HG10020672 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10020672
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10-B
Location	Chr05: 1462262 .. 1462678 (-)
RNA-Seq Expression	HG10020672
Synteny	HG10020672

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGAGGAAGAAGACAGTGGAATTCGATGAATCTCCGCCGGATGATTTCGATCCGGAGCATCCGTATAAGGATCCAGTGGCGATGCTAGAGATGAGGGAACACATTGTCAGAGAGAAGTGGATCGCTATCGAAAAGGCGAAGATACTGAGGGAAAAGCTCAGATGGTGCTACCGTATTGAAGGAGTCAACCATCTGCAGAAATGCCGTCACCTCGTTCAACAATACCTTGATTCCACTCGTGGCATCGGCTGGGGCAAGGACGGCCGCCACCCATCCCTTCATGGTTGTTCTCTCTTTTCATCTCTCATTCTGTTTAATTTCCGAGCAATTTTAGCATTTTTTTTGCAATTGTTTTGCCTTTTTGGTAGAAAATGGAGATATTTTGAGGTACTGATAGTAGGTCGTGATTGGTAA

mRNA sequence

ATGGGGAGGAAGAAGACAGTGGAATTCGATGAATCTCCGCCGGATGATTTCGATCCGGAGCATCCGTATAAGGATCCAGTGGCGATGCTAGAGATGAGGGAACACATTGTCAGAGAGAAGTGGATCGCTATCGAAAAGGCGAAGATACTGAGGGAAAAGCTCAGATGGTGCTACCGTATTGAAGGAGTCAACCATCTGCAGAAATGCCGTCACCTCGTTCAACAATACCTTGATTCCACTCGTGGCATCGGCTGGGGCAAGGACGGCCGCCACCCATCCCTTCATGGTTGTTCTCTCTTTTCATCTCTCATTCTGTTTAATTTCCGAGCAATTTTAGCATTTTTTTTGCAATTGTTTTGCCTTTTTGGTAGAAAATGGAGATATTTTGAGGTACTGATAGTAGGTCGTGATTGGTAA

Coding sequence (CDS)

ATGGGGAGGAAGAAGACAGTGGAATTCGATGAATCTCCGCCGGATGATTTCGATCCGGAGCATCCGTATAAGGATCCAGTGGCGATGCTAGAGATGAGGGAACACATTGTCAGAGAGAAGTGGATCGCTATCGAAAAGGCGAAGATACTGAGGGAAAAGCTCAGATGGTGCTACCGTATTGAAGGAGTCAACCATCTGCAGAAATGCCGTCACCTCGTTCAACAATACCTTGATTCCACTCGTGGCATCGGCTGGGGCAAGGACGGCCGCCACCCATCCCTTCATGGTTGTTCTCTCTTTTCATCTCTCATTCTGTTTAATTTCCGAGCAATTTTAGCATTTTTTTTGCAATTGTTTTGCCTTTTTGGTAGAAAATGGAGATATTTTGAGGTACTGATAGTAGGTCGTGATTGGTAA

Protein sequence

MGRKKTVEFDESPPDDFDPEHPYKDPVAMLEMREHIVREKWIAIEKAKILREKLRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHGCSLFSSLILFNFRAILAFFLQLFCLFGRKWRYFEVLIVGRDW

Homology

[Close]

BLAST of HG10020672 vs. NCBI nr
Match: XP_022924082.1 (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10-B [Cucurbita moschata] >XP_023001015.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10-B [Cucurbita maxima] >XP_023519758.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10-B [Cucurbita pepo subsp. pepo] >XP_023519759.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10-B [Cucurbita pepo subsp. pepo] >KAG7019947.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10-B [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 207.6 bits (527), Expect = 6.8e-50
Identity = 95/96 (98.96%), Postives = 95/96 (98.96%), Query Frame = 0


Query: 1  MGRKKTVEFDESPPDDFDPEHPYKDPVAMLEMREHIVREKWIAIEKAKILREKLRWCYRI 60
          MGRKKTVEFDESPPDDFDPEHPYKDPVAMLEMREHIVREKWI IEKAKILREKLRWCYRI
Sbjct: 1  MGRKKTVEFDESPPDDFDPEHPYKDPVAMLEMREHIVREKWIEIEKAKILREKLRWCYRI 60

Query: 61 EGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHG 97
          EGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHG
Sbjct: 61 EGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHG 96

[Close]

BLAST of HG10020672 vs. NCBI nr
Match: XP_038894613.1 (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10-B [Benincasa hispida] >XP_038894614.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10-B [Benincasa hispida] >XP_038894615.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10-B [Benincasa hispida])

