HG10020582 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10020582
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	Pentose-5-phosphate 3-epimerase
Location	Chr05: 704141 .. 711690 (+)
RNA-Seq Expression	HG10020582
Synteny	HG10020582

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTGTTGCTTCGTTATGTCAATCCACTATGCAATCCAAGGTCAGTGGGTTTATCGGAGGTCTCACTTTTCAGAAACCACCTCTCTCTCAACCTTCATCTCTTACCTTTTCGAGGTAATTTGATTCATGGGGTCCCCTTTTTCTTGTTTCTCTCTTTGATTTCTTTAAGCTTTCTTAGATTGCTGTGGTTATCAATTTCTCAAACTTTGTAAATCCTTGACTGTAAATGAACTAGCAATTGTGTTTTTTACATTGCCCTGAAATTGGGAATTCCTAAGTAATTTTAGTTTGTTTATGGCATGGCAATTGAGAGGTAGCTTTGACTTCCCTTCTGTCTTCTGATTCATAATCATGGTATGAGGTGATAGCTTAGCTCTGTCTCTTTGAAATTTTTAGATTGAACTAATGAGCTTTAGGATTTGTGTATTTTTGAGACACTCATTGGTTCTTGTGGAGTTGGAGTATGAAACAAATTATTTGGGAGTGTGTTCTTTTCCGAGTGTGATTTATCTGGTTTTCAGTGAAAACTTTGCCGAAATTTTTTTGGATTTTGATTTGATCAAGTTAATTTTTATAATGAAGGATTTTCCTAGCCACTTATTTTGAAAAGCATTTTTAAAGTTCGACAATGGGTTCTATAGTTTAGTTGGAATCTATTGTTGTCATGCCACATCCTAGGTTAGGTAGAGTAATCCGGGGTAGGGTGTGACAATTTTTCTTTCTCATCTATTTGATTTGTGTGTTTTGCAAGACCTTCCGTATATGTAATAAGTCCCCTCTCTTTACATTGGAATAGAGTAGATTTTGTGACACCCATTGCTGTTTTTTGGTTCCACTTTGAACTCAGCTACATAAAGCATTGCTGAGTGTCTTCCACTTTGTACTTCTATTTTTTTATGTACTTTCTGAGTGGATGGACTTAGAGAATGGATTATATTTATGAAGAACTATTTGGTATCCAATGTGCTTCCGTTTACTTTCTGCTTCTAATTTTCTAGGAGGAGGTTCAGAAATGTGGTGAAAGCTTCAGCTCGGGTTGATAAATACTCAAAATCTGATATCATCGTTTCTCCCTCAATCCTTTCTGCTAACTTTGCCAAATTGGGAGAGCAGGTTCGTTTATTGCTCTGATCTTCCCATTATTTTAGTTTGTTTTGTTGTGCACTTCCAAGTAATTTATCAAATTGCTTTGGAGATTTATGCAGATGGGTAAGGATTGACATTCTCATCTTTTGTAGGTCAAAGCAGTGGAACTGGCAGGTTGTGATTGGATTCATGTTGATGTAATGGATGGCCGTTTTGTTCCAAATATCACAATTGGACCTCTTGTCGTTGATGCTCTACGCCCTGTGACAGATCTTCCTTTAGATGTGCATTTGGTATGCTTCTTTTTCACATTGATTCTCTTTGGTGTTAGCAGTGATTCTTAAGTACTTCTGTTAACATAAACTCAAAGCATTATAGATGATTGTGGAGCCTGAGCAGCGTGTGCCAGACTTTATAAAGGCTGGTGCTGATATTGTTAGTGTTCATTGTGAGCAATCTTCCACAATCCATCTGCACCGCACCGTTAATCAAGTAAGACTTCCTCTGCTGTGACATAGTACAGAATTAGGTGCATGTTTTCAATCCTAAAAAGATATATTTCTTAATGAAGAAAAAATTGCAAAATCCAACATGTTCTTTAGAATACAGTGGAACTGTATATGTTCCTACCGTGCTGAAGTAAGATTTCATATGTGATGCAATACGGAATTAGCTGCACATTGTTAGTTTTTTTCTCAAAATCTTAATAAGGCAAAAATCAACAAGCTCTTTCGTATAAAACAAAAGCTTAAGGGTTCCTAGTGTTATTATTTTCTGAAACTTCGTGGACTGAAAAGGATAATCATATTGTTGAAAACTGCTTTTATTGGTGTTCATAGCTGTTTTCTTGAATTCCGTTTTGCTTCATTCCAGAAAGGATTGCTTGCTGACTTGCCATTGAAAATGAATTCCTTGTTAGACGGAATTCATACATTTTAACATATATCTATATTCATAATGGTCATTCCTTCAAATATGATTCAGATAAAAAGTCTTGGAGCTAAAGCTGGAGTGGTCCTAAATCCTGCTACTTCACTCAGCACAATTGAATATGTCCTTGACGGTGACTCCCTCTCTCCCCCCCTATACAATTGCTGAGATGTTCCACTGTGAGGATTATTAAAAAGAGTTGGAATCTTTATATCTATTGAGGGTTTTGAGGTTCAGTGGTGTTATTTGAAATAAATTTGACATAAATTTAGGGTTGAAAATGACCAAGAAAGTATTGATTGGATTAGAGAATAAGACCTGATATTTTTTAAGCCATTTGGAGGTTAAGAGTGGATATCATTAATCATACCAAAAAGGAGATGATAGGAAAATATGCATTGGTATTTGTGTGAACAAAATGAGAGGAATTAATTAATAATGCCCTTTGCTTGTTTACAGTGGTTGATTTGGTCTTAATTATGTCGGTAAATCCTGGTTTTGGTGGGCAAAGCTTCATTGAGAGCCAAGTAAAGAAAATCTCAGAATTAAGAAGACTATGTGCTGAAAAGGTACAATTTCACTTATTGGTAGCTTTTTCCTGAGGAACTTCTCTTTCCCAACATTACAAGGATTACAAACCCATTGGCATTTCATTTACTTTGTTGCAGGGAGTGAACCCGTGGATCGAAGTGGATGGTGGAGTTGGTCCAGGCAACGCATACAAGGTTCATACAATAACATTTTCTGAAATAGCAACTTTATTACATGAGTTTCTAAAGCAAGCTTTCGATTACCACCAATTGCAGGTCATTGAGGCTGGAGCCAATGCTTTAGTTGCAGGTTCTGCTGTTTTTGGAGCTAAAGATTATGCTGAGGGTATGATCCATACAGTTCCCTCCACTCCTCATTCTCACAAATGTTTAGAACATTTTAACTAAATTATCCCCTCGACTCGATTCTTGAACAGCCATAAAAGGAATCAAAACAAGCAAAAGGCCAGAGGCAGTTCCAGTATGAAAGTAACTTGTACAAGACCTGAGTTGTTTCAGTTGATAGTACTGTTGTGTTATTCATTGCCATGTAAGTTGTCCTCCTTGCACATTTTTATTGTTTCGATCGATAGAGAACAGCTACGAGTCTGTACGATCTTCAACATGTCCTACTATGATGCCACCTGATCTTACCACTTCTTTTCTTCTAAATGCAGAGAGTCTCCAACTGCATAGGTAGCAGAACATTTTGTTCTTCAAGCTCTTATCCCAGCCATGGTTGCTACCTCCACAGTTTTATTCCTTGTGAAAAGAAGCCTGTAGATTGCCACTTGAAGATTTGTTATGTACTATAACATACCAGTACAAATTGAGTACAAATTCAATAATATGAACTTGGGAGCAATAATATTATACTTTCCGTTTTGATTGTCCTAATAAAAGCTTCTTAGGATATTTTAAGAACATGTTTTAAGAATAAAGAAAATAAATAGTTAAATTTACGTCTGTAATTTTAAGGAAACTTCTGAGTTACTGGTTATGAATTAGAAATGTAATCTCTAAATTTTGATGACTTATTTTGTCTCTAAAGTCTTGTGGACAATTGAATAAAATAGGAAGGAAGAAAAAGGTGAACGTTGAGTGTGTTACTGTTAGGGGGGATAAAAAAAAATCCAAAAGACTGAGCTGACCAATCGAGATAGATCGAACCAACCAGTTGGTTGATTATGAGCATTTTCTATCGAAGTCGATTTTTGACCATATATGCAATGGAGAATCAAACATCTGACTTCGAGGTCAATAATATAATTTTATTATAGTTGAGCTATACATTGTTAATGAAAACTTAAAAAAAAATTAACATGAAGAACTTGATTTTATAATTTTTAGTTCTTTCAAGTTTTCTTGTAACAATTTCACAAGTTTATCCAGTGATTGATCTTTTTTCTCCTGAAACAAAACAACTAGAGATTGAAAATTAAAAATTGTTTTCTCCTTAAATTTATAATTTAATTTGACAATAAAAAAAAAACTAAACTTTTGAATTAAAAATGAGTGAGATGCGTGGAAAATGGAAATGAACAATAAAAAAATTCCGAATTTTTAATTATTGAAGTGCCAGGCAAGGGTCAAATGCAAGAAACCTTTCCTTCCAAAAGATTTTGACGCGGATGTCCAATCGCATTGTATCGAATTTGAGAGAGAAATGCAAGTTAACGAACCCGCCATTTCCGCCATTGGAAGAAGCTCCAGAGTTGCGCAACAATTTCTTTTCTCTGTATTAAAGTGCTGTAGATCTGTTCGTAATCTTGCAAAAATCCATGCTCAAATAGTCGTCAACGACTTTGCCCAGAAAAATTACATCCTTGTCAACCTTTTGTCGCTCTATATATCTTTTGGTTCTCTTGGAAGTGCCCAGAAAGTTTTCGAGGATATTAATGCACCGAGTACGACTGTGTGGAACCAGATAATTCGAGGCCATGCGGGGAGCAAAACGCCACAAGAATCAATTGCGCTGTTCAAACGAATGACAGCGACGGAAGTTGAAGCTGATGGGTTCACGTATTCTTTTCTTCTGAGTGCGTGTGTGAGATCGAGGTTATTCAGAGAGGGGGAACAGATTCATGGGAGAGTTTTAGCAAATGGGTATTGGTCTAATTTGTATGTTAGAACGAATTTGATCAATTTATACGCAAATGGTGGAGATGGAGGGGATTTTGATCTTAAGCGTGCGCGTTACATGTTTGATGAAATGCCTGACTCAAATGTCGTGGGCTGGAATTCCTTACTCGCAGGATATGTTAGAAGTGGTGATTTTGATGGGGCTAGAAAAGTTTTTGACGAGATGCCTGAGAGGAATGTCCAGACATGGACTACAATGGTTGCAGGGTTTGGTCAAAATGGCCATTGTAAGCTAGCTTTGTCACTATTTAATCAAATGAGAAGGGCTGGTGTGGAATTGGATCAGGTGGCATTGGTGGCTGCATTGTCAGCTTGTGCTGAATTGGGAGACTTGACATTGGGAAAATGGATTCATTGGTATGTTGATAGAACATGGCGGAGTAAACACCTCCCAGTATTGGTGTCTCTGAGCAATTCTCTTATGCATATGTATGCAAGTTGTGGTGTTATGGATTTAGCATATAAAGTGTTTGAAGAAATACCCCAACGAAACACCGTGTCTTGGTCAAGCATTATCACTGGGTTTGCCAAACAGGGTCGTGGAGAAGAAGCTATTAGAGTCTTTCAGTTGATGCTGTGCTCTGGCCAAAATGAAGTGAGACCTGACGAGATAACCTTCATTGGAGTTCTCACTGCTTGTAGCCATGCTGGTTTGATCATCGATGGCATCCGACTTTTCCGGTCTATGCACAAAAATTTCGGAGTCATACCACAGATTGAACATTATGGATGCATGGTTGATCTCTTGAGCCGTGCAGGTTTACTGAGTGAAGCATTGAGGCTGATTGAAAGTATGCCAATGGAGCCAAACAATGCTGTGTGGGGAGCACTTCTCAATGGCTGTAGAATTCACAAGAATGACGAGATCGCATCCCATGTTGCGAAACAATTGGCTTTCAAAATCGATCCCAGCAACTAATGTTCATGCTGCAGACGAACGTTGGCGAGACACTGCCATTTACGAGAACATGCTCGACGTAGGAGTGAAGAAACCTTCAGGAAGAAGTTGTATTGAGATTAATGGAGTCGTATGTGATTTCGTGGTGAGGGATAAGACTCATAAGGATGCGAGTTGATGTACGAGATGCTTGGTAACATGACCAGACAAGCCCGAATGGAGAGCTACAAATCAGAGACATTATCAAAGGCATTTGTTGGTGTCTAGGAGGTGCAGTTGGAGAACTAAGAAGTGTTGGACGGGTATGGCAACTCTAGAGGGGTGAATAAAGTTTCTTTAACCTAATGAAAATTTTTTCCTAATGTGGGCCCAATTAAGCAAGTCAATGCGCTTTTTGCTAATCAGTAATTTAAACAATAATTTAATGTAAATAAATTCAACCCAAAATAATCAAGAAATTAAAACTAACACTTTATAACATCCTATTTAATTTCAACAAGAATGTATATGATATGGAATTTTGAGAACTATCAATCTCAATAAATAATTATGAGCAGTTGATTTCAAGAATTAAAATGTGCAATTAATTTCATGCAATGAAATACAATAACAAAAATTAATTACAAAAATAAATAGAAAAGGGATAGAGAAAATAACACCGGAAATTTATAGTGGTTCGGCACAACCGGCCTACATCCACTTCCCACTACGAACTTGACTCTTTCCACGGTTTAGAGTCGAACCGTTATAACGTTCCTTTTTCGGGCGCAAGAACAAACCCGATCCTTTCCACCGTTGAGGATCAAACCGTTAAAACCACTCTTTTTAGGGATCAAGAGCAACCCTTACAATGGATTTGGAAATGAAGAGCAATATGAGAAAACTCTCTCAAAGAGTAAATTTACAAATTTGAAGCACTCAATAAATCAATCCTCACAATACAATAAATCTCTCTCAAGAATTAGATGAAAAGAATAAAATTGAAGCTTTGAGAGAATAACAATGGTGGCTTTGAGGATTGTAAAAATATGTAAAATTGTTGTTGTAATTTTGGAGAAGATGAAGTGTTTAAAAAGAGATAGGGTAGGTAAGAACCAAATTTATTTTGAGCCATTAGATGTTGGTAAAAGAAAATTGAATGGTGGAGATTTAAATTTAACTAGTCGTTGGACACACACATAATATAATATAAAATTCATTTTTTTTTAAAGACAACTAGCCGTTAGACACAAACATATATAATAATATTAAATTTATTTTCTTTTTAAATTCATTTTGTTTTTAAAATCATTCTTTTTAAAACCAACAAAAATCAAAGCTCCATGTGTCACTTATCTATTGCTCCACTTGTTATCTTCTAGTAGGTCCACTTTGATGATTTGGCCGCCACGTCATCGACATCATGTATTTTTCCCTTAAGCTTCTTCTAGCCATATCTTCTTCGTTTGAACTCCGATTTGAGTGATTCAAATTGCGTTGGAACCGTTGTTCCAAGCTCTACACAATAGACACTTTAAAAACACTAAATTTTTTTATAAATAAAAGCAGGTTTGTTATCATCAAAACATTAATTAATTAATTAAAATTAATTAATTTGAGATTAAGGGCCAAAAGGCCAACAAGAAGAAAGATTTCTGGAAAGATTGCTATTTTGCTGCTGCAACATTCTAGTTGAAACTGAATGTAGGATTCATTTCCTTATAGTACTCTCAATACTCTTCTGAAGAAACTATGCAAATGTATTTGGATTAATGGAAATCTCAATTATAATTTGATATGAACTAAGACGCTCGTGTGTTACCTCTGAGACCAATCACACGCTCAAGAGCCAAGAGGCTACAATTAGCGTTGAACTCTCACATTCAAGTGGAGGTGAACTCAATTGAGGGGATTCAAGCAGCAACATCTTATCATAAACTTTATAATTTGTTTCAGTCGATGCTACAAGATGAAACCGATTGA

