSSSSSQFQPPEFFIDFYVSSYATHGDEVISTL 61

Query: 65  RYKNFRQRCDVLTQDSFSWSAISSMLSETNVPYHLQPFFIHQISIRARGIATEPINALSR 124
           RYKNFRQRCDVLTQDSFSWSAISSMLSETNVPYHLQPFFIHQISIRARGIATEPINALSR
Sbjct: 62  RYKNFRQRCDVLTQDSFSWSAISSMLSETNVPYHLQPFFIHQISIRARGIATEPINALSR 121

Query: 125 TIPMVVELMLPEEAMEDSGYGSETHMGIGSGRASRASIQEMERIEIDGVLSDCVICLDEI 184
           TIPMVVELMLPE+AME SGYGSE HMGIGSGRASRASIQEMERIEIDGVLSDCVICLDEI
Sbjct: 122 TIPMVVELMLPEDAMEGSGYGSEPHMGIGSGRASRASIQEMERIEIDGVLSDCVICLDEI 181

Query: 185 DSIGDEIDAVRMPCLHVYHRNCIHKWLELSNRCPLCRFQMPLEEE 230
            SIG EIDAVRMPCLHVYH NCIHKWLELSNRCPLCRFQMPLEEE
Sbjct: 182 GSIGCEIDAVRMPCLHVYHLNCIHKWLELSNRCPLCRFQMPLEEE 223

[Close]

BLAST of HG10020793 vs. ExPASy TrEMBL
Match: A0A0A0LR28 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G045460 PE=4 SV=1)

HSP 1 Score: 414.1 bits (1063), Expect = 3.9e-112
Identity = 204/224 (91.07%), Postives = 210/224 (93.75%), Query Frame = 0


Query: 6   SSSVTSGLHCEVWQPQDFAETPCSSSSSSSSSQFQPPEFFIDFYVSSYATQGDEIISTLR 65
           S+   SGLHCEVWQPQDF+E  C  SSSSSSSQFQPPEFFIDFYVSSYAT GDE+ISTLR
Sbjct: 2   STPAISGLHCEVWQPQDFSEPSC--SSSSSSSQFQPPEFFIDFYVSSYATHGDEVISTLR 61

Query: 66  YKNFRQRCDVLTQDSFSWSAISSMLSETNVPYHLQPFFIHQISIRARGIATEPINALSRT 125
           YKNFRQRCDVLTQDSFSWSAISSMLSETNVPYHLQPFFIHQIS RARGIATEPINALSRT
Sbjct: 62  YKNFRQRCDVLTQDSFSWSAISSMLSETNVPYHLQPFFIHQISTRARGIATEPINALSRT 121

Query: 126 IPMVVELMLPEEAMEDSGYGSETHMGIGSGRASRASIQEMERIEIDGVLSDCVICLDEID 185
           IPMVVEL+LPE+AMEDSGYGSE HMGIGSGRASRASIQEMERIEIDGVLSDCVICLDEI 
Sbjct: 122 IPMVVELILPEDAMEDSGYGSEPHMGIGSGRASRASIQEMERIEIDGVLSDCVICLDEIG 181

Query: 186 SIGDEIDAVRMPCLHVYHRNCIHKWLELSNRCPLCRFQMPLEEE 230
           SIG EID V+MPCLHVYH NCIHKWLELSNRCPLCRFQMPLEEE
Sbjct: 182 SIGCEIDVVQMPCLHVYHLNCIHKWLELSNRCPLCRFQMPLEEE 223

[Close]

BLAST of HG10020793 vs. ExPASy TrEMBL
Match: A0A6J1KQS3 (uncharacterized protein LOC111495638 OS=Cucurbita maxima OX=3661 GN=LOC111495638 PE=4 SV=1)

HSP 1 Score: 393.7 bits (1010), Expect = 5.4e-106
Identity = 193/229 (84.28%), Postives = 209/229 (91.27%), Query Frame = 0


