HG10020660 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10020660
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	DEVIL-like protein
Location	Chr05: 1339489 .. 1339674 (-)
RNA-Seq Expression	HG10020660
Synteny	HG10020660

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATCACTAGGAGGCCCACAAAGAAGGAAATTGAAGAAGATATGAAGATTAAAACTGGTTCTACAATTGAGAATTCTAAGACAAAATCCTTATGTAAAGGAGCTGCAGGATTTGTACAAGAAGGAAAAGGTAGGCTGTATATATTTGGGAGATGTGTTGCTATGCTTCTTTGCTGGCATGATTGA

mRNA sequence

ATGATCACTAGGAGGCCCACAAAGAAGGAAATTGAAGAAGATATGAAGATTAAAACTGGTTCTACAATTGAGAATTCTAAGACAAAATCCTTATGTAAAGGAGCTGCAGGATTTGTACAAGAAGGAAAAGGTAGGCTGTATATATTTGGGAGATGTGTTGCTATGCTTCTTTGCTGGCATGATTGA

Coding sequence (CDS)

ATGATCACTAGGAGGCCCACAAAGAAGGAAATTGAAGAAGATATGAAGATTAAAACTGGTTCTACAATTGAGAATTCTAAGACAAAATCCTTATGTAAAGGAGCTGCAGGATTTGTACAAGAAGGAAAAGGTAGGCTGTATATATTTGGGAGATGTGTTGCTATGCTTCTTTGCTGGCATGATTGA

Protein sequence

MITRRPTKKEIEEDMKIKTGSTIENSKTKSLCKGAAGFVQEGKGRLYIFGRCVAMLLCWHD

Homology

[Close]

BLAST of HG10020660 vs. NCBI nr
Match: XP_016899613.1 (PREDICTED: uncharacterized protein LOC103496621 [Cucumis melo])

HSP 1 Score: 112.1 bits (279), Expect = 1.7e-21
Identity = 53/60 (88.33%), Postives = 55/60 (91.67%), Query Frame = 0


Query: 2   ITRRPTKKEIEEDMKIKTGSTIENSKTKSLCKGAAGFVQEGKGRLYIFGRCVAMLLCWHD 61
           I  RPTKK IEEDMKI++GSTIENSKTKS CKGA GFVQEGKGRLYIFGRCVAMLLCWHD
Sbjct: 127 IMTRPTKKGIEEDMKIRSGSTIENSKTKSSCKGATGFVQEGKGRLYIFGRCVAMLLCWHD 186

[Close]

BLAST of HG10020660 vs. NCBI nr
Match: KAG7019956.1 (hypothetical protein SDJN02_18923, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 100.9 bits (250), Expect = 4.0e-18
Identity = 47/55 (85.45%), Postives = 49/55 (89.09%), Query Frame = 0


Query: 7  TKKEIEEDMKIKTGSTIENSKTKSLCKGAAGFVQEGKGRLYIFGRCVAMLLCWHD 62
          TK+E EEDMK+K GS IENSKTKS CK A GFVQEGKGRLYIFGRCVAMLLCWHD
Sbjct: 45 TKRETEEDMKMKAGSRIENSKTKSSCKEATGFVQEGKGRLYIFGRCVAMLLCWHD 99

[Close]

BLAST of HG10020660 vs. NCBI nr
Match: ONI09103.1 (hypothetical protein PRUPE_5G217900 [Prunus persica])

HSP 1 Score: 67.8 bits (164), Expect = 3.7e-08
Identity = 29/48 (60.42%), Postives = 38/48 (79.17%), Query Frame = 0


Query: 15 MKIKTG-STIENSKTKSLCKGAAGFVQEGKGRLYIFGRCVAMLLCWHD 62
          MK+K+   T+E SK +  CKG+ GF++EG+GRLYIF RC+ MLLCWHD
Sbjct: 1  MKMKSSDDTVEASKRRFSCKGSCGFLKEGRGRLYIFRRCIVMLLCWHD 48

[Close]

BLAST of HG10020660 vs. NCBI nr
Match: XP_042963970.1 (small polypeptide DEVIL 4-like [Carya illinoinensis] >KAG6619789.1 hypothetical protein I3842_Q081300 [Carya illinoinensis] >KAG6627433.1 hypothetical protein CIPAW_15G127400 [Carya illinoinensis] >KAG6675630.1 hypothetical protein I3842_15G112500 [Carya illinoinensis] >KAG7944529.1 hypothetical protein I3843_15G106400 [Carya illinoinensis])

