HG10020771 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10020771
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	Coiled-coil domain-containing protein 12
Location	Chr05: 2303873 .. 2307825 (-)
RNA-Seq Expression	HG10020771
Synteny	HG10020771

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTAGTGAAGAAGACTCCGTCGAGCAAGTTGCTGCAGCACGTAAAGAGAGATTGAAAGCTCTAAGAGCTGCTCAGGAATTGTTAAGCACTTCAGATGAGAAGAATTCTGGAGGAGAGGATAAAGAGAATGGTGCTACTGCAGATACTGAAGAAACGTGAGTTTATATCTTCTTCTTCGCTATTGTTTCGGAAGTTATTTTTTCTCGCAGTTTTTCTATTCGATTTCTTGAATAAGTCTATCAATAATGATCACTTCACTTCTAAGCACATTCGTAACGTTCAGATAGGTTCAATTTGACTTCTGTGACTGCAATATCCTCTATTCTACTCTATTCTCATTTAATTTGTGTTTTTAAAGATCTATCCTATGGTATCCTCTCCAAATGTATGATCCTATACTATAATTGTACTCATAGATTAGAAGCTTAAAAAATAAGAAACATGAATGGATTTGAAAGAAACCATTGAGGAAGTTGCACAATAGTACATTAAGGCTATATCATTCTGTAGAATGATTTTAAATTCTCATATCTCCTAGAACTTGAGACTTCACTGGAAAAAAGAATATTCTATCGAAAGTAACACTATGAAGGAGATGATGAGGAGAAAAGAACAGATTTCATATTACTCTCCCGTCCTGGATGTTGTCTCCCTCTCCTCGGATTGGTGGTGTCCGTCTTCCTCTGCGGCTCTGCCTTAAACCACTCTCTTTTATCTCTGTGTTTGTTACCTGACCTATTTTCCTTCTCTTTTAACAATTTCTTTCTCATTCCCTTTCTCTTCCCATTCCTACAGCCATCCTTTTTGTATTTGTGTTTATCGTCTGACTGCTTTTCTCTCTTTTATTTTACGGTGGGAGTCCATGCTGAAATTACATACTTAGCATAGTGAGCCAAGTTCTTTGGAATCTGGCTTGTGACATGTTACAGACGACTACCTACTGCCTGCCATCGCCAGTGTGCTAAGCTCTCTAGAACTTGGTTTGTGGCATATTACAAATAAAAGCTTTGGCAATAGTATTTGCATTGTAGGGGCAGCACAAACAAAAAATGTCTTCCTCTGCTTGGTAAGCTGCATCTTTCTATTTGCAGACTAGAGTCTTGAACGGCCACAAACTCTCCAAATAGAACAGAAGACTAACCAAATATTTGATAAAATAGTATTAGAAACTAAGCTGTAAAGTTTATGTTAACCTGATGCATGTGAAGTATCCTCCCATTAATAAGATATTTGTTTCTTTTCTTTCTTTCTTTCCTTTTTTTTTTTGTATAATTCTTTCTTTCTGTCTTTCTTTTTCTTCTTTTTTTTACCTCAATTCCTTTCTAGTTTGTATTAACATTTGGGGTTGTAGGAGTTTGGGATGATGATGAGGTGGTGACAATGATGGCAATGCGACATACAACTTAACTGCTTATTTGTCTTTTGGGATATGTCTTCATGGTTACCTTCAAATGTGTTCCAATATATTTTCTCTTGCAGGGAGGAAAATGTGTTCCAATATAAATGACATCTCTTGTCCAATATATGTTTAGTTTGATGTCGTTCTCATTGACAACTCATTTGAAAAATTGATGTATACAATTACTATTTACTATGCATGTTATGTAGCTGTTCCCTCTAAGAGTGCAATATGCAGACAAACTCATTTTTTGTTGTTGAATGTTTATATGCCTCATTTGCCTCTTCAGTTCTTGATTCACTAATAAATTATCCTTTTGCAGTAATCTTAATATGAAATTTCGGAACTATGTTCCTCATGATAAGGAGCTTCAGGAGGGCAAGCTTGCCCCACCTGTATTGCCAAAGTTTGAGGACCCTGTTACTACTGAACCTCCACAATTAAAAGAGGTAGTTTTGTCAGTTCTGCTTTTATATGTTCTTAAACAGGCCTATGCTTGTACTTTTTGGATCTTTTTTTATTAATTGTATTCCATCGGTAAAACTATAGGACCCATTTGTGAATATTGCTCCAAAGAAACCGAACTGGGACCTTAGGAGGGATGTGCAGAAGAAGCTTGATAAGCTTGAAAGACGTACTCAGAAAGCATTATATAAGCTTATGGGTAAGTAGAAATATTGAATTAAACTTGATAAGTCATTATTTTATGCTTGTTCTTTTACTTGCGTCATTTGGTAGTGTAACTGGACTACGAATTGAATTTTATTTGCTTTGTTTGTCTGAGAGATATCTATCTCTAGTCAATTAGCATGTACATAATATCATTTTTGTTTGCTGGTTCTGTTTCAGGGTTCAATATTTTTGCTTTCACGTATTTAACTTACTAAAAATTTCCATGTACCACAGTCGCGTTCAAGTCAACCATGTGATGTAATGTTGGTTGCAATGTTTTTCTCACATTTTTCAACCAAGTCATTGCATATACGGATTAAAGAGCCATTGCATGAAATAAATATCCCTTAGGTGAGTTAATTTAATCCTGTAAGGATGAGTTAGAGTATTTGATCTGGTTGCAAAGTACAAGAATTTCCATTTTTTTCCTTTTAAATTTTAGAAACAAGAAACAACTCCTCATTGATATAATAAAAAGGGTCAAAGGTTTAGTGATAGAGAGAAAAAAGGAAAGATACACCCATAACATTATTTAGCCATGAATATAAGCATTCAAAGAACAAAAGAGCTTTTTTCATAATCTTTGCCTAAAAGACTTGAGCTTGCAAACAGAAGCTGTATCTATGAAAAGGCCTCCACGGCTCCACCAAAAACTGAAAACCGAAACCTGCTACAACCTTCCAAAGGAAATCGTCAACCGATCATCGACCTAGCGACTTAGAAAAGTGTACAAAAACAGTTGCAAATGTATTGCTTATAGAAAATACGGATGCAACAAGTCCAACAAGACCAATGAGAACATCCTCTAAGGAGAAAAAACCAAACTGATCCTATTACCATTATTGAGGCTCTCTTCTGACCGGTATAACTCTATCACGTCACCTTTAATTCCAAACCGGAATCCAATCTCAGAAGAATAATGTTCATCAATTTTCATTTTAACAAGTTCTGAATGGATGGAATTTCTTTGCAGTTCTTTTGACTTCAATCTCAGCATACCAAGGCTAAATAAGAACGATCACAACCCTTTGTTAACTTCCACTGAATTCCTTTTATTTATTTATTGTTACCTTATGATTATCAATGATTGGGAGGTGTTGATTTTGTAGGAGGGGGTTATCTCTACCCGGATTGTAAGCTGTTTGTGCCTCCTTTATTGTTTCTATAATACTTCTCAAGTTTCTCATTAAACAACTTTGAGCATTTGGTCATCAGTTGTGAATCTTATGATTTAACAGTCTTCAATCTTGAAATTTGAACTTGCTAGGCAGTAACAGTTTGTGCGATAGGGATTTTTTGGCATCGAAGGAAGTTGTGGAGCTTAGAGTAGTATAGGGTCGGTTTAAACCATAGCTTGTGATAAACTCGTGAAGATATGTTTATCCCAACAGAAAAAGAAAAAAAAAAAGGATGTACTCGTGAAGACATGGAATGTTAGAAAGGTTGTGATTCTTTTTACTAGACAGGTTGTTTAGTTATTCATTTATTTTAAAAGGACATTACATTACAAATATGAGGTGAGACTACGAACCTATGATCATTAAAAGGAATTATTGAACCTATGAAACTACAATCTTTACGAAGAATTAAGTATGTCTTATATTCAAGTTGATGTAGGTTACTCTTAATAGCTATTATGCATTGGAAGTTACAAAGTGATTATTATAGTTACAAGAGTGATTATTATGTAAATCATTAAAATGGTAGAAAATTATTTTGGAGCTCTGAAATTACAGAGTGGTTACACATTTAAAGCACCCATGCTTGCCTAGTTTCCTTTATGAACTCTACTCTTTACTTTCAATTTTGTGTAGAGGAACAGGAAAAGCAAAAGCAGTCAGCTGAAGGAGACGATGACCAAAATGGTGCAGAGGGATAG

