HG10020533 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10020533
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	Small glutamine-rich tetratricopeptide repeat-containing protein beta
Location	Chr05: 371371 .. 376033 (-)
RNA-Seq Expression	HG10020533
Synteny	HG10020533

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGTTTGATTTGGACAGTGGCTTCCCCGAATAGATACTTCTTCTTGGATTCATATCCACAACCTGAAAAAGAACAAACAAGCAAAGTTAAAGCCATGAAAAGGGGAGAGTTGATTTTGGAAGCAGTTTGTTGGTATACCAGAAAGAGAGTCAAGTGTTAAGTTTGCGTAATCTCCTTCAATGAGGAGATGATGTGGTTCCCAATTTGGTTGAAAAAATTCATCAAAGTTAGTGCAAGAAACTACAGAAGAAACGAGCAATATAGGGAAGTAGCTGAGAAACCTCATTGCTTCTGAATTTGAAAGCCATTCTCCAACCGCTATCTGATTTTAAAGAAATGGAGAATGTGACAGTGTAATACAAGTGGGATGGGAAGCAAAGTGGGGCGGCAGCTGCAAATACGTCAGCTAGCCATTACTTAGTTTTAAATAAAAGAAAGGCTATCAATCAAAGCCAGCTTTTTTAATCTTCCACTTTCACCGCACCACTCCCACACCACCCACTTTTTCACCCTAGCTTTCTTGAATTTCCACAATCATCATACATTCTAAGTTTTCATATTCATTTTGGTTTGTTTTCTTTCTAATCACTTGATGTTTTAGGCAAATTTAGCTTTACTGGCTAAACACAAATGTTATCATATTAGTAAAGAAGAAAGTTCATCTAACATTCAAGAAGAAGAAGAATAAAACGAATTTGCAAATTTACCTATGTAACGACCTAAGTTCAGGATTCGGAACCTGATGGCACCGACACTTCCTGCATCTTCTGCGACCTTTCAGCACGCTTTGTGCTCACTCACGTGCATCTTAGGAAAATTCCCAGGAGGTCACCCAATATAAGACTGTGGAGTTCTTATGATTTAGTCACCGAAAAGGAAGGTGCACCTTATCGGTATAGGTAGTAACTTTCAATTCTTTTAAGTCTTTCTTAACCATACTTTTATGTCCCCAGGATCTTCTCATTCGGATGTGATCCCGGTTCATTCATGTCCCCCTCCTAAACTTGAGGCGTTACAATCCATCACATCTACACACAAACTAAAGTAATGAATCACATGAGGACAAAATTATTGAATTTACATATTATCAATAGACCATCAATTGAAGACAAAAATATCAATATTTACAAATGTCATTTAAGTTTTTTAAGTGTCATCGTTTGTAATTAGGTATCTATGAACCGTTGTATGTAAATATTTTGTTTGTGATGTATCTCCTTGAAGAGATAAGTGAGAGTGGCACATGTATGAAAAAGTTTTGATATGTCACTTGTGTTAAGTTATCCATTTACTTTCATCATTTATCTATCACACCCTATCAACTCAACCAATATTTGTTGGGTAAATATGATATGTTATATCATTGTTTTAATAGGTCAAATTGTATAGTATATTGAATTGTAAATTAAAATATAAAAAATGCAATCAAAACTATTAAGAATTTGCAGTTTAAAATCGAAAGAATAATAATATAGCAAAGGAAAGCAGAGGGATAGAAAGGGGGAAGGAATGAAGGGAAGTGTGTGTTTCCTCTGCGCTCCTCTTCCATTTCTTCCAAACCAAACTTCCTTCTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCAATTCCATTTCTAAACCTAGCCCTATTCATGCTCACACTCACGATCAAGAGATTCGGGTTTGCACCAATCGCACTTGCCGCCGTCAAGGTTCCTTTCACACACTCGAAATTCTCAACGCCCTTGCACCTCCCACCATTACTGTCAATTCCTCTGGTTGTTTAGGAAGGTGTGGCGCTGGCCCCAACGTTGCTGTTTTGCCTGATGGATTCGTCGTCGCTCATTGTGGCACGCCTGCTCGAGCTGCCGAGGTCATCATCCAATTATCTGGTGGAGACTCAGATTCTGTTGCTATCTCAAAGAGCTTGGAGGCTCTTGCTCTGAGGAAGAGAGCTCAATGTGAGTTGGAGGACGGGAATTTCTCCCAGGCCGAGCTACTTCTTTCGCAGGTAAACTCTTCCGCCTTTTGCTGTGTGAGTGGTTTTCTACTCTTCAGTCTGAGAATTTTGTTCAGAATAATACTCTATGTATGATGCCCGGCTTCAATTTGTTGCAGGCGATAGGTTTAAAACCATGTGGAGGTATCCATATAATATTCAAGGACAGGTGTTCTACTTCTAGTTCTATGTTGTATCTTATTATATACAAATCGTGAGCTATATGTCCCTTCTTATAGTAATTTTGGTAACGATAATTGAATTTATGCCAATAAGCGTTGACAATTATTATTACTCGTTCAATTTTAAGTCGCCTAAGTTCTTCCCTCATGCTCCATGCTGTTGATAATTTATTCCTGCATCTTTCTAGCATTTGTATATTTCTTCACTTAAAAATTGTTTGCCCATGTATTTACTCAAGCAGCTGCATCCAGAAAATTTAGTTACACAGAACTACTTAAATTTTCAGGTCCATCGTAAGATTGACACTTGGAAATCATTCTGGTGCTCTCGAAGATGCAAATGAAGCTCTAAGAGTAGCTCCTCGATATCTCGAGGTGAGAAGTATTTTAACTAATCATCACGTGCATTACATTCTATCTCAAAACTAGACGTTAATTTTGAGAAAATAACTATGCTGTTACACTTCAATGAGTCTGGATTGTGAATATAATAATTATCAAAGGGGGATATTGTTTGAAACTACCAAGTTGGAGACCAGGTAGTAGTACCTCAATTAATGGACAAGGTTTACGATATATAGAGTTCCCATTTCTTCCACTCCAAGCAGATTTGAGTAGTGCAAAGCTTTAGGGGTCAAGAGCAAAAGAAAATTTGGAGGATAACAGGGAAATTTTGGCCACGAACATAAATTATAATTGTAAATTCATGGTGGGCACTTACCTAAAATTTAATATCTTAAAAGTTTTTGTAGCACCCAAATGTTGTGGAGTCTGATAGGTTGTCCCATAAGGATTAGACAACGTACGTGGAATCTGTTCTGAACACTCACAGATATGTATATATATAAAATTATGATTGTAAATTTGGAGATCAACTTTTTCTTAGGCTCCTTCAGCCTTTGTGATGCATGAATCTTTATATGTTAATATTAAAAATAAATGTTATGGGAAAAAAATCGATGGACGTGACACTCTTGGATATTAAGAATTTTAAAAAAATAGCTCTTAGTTTAAAATTCAAAAGACTGATGATGCTAAACTATAATTTAGAGGTCCTTCGAACCCTCAACAAACTAATTGAACATGCAGCCCTTTTGAGATCATTACAAATTCAAGTCCTTTAATCTAAGAAGCACGAACACTTTAGTTTGGCTAACGTGTTTGTGTCCGACATATGTCGAACACTTCGACACTTGTTGGGCACGTATCAAACACTTGTTAGTGCAACAAATGTGTTAGATATGCATTGAATACTTGTTGAGTAGACTAAAAAGACACATATATGACAATTAACTACTTTTGAGTGTGAAATACAACAAGATAAGTCTTTTAAGCATATAAATGCATCAACACATTTACTTTCAATTTTATTTTGGTATGAAAATGATATATATTTTTAAAAATGTATACTTTAATAAACGTGTCCTTGTCGTGTCGTGTCCTAGATATTTAAAATATGGCATGTCGCCGTGTTCGTGTTGTGTCATATCCGTATCCGTGCTTCTTAGCCTTTAATTGAGAAAATGTGAGAAAAAAGGATTGTAGCTCTAGAGTAGATTATCGTATTGTTCCTGTGATGTGTTTCCTAATATTCAACTTGCAGGCTTACATTTGCCAAGGTGATGCATTCATAGCTATGGACCATTTTGATTCAGCTGAGACGTCATATTCAACAGCTTTAGAAATTGATCCTTCAATTCGCCGTTCAAAGTCATTCAAGGTATTGATTCACTTAGATTTATGTTAGAGTGTGGATATAATATTAAATTTACCTTCACCCATTAGGCCATCAACTTAAGTTTTTGGGTCAATCAAGGATATAATATTAAACTTACTTTCACCTATCGACTTAACCTTTTGGGTAAATAAGTGATTTAGTACTTTGTATGAGTAGACTATGGGCAATTTCATCACTGGGACAAAAAGGGACAACCGCTTTAATCAACCAATTTTCAGGACTTTTGCTCCTTGGTTGGGATTGGCTTGGTAGAATTTTGGAGCTATTTTTCTGTTTTTTGAGGACATTTTTTTTTTAATTTAAAAAATAACTGTTTTCAAGTTGTTATTGTCACTAATGACCAACCCATAGTTCAAAACAACTTAAGCTTTCTTCCTTTAATAATCATAAGCTTGTAGATATTAACTATAAGTTCCATTTACAAGCCACTTGATAGCTTGGAAAACAAACTTGTTTCTTAAAACAGTCTCCCAAACAAGACTATTCGTTTATGAACTATTTTGGAATCCTGTTCTGATCCCAAATCAGGCACAGTTTCTGTAACGCTTGCTATAAATTCTCACTTCTCTTTCAATCATACAATGCACACCATTTTGAGTGATTTTTTCCTTGTCATTTTTGCAAAATGAGATTGAAGTCAGTTTTTGTCTAGTGCTGCTAGAATGCCGCTTTAATATTCTTCTAATATTTACGCACCATTTCTTCTATAGGCACGAGTTGCTAAACTTCAGGCGAAGCTCAGTGCTGTGAGAACACAATAA