HSP 1 Score: 207.2 bits (526), Expect = 8.9e-50
Identity = 95/96 (98.96%), Postives = 95/96 (98.96%), Query Frame = 0


Query: 1  MGRKKTVEFDESPPDDFDPEHPYKDPVAMLEMREHIVREKWIAIEKAKILREKLRWCYRI 60
          MGRKKTVEFDESPPDDFDPEHPYKDPVAMLEMREHIVREKWI IEKAKILREKLRWCYRI
Sbjct: 1  MGRKKTVEFDESPPDDFDPEHPYKDPVAMLEMREHIVREKWIDIEKAKILREKLRWCYRI 60

Query: 61 EGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHG 97
          EGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHG
Sbjct: 61 EGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHG 96

[Close]

BLAST of HG10020672 vs. NCBI nr
Match: XP_022954577.1 (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10-B-like [Cucurbita moschata] >XP_022954578.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10-B-like [Cucurbita moschata] >XP_022954579.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10-B-like [Cucurbita moschata] >KAG7012120.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10-B, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 204.5 bits (519), Expect = 5.8e-49
Identity = 94/96 (97.92%), Postives = 94/96 (97.92%), Query Frame = 0


Query: 1  MGRKKTVEFDESPPDDFDPEHPYKDPVAMLEMREHIVREKWIAIEKAKILREKLRWCYRI 60
          MGRKKTVEFDESPPDDFD EHPYKDPVAMLEMREHIVREKWI IEKAKILREKLRWCYRI
Sbjct: 1  MGRKKTVEFDESPPDDFDAEHPYKDPVAMLEMREHIVREKWIEIEKAKILREKLRWCYRI 60

Query: 61 EGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHG 97
          EGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHG
Sbjct: 61 EGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHG 96

[Close]

BLAST of HG10020672 vs. NCBI nr
Match: XP_022994087.1 (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10-B-like [Cucurbita maxima] >XP_022994089.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10-B-like [Cucurbita maxima] >XP_022994090.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10-B-like [Cucurbita maxima] >XP_022994091.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10-B-like [Cucurbita maxima] >XP_022994092.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10-B-like [Cucurbita maxima])

HSP 1 Score: 204.1 bits (518), Expect = 7.6e-49
Identity = 94/96 (97.92%), Postives = 94/96 (97.92%), Query Frame = 0


Query: 1  MGRKKTVEFDESPPDDFDPEHPYKDPVAMLEMREHIVREKWIAIEKAKILREKLRWCYRI 60
          MGRKKTVEFDESPPDDFD EHPYKDPVAMLEMREHIVREKWI IEKAKILREKLRWCYRI
Sbjct: 1  MGRKKTVEFDESPPDDFDAEHPYKDPVAMLEMREHIVREKWIDIEKAKILREKLRWCYRI 60

Query: 61 EGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHG 97
          EGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHG
Sbjct: 61 EGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHG 96

[Close]

BLAST of HG10020672 vs. NCBI nr
Match: XP_004137473.1 (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10-B [Cucumis sativus] >XP_004137474.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10-B [Cucumis sativus] >XP_008457988.1 PREDICTED: NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10-B [Cucumis melo] >KGN64119.1 hypothetical protein Csa_013648 [Cucumis sativus])

HSP 1 Score: 202.2 bits (513), Expect = 2.9e-48
Identity = 93/96 (96.88%), Postives = 95/96 (98.96%), Query Frame = 0


Query: 1  MGRKKTVEFDESPPDDFDPEHPYKDPVAMLEMREHIVREKWIAIEKAKILREKLRWCYRI 60
          MGRKKTVEFDESPPDDFDPE+PYKDPVAMLEMRE+IVREKWI IEKAKILREKLRWCYRI
Sbjct: 1  MGRKKTVEFDESPPDDFDPENPYKDPVAMLEMREYIVREKWIDIEKAKILREKLRWCYRI 60

Query: 61 EGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHG 97
          EGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHG
Sbjct: 61 EGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHG 96

[Close]

BLAST of HG10020672 vs. ExPASy Swiss-Prot
Match: Q94C12 (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10-B OS=Arabidopsis thaliana OX=3702 GN=At3g18410 PE=3 SV=1)

HSP 1 Score: 172.2 bits (435), Expect = 4.2e-42
Identity = 80/97 (82.47%), Postives = 88/97 (90.72%), Query Frame = 0