mRNA sequence

ATGGCTGTTGCTTCGTTATGTCAATCCACTATGCAATCCAAGGTCAGTGGGTTTATCGGAGGTCTCACTTTTCAGAAACCACCTCTCTCTCAACCTTCATCTCTTACCTTTTCGAGGAGGAGGTTCAGAAATGTGGTGAAAGCTTCAGCTCGGGTTGATAAATACTCAAAATCTGATATCATCGTTTCTCCCTCAATCCTTTCTGCTAACTTTGCCAAATTGGGAGAGCAGGTCAAAGCAGTGGAACTGGCAGGTTGTGATTGGATTCATGTTGATGTAATGGATGGCCGTTTTGTTCCAAATATCACAATTGGACCTCTTGTCGTTGATGCTCTACGCCCTGTGACAGATCTTCCTTTAGATGTGCATTTGATGATTGTGGAGCCTGAGCAGCGTGTGCCAGACTTTATAAAGGCTGGTGCTGATATTGTTAGTGTTCATTGTGAGCAATCTTCCACAATCCATCTGCACCGCACCGTTAATCAAATAAAAAGTCTTGGAGCTAAAGCTGGAGTGGTCCTAAATCCTGCTACTTCACTCAGCACAATTGAATATGTCCTTGACGTGGTTGATTTGGTCTTAATTATGTCGGTAAATCCTGGTTTTGGTGGGCAAAGCTTCATTGAGAGCCAAGTAAAGAAAATCTCAGAATTAAGAAGACTATGTGCTGAAAAGGGAGTGAACCCGTGGATCGAAGTGGATGGTGGAGTTGGTCCAGGCAACGCATACAAGGTCATTGAGGCTGGAGCCAATGCTTTAGTTGCAGGTTCTGCTGTTTTTGGAGCTAAAGATTATGCTGAGGCCATAAAAGGAATCAAAACAAGCAAAAGGCCAGAGGCAGTTCCAGCAAGGGTCAAATGCAAGAAACCTTTCCTTCCAAAAGATTTTGACGCGGATGTCCAATCGCATTGTATCGAATTTGAGAGAGAAATGCAAGTTAACGAACCCGCCATTTCCGCCATTGGAAGAAGCTCCAGAGTTGCGCAACAATTTCTTTTCTCTGTATTAAAGTGCTGTAGATCTGTTCGTAATCTTGCAAAAATCCATGCTCAAATAGTCGTCAACGACTTTGCCCAGAAAAATTACATCCTTGTCAACCTTTTGTCGCTCTATATATCTTTTGGTTCTCTTGGAAGTGCCCAGAAAGTTTTCGAGGATATTAATGCACCGAGTACGACTGTGTGGAACCAGATAATTCGAGGCCATGCGGGGAGCAAAACGCCACAAGAATCAATTGCGCTGTTCAAACGAATGACAGCGACGGAAGTTGAAGCTGATGGGTTCACGTATTCTTTTCTTCTGAGTGCGTGTGTGAGATCGAGGTTATTCAGAGAGGGGGAACAGATTCATGGGAGAGTTTTAGCAAATGGGTATTGGTCTAATTTGTATGTTAGAACGAATTTGATCAATTTATACGCAAATGGTGGAGATGGAGGGGATTTTGATCTTAAGCGTGCGCGTTACATGTTTGATGAAATGCCTGACTCAAATGTCGTGGGCTGGAATTCCTTACTCGCAGGATATGTTAGAAGTGGTGATTTTGATGGGGCTAGAAAAGTTTTTGACGAGATGCCTGAGAGGAATGTCCAGACATGGACTACAATGGTTGCAGGGTTTGGTCAAAATGGCCATTGTAAGCTAGCTTTGTCACTATTTAATCAAATGAGAAGGGCTGGTGTGGAATTGGATCAGGTGGCATTGGTGGCTGCATTGTCAGCTTGTGCTGAATTGGGAGACTTGACATTGGGAAAATGGATTCATTGGTATGTTGATAGAACATGGCGGAGTAAACACCTCCCAGTATTGGTGTCTCTGAGCAATTCTCTTATGCATATGTATGCAAGTTGTGGTGTTATGGATTTAGCATATAAAGTGTTTGAAGAAATACCCCAACGAAACACCGTGTCTTGGTCAAGCATTATCACTGGGTTTGCCAAACAGGGTCGTGGAGAAGAAGCTATTAGATCGATGCTACAAGATGAAACCGATTGA

Coding sequence (CDS)