Query: 1   MSIAASSSVTSGLHCEVWQPQDFAETPCSSSSSSSSSQFQPPEFFIDFYVSSYATQGDEI 60
           MS AA+++  SGLHCEVWQPQDF+ET CS SSSSS S    PEFFIDFYVSSYATQGD+I
Sbjct: 1   MSTAAAAAAVSGLHCEVWQPQDFSETHCSFSSSSSES----PEFFIDFYVSSYATQGDQI 60

Query: 61  ISTLRYKNFRQRCDVLTQDSFSWSAISSMLSETNVPYHLQPFFIHQISIRARGIATEPIN 120
           ISTLRYKNFRQRCDVLTQDSFSWSAIS+MLSETNVPYHLQPFFI QISI ARGIATEP N
Sbjct: 61  ISTLRYKNFRQRCDVLTQDSFSWSAISTMLSETNVPYHLQPFFIQQISISARGIATEPTN 120

Query: 121 ALSRTIPMVVELMLPEEAMEDSGYGSETHMGIGSGRASRASIQEMERIEIDGVLSDCVIC 180
           ALSRTIPMVVEL+LPEEAMEDS YGS+T MG GS RASRASIQEMER+E++G LSDCVIC
Sbjct: 121 ALSRTIPMVVELVLPEEAMEDSSYGSDTIMGTGSRRASRASIQEMERVEMNGALSDCVIC 180

Query: 181 LDEIDSIGDEIDAVRMPCLHVYHRNCIHKWLELSNRCPLCRFQMPLEEE 230
           LD+I S+G EIDA+RMPCLH+YHRNCIHKWL+LSNRCPLCRFQMPLEEE
Sbjct: 181 LDDIVSVGSEIDALRMPCLHIYHRNCIHKWLQLSNRCPLCRFQMPLEEE 225

[Close]

BLAST of HG10020793 vs. ExPASy TrEMBL
Match: A0A6J1CAF5 (E3 ubiquitin-protein ligase CIP8-like OS=Momordica charantia OX=3673 GN=LOC111008905 PE=4 SV=1)

HSP 1 Score: 291.6 bits (745), Expect = 2.9e-75
Identity = 151/221 (68.33%), Postives = 173/221 (78.28%), Query Frame = 0


Query: 11  SGLHCEVWQPQDFAETPCSSSSSSSSSQFQPPEFFIDFYVSSYATQGDEIISTLRYKNFR 70
           +GLHCEVWQPQ++AE+ CSSSSS      +PPEFFID YVSSYA QG E IS+LRYKNFR
Sbjct: 4   AGLHCEVWQPQEWAESDCSSSSS------EPPEFFIDLYVSSYANQGGETISSLRYKNFR 63

Query: 71  QRCDVLTQDSFSWSAISSMLSETNVPYHLQPFFIHQISIRARGIATEPINALSRTIPMVV 130
           +R DV TQDS SWSAIS+MLSET+VPYHLQPFFI  IS+RAR IA +P NALSRTIP+VV
Sbjct: 64  RRRDVFTQDSLSWSAISTMLSETSVPYHLQPFFIQHISLRARRIAAQPTNALSRTIPIVV 123

Query: 131 ELMLPEEAMEDSGYGSETHMGIGSGRASRASIQEMERIEID-GVL-SDCVICLDEIDSIG 190
           EL+LP    E+SG GS+  +  G GRASRASI+EMER EI+ G+   DC ICLDEI    
Sbjct: 124 ELVLPLPEEEESGSGSDPRVPNGPGRASRASIEEMERAEIELGICGGDCAICLDEI---- 183

Query: 191 DEIDAVRMPCLHVYHRNCIHKWLELSNRCPLCRFQMPLEEE 230
            E  AV MPC H+YHRNCI KWL+ +N CPLCRFQMPLE E
Sbjct: 184 -ECGAVGMPCSHIYHRNCIVKWLQQNNLCPLCRFQMPLEME 213

[Close]

BLAST of HG10020793 vs. TAIR 10
Match: AT1G26800.1 (RING/U-box superfamily protein )

HSP 1 Score: 73.9 bits (180), Expect = 1.8e-13
Identity = 35/75 (46.67%), Postives = 45/75 (60.00%), Query Frame = 0