Query: 1  MGRKKTV-EFDESPPDDFDPEHPYKDPVAMLEMREHIVREKWIAIEKAKILREKLRWCYR 60
          MGRKK + EF+ES PD FDPE+PYKDPVAM+EMREHIVREKWI IEKAKILREK++WCYR
Sbjct: 1  MGRKKGLPEFEESAPDGFDPENPYKDPVAMVEMREHIVREKWIQIEKAKILREKVKWCYR 60

Query: 61 IEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHG 97
          +EGVNH QKCRHLVQQYLDSTRG+GWGKD R  SLHG
Sbjct: 61 VEGVNHYQKCRHLVQQYLDSTRGVGWGKDHRPISLHG 97

[Close]

BLAST of HG10020672 vs. ExPASy Swiss-Prot
Match: Q9M9B4 (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10-A OS=Arabidopsis thaliana OX=3702 GN=At1g49140 PE=1 SV=1)

HSP 1 Score: 170.6 bits (431), Expect = 1.2e-41
Identity = 79/97 (81.44%), Postives = 88/97 (90.72%), Query Frame = 0


Query: 1  MGRKKTV-EFDESPPDDFDPEHPYKDPVAMLEMREHIVREKWIAIEKAKILREKLRWCYR 60
          MGRKK + EF+ES PD FDPE+PYKDPVAM+EMREHIVREKWI IEKAKILREK++WCYR
Sbjct: 1  MGRKKGLPEFEESAPDGFDPENPYKDPVAMVEMREHIVREKWIHIEKAKILREKVKWCYR 60

Query: 61 IEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHG 97
          +EGVNH QKCRHLVQQYLD+TRG+GWGKD R  SLHG
Sbjct: 61 VEGVNHYQKCRHLVQQYLDATRGVGWGKDHRPISLHG 97

[Close]

BLAST of HG10020672 vs. ExPASy Swiss-Prot
Match: Q03015 (NADH-ubiquinone oxidoreductase 12 kDa subunit, mitochondrial OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) OX=367110 GN=nuo-12.3 PE=3 SV=2)

HSP 1 Score: 57.4 bits (137), Expect = 1.5e-07
Identity = 23/55 (41.82%), Postives = 38/55 (69.09%), Query Frame = 0


Query: 23 YKDPVAMLEMREHIVREKWIAIEKAKILREKLRWCYRIEGVNHLQKCRHLVQQYL 78
          Y D   + + ++ I+RE+W+ +   +++RE+L  CY  EGVNHL+KC HL ++YL
Sbjct: 25 YNDTKRLKQAQDAIIREQWVRVMMGRLVREELSKCYYREGVNHLEKCGHLRERYL 79

[Close]

BLAST of HG10020672 vs. ExPASy Swiss-Prot
Match: P80267 (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10 (Fragment) OS=Solanum tuberosum OX=4113 PE=1 SV=1)

HSP 1 Score: 45.1 bits (105), Expect = 7.7e-04
Identity = 20/29 (68.97%), Postives = 22/29 (75.86%), Query Frame = 0


Query: 2  GRKKTVEFDESPPDDFDPEHPYKDPVAML 31
          GRKK V+FDE  PDDFDP +PYK  VA L
Sbjct: 1  GRKKGVQFDEGAPDDFDPNNPYKKDVAFL 29

[Close]

BLAST of HG10020672 vs. ExPASy TrEMBL
Match: A0A6J1KJX6 (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10-B OS=Cucurbita maxima OX=3661 GN=LOC111495279 PE=4 SV=1)

HSP 1 Score: 207.6 bits (527), Expect = 3.3e-50
Identity = 95/96 (98.96%), Postives = 95/96 (98.96%), Query Frame = 0


Query: 1  MGRKKTVEFDESPPDDFDPEHPYKDPVAMLEMREHIVREKWIAIEKAKILREKLRWCYRI 60
          MGRKKTVEFDESPPDDFDPEHPYKDPVAMLEMREHIVREKWI IEKAKILREKLRWCYRI
Sbjct: 1  MGRKKTVEFDESPPDDFDPEHPYKDPVAMLEMREHIVREKWIEIEKAKILREKLRWCYRI 60

Query: 61 EGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHG 97
          EGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHG
Sbjct: 61 EGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHG 96

[Close]

BLAST of HG10020672 vs. ExPASy TrEMBL
Match: A0A6J1E7Z3 (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10-B OS=Cucurbita moschata OX=3662 GN=LOC111431621 PE=4 SV=1)

