Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGGATAGCAAGATCAGACCTGTTCAATGATTATTGCCCTAAAAATCAAATCAAAGCGGCGACGTTGGATTACCAACTGTTCAATTATTCTTCAAATGATCTGAATCTGTCGGTGTGGTATGATTGTCCGCTGCTACAGGGAATCCCACGGGATTTCACATTTGAATGCGTATCGAAAGGGGACAGAAGTGGGAAAGCGAATTATGCTTTGGAGAAGAAGGATGCGATGAATTGGAGTAGAAACATGAGCGAGTGTACATTGAACATCGAAGTGACGATTACGATGGAGGTATTGAAAGAAGGAGAAAAGAACAGAACACTGGTGGTGGCAAAGGGAGTAAAAGAAGGGTTTGAAGTGGAGTACGGGGAGTTCTACGCCATAGCGTGCGAGGGATGCAAGGAATCTGGCGGCGCGTGTGGTCGAAACGCGTCTCAAGAGTTTCTGTGCATTTGTGGGAGTGGAGGAGATGTACATCCTTACGTTTGCAAAGGAGCCCCTCCTCCTGGTATATTTAATTTCTAG
mRNA sequence
ATGAGGATAGCAAGATCAGACCTGTTCAATGATTATTGCCCTAAAAATCAAATCAAAGCGGCGACGTTGGATTACCAACTGTTCAATTATTCTTCAAATGATCTGAATCTGTCGGTGTGGTATGATTGTCCGCTGCTACAGGGAATCCCACGGGATTTCACATTTGAATGCGTATCGAAAGGGGACAGAAGTGGGAAAGCGAATTATGCTTTGGAGAAGAAGGATGCGATGAATTGGAGTAGAAACATGAGCGAGTGTACATTGAACATCGAAGTGACGATTACGATGGAGGTATTGAAAGAAGGAGAAAAGAACAGAACACTGGTGGTGGCAAAGGGAGTAAAAGAAGGGTTTGAAGTGGAGTACGGGGAGTTCTACGCCATAGCGTGCGAGGGATGCAAGGAATCTGGCGGCGCGTGTGGTCGAAACGCGTCTCAAGAGTTTCTGTGCATTTGTGGGAGTGGAGGAGATGTACATCCTTACGTTTGCAAAGGAGCCCCTCCTCCTGGTATATTTAATTTCTAG
Coding sequence (CDS)
ATGAGGATAGCAAGATCAGACCTGTTCAATGATTATTGCCCTAAAAATCAAATCAAAGCGGCGACGTTGGATTACCAACTGTTCAATTATTCTTCAAATGATCTGAATCTGTCGGTGTGGTATGATTGTCCGCTGCTACAGGGAATCCCACGGGATTTCACATTTGAATGCGTATCGAAAGGGGACAGAAGTGGGAAAGCGAATTATGCTTTGGAGAAGAAGGATGCGATGAATTGGAGTAGAAACATGAGCGAGTGTACATTGAACATCGAAGTGACGATTACGATGGAGGTATTGAAAGAAGGAGAAAAGAACAGAACACTGGTGGTGGCAAAGGGAGTAAAAGAAGGGTTTGAAGTGGAGTACGGGGAGTTCTACGCCATAGCGTGCGAGGGATGCAAGGAATCTGGCGGCGCGTGTGGTCGAAACGCGTCTCAAGAGTTTCTGTGCATTTGTGGGAGTGGAGGAGATGTACATCCTTACGTTTGCAAAGGAGCCCCTCCTCCTGGTATATTTAATTTCTAG
Protein sequence
MRIARSDLFNDYCPKNQIKAATLDYQLFNYSSNDLNLSVWYDCPLLQGIPRDFTFECVSKGDRSGKANYALEKKDAMNWSRNMSECTLNIEVTITMEVLKEGEKNRTLVVAKGVKEGFEVEYGEFYAIACEGCKESGGACGRNASQEFLCICGSGGDVHPYVCKGAPPPGIFNF
Homology
BLAST of HG10020698 vs. NCBI nr
Match:
XP_038894042.1 (LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 2.1 isoform X2 [Benincasa hispida])
HSP 1 Score: 273.9 bits (699), Expect = 9.8e-70
Identity = 129/169 (76.33%), Postives = 143/169 (84.62%), Query Frame = 0
Query: 1 MRIARSDLFNDYCPKNQIKAATLDYQLFNYSSNDLNLSVWYDCPLLQGIPRDFTFECVSK 60
MRIARSDLF+DYCPKNQIK ATLD+ LF YSSN+LNL VWYDCP L+GIPRDF FEC +
Sbjct: 97 MRIARSDLFDDYCPKNQIKTATLDHNLFKYSSNNLNLYVWYDCPALEGIPRDFRFECGWE 156
Query: 61 GDRSGKANYALEKKDAMNWSRNMSECTLNIEVTITMEVLKEGEKNRTLVVAKGVKEGFEV 120