ATGGCTGTTGCTTCGTTATGTCAATCCACTATGCAATCCAAGGTCAGTGGGTTTATCGGAGGTCTCACTTTTCAGAAACCACCTCTCTCTCAACCTTCATCTCTTACCTTTTCGAGGAGGAGGTTCAGAAATGTGGTGAAAGCTTCAGCTCGGGTTGATAAATACTCAAAATCTGATATCATCGTTTCTCCCTCAATCCTTTCTGCTAACTTTGCCAAATTGGGAGAGCAGGTCAAAGCAGTGGAACTGGCAGGTTGTGATTGGATTCATGTTGATGTAATGGATGGCCGTTTTGTTCCAAATATCACAATTGGACCTCTTGTCGTTGATGCTCTACGCCCTGTGACAGATCTTCCTTTAGATGTGCATTTGATGATTGTGGAGCCTGAGCAGCGTGTGCCAGACTTTATAAAGGCTGGTGCTGATATTGTTAGTGTTCATTGTGAGCAATCTTCCACAATCCATCTGCACCGCACCGTTAATCAAATAAAAAGTCTTGGAGCTAAAGCTGGAGTGGTCCTAAATCCTGCTACTTCACTCAGCACAATTGAATATGTCCTTGACGTGGTTGATTTGGTCTTAATTATGTCGGTAAATCCTGGTTTTGGTGGGCAAAGCTTCATTGAGAGCCAAGTAAAGAAAATCTCAGAATTAAGAAGACTATGTGCTGAAAAGGGAGTGAACCCGTGGATCGAAGTGGATGGTGGAGTTGGTCCAGGCAACGCATACAAGGTCATTGAGGCTGGAGCCAATGCTTTAGTTGCAGGTTCTGCTGTTTTTGGAGCTAAAGATTATGCTGAGGCCATAAAAGGAATCAAAACAAGCAAAAGGCCAGAGGCAGTTCCAGCAAGGGTCAAATGCAAGAAACCTTTCCTTCCAAAAGATTTTGACGCGGATGTCCAATCGCATTGTATCGAATTTGAGAGAGAAATGCAAGTTAACGAACCCGCCATTTCCGCCATTGGAAGAAGCTCCAGAGTTGCGCAACAATTTCTTTTCTCTGTATTAAAGTGCTGTAGATCTGTTCGTAATCTTGCAAAAATCCATGCTCAAATAGTCGTCAACGACTTTGCCCAGAAAAATTACATCCTTGTCAACCTTTTGTCGCTCTATATATCTTTTGGTTCTCTTGGAAGTGCCCAGAAAGTTTTCGAGGATATTAATGCACCGAGTACGACTGTGTGGAACCAGATAATTCGAGGCCATGCGGGGAGCAAAACGCCACAAGAATCAATTGCGCTGTTCAAACGAATGACAGCGACGGAAGTTGAAGCTGATGGGTTCACGTATTCTTTTCTTCTGAGTGCGTGTGTGAGATCGAGGTTATTCAGAGAGGGGGAACAGATTCATGGGAGAGTTTTAGCAAATGGGTATTGGTCTAATTTGTATGTTAGAACGAATTTGATCAATTTATACGCAAATGGTGGAGATGGAGGGGATTTTGATCTTAAGCGTGCGCGTTACATGTTTGATGAAATGCCTGACTCAAATGTCGTGGGCTGGAATTCCTTACTCGCAGGATATGTTAGAAGTGGTGATTTTGATGGGGCTAGAAAAGTTTTTGACGAGATGCCTGAGAGGAATGTCCAGACATGGACTACAATGGTTGCAGGGTTTGGTCAAAATGGCCATTGTAAGCTAGCTTTGTCACTATTTAATCAAATGAGAAGGGCTGGTGTGGAATTGGATCAGGTGGCATTGGTGGCTGCATTGTCAGCTTGTGCTGAATTGGGAGACTTGACATTGGGAAAATGGATTCATTGGTATGTTGATAGAACATGGCGGAGTAAACACCTCCCAGTATTGGTGTCTCTGAGCAATTCTCTTATGCATATGTATGCAAGTTGTGGTGTTATGGATTTAGCATATAAAGTGTTTGAAGAAATACCCCAACGAAACACCGTGTCTTGGTCAAGCATTATCACTGGGTTTGCCAAACAGGGTCGTGGAGAAGAAGCTATTAGATCGATGCTACAAGATGAAACCGATTGA

Protein sequence

MAVASLCQSTMQSKVSGFIGGLTFQKPPLSQPSSLTFSRRRFRNVVKASARVDKYSKSDIIVSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQSSTIHLHRTVNQIKSLGAKAGVVLNPATSLSTIEYVLDVVDLVLIMSVNPGFGGQSFIESQVKKISELRRLCAEKGVNPWIEVDGGVGPGNAYKVIEAGANALVAGSAVFGAKDYAEAIKGIKTSKRPEAVPARVKCKKPFLPKDFDADVQSHCIEFEREMQVNEPAISAIGRSSRVAQQFLFSVLKCCRSVRNLAKIHAQIVVNDFAQKNYILVNLLSLYISFGSLGSAQKVFEDINAPSTTVWNQIIRGHAGSKTPQESIALFKRMTATEVEADGFTYSFLLSACVRSRLFREGEQIHGRVLANGYWSNLYVRTNLINLYANGGDGGDFDLKRARYMFDEMPDSNVVGWNSLLAGYVRSGDFDGARKVFDEMPERNVQTWTTMVAGFGQNGHCKLALSLFNQMRRAGVELDQVALVAALSACAELGDLTLGKWIHWYVDRTWRSKHLPVLVSLSNSLMHMYASCGVMDLAYKVFEEIPQRNTVSWSSIITGFAKQGRGEEAIRSMLQDETD

Homology

[Close]

BLAST of HG10020582 vs. NCBI nr
Match: XP_038895403.1 (pentatricopeptide repeat-containing protein At5g66520-like [Benincasa hispida])

HSP 1 Score: 632.5 bits (1630), Expect = 4.1e-177
Identity = 311/345 (90.14%), Postives = 327/345 (94.78%), Query Frame = 0


Query: 311 MQVNEPAISAIGRSSRVAQQFLFSVLKCCRSVRNLAKIHAQIVVNDFAQKNYILVNLLSL 370
           M+VN+ AISAIGRSSRV QQF+FSVLKCC SVRNLAKIHAQI+V+ FAQKNYILVNLLSL
Sbjct: 1   MEVNKTAISAIGRSSRVGQQFIFSVLKCCISVRNLAKIHAQILVSGFAQKNYILVNLLSL 60

Query: 371 YISFGSLGSAQKVFEDINAPSTTVWNQIIRGHAGSKTPQESIALFKRMTATEVEADGFTY 430
           YISFGSLG+AQKVFED +APSTTVWNQIIRGHA SKTPQESI LFKRMTA EVEADGFTY
Sbjct: 61  YISFGSLGTAQKVFEDTSAPSTTVWNQIIRGHARSKTPQESIQLFKRMTAAEVEADGFTY 120

Query: 431 SFLLSACVRSRLFREGEQIHGRVLANGYWSNLYVRTNLINLYANGGDGGDFDLKRARYMF 490
           SFLLSACVRSRLFREGEQIHGRVL NGYWSN YVRTNLINLYANGG  GDFDLKRARYMF
Sbjct: 121 SFLLSACVRSRLFREGEQIHGRVLVNGYWSNTYVRTNLINLYANGGGVGDFDLKRARYMF 180

Query: 491 DEMPDSNVVGWNSLLAGYVRSGDFDGARKVFDEMPERNVQTWTTMVAGFGQNGHCKLALS 550
           DEMPD+NVVGWNSLLAGYVR GDFDGARKVFDEMPERNVQTWTTMVAGF QNG CKLALS
Sbjct: 181 DEMPDANVVGWNSLLAGYVRRGDFDGARKVFDEMPERNVQTWTTMVAGFAQNGQCKLALS 240

Query: 551 LFNQMRRAGVELDQVALVAALSACAELGDLTLGKWIHWYVDRTWRSKHLPVLVSLSNSLM 610
           LFNQMRRAG+ELDQVALVAALSACAELG+LTLGKWIH YV+RTWRS+HLPVLVSL+NSLM
Sbjct: 241 LFNQMRRAGMELDQVALVAALSACAELGNLTLGKWIHRYVERTWRSRHLPVLVSLNNSLM 300

Query: 611 HMYASCGVMDLAYKVFEEIPQRNTVSWSSIITGFAKQGRGEEAIR 656
           HMYASCGVMDLAYKVF+E+ +RNTVSWSSIITGFAKQG GEEAIR
Sbjct: 301 HMYASCGVMDLAYKVFKEMSRRNTVSWSSIITGFAKQGCGEEAIR 345

[Close]

BLAST of HG10020582 vs. NCBI nr
Match: XP_008444926.1 (PREDICTED: pentatricopeptide repeat-containing protein At1g05750, chloroplastic-like [Cucumis melo] >TYJ98907.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 612.1 bits (1577), Expect = 5.8e-171
Identity = 302/342 (88.30%), Postives = 317/342 (92.69%), Query Frame = 0


Query: 314 NEPAISAIGRSSRVAQQFLFSVLKCCRSVRNLAKIHAQIVVNDFAQKNYILVNLLSLYIS 373
           NE AISAIGRSSRV QQF+FSVLK C SVRNL KIHAQIVV+ F+QKNYIL +LLSLY S
Sbjct: 12  NETAISAIGRSSRVRQQFVFSVLKSCTSVRNLVKIHAQIVVSGFSQKNYILSHLLSLYTS 71

Query: 374 FGSLGSAQKVFEDINAPSTTVWNQIIRGHAGSKTPQESIALFKRMTATEVEADGFTYSFL 433
           FGSLGSAQKVFEDI APSTTVWNQII+GHA SKT +ESI LFKRMT  EVEA+ FTYSFL
Sbjct: 72  FGSLGSAQKVFEDITAPSTTVWNQIIKGHARSKTSKESIELFKRMTLAEVEANEFTYSFL 131

Query: 434 LSACVRSRLFREGEQIHGRVLANGYWSNLYVRTNLINLYANGGDGGDFDLKRARYMFDEM 493
           LS CVRSRLFREGEQIHGRVL NGYWSNLYVRTNLINLYANGG GGDFDLKRARY+FDEM
Sbjct: 132 LSGCVRSRLFREGEQIHGRVLVNGYWSNLYVRTNLINLYANGGGGGDFDLKRARYLFDEM 191

Query: 494 PDSNVVGWNSLLAGYVRSGDFDGARKVFDEMPERNVQTWTTMVAGFGQNGHCKLALSLFN 553
           PDSNVVGWNSLLAGYVR GDFDGARKVFDEMPERNV+TWT MVAGF QNG CKLALSLF+
Sbjct: 192 PDSNVVGWNSLLAGYVRRGDFDGARKVFDEMPERNVRTWTIMVAGFAQNGQCKLALSLFD 251

Query: 554 QMRRAGVELDQVALVAALSACAELGDLTLGKWIHWYVDRTWRSKHLPVLVSLSNSLMHMY 613
           QMRRAGVELDQVALVAALSACAELGDLTLGKWIH YV+RTWRS+HLPVLVSL+N+LMHMY
Sbjct: 252 QMRRAGVELDQVALVAALSACAELGDLTLGKWIHGYVERTWRSRHLPVLVSLNNALMHMY 311