HSP 1 Score: 207.6 bits (527), Expect = 3.3e-50
Identity = 95/96 (98.96%), Postives = 95/96 (98.96%), Query Frame = 0


Query: 1  MGRKKTVEFDESPPDDFDPEHPYKDPVAMLEMREHIVREKWIAIEKAKILREKLRWCYRI 60
          MGRKKTVEFDESPPDDFDPEHPYKDPVAMLEMREHIVREKWI IEKAKILREKLRWCYRI
Sbjct: 1  MGRKKTVEFDESPPDDFDPEHPYKDPVAMLEMREHIVREKWIEIEKAKILREKLRWCYRI 60

Query: 61 EGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHG 97
          EGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHG
Sbjct: 61 EGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHG 96

[Close]

BLAST of HG10020672 vs. ExPASy TrEMBL
Match: A0A6J1GRC0 (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10-B-like OS=Cucurbita moschata OX=3662 GN=LOC111456807 PE=3 SV=1)

HSP 1 Score: 204.5 bits (519), Expect = 2.8e-49
Identity = 94/96 (97.92%), Postives = 94/96 (97.92%), Query Frame = 0


Query: 1  MGRKKTVEFDESPPDDFDPEHPYKDPVAMLEMREHIVREKWIAIEKAKILREKLRWCYRI 60
          MGRKKTVEFDESPPDDFD EHPYKDPVAMLEMREHIVREKWI IEKAKILREKLRWCYRI
Sbjct: 1  MGRKKTVEFDESPPDDFDAEHPYKDPVAMLEMREHIVREKWIEIEKAKILREKLRWCYRI 60

Query: 61 EGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHG 97
          EGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHG
Sbjct: 61 EGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHG 96

[Close]

BLAST of HG10020672 vs. ExPASy TrEMBL
Match: A0A6J1JUQ8 (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10-B-like OS=Cucurbita maxima OX=3661 GN=LOC111489918 PE=3 SV=1)

HSP 1 Score: 204.1 bits (518), Expect = 3.7e-49
Identity = 94/96 (97.92%), Postives = 94/96 (97.92%), Query Frame = 0


Query: 1  MGRKKTVEFDESPPDDFDPEHPYKDPVAMLEMREHIVREKWIAIEKAKILREKLRWCYRI 60
          MGRKKTVEFDESPPDDFD EHPYKDPVAMLEMREHIVREKWI IEKAKILREKLRWCYRI
Sbjct: 1  MGRKKTVEFDESPPDDFDAEHPYKDPVAMLEMREHIVREKWIDIEKAKILREKLRWCYRI 60

Query: 61 EGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHG 97
          EGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHG
Sbjct: 61 EGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHG 96

[Close]

BLAST of HG10020672 vs. ExPASy TrEMBL
Match: A0A0A0LSZ4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G042310 PE=3 SV=1)

HSP 1 Score: 202.2 bits (513), Expect = 1.4e-48
Identity = 93/96 (96.88%), Postives = 95/96 (98.96%), Query Frame = 0


Query: 1  MGRKKTVEFDESPPDDFDPEHPYKDPVAMLEMREHIVREKWIAIEKAKILREKLRWCYRI 60
          MGRKKTVEFDESPPDDFDPE+PYKDPVAMLEMRE+IVREKWI IEKAKILREKLRWCYRI
Sbjct: 1  MGRKKTVEFDESPPDDFDPENPYKDPVAMLEMREYIVREKWIDIEKAKILREKLRWCYRI 60

Query: 61 EGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHG 97
          EGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHG
Sbjct: 61 EGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHG 96

[Close]

BLAST of HG10020672 vs. TAIR 10
Match: AT3G18410.1 (Complex I subunit NDUFS6 )

HSP 1 Score: 172.2 bits (435), Expect = 3.0e-43
Identity = 80/97 (82.47%), Postives = 88/97 (90.72%), Query Frame = 0


Query: 1  MGRKKTV-EFDESPPDDFDPEHPYKDPVAMLEMREHIVREKWIAIEKAKILREKLRWCYR 60
          MGRKK + EF+ES PD FDPE+PYKDPVAM+EMREHIVREKWI IEKAKILREK++WCYR
Sbjct: 1  MGRKKGLPEFEESAPDGFDPENPYKDPVAMVEMREHIVREKWIQIEKAKILREKVKWCYR 60

Query: 61 IEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHG 97
          +EGVNH QKCRHLVQQYLDSTRG+GWGKD R  SLHG
Sbjct: 61 VEGVNHYQKCRHLVQQYLDSTRGVGWGKDHRPISLHG 97