+ SG+ANYALEKKDAMNWSRNMS+C + IEV I +VLK GE NRT+VV GVKEGFEV
Sbjct: 157 EESSGRANYALEKKDAMNWSRNMSDCRMKIEVIIIKDVLKAGETNRTVVVENGVKEGFEV 216
Query: 121 EYGEFYAIACEGCKESGGACGRNASQEFLCICGSGGDVHPYVCKGAPPP 170
E G+ Y IACEGCKE GGAC NA+QEFLCICGS GDV+PYVCKGAPPP
Sbjct: 217 ENGDLYTIACEGCKEYGGACSGNATQEFLCICGS-GDVNPYVCKGAPPP 264
BLAST of HG10020698 vs. NCBI nr
Match:
XP_038894041.1 (LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 2.4 isoform X1 [Benincasa hispida])
HSP 1 Score: 273.9 bits (699), Expect = 9.8e-70
Identity = 129/169 (76.33%), Postives = 143/169 (84.62%), Query Frame = 0
Query: 1 MRIARSDLFNDYCPKNQIKAATLDYQLFNYSSNDLNLSVWYDCPLLQGIPRDFTFECVSK 60
MRIARSDLF+DYCPKNQIK ATLD+ LF YSSN+LNL VWYDCP L+GIPRDF FEC +
Sbjct: 97 MRIARSDLFDDYCPKNQIKTATLDHNLFKYSSNNLNLYVWYDCPALEGIPRDFRFECGWE 156
Query: 61 GDRSGKANYALEKKDAMNWSRNMSECTLNIEVTITMEVLKEGEKNRTLVVAKGVKEGFEV 120
+ SG+ANYALEKKDAMNWSRNMS+C + IEV I +VLK GE NRT+VV GVKEGFEV
Sbjct: 157 EESSGRANYALEKKDAMNWSRNMSDCRMKIEVIIIKDVLKAGETNRTVVVENGVKEGFEV 216
Query: 121 EYGEFYAIACEGCKESGGACGRNASQEFLCICGSGGDVHPYVCKGAPPP 170
E G+ Y IACEGCKE GGAC NA+QEFLCICGS GDV+PYVCKGAPPP
Sbjct: 217 ENGDLYTIACEGCKEYGGACSGNATQEFLCICGS-GDVNPYVCKGAPPP 264
BLAST of HG10020698 vs. NCBI nr
Match:
XP_011650606.2 (LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 2.4 isoform X1 [Cucumis sativus] >KGN64140.1 hypothetical protein Csa_014125 [Cucumis sativus])
HSP 1 Score: 260.0 bits (663), Expect = 1.5e-65
Identity = 122/174 (70.11%), Postives = 143/174 (82.18%), Query Frame = 0
Query: 1 MRIARSDLFNDYCPKNQIKAATLDYQLFNYSSNDLNLSVWYDCPLLQGIPRDFTFEC-VS 60
M IARSDL +DYCPK QIK ATL + LF YSSNDLNLS+WYDCP+L+GI R+ TFEC S
Sbjct: 94 MTIARSDLLDDYCPKIQIKTATLGHNLFKYSSNDLNLSLWYDCPVLEGIRREMTFECGSS 153
Query: 61 KGDRSGKANYALEKKDAMNWSRNMSECTLNIEVTITMEVLKEGEKNRTLVVAKGVKEGFE 120
+G+R G+ NYALEKKDAMNW RNMSEC + +EVTIT EVL EGEKNRT+VV +G+KEGFE
Sbjct: 154 EGERRGRVNYALEKKDAMNWRRNMSECRVKMEVTITKEVLTEGEKNRTMVVERGMKEGFE 213
Query: 121 VEYGEFYAIACEGCKESGGACGRNASQEFLCICGSGGDVHPYVCK----GAPPP 170
VEYG+ Y IACEGCKE GGACG N S+EF C+CG+ G+VHPY+CK +PPP
Sbjct: 214 VEYGDLYTIACEGCKEQGGACGGNTSKEFRCVCGN-GNVHPYICKSSSSSSPPP 266
BLAST of HG10020698 vs. NCBI nr
Match:
XP_031743234.1 (LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 2.4 isoform X2 [Cucumis sativus])
HSP 1 Score: 260.0 bits (663), Expect = 1.5e-65
Identity = 122/174 (70.11%), Postives = 143/174 (82.18%), Query Frame = 0
Query: 1 MRIARSDLFNDYCPKNQIKAATLDYQLFNYSSNDLNLSVWYDCPLLQGIPRDFTFEC-VS 60