mRNA sequence

ATGGCTAGTGAAGAAGACTCCGTCGAGCAAGTTGCTGCAGCACGTAAAGAGAGATTGAAAGCTCTAAGAGCTGCTCAGGAATTGTTAAGCACTTCAGATGAGAAGAATTCTGGAGGAGAGGATAAAGAGAATGGTGCTACTGCAGATACTGAAGAAACTAATCTTAATATGAAATTTCGGAACTATGTTCCTCATGATAAGGAGCTTCAGGAGGGCAAGCTTGCCCCACCTGTATTGCCAAAGTTTGAGGACCCTGTTACTACTGAACCTCCACAATTAAAAGAGGACCCATTTGTGAATATTGCTCCAAAGAAACCGAACTGGGACCTTAGGAGGGATGTGCAGAAGAAGCTTGATAAGCTTGAAAGACGTACTCAGAAAGCATTATATAAGCTTATGGAGGAACAGGAAAAGCAAAAGCAGTCAGCTGAAGGAGACGATGACCAAAATGGTGCAGAGGGATAG

Coding sequence (CDS)

ATGGCTAGTGAAGAAGACTCCGTCGAGCAAGTTGCTGCAGCACGTAAAGAGAGATTGAAAGCTCTAAGAGCTGCTCAGGAATTGTTAAGCACTTCAGATGAGAAGAATTCTGGAGGAGAGGATAAAGAGAATGGTGCTACTGCAGATACTGAAGAAACTAATCTTAATATGAAATTTCGGAACTATGTTCCTCATGATAAGGAGCTTCAGGAGGGCAAGCTTGCCCCACCTGTATTGCCAAAGTTTGAGGACCCTGTTACTACTGAACCTCCACAATTAAAAGAGGACCCATTTGTGAATATTGCTCCAAAGAAACCGAACTGGGACCTTAGGAGGGATGTGCAGAAGAAGCTTGATAAGCTTGAAAGACGTACTCAGAAAGCATTATATAAGCTTATGGAGGAACAGGAAAAGCAAAAGCAGTCAGCTGAAGGAGACGATGACCAAAATGGTGCAGAGGGATAG

Protein sequence

MASEEDSVEQVAAARKERLKALRAAQELLSTSDEKNSGGEDKENGATADTEETNLNMKFRNYVPHDKELQEGKLAPPVLPKFEDPVTTEPPQLKEDPFVNIAPKKPNWDLRRDVQKKLDKLERRTQKALYKLMEEQEKQKQSAEGDDDQNGAEG

Homology

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BLAST of HG10020771 vs. NCBI nr
Match: XP_038894163.1 (coiled-coil domain-containing protein 12 [Benincasa hispida])

HSP 1 Score: 278.1 bits (710), Expect = 4.6e-71
Identity = 148/154 (96.10%), Postives = 151/154 (98.05%), Query Frame = 0


Query: 1   MASEEDSVEQVAAARKERLKALRAAQELLSTSDEKNSGGEDKENGATADTEETNLNMKFR 60
           MA+EEDSVEQVAAARKERL+ALRAAQELL+ SDEKNSGGEDKENGATAD EETNLNMKFR
Sbjct: 1   MATEEDSVEQVAAARKERLRALRAAQELLNASDEKNSGGEDKENGATADAEETNLNMKFR 60

Query: 61  NYVPHDKELQEGKLAPPVLPKFEDPVTTEPPQLKEDPFVNIAPKKPNWDLRRDVQKKLDK 120
           NYVPHDKELQEGKLAPPVLPKFEDPVTTEP QLKEDPFVNIAPKKPNWDLRRDVQKKLDK
Sbjct: 61  NYVPHDKELQEGKLAPPVLPKFEDPVTTEPAQLKEDPFVNIAPKKPNWDLRRDVQKKLDK 120

Query: 121 LERRTQKALYKLMEEQEKQKQSAEGDDDQNGAEG 155
           LERRTQKALYKLMEEQEKQKQSAEGDDDQNGAEG
Sbjct: 121 LERRTQKALYKLMEEQEKQKQSAEGDDDQNGAEG 154

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BLAST of HG10020771 vs. NCBI nr
Match: XP_008437152.1 (PREDICTED: coiled-coil domain-containing protein 12 [Cucumis melo] >XP_008437160.1 PREDICTED: coiled-coil domain-containing protein 12 [Cucumis melo] >TYJ99079.1 coiled-coil domain-containing protein 12 [Cucumis melo var. makuwa])