mRNA sequence

ATGAGTTTGATTTGGACAGTGGCTTCCCCGAATAGATACTTCTTCTTGGATTCATATCCACAACCTGAAAAAGAACAAACAAGCAAAGTTAAAGCCATGAAAAGGGGAGAGTTGATTTTGGAAGCAGTTTGTTGCCCTATTCATGCTCACACTCACGATCAAGAGATTCGGGTTTGCACCAATCGCACTTGCCGCCGTCAAGGTTCCTTTCACACACTCGAAATTCTCAACGCCCTTGCACCTCCCACCATTACTGTCAATTCCTCTGGTTGTTTAGGAAGGTGTGGCGCTGGCCCCAACGTTGCTGTTTTGCCTGATGGATTCGTCGTCGCTCATTGTGGCACGCCTGCTCGAGCTGCCGAGGTCATCATCCAATTATCTGGTGGAGACTCAGATTCTGTTGCTATCTCAAAGAGCTTGGAGGCTCTTGCTCTGAGGAAGAGAGCTCAATGTGAGTTGGAGGACGGGAATTTCTCCCAGGCCGAGCTACTTCTTTCGCAGGCGATAGGTTTAAAACCATGTGGAGGTATCCATATAATATTCAAGGACAGGTCCATCGTAAGATTGACACTTGGAAATCATTCTGGTGCTCTCGAAGATGCAAATGAAGCTCTAAGAGTAGCTCCTCGATATCTCGAGGCTTACATTTGCCAAGGTGATGCATTCATAGCTATGGACCATTTTGATTCAGCTGAGACGTCATATTCAACAGCTTTAGAAATTGATCCTTCAATTCGCCGTTCAAAGTCATTCAAGGCACGAGTTGCTAAACTTCAGGCGAAGCTCAGTGCTGTGAGAACACAATAA

Coding sequence (CDS)