Query: 614 ASCGVMDLAYKVFEEIPQRNTVSWSSIITGFAKQGRGEEAIR 656
           ASCGVMDLAYKVFEE+PQRNTVSWSSIITGFAKQG G EAIR
Sbjct: 312 ASCGVMDLAYKVFEEMPQRNTVSWSSIITGFAKQGCGVEAIR 353

[Close]

BLAST of HG10020582 vs. NCBI nr
Match: XP_004137589.1 (pentatricopeptide repeat-containing protein At1g05750, chloroplastic [Cucumis sativus])

HSP 1 Score: 604.7 bits (1558), Expect = 9.2e-169
Identity = 298/345 (86.38%), Postives = 317/345 (91.88%), Query Frame = 0


Query: 311 MQVNEPAISAIGRSSRVAQQFLFSVLKCCRSVRNLAKIHAQIVVNDFAQKNYILVNLLSL 370
           ++ N  AISAIGRSSRV QQF+FSVLK C S RNLAK HAQIVV+ F+QKNYIL +LLSL
Sbjct: 9   LRENATAISAIGRSSRVRQQFIFSVLKSCVSFRNLAKTHAQIVVSGFSQKNYILNHLLSL 68

Query: 371 YISFGSLGSAQKVFEDINAPSTTVWNQIIRGHAGSKTPQESIALFKRMTATEVEADGFTY 430
           YISFGSLGSAQKVFEDI APSTTVWNQII+GH  SKT ++SI LFKRMT   VEA+GFTY
Sbjct: 69  YISFGSLGSAQKVFEDITAPSTTVWNQIIKGHTRSKTSKKSIELFKRMTLAGVEANGFTY 128

Query: 431 SFLLSACVRSRLFREGEQIHGRVLANGYWSNLYVRTNLINLYANGGDGGDFDLKRARYMF 490
           SFLLSACVRSRLFREGEQIHGRVL NGYWSNLYVRTNLINLYANGGDGGDFDLKRA Y+F
Sbjct: 129 SFLLSACVRSRLFREGEQIHGRVLVNGYWSNLYVRTNLINLYANGGDGGDFDLKRALYLF 188

Query: 491 DEMPDSNVVGWNSLLAGYVRSGDFDGARKVFDEMPERNVQTWTTMVAGFGQNGHCKLALS 550
           DEMPDSNVVGWNSLLAGYVR GDFDGARKVFDEMPERNV+TWT MVAGF QNG CKLALS
Sbjct: 189 DEMPDSNVVGWNSLLAGYVRRGDFDGARKVFDEMPERNVRTWTIMVAGFAQNGQCKLALS 248

Query: 551 LFNQMRRAGVELDQVALVAALSACAELGDLTLGKWIHWYVDRTWRSKHLPVLVSLSNSLM 610
           LF+QMRRAGVELDQVALVAALSACAELGDLTLGKWIH YV+RTWRS+HLPVLVSL+N+L+
Sbjct: 249 LFDQMRRAGVELDQVALVAALSACAELGDLTLGKWIHGYVERTWRSRHLPVLVSLNNALI 308

Query: 611 HMYASCGVMDLAYKVFEEIPQRNTVSWSSIITGFAKQGRGEEAIR 656
           HMYASCG MDLAYK+FEEIPQRNTVSWSSIITGFAKQG G EAIR
Sbjct: 309 HMYASCGAMDLAYKLFEEIPQRNTVSWSSIITGFAKQGCGVEAIR 353

[Close]

BLAST of HG10020582 vs. NCBI nr
Match: KAG6607462.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. sororia] >KAG7037118.1 Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 591.3 bits (1523), Expect = 1.1e-164
Identity = 293/345 (84.93%), Postives = 313/345 (90.72%), Query Frame = 0


Query: 311 MQVNEPAISAIGRSSRVAQQFLFSVLKCCRSVRNLAKIHAQIVVNDFAQKNYILVNLLSL 370
           MQVNE AISAIGRSSR  QQFLFSVLKCC+SVRNL KIHAQIV +   QKN+ILVNLLSL
Sbjct: 1   MQVNETAISAIGRSSRARQQFLFSVLKCCKSVRNLTKIHAQIVTSGLTQKNFILVNLLSL 60

Query: 371 YISFGSLGSAQKVFEDINAPSTTVWNQIIRGHAGSKTPQESIALFKRMTATEVEADGFTY 430
           Y+SFGSL +AQKVFED+++PSTTVWNQIIRGHA SKTPQESI LFKRM A EVEAD FTY
Sbjct: 61  YVSFGSLRTAQKVFEDVSSPSTTVWNQIIRGHARSKTPQESIELFKRMAAAEVEADEFTY 120

Query: 431 SFLLSACVRSRLFREGEQIHGRVLANGYWSNLYVRTNLINLYANGGDGGDFDLKRARYMF 490
           SFLLSAC RSRLFREGEQIHGRVLANGY SN YVR+NLINLYAN    G FDL+RARYMF
Sbjct: 121 SFLLSACARSRLFREGEQIHGRVLANGYHSNTYVRSNLINLYAN--VAGGFDLERARYMF 180

Query: 491 DEMPDSNVVGWNSLLAGYVRSGDFDGARKVFDEMPERNVQTWTTMVAGFGQNGHCKLALS 550
           DEM + NVVGWNSLLAGYVR GDFDGARKVFDEMPERNV+TWTTMVAG  QNGHCKLALS
Sbjct: 181 DEMLERNVVGWNSLLAGYVRRGDFDGARKVFDEMPERNVRTWTTMVAGLAQNGHCKLALS 240

Query: 551 LFNQMRRAGVELDQVALVAALSACAELGDLTLGKWIHWYVDRTWRSKHLPVLVSLSNSLM 610
           +FNQMRRAGVELDQVALVAAL+ACAELGDLTLGKWIH YV+RTWRS+H P+LVSLSN+L+
Sbjct: 241 IFNQMRRAGVELDQVALVAALTACAELGDLTLGKWIHRYVERTWRSRHRPLLVSLSNALI 300

Query: 611 HMYASCGVMDLAYKVFEEIPQRNTVSWSSIITGFAKQGRGEEAIR 656
           HMYASCGVMD A KVFEE+PQRNTVSWSSIITGFAKQG GEEAIR
Sbjct: 301 HMYASCGVMDEACKVFEEMPQRNTVSWSSIITGFAKQGHGEEAIR 343

[Close]

BLAST of HG10020582 vs. NCBI nr
Match: XP_022948853.1 (pentatricopeptide repeat-containing protein At5g66520-like isoform X1 [Cucurbita moschata] >XP_022948854.1 pentatricopeptide repeat-containing protein At5g66520-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 590.1 bits (1520), Expect = 2.4e-164
Identity = 292/345 (84.64%), Postives = 312/345 (90.43%), Query Frame = 0


Query: 311 MQVNEPAISAIGRSSRVAQQFLFSVLKCCRSVRNLAKIHAQIVVNDFAQKNYILVNLLSL 370
           MQVNE AISAIGRSSR  QQFLFSVLKCC+SVRNL KIHAQIV +   QKN+ILVNLLSL
Sbjct: 1   MQVNETAISAIGRSSRARQQFLFSVLKCCKSVRNLTKIHAQIVTSGLTQKNFILVNLLSL 60

Query: 371 YISFGSLGSAQKVFEDINAPSTTVWNQIIRGHAGSKTPQESIALFKRMTATEVEADGFTY 430
           Y+SFGSL +AQKVFED+++P TTVWNQIIRGHA SKTPQESI LFKRM A EVEAD FTY
Sbjct: 61  YVSFGSLRTAQKVFEDVSSPGTTVWNQIIRGHARSKTPQESIELFKRMAAAEVEADEFTY 120

Query: 431 SFLLSACVRSRLFREGEQIHGRVLANGYWSNLYVRTNLINLYANGGDGGDFDLKRARYMF 490
           SFLLSAC RSRLFREGEQIHGRVLANGY SN YVR+NLINLYAN    G FDL+RARYMF
Sbjct: 121 SFLLSACARSRLFREGEQIHGRVLANGYHSNTYVRSNLINLYAN--VAGGFDLERARYMF 180

Query: 491 DEMPDSNVVGWNSLLAGYVRSGDFDGARKVFDEMPERNVQTWTTMVAGFGQNGHCKLALS 550
           DEM + NVVGWNSLLAGYVR GDFDGARKVFDEMPERNV+TWTTMVAG  QNGHCKLALS
Sbjct: 181 DEMLERNVVGWNSLLAGYVRRGDFDGARKVFDEMPERNVRTWTTMVAGLAQNGHCKLALS 240

Query: 551 LFNQMRRAGVELDQVALVAALSACAELGDLTLGKWIHWYVDRTWRSKHLPVLVSLSNSLM 610
           +FNQMRRAGVELDQVALVAAL+ACAELGDLTLGKWIH YV+RTWRS+H P+LVSLSN+L+
Sbjct: 241 IFNQMRRAGVELDQVALVAALTACAELGDLTLGKWIHGYVERTWRSRHRPLLVSLSNALI 300

Query: 611 HMYASCGVMDLAYKVFEEIPQRNTVSWSSIITGFAKQGRGEEAIR 656
           HMYASCGVMD A KVFEE+PQRNTVSWSSIITGFAKQG GEEAIR
Sbjct: 301 HMYASCGVMDEACKVFEEMPQRNTVSWSSIITGFAKQGHGEEAIR 343

[Close]

BLAST of HG10020582 vs. ExPASy Swiss-Prot
Match: Q43157 (Ribulose-phosphate 3-epimerase, chloroplastic OS=Spinacia oleracea OX=3562 GN=RPE PE=1 SV=1)

HSP 1 Score: 481.9 bits (1239), Expect = 1.2e-134
Identity = 246/283 (86.93%), Postives = 264/283 (93.29%), Query Frame = 0


Query: 1   MAVASLCQSTMQSKVSGFIGGLTFQK--PPLSQPSSLTFSRRRFRNVVKASARVDKYSKS 60
           M+ ASLCQST+QS+++GF GGL  +K  P  S P+SLTF+RR+ + +VKA++RVDK+SKS
Sbjct: 1   MSAASLCQSTLQSQINGFCGGLNIRKLQPSTSSPNSLTFTRRKVQTLVKATSRVDKFSKS 60

Query: 61  DIIVSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDL 120
           DIIVSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDL
Sbjct: 61  DIIVSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDL 120