HSP 1 Score: 272.3 bits (695), Expect = 2.5e-69
Identity = 145/153 (94.77%), Postives = 149/153 (97.39%), Query Frame = 0


Query: 1   MASEEDSVEQVAAARKERLKALRAAQELLSTSDEKNSGGEDKENGATADTEETNLNMKFR 60
           MA+EEDS EQVAAARKERLKALRAAQELL+ SDEKNS GEDKENGATADT+ETNLNMKFR
Sbjct: 1   MATEEDSFEQVAAARKERLKALRAAQELLNASDEKNSVGEDKENGATADTDETNLNMKFR 60

Query: 61  NYVPHDKELQEGKLAPPVLPKFEDPVTTEPPQLKEDPFVNIAPKKPNWDLRRDVQKKLDK 120
           NYVPHDKELQEGKLAPPVLPKFEDPVTTEPPQ KEDPFVNIAPKKPNWDLRRDVQKKLDK
Sbjct: 61  NYVPHDKELQEGKLAPPVLPKFEDPVTTEPPQQKEDPFVNIAPKKPNWDLRRDVQKKLDK 120

Query: 121 LERRTQKALYKLMEEQEKQKQSAEGDDDQNGAE 154
           LERRTQKALYKLMEEQEKQKQ+AEGDDDQNGAE
Sbjct: 121 LERRTQKALYKLMEEQEKQKQAAEGDDDQNGAE 153

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BLAST of HG10020771 vs. NCBI nr
Match: XP_004137537.1 (coiled-coil domain-containing protein 12 [Cucumis sativus] >XP_031743618.1 coiled-coil domain-containing protein 12 [Cucumis sativus] >KGN64229.2 hypothetical protein Csa_013562 [Cucumis sativus])

HSP 1 Score: 270.4 bits (690), Expect = 9.6e-69
Identity = 142/153 (92.81%), Postives = 151/153 (98.69%), Query Frame = 0


Query: 1   MASEEDSVEQVAAARKERLKALRAAQELLSTSDEKNSGGEDKENGATADTEETNLNMKFR 60
           MA+EEDSVEQVAAARKERLKALRAAQELL+ SDEKNSGGEDKENGAT D++ETNLNMKFR
Sbjct: 1   MATEEDSVEQVAAARKERLKALRAAQELLNNSDEKNSGGEDKENGATEDSDETNLNMKFR 60

Query: 61  NYVPHDKELQEGKLAPPVLPKFEDPVTTEPPQLKEDPFVNIAPKKPNWDLRRDVQKKLDK 120
           NYVPHDKELQEGKLAPPVLPKFEDPVT+EPPQLKEDPFVNIAPKKPNWDLRRDVQKKLDK
Sbjct: 61  NYVPHDKELQEGKLAPPVLPKFEDPVTSEPPQLKEDPFVNIAPKKPNWDLRRDVQKKLDK 120

Query: 121 LERRTQKALYKLMEEQEKQKQSAEGDDDQNGAE 154
           LERRTQKAL+KLMEEQEKQKQ+AEGD+D+NGAE
Sbjct: 121 LERRTQKALFKLMEEQEKQKQAAEGDNDENGAE 153

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BLAST of HG10020771 vs. NCBI nr
Match: XP_023542240.1 (coiled-coil domain-containing protein 12-like [Cucurbita pepo subsp. pepo] >XP_023542241.1 coiled-coil domain-containing protein 12-like [Cucurbita pepo subsp. pepo] >XP_023542242.1 coiled-coil domain-containing protein 12-like [Cucurbita pepo subsp. pepo] >XP_023542243.1 coiled-coil domain-containing protein 12-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 266.9 bits (681), Expect = 1.1e-67
Identity = 142/154 (92.21%), Postives = 146/154 (94.81%), Query Frame = 0


Query: 1   MASEEDSVEQVAAARKERLKALRAAQELLSTSDEKNSGGEDKENGATADTEETNLNMKFR 60
           MA+EEDSVEQVAAAR+ERL+ALRAAQELL+  DEK SGGEDKENGA ADTEETNL MKFR
Sbjct: 1   MATEEDSVEQVAAARQERLRALRAAQELLNAPDEKTSGGEDKENGAAADTEETNLGMKFR 60