HSP 1 Score: 64.3 bits (155), Expect = 4.1e-07
Identity = 29/47 (61.70%), Postives = 36/47 (76.60%), Query Frame = 0


Query: 15 MKIKTGSTIENSKTKSLCKGAAGFVQEGKGRLYIFGRCVAMLLCWHD 62
          MK+K  + I  SK K  CKG +GF++EG+GRLYIF RC+ MLLCWHD
Sbjct: 1  MKMK-NANIGGSKRKLPCKGLSGFLKEGRGRLYIFRRCIIMLLCWHD 46

[Close]

BLAST of HG10020660 vs. NCBI nr
Match: KAG2667348.1 (hypothetical protein I3760_15G109300 [Carya illinoinensis])

HSP 1 Score: 63.9 bits (154), Expect = 5.4e-07
Identity = 28/47 (59.57%), Postives = 36/47 (76.60%), Query Frame = 0


Query: 15 MKIKTGSTIENSKTKSLCKGAAGFVQEGKGRLYIFGRCVAMLLCWHD 62
          MK+K  + I  SK K  CKG +GF++EG+GRLY+F RC+ MLLCWHD
Sbjct: 1  MKMK-NANIGGSKRKLPCKGLSGFLKEGRGRLYVFRRCIIMLLCWHD 46

[Close]

BLAST of HG10020660 vs. ExPASy Swiss-Prot
Match: Q6X5T8 (Small polypeptide DEVIL 5 OS=Arabidopsis thaliana OX=3702 GN=DVL5 PE=2 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 5.6e-07
Identity = 23/43 (53.49%), Postives = 29/43 (67.44%), Query Frame = 0


Query: 19 TGSTIENSKTKSLCKGAAGFVQEGKGRLYIFGRCVAMLLCWHD 62
          TGS++  +K K   +G  G V+E K +LYI  RCV MLLCWHD
Sbjct: 4  TGSSVGGTKRKMWSRGVGGVVREQKAKLYIIRRCVVMLLCWHD 46

[Close]

BLAST of HG10020660 vs. ExPASy Swiss-Prot
Match: Q6X5U0 (Small polypeptide DEVIL 3 OS=Arabidopsis thaliana OX=3702 GN=DVL3 PE=2 SV=1)

HSP 1 Score: 49.3 bits (116), Expect = 1.8e-05
Identity = 21/40 (52.50%), Postives = 29/40 (72.50%), Query Frame = 0


Query: 23 IENSKTKSLC-KGAAGFVQEGKGRLYIFGRCVAMLLCWHD 62
          ++ +K K+ C K   G+++E KGRLYI  RCV ML+CWHD
Sbjct: 1  MKGTKKKTPCNKKLGGYLKEQKGRLYIIRRCVVMLICWHD 40

[Close]

BLAST of HG10020660 vs. ExPASy Swiss-Prot
Match: Q9SAF8 (Small polypeptide DEVIL 4 OS=Arabidopsis thaliana OX=3702 GN=DVL4 PE=2 SV=1)

HSP 1 Score: 43.9 bits (102), Expect = 7.6e-04
Identity = 18/36 (50.00%), Postives = 23/36 (63.89%), Query Frame = 0


Query: 26 SKTKSLCKGAAGFVQEGKGRLYIFGRCVAMLLCWHD 62
          SK +   KG    ++E + +LYI  RCV MLLCWHD
Sbjct: 6  SKRRVSSKGLGAVLKEQRAKLYIIRRCVVMLLCWHD 41

[Close]

BLAST of HG10020660 vs. ExPASy TrEMBL
Match: A0A1S4DUH1 (uncharacterized protein LOC103496621 OS=Cucumis melo OX=3656 GN=LOC103496621 PE=4 SV=1)

HSP 1 Score: 112.1 bits (279), Expect = 8.4e-22
Identity = 53/60 (88.33%), Postives = 55/60 (91.67%), Query Frame = 0


Query: 2   ITRRPTKKEIEEDMKIKTGSTIENSKTKSLCKGAAGFVQEGKGRLYIFGRCVAMLLCWHD 61
           I  RPTKK IEEDMKI++GSTIENSKTKS CKGA GFVQEGKGRLYIFGRCVAMLLCWHD
Sbjct: 127 IMTRPTKKGIEEDMKIRSGSTIENSKTKSSCKGATGFVQEGKGRLYIFGRCVAMLLCWHD 186

[Close]

BLAST of HG10020660 vs. ExPASy TrEMBL
Match: A0A0A0LTM0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G042190 PE=4 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 1.4e-21
Identity = 52/57 (91.23%), Postives = 54/57 (94.74%), Query Frame = 0