Query: 121 PLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQSSTIHLHRTVNQIKSLGAKAGVVLNPAT 180
           PLDVHLMIVEPEQRVPDFIKAGADIVSVHCE +STIHLHRTVNQIKSLGAKAGVVLNP T
Sbjct: 121 PLDVHLMIVEPEQRVPDFIKAGADIVSVHCELASTIHLHRTVNQIKSLGAKAGVVLNPGT 180

Query: 181 SLSTIEYVLDVVDLVLIMSVNPGFGGQSFIESQVKKISELRRLCAEKGVNPWIEVDGGVG 240
            LSTIEYVLDVVDLVLIMSVNPGFGGQSFIESQVKKIS+LR++C EKGVNPWIEVDGGV 
Sbjct: 181 PLSTIEYVLDVVDLVLIMSVNPGFGGQSFIESQVKKISDLRKMCVEKGVNPWIEVDGGVT 240

Query: 241 PGNAYKVIEAGANALVAGSAVFGAKDYAEAIKGIKTSKRPEAV 282
           P NAYKVIEAGANALVAGSAVFGAKDYAEAIKGIK SKRPE V
Sbjct: 241 PANAYKVIEAGANALVAGSAVFGAKDYAEAIKGIKASKRPEPV 283

[Close]

BLAST of HG10020582 vs. ExPASy Swiss-Prot
Match: Q43843 (Ribulose-phosphate 3-epimerase, chloroplastic (Fragment) OS=Solanum tuberosum OX=4113 PE=1 SV=1)

HSP 1 Score: 462.6 bits (1189), Expect = 7.4e-129
Identity = 236/278 (84.89%), Postives = 256/278 (92.09%), Query Frame = 0


Query: 5   SLCQST-MQSKVSGFIGGLTFQKPPLSQPSSLTFSRRRFRNVVKASARVDKYSKSDIIVS 64
           SL  ST +QS++SGF G    QK   S P+SLTF+RRR + VV AS+RVDK+SKSDIIVS
Sbjct: 1   SLGSSTLLQSQISGFGGSQKLQKISFSNPNSLTFTRRRIQTVVNASSRVDKFSKSDIIVS 60

Query: 65  PSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVH 124
           PSILSANF+KLGEQVKA+E AGCDWIHVDVMDGRFVPNITIGPLVVD+LRP+TDLPLDVH
Sbjct: 61  PSILSANFSKLGEQVKAIEQAGCDWIHVDVMDGRFVPNITIGPLVVDSLRPITDLPLDVH 120

Query: 125 LMIVEPEQRVPDFIKAGADIVSVHCEQSSTIHLHRTVNQIKSLGAKAGVVLNPATSLSTI 184
           LMIVEP+QRVPDFIKAGADIVSVHCEQSSTIHLHRT+NQIKSLGAKAGVVLNP T L+ I
Sbjct: 121 LMIVEPDQRVPDFIKAGADIVSVHCEQSSTIHLHRTINQIKSLGAKAGVVLNPGTPLTAI 180

Query: 185 EYVLDVVDLVLIMSVNPGFGGQSFIESQVKKISELRRLCAEKGVNPWIEVDGGVGPGNAY 244
           EYVLD VDLVLIMSVNPGFGGQSFIESQVKKIS+LR++CAE+G+NPWIEVDGGVGP NAY
Sbjct: 181 EYVLDAVDLVLIMSVNPGFGGQSFIESQVKKISDLRKICAERGLNPWIEVDGGVGPKNAY 240

Query: 245 KVIEAGANALVAGSAVFGAKDYAEAIKGIKTSKRPEAV 282
           KVIEAGANALVAGSAVFGA DYAEAIKGIKTSKRPEAV
Sbjct: 241 KVIEAGANALVAGSAVFGAPDYAEAIKGIKTSKRPEAV 278

[Close]

BLAST of HG10020582 vs. ExPASy Swiss-Prot
Match: Q9SAU2 (Ribulose-5-phosphate-3-epimerase, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RPE PE=2 SV=1)

HSP 1 Score: 460.3 bits (1183), Expect = 3.7e-128
Identity = 241/280 (86.07%), Postives = 256/280 (91.43%), Query Frame = 0


Query: 2   AVASLCQSTMQSKVSGFIGGLTFQKPPLSQPSSLTFSRRRFRNVVKASARVDKYSKSDII 61
           + ASLC S+ Q  V+GF  GL  ++  L QP+S +FSRRR   +VKAS+RVD++SKSDII
Sbjct: 4   SAASLCCSSTQ--VNGF--GLRPERSLLYQPTSFSFSRRRTHGIVKASSRVDRFSKSDII 63

Query: 62  VSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLD 121
           VSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLD
Sbjct: 64  VSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLD 123

Query: 122 VHLMIVEPEQRVPDFIKAGADIVSVHCEQSSTIHLHRTVNQIKSLGAKAGVVLNPATSLS 181
           VHLMIVEPEQRVPDFIKAGADIVSVHCEQ STIHLHRTVNQIKSLGAKAGVVLNP T LS
Sbjct: 124 VHLMIVEPEQRVPDFIKAGADIVSVHCEQQSTIHLHRTVNQIKSLGAKAGVVLNPGTPLS 183

Query: 182 TIEYVLDVVDLVLIMSVNPGFGGQSFIESQVKKISELRRLCAEKGVNPWIEVDGGVGPGN 241
            IEYVLD+VDLVLIMSVNPGFGGQSFIESQVKKIS+LR++CAEKGVNPWIEVDGGV P N
Sbjct: 184 AIEYVLDMVDLVLIMSVNPGFGGQSFIESQVKKISDLRKMCAEKGVNPWIEVDGGVTPAN 243

Query: 242 AYKVIEAGANALVAGSAVFGAKDYAEAIKGIKTSKRPEAV 282
           AYKVIEAGANALVAGSAVFGAKDYAEAIKGIK SKRP AV
Sbjct: 244 AYKVIEAGANALVAGSAVFGAKDYAEAIKGIKASKRPAAV 279

[Close]

BLAST of HG10020582 vs. ExPASy Swiss-Prot
Match: Q9ZTP5 (Ribulose-phosphate 3-epimerase, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=RPE PE=1 SV=2)

HSP 1 Score: 439.5 bits (1129), Expect = 6.7e-122
Identity = 230/280 (82.14%), Postives = 247/280 (88.21%), Query Frame = 0


Query: 4   ASLCQSTMQSKVSGFIGGLTFQKPPLSQPSSLTFSRRRFRNVVKASARVDKYSKSDIIVS 63
           +SLC +    + +     L F  P           R+ FR  V+AS+RVDK+SK+DIIVS
Sbjct: 8   SSLCSTFASPRAASLGRRLAFSSP-----------RKAFR--VRASSRVDKFSKNDIIVS 67

Query: 64  PSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVH 123
           PSILSANF+KLGEQVKAVE+AGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVH
Sbjct: 68  PSILSANFSKLGEQVKAVEVAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVH 127

Query: 124 LMIVEPEQRVPDFIKAGADIVSVHCEQSSTIHLHRTVNQIKSLGAKAGVVLNPATSLSTI 183
           LMIVEPEQRVPDFIKAGADIVSVHCEQSSTIHLHRTVNQIKSLGAKAGVVLNPAT L+ I
Sbjct: 128 LMIVEPEQRVPDFIKAGADIVSVHCEQSSTIHLHRTVNQIKSLGAKAGVVLNPATPLTAI 187

Query: 184 EYVLDVVDLVLIMSVNPGFGGQSFIESQVKKISELRRLCAEKGVNPWIEVDGGVGPGNAY 243
           +YVLDVVDLVLIMSVNPGFGGQSFIESQVKKI+ELRRLCAEKGVNPWIEVDGGVGP NAY
Sbjct: 188 DYVLDVVDLVLIMSVNPGFGGQSFIESQVKKIAELRRLCAEKGVNPWIEVDGGVGPKNAY 247

Query: 244 KVIEAGANALVAGSAVFGAKDYAEAIKGIKTSKRPEAVPA 284
           KVIEAGANA+VAGSAVFGA DYAEAIKGIKTS++P AVPA
Sbjct: 248 KVIEAGANAIVAGSAVFGAPDYAEAIKGIKTSQKPVAVPA 274

[Close]

BLAST of HG10020582 vs. ExPASy Swiss-Prot
Match: P74061 (Ribulose-phosphate 3-epimerase OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN=rpe PE=1 SV=3)

HSP 1 Score: 312.0 bits (798), Expect = 1.6e-83
Identity = 153/227 (67.40%), Postives = 189/227 (83.26%), Query Frame = 0


Query: 59  DIIVSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDL 118
           +I+V+PSILSA+F++LGE++KAV+ AG DWIHVDVMDGRFVPNITIGPL+VDA+RP+T  
Sbjct: 4   NIVVAPSILSADFSRLGEEIKAVDEAGADWIHVDVMDGRFVPNITIGPLIVDAIRPLTKK 63

Query: 119 PLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQSSTIHLHRTVNQIKSLGAKAGVVLNPAT 178
            LDVHLMIVEPE+ V DF KAGADI+SVH E +++ HLHRT+ QI+ LG KAG VLNP+T
Sbjct: 64  TLDVHLMIVEPEKYVEDFAKAGADIISVHVEHNASPHLHRTLCQIRELGKKAGAVLNPST 123

Query: 179 SLSTIEYVLDVVDLVLIMSVNPGFGGQSFIESQVKKISELRRLCAEKGVNPWIEVDGGVG 238
            L  +EYVL V DL+LIMSVNPGFGGQSFI   + KI  LR++C E+G++PWIEVDGG+ 
Sbjct: 124 PLDFLEYVLPVCDLILIMSVNPGFGGQSFIPEVLPKIRALRQMCDERGLDPWIEVDGGLK 183

Query: 239 PGNAYKVIEAGANALVAGSAVFGAKDYAEAIKGIKTSKRPEAVPARV 286
           P N ++V+EAGANA+VAGSAVF A +YAEAI G++ SKRPE   A V
Sbjct: 184 PNNTWQVLEAGANAIVAGSAVFNAPNYAEAIAGVRNSKRPEPQLATV 230

[Close]

BLAST of HG10020582 vs. ExPASy TrEMBL
Match: A0A5D3BIG1 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G001040 PE=4 SV=1)

HSP 1 Score: 612.1 bits (1577), Expect = 2.8e-171
Identity = 302/342 (88.30%), Postives = 317/342 (92.69%), Query Frame = 0


Query: 314 NEPAISAIGRSSRVAQQFLFSVLKCCRSVRNLAKIHAQIVVNDFAQKNYILVNLLSLYIS 373
           NE AISAIGRSSRV QQF+FSVLK C SVRNL KIHAQIVV+ F+QKNYIL +LLSLY S
Sbjct: 12  NETAISAIGRSSRVRQQFVFSVLKSCTSVRNLVKIHAQIVVSGFSQKNYILSHLLSLYTS 71