Query: 61  NYVPHDKELQEGKLAPPVLPKFEDPVTTEPPQLKEDPFVNIAPKKPNWDLRRDVQKKLDK 120
           NYVPHDKELQEGKLAPPVLPKFEDPV TEPPQLKEDPFVNIAPKKPNWDLRRDVQKKLDK
Sbjct: 61  NYVPHDKELQEGKLAPPVLPKFEDPVATEPPQLKEDPFVNIAPKKPNWDLRRDVQKKLDK 120

Query: 121 LERRTQKALYKLMEEQEKQKQSAEGDDDQNGAEG 155
           LERRTQKALYKLMEEQEKQKQSAEGDDDQN  EG
Sbjct: 121 LERRTQKALYKLMEEQEKQKQSAEGDDDQNDTEG 154

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BLAST of HG10020771 vs. NCBI nr
Match: KAG6584286.1 (Coiled-coil domain-containing protein 12, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 266.9 bits (681), Expect = 1.1e-67
Identity = 142/153 (92.81%), Postives = 147/153 (96.08%), Query Frame = 0


Query: 1   MASEEDSVEQVAAARKERLKALRAAQELLSTSDEKNSGGEDKENGATADTEETNLNMKFR 60
           MA+E+DSVEQVAAARKERL+ALRAAQELL+TSDEKNSGGEDKENGAT D EETNL+MKFR
Sbjct: 1   MATEDDSVEQVAAARKERLRALRAAQELLNTSDEKNSGGEDKENGATEDPEETNLSMKFR 60

Query: 61  NYVPHDKELQEGKLAPPVLPKFEDPVTTEPPQLKEDPFVNIAPKKPNWDLRRDVQKKLDK 120
           NYVPHDKELQEGKL PPVLPKFEDPV TEPPQLKEDPFVNIAPKKPNWDLRRDVQKKLDK
Sbjct: 61  NYVPHDKELQEGKLVPPVLPKFEDPVATEPPQLKEDPFVNIAPKKPNWDLRRDVQKKLDK 120

Query: 121 LERRTQKALYKLMEEQEKQKQSAEGDDDQNGAE 154
           LERRTQKALYKLMEEQEKQKQSAEGDDDQN  E
Sbjct: 121 LERRTQKALYKLMEEQEKQKQSAEGDDDQNITE 153

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BLAST of HG10020771 vs. ExPASy Swiss-Prot
Match: Q8WUD4 (Coiled-coil domain-containing protein 12 OS=Homo sapiens OX=9606 GN=CCDC12 PE=1 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 8.6e-12
Identity = 51/142 (35.92%), Postives = 88/142 (61.97%), Query Frame = 0


Query: 8   VEQVAAARKERLKALRAAQELLSTSDEKNSGGEDKENGATADTEETNLNMKFRNYVPHDK 67
           +E+ A  RKERLKALR   E     D+++   + K      +  E +  ++ RNYVP D+
Sbjct: 11  LEEEALRRKERLKALR---EKTGRKDKEDGEPKTKHLREEEEEGEKHRELRLRNYVPEDE 70

Query: 68  ELQEGKL--APPVL--PKFEDPVTTEPPQ--LKEDPFVNIAPKKPNWDLRRDVQKKLDKL 127
           +L++ ++  A PV    K ++ +    P+  ++E    N+AP+KP+WDL+RDV KKL+KL
Sbjct: 71  DLKKRRVPQAKPVAVEEKVKEQLEAAKPEPVIEEVDLANLAPRKPDWDLKRDVAKKLEKL 130

Query: 128 ERRTQKALYKLMEEQEKQKQSA 144
           ++RTQ+A+ +L+ E+ K ++ +
Sbjct: 131 KKRTQRAIAELIRERLKGQEDS 149

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BLAST of HG10020771 vs. ExPASy Swiss-Prot
Match: Q8R344 (Coiled-coil domain-containing protein 12 OS=Mus musculus OX=10090 GN=Ccdc12 PE=1 SV=2)

HSP 1 Score: 71.2 bits (173), Expect = 1.1e-11
Identity = 51/142 (35.92%), Postives = 86/142 (60.56%), Query Frame = 0


Query: 8   VEQVAAARKERLKALRAAQELLSTSDEKNSGGEDKENGATADTEETNLNMKFRNYVPHDK 67
           +E+ A  RKERLKALR   E     D ++   + K+     +    +  ++ RNYVP D+
Sbjct: 11  LEEEALRRKERLKALR---EKTGRKDREDGEPQTKQLREEGEEVGKHRGLRLRNYVPEDE 70