ATGAGTTTGATTTGGACAGTGGCTTCCCCGAATAGATACTTCTTCTTGGATTCATATCCACAACCTGAAAAAGAACAAACAAGCAAAGTTAAAGCCATGAAAAGGGGAGAGTTGATTTTGGAAGCAGTTTGTTGCCCTATTCATGCTCACACTCACGATCAAGAGATTCGGGTTTGCACCAATCGCACTTGCCGCCGTCAAGGTTCCTTTCACACACTCGAAATTCTCAACGCCCTTGCACCTCCCACCATTACTGTCAATTCCTCTGGTTGTTTAGGAAGGTGTGGCGCTGGCCCCAACGTTGCTGTTTTGCCTGATGGATTCGTCGTCGCTCATTGTGGCACGCCTGCTCGAGCTGCCGAGGTCATCATCCAATTATCTGGTGGAGACTCAGATTCTGTTGCTATCTCAAAGAGCTTGGAGGCTCTTGCTCTGAGGAAGAGAGCTCAATGTGAGTTGGAGGACGGGAATTTCTCCCAGGCCGAGCTACTTCTTTCGCAGGCGATAGGTTTAAAACCATGTGGAGGTATCCATATAATATTCAAGGACAGGTCCATCGTAAGATTGACACTTGGAAATCATTCTGGTGCTCTCGAAGATGCAAATGAAGCTCTAAGAGTAGCTCCTCGATATCTCGAGGCTTACATTTGCCAAGGTGATGCATTCATAGCTATGGACCATTTTGATTCAGCTGAGACGTCATATTCAACAGCTTTAGAAATTGATCCTTCAATTCGCCGTTCAAAGTCATTCAAGGCACGAGTTGCTAAACTTCAGGCGAAGCTCAGTGCTGTGAGAACACAATAA

Protein sequence

MSLIWTVASPNRYFFLDSYPQPEKEQTSKVKAMKRGELILEAVCCPIHAHTHDQEIRVCTNRTCRRQGSFHTLEILNALAPPTITVNSSGCLGRCGAGPNVAVLPDGFVVAHCGTPARAAEVIIQLSGGDSDSVAISKSLEALALRKRAQCELEDGNFSQAELLLSQAIGLKPCGGIHIIFKDRSIVRLTLGNHSGALEDANEALRVAPRYLEAYICQGDAFIAMDHFDSAETSYSTALEIDPSIRRSKSFKARVAKLQAKLSAVRTQ

Homology

[Close]

BLAST of HG10020533 vs. NCBI nr
Match: XP_038894326.1 (uncharacterized protein LOC120082956 [Benincasa hispida])

HSP 1 Score: 411.8 bits (1057), Expect = 4.6e-111
Identity = 213/256 (83.20%), Postives = 223/256 (87.11%), Query Frame = 0


Query: 15  FLDSYPQPEKEQTSKVKAMKRGELILEAVCCPIHA--HTHDQEIRVCTNRTCRRQGSFHT 74
           FL + P      +S   +      I + +  PIHA  HTH QEIRVCTNRTCRRQGSFH 
Sbjct: 14  FLPNQPSFSSSSSSSSSSSSSSNSISKRI--PIHAQTHTHHQEIRVCTNRTCRRQGSFHA 73

Query: 75  LEILNALAPPTITVNSSGCLGRCGAGPNVAVLPDGFVVAHCGTPARAAEVIIQLSGGDSD 134
           LEILNALAPPTITVNSSGCLGRCGAGPNVAVLPDGFVV HCGTPARAAEVIIQLSGGDSD
Sbjct: 74  LEILNALAPPTITVNSSGCLGRCGAGPNVAVLPDGFVVGHCGTPARAAEVIIQLSGGDSD 133

Query: 135 SVAISKSLEALALRKRAQCELEDGNFSQAELLLSQAIGLKPCGGIHIIFKDRSIVRLTLG 194
           SV +SKSLEALALRKRAQCELED NFSQA+LLLSQAI LKPCGGIHIIFKDRSIVRL LG
Sbjct: 134 SVGVSKSLEALALRKRAQCELEDRNFSQADLLLSQAIDLKPCGGIHIIFKDRSIVRLALG 193

Query: 195 NHSGALEDANEALRVAPRYLEAYICQGDAFIAMDHFDSAETSYSTALEIDPSIRRSKSFK 254
           NHSGALEDANEALR+AP YLEAYICQGDA +AM+HFDSAETSYSTALEIDPSIRRSKSFK
Sbjct: 194 NHSGALEDANEALRIAPHYLEAYICQGDALLAMNHFDSAETSYSTALEIDPSIRRSKSFK 253