Query: 374 FGSLGSAQKVFEDINAPSTTVWNQIIRGHAGSKTPQESIALFKRMTATEVEADGFTYSFL 433
           FGSLGSAQKVFEDI APSTTVWNQII+GHA SKT +ESI LFKRMT  EVEA+ FTYSFL
Sbjct: 72  FGSLGSAQKVFEDITAPSTTVWNQIIKGHARSKTSKESIELFKRMTLAEVEANEFTYSFL 131

Query: 434 LSACVRSRLFREGEQIHGRVLANGYWSNLYVRTNLINLYANGGDGGDFDLKRARYMFDEM 493
           LS CVRSRLFREGEQIHGRVL NGYWSNLYVRTNLINLYANGG GGDFDLKRARY+FDEM
Sbjct: 132 LSGCVRSRLFREGEQIHGRVLVNGYWSNLYVRTNLINLYANGGGGGDFDLKRARYLFDEM 191

Query: 494 PDSNVVGWNSLLAGYVRSGDFDGARKVFDEMPERNVQTWTTMVAGFGQNGHCKLALSLFN 553
           PDSNVVGWNSLLAGYVR GDFDGARKVFDEMPERNV+TWT MVAGF QNG CKLALSLF+
Sbjct: 192 PDSNVVGWNSLLAGYVRRGDFDGARKVFDEMPERNVRTWTIMVAGFAQNGQCKLALSLFD 251

Query: 554 QMRRAGVELDQVALVAALSACAELGDLTLGKWIHWYVDRTWRSKHLPVLVSLSNSLMHMY 613
           QMRRAGVELDQVALVAALSACAELGDLTLGKWIH YV+RTWRS+HLPVLVSL+N+LMHMY
Sbjct: 252 QMRRAGVELDQVALVAALSACAELGDLTLGKWIHGYVERTWRSRHLPVLVSLNNALMHMY 311

Query: 614 ASCGVMDLAYKVFEEIPQRNTVSWSSIITGFAKQGRGEEAIR 656
           ASCGVMDLAYKVFEE+PQRNTVSWSSIITGFAKQG G EAIR
Sbjct: 312 ASCGVMDLAYKVFEEMPQRNTVSWSSIITGFAKQGCGVEAIR 353

[Close]

BLAST of HG10020582 vs. ExPASy TrEMBL
Match: A0A1S3BBI0 (pentatricopeptide repeat-containing protein At1g05750, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC103488102 PE=4 SV=1)

HSP 1 Score: 612.1 bits (1577), Expect = 2.8e-171
Identity = 302/342 (88.30%), Postives = 317/342 (92.69%), Query Frame = 0


Query: 314 NEPAISAIGRSSRVAQQFLFSVLKCCRSVRNLAKIHAQIVVNDFAQKNYILVNLLSLYIS 373
           NE AISAIGRSSRV QQF+FSVLK C SVRNL KIHAQIVV+ F+QKNYIL +LLSLY S
Sbjct: 12  NETAISAIGRSSRVRQQFVFSVLKSCTSVRNLVKIHAQIVVSGFSQKNYILSHLLSLYTS 71

Query: 374 FGSLGSAQKVFEDINAPSTTVWNQIIRGHAGSKTPQESIALFKRMTATEVEADGFTYSFL 433
           FGSLGSAQKVFEDI APSTTVWNQII+GHA SKT +ESI LFKRMT  EVEA+ FTYSFL
Sbjct: 72  FGSLGSAQKVFEDITAPSTTVWNQIIKGHARSKTSKESIELFKRMTLAEVEANEFTYSFL 131

Query: 434 LSACVRSRLFREGEQIHGRVLANGYWSNLYVRTNLINLYANGGDGGDFDLKRARYMFDEM 493
           LS CVRSRLFREGEQIHGRVL NGYWSNLYVRTNLINLYANGG GGDFDLKRARY+FDEM
Sbjct: 132 LSGCVRSRLFREGEQIHGRVLVNGYWSNLYVRTNLINLYANGGGGGDFDLKRARYLFDEM 191

Query: 494 PDSNVVGWNSLLAGYVRSGDFDGARKVFDEMPERNVQTWTTMVAGFGQNGHCKLALSLFN 553
           PDSNVVGWNSLLAGYVR GDFDGARKVFDEMPERNV+TWT MVAGF QNG CKLALSLF+
Sbjct: 192 PDSNVVGWNSLLAGYVRRGDFDGARKVFDEMPERNVRTWTIMVAGFAQNGQCKLALSLFD 251

Query: 554 QMRRAGVELDQVALVAALSACAELGDLTLGKWIHWYVDRTWRSKHLPVLVSLSNSLMHMY 613
           QMRRAGVELDQVALVAALSACAELGDLTLGKWIH YV+RTWRS+HLPVLVSL+N+LMHMY
Sbjct: 252 QMRRAGVELDQVALVAALSACAELGDLTLGKWIHGYVERTWRSRHLPVLVSLNNALMHMY 311

Query: 614 ASCGVMDLAYKVFEEIPQRNTVSWSSIITGFAKQGRGEEAIR 656
           ASCGVMDLAYKVFEE+PQRNTVSWSSIITGFAKQG G EAIR
Sbjct: 312 ASCGVMDLAYKVFEEMPQRNTVSWSSIITGFAKQGCGVEAIR 353

[Close]

BLAST of HG10020582 vs. ExPASy TrEMBL
Match: A0A0A0LSS6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G038370 PE=4 SV=1)

HSP 1 Score: 604.7 bits (1558), Expect = 4.5e-169
Identity = 298/345 (86.38%), Postives = 317/345 (91.88%), Query Frame = 0


Query: 311 MQVNEPAISAIGRSSRVAQQFLFSVLKCCRSVRNLAKIHAQIVVNDFAQKNYILVNLLSL 370
           ++ N  AISAIGRSSRV QQF+FSVLK C S RNLAK HAQIVV+ F+QKNYIL +LLSL
Sbjct: 9   LRENATAISAIGRSSRVRQQFIFSVLKSCVSFRNLAKTHAQIVVSGFSQKNYILNHLLSL 68

Query: 371 YISFGSLGSAQKVFEDINAPSTTVWNQIIRGHAGSKTPQESIALFKRMTATEVEADGFTY 430
           YISFGSLGSAQKVFEDI APSTTVWNQII+GH  SKT ++SI LFKRMT   VEA+GFTY
Sbjct: 69  YISFGSLGSAQKVFEDITAPSTTVWNQIIKGHTRSKTSKKSIELFKRMTLAGVEANGFTY 128

Query: 431 SFLLSACVRSRLFREGEQIHGRVLANGYWSNLYVRTNLINLYANGGDGGDFDLKRARYMF 490
           SFLLSACVRSRLFREGEQIHGRVL NGYWSNLYVRTNLINLYANGGDGGDFDLKRA Y+F
Sbjct: 129 SFLLSACVRSRLFREGEQIHGRVLVNGYWSNLYVRTNLINLYANGGDGGDFDLKRALYLF 188

Query: 491 DEMPDSNVVGWNSLLAGYVRSGDFDGARKVFDEMPERNVQTWTTMVAGFGQNGHCKLALS 550
           DEMPDSNVVGWNSLLAGYVR GDFDGARKVFDEMPERNV+TWT MVAGF QNG CKLALS
Sbjct: 189 DEMPDSNVVGWNSLLAGYVRRGDFDGARKVFDEMPERNVRTWTIMVAGFAQNGQCKLALS 248

Query: 551 LFNQMRRAGVELDQVALVAALSACAELGDLTLGKWIHWYVDRTWRSKHLPVLVSLSNSLM 610
           LF+QMRRAGVELDQVALVAALSACAELGDLTLGKWIH YV+RTWRS+HLPVLVSL+N+L+
Sbjct: 249 LFDQMRRAGVELDQVALVAALSACAELGDLTLGKWIHGYVERTWRSRHLPVLVSLNNALI 308

Query: 611 HMYASCGVMDLAYKVFEEIPQRNTVSWSSIITGFAKQGRGEEAIR 656
           HMYASCG MDLAYK+FEEIPQRNTVSWSSIITGFAKQG G EAIR
Sbjct: 309 HMYASCGAMDLAYKLFEEIPQRNTVSWSSIITGFAKQGCGVEAIR 353

[Close]

BLAST of HG10020582 vs. ExPASy TrEMBL
Match: A0A6J1GB58 (pentatricopeptide repeat-containing protein At5g66520-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111452391 PE=4 SV=1)

HSP 1 Score: 590.1 bits (1520), Expect = 1.1e-164
Identity = 292/345 (84.64%), Postives = 312/345 (90.43%), Query Frame = 0


Query: 311 MQVNEPAISAIGRSSRVAQQFLFSVLKCCRSVRNLAKIHAQIVVNDFAQKNYILVNLLSL 370
           MQVNE AISAIGRSSR  QQFLFSVLKCC+SVRNL KIHAQIV +   QKN+ILVNLLSL
Sbjct: 1   MQVNETAISAIGRSSRARQQFLFSVLKCCKSVRNLTKIHAQIVTSGLTQKNFILVNLLSL 60

Query: 371 YISFGSLGSAQKVFEDINAPSTTVWNQIIRGHAGSKTPQESIALFKRMTATEVEADGFTY 430
           Y+SFGSL +AQKVFED+++P TTVWNQIIRGHA SKTPQESI LFKRM A EVEAD FTY
Sbjct: 61  YVSFGSLRTAQKVFEDVSSPGTTVWNQIIRGHARSKTPQESIELFKRMAAAEVEADEFTY 120

Query: 431 SFLLSACVRSRLFREGEQIHGRVLANGYWSNLYVRTNLINLYANGGDGGDFDLKRARYMF 490
           SFLLSAC RSRLFREGEQIHGRVLANGY SN YVR+NLINLYAN    G FDL+RARYMF
Sbjct: 121 SFLLSACARSRLFREGEQIHGRVLANGYHSNTYVRSNLINLYAN--VAGGFDLERARYMF 180

Query: 491 DEMPDSNVVGWNSLLAGYVRSGDFDGARKVFDEMPERNVQTWTTMVAGFGQNGHCKLALS 550
           DEM + NVVGWNSLLAGYVR GDFDGARKVFDEMPERNV+TWTTMVAG  QNGHCKLALS
Sbjct: 181 DEMLERNVVGWNSLLAGYVRRGDFDGARKVFDEMPERNVRTWTTMVAGLAQNGHCKLALS 240