Query: 153 GSGRASRASIQEMERIEIDGVLSDCVICLDEIDSIGDEIDAVRMPCLHVYHRNCIHKWLE 212
           G   AS+ASI  M  +EIDG   +CVICL+E  S   E     MPC H +H  CI KWL 
Sbjct: 89  GRPPASKASIDAMPIVEIDGCEGECVICLEEWKS---EETVKEMPCKHRFHGGCIEKWLG 148

Query: 213 LSNRCPLCRFQMPLE 228
               CP+CR++MP++
Sbjct: 149 FHGSCPVCRYEMPVD 160

[Close]

BLAST of HG10020793 vs. TAIR 10
Match: AT3G19950.1 (RING/U-box superfamily protein )

HSP 1 Score: 68.9 bits (167), Expect = 5.9e-12
Identity = 28/81 (34.57%), Postives = 51/81 (62.96%), Query Frame = 0


Query: 153 GSGRASRASIQEMERIEI-----DGVLSDCVICLDEIDSIGDEIDAVRMPCLHVYHRNCI 212
           G+  AS+++I  +  +++        ++ C +C+DE +   D  D  +MPC HV+H++C+
Sbjct: 187 GTPPASKSAIDALPTVKVTKDMLKSEMNQCAVCMDEFE---DGSDVKQMPCKHVFHQDCL 246

Query: 213 HKWLELSNRCPLCRFQMPLEE 229
             WLEL N CP+CRF++P ++
Sbjct: 247 LPWLELHNSCPVCRFELPTDD 264

[Close]

BLAST of HG10020793 vs. TAIR 10
Match: AT5G59550.1 (zinc finger (C3HC4-type RING finger) family protein )

HSP 1 Score: 66.6 bits (161), Expect = 2.9e-11
Identity = 29/79 (36.71%), Postives = 50/79 (63.29%), Query Frame = 0


Query: 153 GSGRASRASIQEMERIEID----GVLSDCVICLDEIDSIGDEIDAVRMPCLHVYHRNCIH 212
           G+  AS+++I+ + R+EI     G  ++C +C +  ++   E +A  MPC H++H +CI 
Sbjct: 171 GNPPASKSAIESLPRVEISDCHIGSEANCAVCTEIFET---ETEAREMPCKHLFHDDCIV 230

Query: 213 KWLELSNRCPLCRFQMPLE 228
            WL + N CP+CRF++P E
Sbjct: 231 PWLSIRNSCPVCRFELPSE 246

[Close]

BLAST of HG10020793 vs. TAIR 10
Match: AT1G55530.1 (RING/U-box superfamily protein )

HSP 1 Score: 64.3 bits (155), Expect = 1.4e-10
Identity = 29/76 (38.16%), Postives = 49/76 (64.47%), Query Frame = 0


Query: 153 GSGRASRASIQEMERIEIDGVLSDCVICLDEIDSIGDEIDAVRMPCLHVYHRNCIHKWLE 212
           G+  A + +++ +  ++I+  L  C +CLD+ + IG E  A  MPC H +H +C+  WLE
Sbjct: 200 GTPPAKKEAVEALATVKIEETL-QCSVCLDDFE-IGTE--AKLMPCTHKFHSDCLLPWLE 259

Query: 213 LSNRCPLCRFQMPLEE 229
           L + CP+CR+Q+P +E
Sbjct: 260 LHSSCPVCRYQLPADE 271

[Close]

BLAST of HG10020793 vs. TAIR 10
Match: AT1G60360.1 (RING/U-box superfamily protein )

HSP 1 Score: 62.8 bits (151), Expect = 4.2e-10
Identity = 29/79 (36.71%), Postives = 44/79 (55.70%), Query Frame = 0


Query: 153 GSGRASRASIQEMERIEI-----DGVLSDCVICLDEIDSIGDEIDAVRMPCLHVYHRNCI 212
           G   AS  +I  +  ++I        +S C +C++E    G   DA  +PC H+YH++CI
Sbjct: 195 GPPPASEPTINSLPSVKITPQHLTNDMSQCTVCMEEFIVGG---DATELPCKHIYHKDCI 254