Query: 255 ARVAKLQAKLSAVRTQ 269
           ARVAKLQ KLSAVRTQ
Sbjct: 254 ARVAKLQEKLSAVRTQ 267

[Close]

BLAST of HG10020533 vs. NCBI nr
Match: XP_004137391.1 (uncharacterized protein LOC101213093 [Cucumis sativus] >XP_031740366.1 uncharacterized protein LOC101213093 [Cucumis sativus] >KGN63963.1 hypothetical protein Csa_013052 [Cucumis sativus])

HSP 1 Score: 403.7 bits (1036), Expect = 1.3e-108
Identity = 204/222 (91.89%), Postives = 209/222 (94.14%), Query Frame = 0


Query: 47  IHAHTHDQEIRVCTNRTCRRQGSFHTLEILNALAPPTITVNSSGCLGRCGAGPNVAVLPD 106
           IHA TH QEIRVCTNRTCRRQGSFH LEILNALAPP I VN SGCLG+CGAGPNVAVLPD
Sbjct: 36  IHAQTHHQEIRVCTNRTCRRQGSFHALEILNALAPPNIVVNPSGCLGKCGAGPNVAVLPD 95

Query: 107 GFVVAHCGTPARAAEVIIQLSGGDSDSVAISKSLEALALRKRAQCELEDGNFSQAELLLS 166
           GFVV HCGTPARAA++IIQLSG DSDSV ISKSLEALALRKRAQCELEDGNFSQAELLLS
Sbjct: 96  GFVVGHCGTPARAADLIIQLSGQDSDSVGISKSLEALALRKRAQCELEDGNFSQAELLLS 155

Query: 167 QAIGLKPCGGIHIIFKDRSIVRLTLGNHSGALEDANEALRVAPRYLEAYICQGDAFIAMD 226
           QAI LKPCGGIHIIFKDRSIVRL LGNHSGALEDANEALRVAP+YLEAYICQGDAF+AMD
Sbjct: 156 QAIDLKPCGGIHIIFKDRSIVRLALGNHSGALEDANEALRVAPQYLEAYICQGDAFLAMD 215

Query: 227 HFDSAETSYSTALEIDPSIRRSKSFKARVAKLQAKLSAVRTQ 269
           HFDSAE SYSTALEIDPSIRRSKSFKARVAKLQ KLSAVRTQ
Sbjct: 216 HFDSAEISYSTALEIDPSIRRSKSFKARVAKLQEKLSAVRTQ 257

[Close]

BLAST of HG10020533 vs. NCBI nr
Match: XP_008437609.1 (PREDICTED: tetratricopeptide repeat protein 1 [Cucumis melo])

HSP 1 Score: 390.2 bits (1001), Expect = 1.4e-104
Identity = 197/222 (88.74%), Postives = 206/222 (92.79%), Query Frame = 0


Query: 47  IHAHTHDQEIRVCTNRTCRRQGSFHTLEILNALAPPTITVNSSGCLGRCGAGPNVAVLPD 106
           IHA TH QEIRVCTNRTCRRQGSF  LEIL+ALAPPTI VN SGCLG+CGAGPNVAVLPD
Sbjct: 36  IHAQTHHQEIRVCTNRTCRRQGSFLALEILSALAPPTIVVNPSGCLGKCGAGPNVAVLPD 95

Query: 107 GFVVAHCGTPARAAEVIIQLSGGDSDSVAISKSLEALALRKRAQCELEDGNFSQAELLLS 166
           GFV+ HCGTPARAA++IIQLSG DSDSV +SKSLEALALRKRAQCELEDGNFSQAELLLS
Sbjct: 96  GFVIGHCGTPARAADLIIQLSGRDSDSVGVSKSLEALALRKRAQCELEDGNFSQAELLLS 155