Query: 68  ELQEGKL--APPVL--PKFEDPVTTEPPQ--LKEDPFVNIAPKKPNWDLRRDVQKKLDKL 127
           +L+  ++  A PV    K ++ +    P+  ++E    N+AP+KP+WDL+RDV KKL+KL
Sbjct: 71  DLKRRRVPQAKPVAVEEKVKEQLEAAKPEPVIEEVDLANLAPRKPDWDLKRDVAKKLEKL 130

Query: 128 ERRTQKALYKLMEEQEKQKQSA 144
           E+RTQ+A+ +L+ E+ K ++ +
Sbjct: 131 EKRTQRAIAELIRERLKGQEDS 149

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BLAST of HG10020771 vs. ExPASy TrEMBL
Match: A0A1S3ATB1 (coiled-coil domain-containing protein 12 OS=Cucumis melo OX=3656 GN=LOC103482658 PE=4 SV=1)

HSP 1 Score: 272.3 bits (695), Expect = 1.2e-69
Identity = 145/153 (94.77%), Postives = 149/153 (97.39%), Query Frame = 0


Query: 1   MASEEDSVEQVAAARKERLKALRAAQELLSTSDEKNSGGEDKENGATADTEETNLNMKFR 60
           MA+EEDS EQVAAARKERLKALRAAQELL+ SDEKNS GEDKENGATADT+ETNLNMKFR
Sbjct: 1   MATEEDSFEQVAAARKERLKALRAAQELLNASDEKNSVGEDKENGATADTDETNLNMKFR 60

Query: 61  NYVPHDKELQEGKLAPPVLPKFEDPVTTEPPQLKEDPFVNIAPKKPNWDLRRDVQKKLDK 120
           NYVPHDKELQEGKLAPPVLPKFEDPVTTEPPQ KEDPFVNIAPKKPNWDLRRDVQKKLDK
Sbjct: 61  NYVPHDKELQEGKLAPPVLPKFEDPVTTEPPQQKEDPFVNIAPKKPNWDLRRDVQKKLDK 120

Query: 121 LERRTQKALYKLMEEQEKQKQSAEGDDDQNGAE 154
           LERRTQKALYKLMEEQEKQKQ+AEGDDDQNGAE
Sbjct: 121 LERRTQKALYKLMEEQEKQKQAAEGDDDQNGAE 153

[Close]

BLAST of HG10020771 vs. ExPASy TrEMBL
Match: A0A5D3BJ95 (Coiled-coil domain-containing protein 12 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G002830 PE=4 SV=1)

HSP 1 Score: 272.3 bits (695), Expect = 1.2e-69
Identity = 145/153 (94.77%), Postives = 149/153 (97.39%), Query Frame = 0


Query: 1   MASEEDSVEQVAAARKERLKALRAAQELLSTSDEKNSGGEDKENGATADTEETNLNMKFR 60
           MA+EEDS EQVAAARKERLKALRAAQELL+ SDEKNS GEDKENGATADT+ETNLNMKFR
Sbjct: 1   MATEEDSFEQVAAARKERLKALRAAQELLNASDEKNSVGEDKENGATADTDETNLNMKFR 60

Query: 61  NYVPHDKELQEGKLAPPVLPKFEDPVTTEPPQLKEDPFVNIAPKKPNWDLRRDVQKKLDK 120
           NYVPHDKELQEGKLAPPVLPKFEDPVTTEPPQ KEDPFVNIAPKKPNWDLRRDVQKKLDK
Sbjct: 61  NYVPHDKELQEGKLAPPVLPKFEDPVTTEPPQQKEDPFVNIAPKKPNWDLRRDVQKKLDK 120

Query: 121 LERRTQKALYKLMEEQEKQKQSAEGDDDQNGAE 154
           LERRTQKALYKLMEEQEKQKQ+AEGDDDQNGAE
Sbjct: 121 LERRTQKALYKLMEEQEKQKQAAEGDDDQNGAE 153

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BLAST of HG10020771 vs. ExPASy TrEMBL
Match: A0A0A0LR08 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G043260 PE=4 SV=1)

HSP 1 Score: 270.4 bits (690), Expect = 4.6e-69
Identity = 142/153 (92.81%), Postives = 151/153 (98.69%), Query Frame = 0