Query: 5  RPTKKEIEEDMKIKTGSTIENSKTKSLCKGAAGFVQEGKGRLYIFGRCVAMLLCWHD 62
          RPTKK IEEDMKI++GSTIENSKTKS CKGA GFVQEGKGRLYIFGRCVAMLLCWHD
Sbjct: 3  RPTKKGIEEDMKIRSGSTIENSKTKSSCKGATGFVQEGKGRLYIFGRCVAMLLCWHD 59

[Close]

BLAST of HG10020660 vs. ExPASy TrEMBL
Match: A0A251PBZ5 (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_5G217900 PE=4 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 1.8e-08
Identity = 29/48 (60.42%), Postives = 38/48 (79.17%), Query Frame = 0


Query: 15 MKIKTG-STIENSKTKSLCKGAAGFVQEGKGRLYIFGRCVAMLLCWHD 62
          MK+K+   T+E SK +  CKG+ GF++EG+GRLYIF RC+ MLLCWHD
Sbjct: 1  MKMKSSDDTVEASKRRFSCKGSCGFLKEGRGRLYIFRRCIVMLLCWHD 48

[Close]

BLAST of HG10020660 vs. ExPASy TrEMBL
Match: A0A2I4G8E8 (uncharacterized protein LOC109005607 OS=Juglans regia OX=51240 GN=LOC109005607 PE=4 SV=2)

HSP 1 Score: 62.8 bits (151), Expect = 5.8e-07
Identity = 28/45 (62.22%), Postives = 35/45 (77.78%), Query Frame = 0


Query: 17 IKTGSTIENSKTKSLCKGAAGFVQEGKGRLYIFGRCVAMLLCWHD 62
          +K G+ I  SK K  CKG +GF++EG+GRLYIF RC+ MLLCWHD
Sbjct: 1  MKNGN-IGGSKRKLPCKGLSGFLKEGRGRLYIFRRCIIMLLCWHD 44

[Close]

BLAST of HG10020660 vs. ExPASy TrEMBL
Match: A0A2I4FLH9 (uncharacterized protein LOC109000148 OS=Juglans regia OX=51240 GN=LOC109000148 PE=4 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 5.8e-07
Identity = 26/39 (66.67%), Postives = 31/39 (79.49%), Query Frame = 0


Query: 23 IENSKTKSLCKGAAGFVQEGKGRLYIFGRCVAMLLCWHD 62
          I  SK K  CKG +GF++EG+GRLYIF RC+ MLLCWHD
Sbjct: 1  IGGSKRKLPCKGLSGFLKEGRGRLYIFRRCIIMLLCWHD 39

[Close]

BLAST of HG10020660 vs. TAIR 10
Match: AT1G68825.1 (ROTUNDIFOLIA like 15 )

HSP 1 Score: 54.3 bits (129), Expect = 4.0e-08
Identity = 23/43 (53.49%), Postives = 29/43 (67.44%), Query Frame = 0


Query: 19 TGSTIENSKTKSLCKGAAGFVQEGKGRLYIFGRCVAMLLCWHD 62
          TGS++  +K K   +G  G V+E K +LYI  RCV MLLCWHD
Sbjct: 4  TGSSVGGTKRKMWSRGVGGVVREQKAKLYIIRRCVVMLLCWHD 46

[Close]

BLAST of HG10020660 vs. TAIR 10
Match: AT1G68825.2 (ROTUNDIFOLIA like 15 )

HSP 1 Score: 54.3 bits (129), Expect = 4.0e-08
Identity = 23/43 (53.49%), Postives = 29/43 (67.44%), Query Frame = 0


Query: 19 TGSTIENSKTKSLCKGAAGFVQEGKGRLYIFGRCVAMLLCWHD 62
          TGS++  +K K   +G  G V+E K +LYI  RCV MLLCWHD
Sbjct: 4  TGSSVGGTKRKMWSRGVGGVVREQKAKLYIIRRCVVMLLCWHD 46

[Close]

BLAST of HG10020660 vs. TAIR 10
Match: AT1G67265.1 (ROTUNDIFOLIA like 21 )

HSP 1 Score: 49.3 bits (116), Expect = 1.3e-06
Identity = 21/40 (52.50%), Postives = 29/40 (72.50%), Query Frame = 0


Query: 23 IENSKTKSLC-KGAAGFVQEGKGRLYIFGRCVAMLLCWHD 62
          ++ +K K+ C K   G+++E KGRLYI  RCV ML+CWHD
Sbjct: 1  MKGTKKKTPCNKKLGGYLKEQKGRLYIIRRCVVMLICWHD 40