Query: 167 QAIGLKPCGGIHIIFKDRSIVRLTLGNHSGALEDANEALRVAPRYLEAYICQGDAFIAMD 226
           QAI L PCGGIHIIFKDRS+VRL LGNHSGALEDANEALRVAP+YLEAYICQGD F+AMD
Sbjct: 156 QAIDLIPCGGIHIIFKDRSVVRLALGNHSGALEDANEALRVAPQYLEAYICQGDVFLAMD 215

Query: 227 HFDSAETSYSTALEIDPSIRRSKSFKARVAKLQAKLSAVRTQ 269
            FDSAE SYSTALEIDPSIRRSKSFKARVAKLQ KLSAVRTQ
Sbjct: 216 KFDSAEISYSTALEIDPSIRRSKSFKARVAKLQEKLSAVRTQ 257

[Close]

BLAST of HG10020533 vs. NCBI nr
Match: XP_022923908.1 (small glutamine-rich tetratricopeptide repeat-containing protein beta isoform X1 [Cucurbita moschata])

HSP 1 Score: 376.7 bits (966), Expect = 1.7e-100
Identity = 191/223 (85.65%), Postives = 206/223 (92.38%), Query Frame = 0


Query: 46  PIHAHTHDQEIRVCTNRTCRRQGSFHTLEILNALAPPTITVNSSGCLGRCGAGPNVAVLP 105
           PI A   +QEIRVCTNRTCRRQGSF TLE L+ALAPPTITVN SGCLG+CGAGPNVAVLP
Sbjct: 30  PIRA--QNQEIRVCTNRTCRRQGSFQTLETLSALAPPTITVNPSGCLGKCGAGPNVAVLP 89

Query: 106 DGFVVAHCGTPARAAEVIIQLSGGDSDSVAISKSLEALALRKRAQCELEDGNFSQAELLL 165
           DGFVV HC TPARAAEVI+QLSGG SDS+ +SKSLEALALRKRA+CE+EDGNFSQA+LLL
Sbjct: 90  DGFVVGHCATPARAAEVIMQLSGGVSDSLGVSKSLEALALRKRAECEVEDGNFSQADLLL 149

Query: 166 SQAIGLKPCGGIHIIFKDRSIVRLTLGNHSGALEDANEALRVAPRYLEAYICQGDAFIAM 225
           S+AI LKPCGGIHIIFKDRSIVRL LGNH+GALEDANEALRVAPRY EAYICQGD F++M
Sbjct: 150 SKAIELKPCGGIHIIFKDRSIVRLALGNHAGALEDANEALRVAPRYPEAYICQGDVFLSM 209

Query: 226 DHFDSAETSYSTALEIDPSIRRSKSFKARVAKLQAKLSAVRTQ 269
           DHFDSAE SYSTALEI+PSIRRSKSFKARVAKLQ KL+AVRTQ
Sbjct: 210 DHFDSAEMSYSTALEIEPSIRRSKSFKARVAKLQEKLNAVRTQ 250

[Close]

BLAST of HG10020533 vs. NCBI nr
Match: XP_023519354.1 (small glutamine-rich tetratricopeptide repeat-containing protein beta [Cucurbita pepo subsp. pepo])

HSP 1 Score: 375.2 bits (962), Expect = 4.8e-100
Identity = 191/223 (85.65%), Postives = 205/223 (91.93%), Query Frame = 0


Query: 46  PIHAHTHDQEIRVCTNRTCRRQGSFHTLEILNALAPPTITVNSSGCLGRCGAGPNVAVLP 105
           PI A   +QEIRVCTNRTCRRQGSF TLE L+ALAPPTITVN SGCLG+CGAGPNVAVLP
Sbjct: 30  PIRA--QNQEIRVCTNRTCRRQGSFQTLETLSALAPPTITVNPSGCLGKCGAGPNVAVLP 89

Query: 106 DGFVVAHCGTPARAAEVIIQLSGGDSDSVAISKSLEALALRKRAQCELEDGNFSQAELLL 165
           DGFVV HC TPARAAEVI+QLSGG SDS+ +SKSLEALAL KRA+CE+EDGNFSQA+LLL
Sbjct: 90  DGFVVGHCATPARAAEVIMQLSGGVSDSLGVSKSLEALALWKRAECEVEDGNFSQADLLL 149