[Close]

BLAST of HG10020672 vs. TAIR 10
Match: AT3G18410.2 (Complex I subunit NDUFS6 )

HSP 1 Score: 172.2 bits (435), Expect = 3.0e-43
Identity = 80/97 (82.47%), Postives = 88/97 (90.72%), Query Frame = 0


Query: 1  MGRKKTV-EFDESPPDDFDPEHPYKDPVAMLEMREHIVREKWIAIEKAKILREKLRWCYR 60
          MGRKK + EF+ES PD FDPE+PYKDPVAM+EMREHIVREKWI IEKAKILREK++WCYR
Sbjct: 1  MGRKKGLPEFEESAPDGFDPENPYKDPVAMVEMREHIVREKWIQIEKAKILREKVKWCYR 60

Query: 61 IEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHG 97
          +EGVNH QKCRHLVQQYLDSTRG+GWGKD R  SLHG
Sbjct: 61 VEGVNHYQKCRHLVQQYLDSTRGVGWGKDHRPISLHG 97

[Close]

BLAST of HG10020672 vs. TAIR 10
Match: AT1G49140.1 (Complex I subunit NDUFS6 )

HSP 1 Score: 170.6 bits (431), Expect = 8.6e-43
Identity = 79/97 (81.44%), Postives = 88/97 (90.72%), Query Frame = 0


Query: 1  MGRKKTV-EFDESPPDDFDPEHPYKDPVAMLEMREHIVREKWIAIEKAKILREKLRWCYR 60
          MGRKK + EF+ES PD FDPE+PYKDPVAM+EMREHIVREKWI IEKAKILREK++WCYR
Sbjct: 1  MGRKKGLPEFEESAPDGFDPENPYKDPVAMVEMREHIVREKWIHIEKAKILREKVKWCYR 60

Query: 61 IEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHG 97
          +EGVNH QKCRHLVQQYLD+TRG+GWGKD R  SLHG
Sbjct: 61 VEGVNHYQKCRHLVQQYLDATRGVGWGKDHRPISLHG 97

The following BLAST results are available for this feature:

BLAST of HG10020672 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022924082.1	6.8e-50	98.96	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10-B [Cucurbita moscha...	[more]
XP_038894613.1	8.9e-50	98.96	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10-B [Benincasa hispid...	[more]
XP_022954577.1	5.8e-49	97.92	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10-B-like [Cucurbita m...	[more]
XP_022994087.1	7.6e-49	97.92	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10-B-like [Cucurbita m...	[more]
XP_004137473.1	2.9e-48	96.88	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10-B [Cucumis sativus]...	[more]

BLAST of HG10020672 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94C12	4.2e-42	82.47	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10-B OS=Arabidopsis th...	[more]
Q9M9B4	1.2e-41	81.44	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10-A OS=Arabidopsis th...	[more]
Q03015	1.5e-07	41.82	NADH-ubiquinone oxidoreductase 12 kDa subunit, mitochondrial OS=Neurospora crass...	[more]
P80267	7.7e-04	68.97	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10 (Fragment) OS=Solan...	[more]

BLAST of HG10020672 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KJX6	3.3e-50	98.96	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10-B OS=Cucurbita maxi...	[more]
A0A6J1E7Z3	3.3e-50	98.96	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10-B OS=Cucurbita mosc...	[more]
A0A6J1GRC0	2.8e-49	97.92	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10-B-like OS=Cucurbita...	[more]
A0A6J1JUQ8	3.7e-49	97.92	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10-B-like OS=Cucurbita...	[more]
A0A0A0LSZ4	1.4e-48	96.88	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G042310 PE=3 SV=1	[more]

BLAST of HG10020672 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G18410.1	3.0e-43	82.47	Complex I subunit NDUFS6	[more]
AT3G18410.2	3.0e-43	82.47	Complex I subunit NDUFS6	[more]
AT1G49140.1	8.6e-43	81.44	Complex I subunit NDUFS6	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..22
None	No IPR available	PANTHER	PTHR13094:SF4	NADH DEHYDROGENASE [UBIQUINONE] 1 BETA SUBCOMPLEX SUBUNIT 10-A-LIKE	coord: 1..102
IPR039993	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10	PANTHER	PTHR13094	NADH-UBIQUINONE OXIDOREDUCTASE PDSW SUBUNIT	coord: 1..102

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10020672.1	HG10020672.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005747	mitochondrial respiratory chain complex I
molecular_function	GO:0003824	catalytic activity