M IARSDL +DYCPK QIK ATL + LF YSSNDLNLS+WYDCP+L+GI R+ TFEC S
Sbjct: 94 MTIARSDLLDDYCPKIQIKTATLGHNLFKYSSNDLNLSLWYDCPVLEGIRREMTFECGSS 153
Query: 61 KGDRSGKANYALEKKDAMNWSRNMSECTLNIEVTITMEVLKEGEKNRTLVVAKGVKEGFE 120
+G+R G+ NYALEKKDAMNW RNMSEC + +EVTIT EVL EGEKNRT+VV +G+KEGFE
Sbjct: 154 EGERRGRVNYALEKKDAMNWRRNMSECRVKMEVTITKEVLTEGEKNRTMVVERGMKEGFE 213
Query: 121 VEYGEFYAIACEGCKESGGACGRNASQEFLCICGSGGDVHPYVCK----GAPPP 170
VEYG+ Y IACEGCKE GGACG N S+EF C+CG+ G+VHPY+CK +PPP
Sbjct: 214 VEYGDLYTIACEGCKEQGGACGGNTSKEFRCVCGN-GNVHPYICKSSSSSSPPP 266
BLAST of HG10020698 vs. NCBI nr
Match:
XP_008459456.2 (PREDICTED: LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 2.4 [Cucumis melo] >TYJ99006.1 LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 2.4 [Cucumis melo var. makuwa])
HSP 1 Score: 257.3 bits (656), Expect = 9.5e-65
Identity = 117/170 (68.82%), Postives = 142/170 (83.53%), Query Frame = 0
Query: 1 MRIARSDLFNDYCPKNQIKAATLDYQLFNYSSNDLNLSVWYDCPLLQGIPRDFTFECVSK 60
M IARS+LF+DYCP N+I ATLD+ LF YSSNDLNLSVWYDCP+L GIP++F F+C S+
Sbjct: 94 MTIARSELFDDYCPNNEIGVATLDFSLFKYSSNDLNLSVWYDCPVLPGIPQNFEFKCGSE 153
Query: 61 GDRSGKANYALEKKDAMNWSRNMSECTLNIEVTITMEVLKEGEKNRTLVVAKGVKEGFEV 120
G+RSGKANYALE+ +AM+WS EC + IEVTI +EV +EG+ NRT+++ +G+KEGFEV
Sbjct: 154 GERSGKANYALEENEAMSWSAYTGECRIKIEVTIALEVFREGKMNRTMMMERGMKEGFEV 213
Query: 121 EYGEFYAIACEGCKESGGACGRNASQEFLCICGSGGDVHPYVCKGAPPPG 171
EYG+ Y IACEGCKE GGACGRNA++EFLCIC GDVHPYVCK PPPG
Sbjct: 214 EYGDLYTIACEGCKEYGGACGRNATKEFLCIC-RNGDVHPYVCK--PPPG 260
BLAST of HG10020698 vs. ExPASy TrEMBL
Match:
A0A0A0LQF0 (Protein kinase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G042510 PE=4 SV=1)
HSP 1 Score: 260.0 bits (663), Expect = 7.1e-66
Identity = 122/174 (70.11%), Postives = 143/174 (82.18%), Query Frame = 0
Query: 1 MRIARSDLFNDYCPKNQIKAATLDYQLFNYSSNDLNLSVWYDCPLLQGIPRDFTFEC-VS 60
M IARSDL +DYCPK QIK ATL + LF YSSNDLNLS+WYDCP+L+GI R+ TFEC S
Sbjct: 94 MTIARSDLLDDYCPKIQIKTATLGHNLFKYSSNDLNLSLWYDCPVLEGIRREMTFECGSS 153
Query: 61 KGDRSGKANYALEKKDAMNWSRNMSECTLNIEVTITMEVLKEGEKNRTLVVAKGVKEGFE 120
+G+R G+ NYALEKKDAMNW RNMSEC + +EVTIT EVL EGEKNRT+VV +G+KEGFE
Sbjct: 154 EGERRGRVNYALEKKDAMNWRRNMSECRVKMEVTITKEVLTEGEKNRTMVVERGMKEGFE 213
Query: 121 VEYGEFYAIACEGCKESGGACGRNASQEFLCICGSGGDVHPYVCK----GAPPP 170
VEYG+ Y IACEGCKE GGACG N S+EF C+CG+ G+VHPY+CK +PPP
Sbjct: 214 VEYGDLYTIACEGCKEQGGACGGNTSKEFRCVCGN-GNVHPYICKSSSSSSPPP 266
BLAST of HG10020698 vs. ExPASy TrEMBL