Query: 1   MASEEDSVEQVAAARKERLKALRAAQELLSTSDEKNSGGEDKENGATADTEETNLNMKFR 60
           MA+EEDSVEQVAAARKERLKALRAAQELL+ SDEKNSGGEDKENGAT D++ETNLNMKFR
Sbjct: 42  MATEEDSVEQVAAARKERLKALRAAQELLNNSDEKNSGGEDKENGATEDSDETNLNMKFR 101

Query: 61  NYVPHDKELQEGKLAPPVLPKFEDPVTTEPPQLKEDPFVNIAPKKPNWDLRRDVQKKLDK 120
           NYVPHDKELQEGKLAPPVLPKFEDPVT+EPPQLKEDPFVNIAPKKPNWDLRRDVQKKLDK
Sbjct: 102 NYVPHDKELQEGKLAPPVLPKFEDPVTSEPPQLKEDPFVNIAPKKPNWDLRRDVQKKLDK 161

Query: 121 LERRTQKALYKLMEEQEKQKQSAEGDDDQNGAE 154
           LERRTQKAL+KLMEEQEKQKQ+AEGD+D+NGAE
Sbjct: 162 LERRTQKALFKLMEEQEKQKQAAEGDNDENGAE 194

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BLAST of HG10020771 vs. ExPASy TrEMBL
Match: A0A6J1JYP1 (coiled-coil domain-containing protein 12-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111490058 PE=4 SV=1)

HSP 1 Score: 265.0 bits (676), Expect = 2.0e-67
Identity = 140/154 (90.91%), Postives = 145/154 (94.16%), Query Frame = 0


Query: 1   MASEEDSVEQVAAARKERLKALRAAQELLSTSDEKNSGGEDKENGATADTEETNLNMKFR 60
           MA+EEDSVEQVAAAR+ERL+ALR AQELL+  DEK SGGED+ENG  ADTEETNL MKFR
Sbjct: 1   MATEEDSVEQVAAARQERLRALRTAQELLNAPDEKTSGGEDQENGTAADTEETNLGMKFR 60

Query: 61  NYVPHDKELQEGKLAPPVLPKFEDPVTTEPPQLKEDPFVNIAPKKPNWDLRRDVQKKLDK 120
           NYVPHDKELQEGKLAPPVLPKFEDPV TEPPQLKEDPFVNIAPKKPNWDLRRDVQKKLDK
Sbjct: 61  NYVPHDKELQEGKLAPPVLPKFEDPVATEPPQLKEDPFVNIAPKKPNWDLRRDVQKKLDK 120

Query: 121 LERRTQKALYKLMEEQEKQKQSAEGDDDQNGAEG 155
           LERRTQKALYKLMEEQEKQKQSAEGDDDQNG EG
Sbjct: 121 LERRTQKALYKLMEEQEKQKQSAEGDDDQNGTEG 154

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BLAST of HG10020771 vs. ExPASy TrEMBL
Match: A0A6J1GST8 (coiled-coil domain-containing protein 12-like OS=Cucurbita moschata OX=3662 GN=LOC111457177 PE=4 SV=1)

HSP 1 Score: 263.1 bits (671), Expect = 7.4e-67
Identity = 140/154 (90.91%), Postives = 145/154 (94.16%), Query Frame = 0


Query: 1   MASEEDSVEQVAAARKERLKALRAAQELLSTSDEKNSGGEDKENGATADTEETNLNMKFR 60
           MA+EEDSVEQVAAAR+ERL+ALRAAQELL+  DEK SGGED+ENGA ADTEE NL MKFR
Sbjct: 1   MATEEDSVEQVAAARQERLRALRAAQELLNAPDEKTSGGEDQENGAAADTEEINLGMKFR 60

Query: 61  NYVPHDKELQEGKLAPPVLPKFEDPVTTEPPQLKEDPFVNIAPKKPNWDLRRDVQKKLDK 120
           NYVPHDKELQEGKLAPPVLPKFEDPV TEPPQLKEDPFVNIAPKKPNWDLRRDVQKKLDK
Sbjct: 61  NYVPHDKELQEGKLAPPVLPKFEDPVATEPPQLKEDPFVNIAPKKPNWDLRRDVQKKLDK 120

Query: 121 LERRTQKALYKLMEEQEKQKQSAEGDDDQNGAEG 155
           LERRTQKALYKLMEEQEKQKQSAEGDDDQN  EG
Sbjct: 121 LERRTQKALYKLMEEQEKQKQSAEGDDDQNDTEG 154