Query: 551 LFNQMRRAGVELDQVALVAALSACAELGDLTLGKWIHWYVDRTWRSKHLPVLVSLSNSLM 610
           +FNQMRRAGVELDQVALVAAL+ACAELGDLTLGKWIH YV+RTWRS+H P+LVSLSN+L+
Sbjct: 241 IFNQMRRAGVELDQVALVAALTACAELGDLTLGKWIHGYVERTWRSRHRPLLVSLSNALI 300

Query: 611 HMYASCGVMDLAYKVFEEIPQRNTVSWSSIITGFAKQGRGEEAIR 656
           HMYASCGVMD A KVFEE+PQRNTVSWSSIITGFAKQG GEEAIR
Sbjct: 301 HMYASCGVMDEACKVFEEMPQRNTVSWSSIITGFAKQGHGEEAIR 343

[Close]

BLAST of HG10020582 vs. ExPASy TrEMBL
Match: A0A6J1KD31 (pentatricopeptide repeat-containing protein At5g66520-like OS=Cucurbita maxima OX=3661 GN=LOC111492775 PE=4 SV=1)

HSP 1 Score: 586.3 bits (1510), Expect = 1.6e-163
Identity = 290/345 (84.06%), Postives = 312/345 (90.43%), Query Frame = 0


Query: 311 MQVNEPAISAIGRSSRVAQQFLFSVLKCCRSVRNLAKIHAQIVVNDFAQKNYILVNLLSL 370
           MQVNE AISA+GR+SR  QQFLFSVLKCC+SVRNL +IHAQIV +   QKN+ILVNLLSL
Sbjct: 1   MQVNETAISAVGRNSRARQQFLFSVLKCCKSVRNLTEIHAQIVTSGLTQKNFILVNLLSL 60

Query: 371 YISFGSLGSAQKVFEDINAPSTTVWNQIIRGHAGSKTPQESIALFKRMTATEVEADGFTY 430
           Y+SFGSL +AQKVFED+++PSTTVWNQIIRGHA SKTPQESI LFKRMTA EVEAD FTY
Sbjct: 61  YVSFGSLRTAQKVFEDVSSPSTTVWNQIIRGHARSKTPQESIELFKRMTAAEVEADEFTY 120

Query: 431 SFLLSACVRSRLFREGEQIHGRVLANGYWSNLYVRTNLINLYANGGDGGDFDLKRARYMF 490
           SFLLSAC RSRLFREGEQIHGRVLANG  SN YVR+NLINLY N    G FDL+RARYMF
Sbjct: 121 SFLLSACARSRLFREGEQIHGRVLANGCHSNTYVRSNLINLYLN--VAGGFDLERARYMF 180

Query: 491 DEMPDSNVVGWNSLLAGYVRSGDFDGARKVFDEMPERNVQTWTTMVAGFGQNGHCKLALS 550
           DEM + NVVGWNSLLAGYVR GDFDGARKVFDEMPERNVQTWTTMVAG  QNGHCKLALS
Sbjct: 181 DEMLERNVVGWNSLLAGYVRRGDFDGARKVFDEMPERNVQTWTTMVAGLAQNGHCKLALS 240

Query: 551 LFNQMRRAGVELDQVALVAALSACAELGDLTLGKWIHWYVDRTWRSKHLPVLVSLSNSLM 610
           +FNQMRRAGVELDQVALVAALS CAELGDLTLGKWIH YV+RTWRS+H P+LVSLSN+L+
Sbjct: 241 IFNQMRRAGVELDQVALVAALSVCAELGDLTLGKWIHRYVERTWRSRHRPLLVSLSNALI 300

Query: 611 HMYASCGVMDLAYKVFEEIPQRNTVSWSSIITGFAKQGRGEEAIR 656
           HMYASCGVMD A KVFEE+PQ+NTVSWSSIITGFAKQGRGEEAIR
Sbjct: 301 HMYASCGVMDEACKVFEEMPQQNTVSWSSIITGFAKQGRGEEAIR 343

[Close]

BLAST of HG10020582 vs. TAIR 10
Match: AT5G61410.1 (D-ribulose-5-phosphate-3-epimerase )

HSP 1 Score: 460.3 bits (1183), Expect = 2.6e-129
Identity = 241/280 (86.07%), Postives = 256/280 (91.43%), Query Frame = 0


Query: 2   AVASLCQSTMQSKVSGFIGGLTFQKPPLSQPSSLTFSRRRFRNVVKASARVDKYSKSDII 61
           + ASLC S+ Q  V+GF  GL  ++  L QP+S +FSRRR   +VKAS+RVD++SKSDII
Sbjct: 4   SAASLCCSSTQ--VNGF--GLRPERSLLYQPTSFSFSRRRTHGIVKASSRVDRFSKSDII 63

Query: 62  VSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLD 121
           VSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLD
Sbjct: 64  VSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLD 123

Query: 122 VHLMIVEPEQRVPDFIKAGADIVSVHCEQSSTIHLHRTVNQIKSLGAKAGVVLNPATSLS 181
           VHLMIVEPEQRVPDFIKAGADIVSVHCEQ STIHLHRTVNQIKSLGAKAGVVLNP T LS
Sbjct: 124 VHLMIVEPEQRVPDFIKAGADIVSVHCEQQSTIHLHRTVNQIKSLGAKAGVVLNPGTPLS 183

Query: 182 TIEYVLDVVDLVLIMSVNPGFGGQSFIESQVKKISELRRLCAEKGVNPWIEVDGGVGPGN 241
            IEYVLD+VDLVLIMSVNPGFGGQSFIESQVKKIS+LR++CAEKGVNPWIEVDGGV P N
Sbjct: 184 AIEYVLDMVDLVLIMSVNPGFGGQSFIESQVKKISDLRKMCAEKGVNPWIEVDGGVTPAN 243

Query: 242 AYKVIEAGANALVAGSAVFGAKDYAEAIKGIKTSKRPEAV 282
           AYKVIEAGANALVAGSAVFGAKDYAEAIKGIK SKRP AV
Sbjct: 244 AYKVIEAGANALVAGSAVFGAKDYAEAIKGIKASKRPAAV 279

[Close]

BLAST of HG10020582 vs. TAIR 10
Match: AT5G61410.2 (D-ribulose-5-phosphate-3-epimerase )

HSP 1 Score: 460.3 bits (1183), Expect = 2.6e-129
Identity = 241/280 (86.07%), Postives = 256/280 (91.43%), Query Frame = 0


Query: 2   AVASLCQSTMQSKVSGFIGGLTFQKPPLSQPSSLTFSRRRFRNVVKASARVDKYSKSDII 61
           + ASLC S+ Q  V+GF  GL  ++  L QP+S +FSRRR   +VKAS+RVD++SKSDII
Sbjct: 4   SAASLCCSSTQ--VNGF--GLRPERSLLYQPTSFSFSRRRTHGIVKASSRVDRFSKSDII 63

Query: 62  VSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLD 121
           VSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLD
Sbjct: 64  VSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLD 123

Query: 122 VHLMIVEPEQRVPDFIKAGADIVSVHCEQSSTIHLHRTVNQIKSLGAKAGVVLNPATSLS 181
           VHLMIVEPEQRVPDFIKAGADIVSVHCEQ STIHLHRTVNQIKSLGAKAGVVLNP T LS
Sbjct: 124 VHLMIVEPEQRVPDFIKAGADIVSVHCEQQSTIHLHRTVNQIKSLGAKAGVVLNPGTPLS 183

Query: 182 TIEYVLDVVDLVLIMSVNPGFGGQSFIESQVKKISELRRLCAEKGVNPWIEVDGGVGPGN 241
            IEYVLD+VDLVLIMSVNPGFGGQSFIESQVKKIS+LR++CAEKGVNPWIEVDGGV P N
Sbjct: 184 AIEYVLDMVDLVLIMSVNPGFGGQSFIESQVKKISDLRKMCAEKGVNPWIEVDGGVTPAN 243

Query: 242 AYKVIEAGANALVAGSAVFGAKDYAEAIKGIKTSKRPEAV 282
           AYKVIEAGANALVAGSAVFGAKDYAEAIKGIK SKRP AV
Sbjct: 244 AYKVIEAGANALVAGSAVFGAKDYAEAIKGIKASKRPAAV 279

[Close]

BLAST of HG10020582 vs. TAIR 10
Match: AT5G66520.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 230.3 bits (586), Expect = 4.4e-60
Identity = 124/329 (37.69%), Postives = 192/329 (58.36%), Query Frame = 0


Query: 334 SVLKCCRSVRNLAKIHAQIVVNDFAQKNYILVNLLSLYISFGS---LGSAQKVFEDINAP 393
           S L+ C     L +IHA+++     Q +Y +   LS  IS  S   L  AQ VF+  + P
Sbjct: 19  SCLQRCSKQEELKQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGFDRP 78

Query: 394 STTVWNQIIRGHAGSKTPQESIALFKRMTATEVEADGFTYSFLLSACVRSRLFREGEQIH 453
            T +WN +IRG + S  P+ S+ L++RM  +    + +T+  LL AC     F E  QIH
Sbjct: 79  DTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIH 138

Query: 454 GRVLANGYWSNLYVRTNLINLYANGGDGGDFDLKRARYMFDEMPDSNVVGWNSLLAGYVR 513
            ++   GY +++Y   +LIN YA  G     + K A  +FD +P+ + V WNS++ GYV+
Sbjct: 139 AQITKLGYENDVYAVNSLINSYAVTG-----NFKLAHLLFDRIPEPDDVSWNSVIKGYVK 198

Query: 514 SGDFDGARKVFDEMPERNVQTWTTMVAGFGQNGHCKLALSLFNQMRRAGVELDQVALVAA 573
           +G  D A  +F +M E+N  +WTTM++G+ Q    K AL LF++M+ + VE D V+L  A
Sbjct: 199 AGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANA 258

Query: 574 LSACAELGDLTLGKWIHWYVDRTWRSKHLPVLVSLSNSLMHMYASCGVMDLAYKVFEEIP 633
           LSACA+LG L  GKWIH Y+++T     + +   L   L+ MYA CG M+ A +VF+ I 
Sbjct: 259 LSACAQLGALEQGKWIHSYLNKT----RIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIK 318

Query: 634 QRNTVSWSSIITGFAKQGRGEEAIRSMLQ 660
           +++  +W+++I+G+A  G G EAI   ++
Sbjct: 319 KKSVQAWTALISGYAYHGHGREAISKFME 338

[Close]

BLAST of HG10020582 vs. TAIR 10
Match: AT1G08070.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 219.9 bits (559), Expect = 6.0e-57
Identity = 109/324 (33.64%), Postives = 189/324 (58.33%), Query Frame = 0