Query: 166 SQAIGLKPCGGIHIIFKDRSIVRLTLGNHSGALEDANEALRVAPRYLEAYICQGDAFIAM 225
           S+AI LKPCGGIHIIFKDRSIVRL LGNH+GALEDANEALRVAPRY EAYICQGD F++M
Sbjct: 150 SKAIELKPCGGIHIIFKDRSIVRLALGNHAGALEDANEALRVAPRYPEAYICQGDVFLSM 209

Query: 226 DHFDSAETSYSTALEIDPSIRRSKSFKARVAKLQAKLSAVRTQ 269
           DHFDSAE SYSTALEIDPSIRRSKSFKARVAKLQ KL+AVRTQ
Sbjct: 210 DHFDSAEMSYSTALEIDPSIRRSKSFKARVAKLQEKLNAVRTQ 250

[Close]

BLAST of HG10020533 vs. ExPASy Swiss-Prot
Match: Q9STH1 (Hsp70-Hsp90 organizing protein 3 OS=Arabidopsis thaliana OX=3702 GN=HOP3 PE=2 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 2.6e-08
Identity = 34/105 (32.38%), Postives = 52/105 (49.52%), Query Frame = 0


Query: 146 RKRAQCELEDGNFSQAELLLSQAIGLKPCGGIHIIFKDRSIVRLTLGNHSGALEDANEAL 205
           + +       G+++ A    ++AI L P    HI++ +RS    +L  +  AL DA + +
Sbjct: 6   KSKGNAAFSSGDYATAITHFTEAINLSPTN--HILYSNRSASYASLHRYEEALSDAKKTI 65

Query: 206 RVAPRYLEAYICQGDAFIAMDHFDSAETSYSTALEIDPSIRRSKS 251
            + P + + Y   G AFI +  FD A  SY   LEIDPS    KS
Sbjct: 66  ELKPDWSKGYSRLGAAFIGLSKFDEAVDSYKKGLEIDPSNEMLKS 108

[Close]

BLAST of HG10020533 vs. ExPASy Swiss-Prot
Match: Q9LNB6 (Hsp70-Hsp90 organizing protein 1 OS=Arabidopsis thaliana OX=3702 GN=HOP1 PE=2 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 1.7e-07
Identity = 32/121 (26.45%), Postives = 65/121 (53.72%), Query Frame = 0


Query: 146 RKRAQCELEDGNFSQAELLLSQAIGLKPCGGIHIIFKDRSIVRLTLGNHSGALEDANEAL 205
           + +       G+F+ A    ++AI L P    H++F +RS    +L  ++ AL DA E +
Sbjct: 6   KAKGNAAFSSGDFTTAINHFTEAIALAPTN--HVLFSNRSAAHASLHQYAEALSDAKETI 65

Query: 206 RVAPRYLEAYICQGDAFIAMDHFDSAETSYSTALEIDPSIRRSKSFKARVAKLQAKLSAV 265
           ++ P + + Y   G A + ++ F+ A T+Y   L++DP+   +++ K+ +A  +A ++  
Sbjct: 66  KLKPYWPKGYSRLGAAHLGLNQFELAVTAYKKGLDVDPT---NEALKSGLADAEASVARS 121

Query: 266 R 267
           R
Sbjct: 126 R 121

[Close]

BLAST of HG10020533 vs. ExPASy Swiss-Prot
Match: Q96EQ0 (Small glutamine-rich tetratricopeptide repeat-containing protein beta OS=Homo sapiens OX=9606 GN=SGTB PE=1 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 2.9e-07
Identity = 34/121 (28.10%), Postives = 67/121 (55.37%), Query Frame = 0


Query: 145 LRKRAQCELEDGNFSQAELLLSQAIGLKPCGGIHIIFKDRSIVRLTLGNHSGALEDANEA 204
           L+      +++ N++ A    +QAI L P   ++  + +R+  +  LG+++ A++D  +A
Sbjct: 88  LKDEGNNHMKEENYAAAVDCYTQAIELDPNNAVY--YCNRAAAQSKLGHYTDAIKDCEKA 147