Query: 213 HKWLELSNRCPLCRFQMPL 227
             WL L+N CP+CR  +PL
Sbjct: 255 VPWLRLNNSCPICRRDLPL 270

The following BLAST results are available for this feature:

BLAST of HG10020793 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038895883.1	3.2e-113	92.04	E3 ubiquitin-protein ligase synoviolin A-like [Benincasa hispida]	[more]
XP_008437461.1	2.1e-112	91.11	PREDICTED: uncharacterized protein LOC103482872 [Cucumis melo] >TYJ99097.1 E3 ub...	[more]
XP_004152533.1	8.0e-112	91.07	uncharacterized protein LOC101217869 [Cucumis sativus] >KGN64248.1 hypothetical ...	[more]
KAG6584266.1	7.7e-107	85.15	E3 ubiquitin-protein ligase MPSR1, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAG7019862.1	6.5e-106	84.28	E3 ubiquitin-protein ligase SIRP1, partial [Cucurbita argyrosperma subsp. argyro...	[more]

BLAST of HG10020793 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LQX2	2.6e-12	46.67	E3 ubiquitin-protein ligase MPSR1 OS=Arabidopsis thaliana OX=3702 GN=MPSR1 PE=1 ...	[more]
Q8LPN7	8.3e-11	34.57	E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana OX=3702 GN=At3g19...	[more]
Q6AVN2	1.4e-10	39.47	E3 ubiquitin-protein ligase SIRP1 OS=Oryza sativa subsp. japonica OX=39947 GN=SI...	[more]
Q940T5	4.1e-10	36.71	E3 ubiquitin-protein ligase RDUF2 OS=Arabidopsis thaliana OX=3702 GN=DURF2 PE=1 ...	[more]
P0CH30	1.2e-09	32.10	E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum OX=3635 GN=RING1 PE=1 SV...	[more]

BLAST of HG10020793 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BJ05	1.0e-112	91.11	E3 ubiquitin-protein ligase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf...	[more]
A0A1S3AU71	1.0e-112	91.11	uncharacterized protein LOC103482872 OS=Cucumis melo OX=3656 GN=LOC103482872 PE=...	[more]
A0A0A0LR28	3.9e-112	91.07	RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G045460 P...	[more]
A0A6J1KQS3	5.4e-106	84.28	uncharacterized protein LOC111495638 OS=Cucurbita maxima OX=3661 GN=LOC111495638...	[more]
A0A6J1CAF5	2.9e-75	68.33	E3 ubiquitin-protein ligase CIP8-like OS=Momordica charantia OX=3673 GN=LOC11100...	[more]

BLAST of HG10020793 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G26800.1	1.8e-13	46.67	RING/U-box superfamily protein	[more]
AT3G19950.1	5.9e-12	34.57	RING/U-box superfamily protein	[more]
AT5G59550.1	2.9e-11	36.71	zinc finger (C3HC4-type RING finger) family protein	[more]
AT1G55530.1	1.4e-10	38.16	RING/U-box superfamily protein	[more]
AT1G60360.1	4.2e-10	36.71	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 177..220 e-value: 3.3E-8 score: 43.3
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 176..221 e-value: 2.8E-12 score: 46.8
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 177..221 score: 12.769585
IPR011016	Zinc finger, RING-CH-type	SMART	SM00744	ringv_2	coord: 176..221 e-value: 0.008 score: 8.0
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 146..226 e-value: 4.0E-17 score: 63.7
None	No IPR available	PANTHER	PTHR15710	E3 UBIQUITIN-PROTEIN LIGASE PRAJA	coord: 61..225
None	No IPR available	PANTHER	PTHR15710:SF138	FINGER PROTEIN, PUTATIVE-RELATED	coord: 61..225
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 176..225

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10020793.1	HG10020793.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016567	protein ubiquitination
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0061630	ubiquitin protein ligase activity
molecular_function	GO:0008270	zinc ion binding