Query: 334 SVLKCCRSVRNLAKIHAQIVVNDFAQKNYILVNLLSLYI---SFGSLGSAQKVFEDINAP 393
           S+L  C+++++L  IHAQ++       NY L  L+   I    F  L  A  VF+ I  P
Sbjct: 38  SLLHNCKTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQEP 97

Query: 394 STTVWNQIIRGHAGSKTPQESIALFKRMTATEVEADGFTYSFLLSACVRSRLFREGEQIH 453
           +  +WN + RGHA S  P  ++ L+  M +  +  + +T+ F+L +C +S+ F+EG+QIH
Sbjct: 98  NLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIH 157

Query: 454 GRVLANGYWSNLYVRTNLINLYANGGDGGDFDLKRARYMFDEMPDSNVVGWNSLLAGYVR 513
           G VL  G   +LYV T+LI++Y   G      L+ A  +FD+ P  +VV + +L+ GY  
Sbjct: 158 GHVLKLGCDLDLYVHTSLISMYVQNG-----RLEDAHKVFDKSPHRDVVSYTALIKGYAS 217

Query: 514 SGDFDGARKVFDEMPERNVQTWTTMVAGFGQNGHCKLALSLFNQMRRAGVELDQVALVAA 573
            G  + A+K+FDE+P ++V +W  M++G+ + G+ K AL LF  M +  V  D+  +V  
Sbjct: 218 RGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTV 277

Query: 574 LSACAELGDLTLGKWIHWYVDRTWRSKHLPVLVSLSNSLMHMYASCGVMDLAYKVFEEIP 633
           +SACA+ G + LG+ +H ++D      +L ++    N+L+ +Y+ CG ++ A  +FE +P
Sbjct: 278 VSACAQSGSIELGRQVHLWIDDHGFGSNLKIV----NALIDLYSKCGELETACGLFERLP 337

Query: 634 QRNTVSWSSIITGFAKQGRGEEAI 655
            ++ +SW+++I G+      +EA+
Sbjct: 338 YKDVISWNTLIGGYTHMNLYKEAL 352

[Close]

BLAST of HG10020582 vs. TAIR 10
Match: AT5G15300.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 204.1 bits (518), Expect = 3.4e-52
Identity = 115/337 (34.12%), Postives = 184/337 (54.60%), Query Frame = 0


Query: 339 CRSVRNLAKIHAQIVVNDFAQKNYILVNLL---SLYISFGSLGSAQKVFEDINAPSTTVW 398
           C+++R L +IHA +VVN       ++  L+   SL +  G+L  A K+F++I  P  ++ 
Sbjct: 22  CKNIRTLKQIHASMVVNGLMSNLSVVGELIYSASLSVP-GALKYAHKLFDEIPKPDVSIC 81

Query: 399 NQIIRGHAGSKTPQESIALFKRMTATEVEADGFTYSFLLSACVRSRLFREGEQIHGRVLA 458
           N ++RG A S  P+++++L+  M    V  D +T++F+L AC +      G   HG+V+ 
Sbjct: 82  NHVLRGSAQSMKPEKTVSLYTEMEKRGVSPDRYTFTFVLKACSKLEWRSNGFAFHGKVVR 141

Query: 459 NGYWSNLYVRTNLINLYANGGDGGD----FD----------------------LKRARYM 518
           +G+  N YV+  LI  +AN GD G     FD                      +  A  +
Sbjct: 142 HGFVLNEYVKNALILFHANCGDLGIASELFDDSAKAHKVAWSSMTSGYAKRGKIDEAMRL 201

Query: 519 FDEMPDSNVVGWNSLLAGYVRSGDFDGARKVFDEMPERNVQTWTTMVAGFGQNGHCKLAL 578
           FDEMP  + V WN ++ G ++  + D AR++FD   E++V TW  M++G+   G+ K AL
Sbjct: 202 FDEMPYKDQVAWNVMITGCLKCKEMDSARELFDRFTEKDVVTWNAMISGYVNCGYPKEAL 261

Query: 579 SLFNQMRRAGVELDQVALVAALSACAELGDLTLGKWIHWYVDRTWR-SKHLPVLVSLSNS 638
            +F +MR AG   D V +++ LSACA LGDL  GK +H Y+  T   S  + V   + N+
Sbjct: 262 GIFKEMRDAGEHPDVVTILSLLSACAVLGDLETGKRLHIYILETASVSSSIYVGTPIWNA 321

Query: 639 LMHMYASCGVMDLAYKVFEEIPQRNTVSWSSIITGFA 646
           L+ MYA CG +D A +VF  +  R+  +W+++I G A
Sbjct: 322 LIDMYAKCGSIDRAIEVFRGVKDRDLSTWNTLIVGLA 357

The following BLAST results are available for this feature:

BLAST of HG10020582 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038895403.1	4.1e-177	90.14	pentatricopeptide repeat-containing protein At5g66520-like [Benincasa hispida]	[more]
XP_008444926.1	5.8e-171	88.30	PREDICTED: pentatricopeptide repeat-containing protein At1g05750, chloroplastic-...	[more]
XP_004137589.1	9.2e-169	86.38	pentatricopeptide repeat-containing protein At1g05750, chloroplastic [Cucumis sa...	[more]
KAG6607462.1	1.1e-164	84.93	Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub...	[more]
XP_022948853.1	2.4e-164	84.64	pentatricopeptide repeat-containing protein At5g66520-like isoform X1 [Cucurbita...	[more]

BLAST of HG10020582 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q43157	1.2e-134	86.93	Ribulose-phosphate 3-epimerase, chloroplastic OS=Spinacia oleracea OX=3562 GN=RP...	[more]
Q43843	7.4e-129	84.89	Ribulose-phosphate 3-epimerase, chloroplastic (Fragment) OS=Solanum tuberosum OX...	[more]
Q9SAU2	3.7e-128	86.07	Ribulose-5-phosphate-3-epimerase, chloroplastic OS=Arabidopsis thaliana OX=3702 ...	[more]
Q9ZTP5	6.7e-122	82.14	Ribulose-phosphate 3-epimerase, chloroplastic OS=Oryza sativa subsp. japonica OX...	[more]
P74061	1.6e-83	67.40	Ribulose-phosphate 3-epimerase OS=Synechocystis sp. (strain PCC 6803 / Kazusa) O...	[more]

BLAST of HG10020582 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BIG1	2.8e-171	88.30	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A1S3BBI0	2.8e-171	88.30	pentatricopeptide repeat-containing protein At1g05750, chloroplastic-like OS=Cuc...	[more]
A0A0A0LSS6	4.5e-169	86.38	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G038370 PE=4 SV=1	[more]
A0A6J1GB58	1.1e-164	84.64	pentatricopeptide repeat-containing protein At5g66520-like isoform X1 OS=Cucurbi...	[more]
A0A6J1KD31	1.6e-163	84.06	pentatricopeptide repeat-containing protein At5g66520-like OS=Cucurbita maxima O...	[more]

BLAST of HG10020582 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G61410.1	2.6e-129	86.07	D-ribulose-5-phosphate-3-epimerase	[more]
AT5G61410.2	2.6e-129	86.07	D-ribulose-5-phosphate-3-epimerase	[more]
AT5G66520.1	4.4e-60	37.69	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G08070.1	6.0e-57	33.64	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT5G15300.1	3.4e-52	34.12	Pentatricopeptide repeat (PPR) superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 531..563 e-value: 3.2E-7 score: 28.1 coord: 501..529 e-value: 2.6E-7 score: 28.4
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 497..530 e-value: 4.0E-8 score: 33.3
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 531..560 e-value: 4.7E-7 score: 29.6 coord: 428..457 e-value: 0.37 score: 11.2 coord: 635..654 e-value: 0.013 score: 15.7 coord: 607..632 e-value: 0.039 score: 14.2
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 426..460 score: 8.582755
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 497..531 score: 12.199985
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 332..479 e-value: 4.4E-15 score: 57.8
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 589..660 e-value: 3.6E-11 score: 44.7 coord: 480..583 e-value: 7.6E-27 score: 95.8
IPR000056	Ribulose-phosphate 3-epimerase-like	PFAM	PF00834	Ribul_P_3_epim	coord: 62..260 e-value: 2.1E-86 score: 288.4
IPR000056	Ribulose-phosphate 3-epimerase-like	PANTHER	PTHR11749	RIBULOSE-5-PHOSPHATE-3-EPIMERASE	coord: 17..276
IPR000056	Ribulose-phosphate 3-epimerase-like	PROSITE	PS01085	RIBUL_P_3_EPIMER_1	coord: 89..103
IPR000056	Ribulose-phosphate 3-epimerase-like	PROSITE	PS01086	RIBUL_P_3_EPIMER_2	coord: 193..215
IPR000056	Ribulose-phosphate 3-epimerase-like	CDD	cd00429	RPE	coord: 61..273 e-value: 5.85354E-128 score: 374.509
IPR013785	Aldolase-type TIM barrel	GENE3D	3.20.20.70	Aldolase class I	coord: 50..279 e-value: 8.9E-97 score: 324.5
IPR026019	Ribulose-phosphate 3-epimerase	TIGRFAM	TIGR01163	TIGR01163	coord: 62..273 e-value: 6.1E-88 score: 291.6
IPR026019	Ribulose-phosphate 3-epimerase	HAMAP	MF_02227	RPE	coord: 59..275 score: 58.802513
None	No IPR available	PIRSR	PIRSR001461-3	PIRSR001461-3	coord: 61..277 e-value: 4.3E-84 score: 278.8
None	No IPR available	PIRSR	PIRSR001461-2	PIRSR001461-2	coord: 61..277 e-value: 1.3E-84 score: 280.5
None	No IPR available	PIRSR	PIRSR001461-1	PIRSR001461-1	coord: 61..277 e-value: 4.3E-84 score: 278.8
None	No IPR available	PANTHER	PTHR11749:SF13	SUBFAMILY NOT NAMED	coord: 17..276
IPR011060	Ribulose-phosphate binding barrel	SUPERFAMILY	51366	Ribulose-phoshate binding barrel	coord: 55..276

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10020582.1	HG10020582.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0044262	cellular carbohydrate metabolic process
biological_process	GO:0019323	pentose catabolic process
biological_process	GO:0009052	pentose-phosphate shunt, non-oxidative branch
biological_process	GO:0005975	carbohydrate metabolic process
biological_process	GO:0006098	pentose-phosphate shunt
cellular_component	GO:0005829	cytosol
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0005515	protein binding
molecular_function	GO:0004750	ribulose-phosphate 3-epimerase activity
molecular_function	GO:0003824	catalytic activity
molecular_function	GO:0016857	racemase and epimerase activity, acting on carbohydrates and derivatives