[Close]

BLAST of HG10020660 vs. TAIR 10
Match: AT1G13245.1 (ROTUNDIFOLIA like 17 )

HSP 1 Score: 43.9 bits (102), Expect = 5.4e-05
Identity = 18/36 (50.00%), Postives = 23/36 (63.89%), Query Frame = 0


Query: 26 SKTKSLCKGAAGFVQEGKGRLYIFGRCVAMLLCWHD 62
          SK +   KG    ++E + +LYI  RCV MLLCWHD
Sbjct: 6  SKRRVSSKGLGAVLKEQRAKLYIIRRCVVMLLCWHD 41

[Close]

BLAST of HG10020660 vs. TAIR 10
Match: AT1G07490.1 (ROTUNDIFOLIA like 3 )

HSP 1 Score: 42.0 bits (97), Expect = 2.0e-04
Identity = 20/46 (43.48%), Postives = 28/46 (60.87%), Query Frame = 0


Query: 19  TGSTIENSKTK----SLCKGAAGFVQEGKGRLYIFGRCVAMLLCWH 61
           + S+I  S +K    S+ +  +   +E KGR YI  RCVAML+CWH
Sbjct: 58  SSSSISRSSSKKEKGSITQKYSSLAKEQKGRFYIMRRCVAMLVCWH 103

The following BLAST results are available for this feature:

BLAST of HG10020660 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_016899613.1	1.7e-21	88.33	PREDICTED: uncharacterized protein LOC103496621 [Cucumis melo]	[more]
KAG7019956.1	4.0e-18	85.45	hypothetical protein SDJN02_18923, partial [Cucurbita argyrosperma subsp. argyro...	[more]
ONI09103.1	3.7e-08	60.42	hypothetical protein PRUPE_5G217900 [Prunus persica]	[more]
XP_042963970.1	4.1e-07	61.70	small polypeptide DEVIL 4-like [Carya illinoinensis] >KAG6619789.1 hypothetical ...	[more]
KAG2667348.1	5.4e-07	59.57	hypothetical protein I3760_15G109300 [Carya illinoinensis]	[more]

BLAST of HG10020660 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6X5T8	5.6e-07	53.49	Small polypeptide DEVIL 5 OS=Arabidopsis thaliana OX=3702 GN=DVL5 PE=2 SV=1	[more]
Q6X5U0	1.8e-05	52.50	Small polypeptide DEVIL 3 OS=Arabidopsis thaliana OX=3702 GN=DVL3 PE=2 SV=1	[more]
Q9SAF8	7.6e-04	50.00	Small polypeptide DEVIL 4 OS=Arabidopsis thaliana OX=3702 GN=DVL4 PE=2 SV=1	[more]

BLAST of HG10020660 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S4DUH1	8.4e-22	88.33	uncharacterized protein LOC103496621 OS=Cucumis melo OX=3656 GN=LOC103496621 PE=...	[more]
A0A0A0LTM0	1.4e-21	91.23	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G042190 PE=4 SV=1	[more]
A0A251PBZ5	1.8e-08	60.42	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_5G217900 PE=4 SV=1	[more]
A0A2I4G8E8	5.8e-07	62.22	uncharacterized protein LOC109005607 OS=Juglans regia OX=51240 GN=LOC109005607 P...	[more]
A0A2I4FLH9	5.8e-07	66.67	uncharacterized protein LOC109000148 OS=Juglans regia OX=51240 GN=LOC109000148 P...	[more]

BLAST of HG10020660 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G68825.1	4.0e-08	53.49	ROTUNDIFOLIA like 15	[more]
AT1G68825.2	4.0e-08	53.49	ROTUNDIFOLIA like 15	[more]
AT1G67265.1	1.3e-06	52.50	ROTUNDIFOLIA like 21	[more]
AT1G13245.1	5.4e-05	50.00	ROTUNDIFOLIA like 17	[more]
AT1G07490.1	2.0e-04	43.48	ROTUNDIFOLIA like 3	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR012552	DVL	PFAM	PF08137	DVL	coord: 41..58 e-value: 1.6E-9 score: 37.4
None	No IPR available	PANTHER	PTHR47855:SF5	SUBFAMILY NOT NAMED	coord: 4..61
None	No IPR available	PANTHER	PTHR47855	OS01G0525701 PROTEIN	coord: 4..61

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10020660.1	HG10020660.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008285	negative regulation of cell population proliferation
biological_process	GO:0048367	shoot system development
cellular_component	GO:0005886	plasma membrane