Match:
A0A5D3BIU5 (LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 2.4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G002100 PE=4 SV=1)
HSP 1 Score: 257.3 bits (656), Expect = 4.6e-65
Identity = 117/170 (68.82%), Postives = 142/170 (83.53%), Query Frame = 0
Query: 1 MRIARSDLFNDYCPKNQIKAATLDYQLFNYSSNDLNLSVWYDCPLLQGIPRDFTFECVSK 60
M IARS+LF+DYCP N+I ATLD+ LF YSSNDLNLSVWYDCP+L GIP++F F+C S+
Sbjct: 94 MTIARSELFDDYCPNNEIGVATLDFSLFKYSSNDLNLSVWYDCPVLPGIPQNFEFKCGSE 153
Query: 61 GDRSGKANYALEKKDAMNWSRNMSECTLNIEVTITMEVLKEGEKNRTLVVAKGVKEGFEV 120
G+RSGKANYALE+ +AM+WS EC + IEVTI +EV +EG+ NRT+++ +G+KEGFEV
Sbjct: 154 GERSGKANYALEENEAMSWSAYTGECRIKIEVTIALEVFREGKMNRTMMMERGMKEGFEV 213
Query: 121 EYGEFYAIACEGCKESGGACGRNASQEFLCICGSGGDVHPYVCKGAPPPG 171
EYG+ Y IACEGCKE GGACGRNA++EFLCIC GDVHPYVCK PPPG
Sbjct: 214 EYGDLYTIACEGCKEYGGACGRNATKEFLCIC-RNGDVHPYVCK--PPPG 260
BLAST of HG10020698 vs. ExPASy TrEMBL
Match:
A0A1S3CBF9 (LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 2.4 OS=Cucumis melo OX=3656 GN=LOC103498559 PE=4 SV=1)
HSP 1 Score: 257.3 bits (656), Expect = 4.6e-65
Identity = 117/170 (68.82%), Postives = 142/170 (83.53%), Query Frame = 0
Query: 1 MRIARSDLFNDYCPKNQIKAATLDYQLFNYSSNDLNLSVWYDCPLLQGIPRDFTFECVSK 60
M IARS+LF+DYCP N+I ATLD+ LF YSSNDLNLSVWYDCP+L GIP++F F+C S+
Sbjct: 94 MTIARSELFDDYCPNNEIGVATLDFSLFKYSSNDLNLSVWYDCPVLPGIPQNFEFKCGSE 153
Query: 61 GDRSGKANYALEKKDAMNWSRNMSECTLNIEVTITMEVLKEGEKNRTLVVAKGVKEGFEV 120
G+RSGKANYALE+ +AM+WS EC + IEVTI +EV +EG+ NRT+++ +G+KEGFEV
Sbjct: 154 GERSGKANYALEENEAMSWSAYTGECRIKIEVTIALEVFREGKMNRTMMMERGMKEGFEV 213
Query: 121 EYGEFYAIACEGCKESGGACGRNASQEFLCICGSGGDVHPYVCKGAPPPG 171
EYG+ Y IACEGCKE GGACGRNA++EFLCIC GDVHPYVCK PPPG
Sbjct: 214 EYGDLYTIACEGCKEYGGACGRNATKEFLCIC-RNGDVHPYVCK--PPPG 260
BLAST of HG10020698 vs. ExPASy TrEMBL
Match:
A0A5D3BJ24 (LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 1.2 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G002130 PE=4 SV=1)
HSP 1 Score: 253.4 bits (646), Expect = 6.6e-64
Identity = 117/175 (66.86%), Postives = 141/175 (80.57%), Query Frame = 0
Query: 1 MRIARSDLFNDYCPKNQIKAATLDYQLFNYSSNDLNLSVWYDCPLLQGIPRDFTFECVSK 60
M IARS+LF+DYCP N+I ATLD+ LF YSSNDLNLSVWYDCP+L GIP + FEC S+
Sbjct: 96 MTIARSELFDDYCPNNEIGVATLDFSLFKYSSNDLNLSVWYDCPMLPGIPPNLEFECGSE 155
Query: 61 GDRSGKANYALEKKDAMNWSRNMSECTLNIEVTITMEVLKEGEKNRTLVVAKGVKEGFEV 120
G+R+G+ANYAL + +AMNWS C + IEVTIT +V +EG NRT+VV +G+KEGFEV