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BLAST of HG10020771 vs. TAIR 10
Match: AT3G05070.1 (CONTAINS InterPro DOMAIN/s: mRNA splicing factor, Cwf18 (InterPro:IPR013169); Has 292 Blast hits to 292 proteins in 153 species: Archae - 0; Bacteria - 0; Metazoa - 118; Fungi - 83; Plants - 38; Viruses - 11; Other Eukaryotes - 42 (source: NCBI BLink). )

HSP 1 Score: 177.2 bits (448), Expect = 1.0e-44
Identity = 102/148 (68.92%), Postives = 114/148 (77.03%), Query Frame = 0


Query: 1   MASEEDSVEQVAAARKERLKALRAAQELLSTSDEKNSGGEDKENGATADTEETNLNMKFR 60
           MASE++S+EQ AAARKE LKALRAAQEL           E KE+G     EE    MKFR
Sbjct: 1   MASEDESIEQKAAARKEALKALRAAQEL----------SETKEDGEDEAVEEDGPAMKFR 60

Query: 61  NYVPHDKELQEGKLAPPVLPKFEDPVTTEPP--QLKEDPFVNIAPKKPNWDLRRDVQKKL 120
           NYVP  KELQ+GKLAPP LPKFEDP+   PP  + KEDPFVNIAPKKPNWDLRRDVQKKL
Sbjct: 61  NYVPQAKELQDGKLAPPELPKFEDPIVALPPAVEKKEDPFVNIAPKKPNWDLRRDVQKKL 120

Query: 121 DKLERRTQKALYKLMEEQEKQKQSAEGD 147
           DKLERRTQKA++KLMEEQEK+++ AE D
Sbjct: 121 DKLERRTQKAMHKLMEEQEKEREMAEAD 138

The following BLAST results are available for this feature:

BLAST of HG10020771 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038894163.1	4.6e-71	96.10	coiled-coil domain-containing protein 12 [Benincasa hispida]	[more]
XP_008437152.1	2.5e-69	94.77	PREDICTED: coiled-coil domain-containing protein 12 [Cucumis melo] >XP_008437160...	[more]
XP_004137537.1	9.6e-69	92.81	coiled-coil domain-containing protein 12 [Cucumis sativus] >XP_031743618.1 coile...	[more]
XP_023542240.1	1.1e-67	92.21	coiled-coil domain-containing protein 12-like [Cucurbita pepo subsp. pepo] >XP_0...	[more]
KAG6584286.1	1.1e-67	92.81	Coiled-coil domain-containing protein 12, partial [Cucurbita argyrosperma subsp....	[more]

BLAST of HG10020771 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8WUD4	8.6e-12	35.92	Coiled-coil domain-containing protein 12 OS=Homo sapiens OX=9606 GN=CCDC12 PE=1 ...	[more]
Q8R344	1.1e-11	35.92	Coiled-coil domain-containing protein 12 OS=Mus musculus OX=10090 GN=Ccdc12 PE=1...	[more]

BLAST of HG10020771 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3ATB1	1.2e-69	94.77	coiled-coil domain-containing protein 12 OS=Cucumis melo OX=3656 GN=LOC103482658...	[more]
A0A5D3BJ95	1.2e-69	94.77	Coiled-coil domain-containing protein 12 OS=Cucumis melo var. makuwa OX=1194695 ...	[more]
A0A0A0LR08	4.6e-69	92.81	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G043260 PE=4 SV=1	[more]
A0A6J1JYP1	2.0e-67	90.91	coiled-coil domain-containing protein 12-like isoform X1 OS=Cucurbita maxima OX=...	[more]
A0A6J1GST8	7.4e-67	90.91	coiled-coil domain-containing protein 12-like OS=Cucurbita moschata OX=3662 GN=L...	[more]

BLAST of HG10020771 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G05070.1	1.0e-44	68.92	CONTAINS InterPro DOMAIN/s: mRNA splicing factor, Cwf18 (InterPro:IPR013169); Ha...	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 111..146
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 24..55
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 74..100
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 129..154
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 34..48
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 129..147
IPR013169	mRNA splicing factor Cwf18-like	PFAM	PF08315	cwf18	coord: 8..135 e-value: 6.3E-35 score: 120.8
IPR013169	mRNA splicing factor Cwf18-like	PANTHER	PTHR31551	PRE-MRNA-SPLICING FACTOR CWF18	coord: 1..144

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10020771.1	HG10020771.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0071014	post-mRNA release spliceosomal complex
cellular_component	GO:0005684	U2-type spliceosomal complex