Sbjct: 156 GERNGRANYALAENEAMNWSSYNGGCRIKIEVTITSKVWREGNTNRTIVVERGMKEGFEV 215
Query: 121 EYGEFYAIACEGCKESGGACGRNASQEFLCICGSGGDVHPYVCK--GAPPPGIFN 174
EYG+FY IACEGCKE GGACGRNA++EFLCIC S GD+HPYVCK PPG+F+
Sbjct: 216 EYGDFYTIACEGCKEFGGACGRNATKEFLCICKS-GDIHPYVCKPPSTTPPGMFS 269
BLAST of HG10020698 vs. ExPASy TrEMBL
Match:
A0A1S4DTL2 (LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 1.2 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103499532 PE=4 SV=1)
HSP 1 Score: 248.4 bits (633), Expect = 2.1e-62
Identity = 115/168 (68.45%), Postives = 137/168 (81.55%), Query Frame = 0
Query: 1 MRIARSDLFNDYCPKNQIKAATLDYQLFNYSSNDLNLSVWYDCPLLQGIPRDFTFECVSK 60
M IARS+LF+DYCP N+I ATLD+ LF YSSNDLNLSVWYDCP+L GIP + FEC S+
Sbjct: 96 MTIARSELFDDYCPNNEIGVATLDFSLFKYSSNDLNLSVWYDCPMLPGIPPNLEFECGSE 155
Query: 61 GDRSGKANYALEKKDAMNWSRNMSECTLNIEVTITMEVLKEGEKNRTLVVAKGVKEGFEV 120
G+R+G+ANYAL + +AMNWS C + IEVTIT +V +EG NRT+VV +G+KEGFEV
Sbjct: 156 GERNGRANYALAENEAMNWSSYNGGCRIKIEVTITSKVWREGNTNRTIVVERGMKEGFEV 215
Query: 121 EYGEFYAIACEGCKESGGACGRNASQEFLCICGSGGDVHPYVCKGAPP 169
EYG+FY IACEGCKE GGACGRNA++EFLCIC S GD+HPYVCK PP
Sbjct: 216 EYGDFYTIACEGCKEFGGACGRNATKEFLCICKS-GDIHPYVCK--PP 260
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| XP_038894042.1 | 9.8e-70 | 76.33 | LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 2.1 isof... | [more] |
| XP_038894041.1 | 9.8e-70 | 76.33 | LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 2.4 isof... | [more] |
| XP_011650606.2 | 1.5e-65 | 70.11 | LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 2.4 isof... | [more] |
| XP_031743234.1 | 1.5e-65 | 70.11 | LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 2.4 isof... | [more] |
| XP_008459456.2 | 9.5e-65 | 68.82 | PREDICTED: LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-li... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A0A0LQF0 | 7.1e-66 | 70.11 | Protein kinase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G042... | [more] |
| A0A5D3BIU5 | 4.6e-65 | 68.82 | LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 2.4 OS=C... | [more] |
| A0A1S3CBF9 | 4.6e-65 | 68.82 | LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 2.4 OS=C... | [more] |
| A0A5D3BJ24 | 6.6e-64 | 66.86 | LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 1.2 isof... | [more] |
| A0A1S4DTL2 | 2.1e-62 | 68.45 | LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 1.2 isof... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