Query: 205 LRVAPRYLEAYICQGDAFIAMDHFDSAETSYSTALEIDPSIRRSKSFKARVAKLQAKLSA 264
           + +  +Y +AY   G A  A++ F+ A TSY  AL++DP    + S+K+ +   + KL  
Sbjct: 148 IAIDSKYSKAYGRMGLALTALNKFEEAVTSYQKALDLDP---ENDSYKSNLKIAEQKLRE 203

Query: 265 V 266
           V
Sbjct: 208 V 203

[Close]

BLAST of HG10020533 vs. ExPASy Swiss-Prot
Match: Q8VD33 (Small glutamine-rich tetratricopeptide repeat-containing protein beta OS=Mus musculus OX=10090 GN=Sgtb PE=1 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 6.5e-07
Identity = 34/121 (28.10%), Postives = 66/121 (54.55%), Query Frame = 0


Query: 145 LRKRAQCELEDGNFSQAELLLSQAIGLKPCGGIHIIFKDRSIVRLTLGNHSGALEDANEA 204
           L+      +++ N++ A    +QAI L P   ++  + +R+  +  L +++ A++D  +A
Sbjct: 88  LKDEGNNHMKEENYAAAVDCYTQAIELDPNNAVY--YCNRAAAQSKLSHYTDAIKDCEKA 147

Query: 205 LRVAPRYLEAYICQGDAFIAMDHFDSAETSYSTALEIDPSIRRSKSFKARVAKLQAKLSA 264
           + +  +Y +AY   G A  AM+ F+ A TSY  AL++DP    + S+K+ +   + KL  
Sbjct: 148 IAIDSKYSKAYGRMGLALTAMNKFEEAVTSYQKALDLDP---ENDSYKSNLKIAEQKLRE 203

Query: 265 V 266
           V
Sbjct: 208 V 203

[Close]

BLAST of HG10020533 vs. ExPASy Swiss-Prot
Match: Q80W98 (Small glutamine-rich tetratricopeptide repeat-containing protein beta OS=Rattus norvegicus OX=10116 GN=Sgtb PE=1 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 6.5e-07
Identity = 34/121 (28.10%), Postives = 66/121 (54.55%), Query Frame = 0


Query: 145 LRKRAQCELEDGNFSQAELLLSQAIGLKPCGGIHIIFKDRSIVRLTLGNHSGALEDANEA 204
           L+      +++ N++ A    +QAI L P   ++  + +R+  +  L +++ A++D  +A
Sbjct: 88  LKDEGNNHMKEENYAAAVDCYTQAIELDPNNAVY--YCNRAAAQSKLSHYTDAIKDCEKA 147

Query: 205 LRVAPRYLEAYICQGDAFIAMDHFDSAETSYSTALEIDPSIRRSKSFKARVAKLQAKLSA 264
           + +  +Y +AY   G A  AM+ F+ A TSY  AL++DP    + S+K+ +   + KL  
Sbjct: 148 IAIDSKYSKAYGRMGLALTAMNKFEEAVTSYQKALDLDP---ENDSYKSNLKIAEQKLRE 203

Query: 265 V 266
           V
Sbjct: 208 V 203

[Close]

BLAST of HG10020533 vs. ExPASy TrEMBL
Match: A0A0A0LQA2 (TPR_REGION domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G031840 PE=4 SV=1)

HSP 1 Score: 403.7 bits (1036), Expect = 6.1e-109
Identity = 204/222 (91.89%), Postives = 209/222 (94.14%), Query Frame = 0


Query: 47  IHAHTHDQEIRVCTNRTCRRQGSFHTLEILNALAPPTITVNSSGCLGRCGAGPNVAVLPD 106
           IHA TH QEIRVCTNRTCRRQGSFH LEILNALAPP I VN SGCLG+CGAGPNVAVLPD
Sbjct: 36  IHAQTHHQEIRVCTNRTCRRQGSFHALEILNALAPPNIVVNPSGCLGKCGAGPNVAVLPD 95

Query: 107 GFVVAHCGTPARAAEVIIQLSGGDSDSVAISKSLEALALRKRAQCELEDGNFSQAELLLS 166
           GFVV HCGTPARAA++IIQLSG DSDSV ISKSLEALALRKRAQCELEDGNFSQAELLLS
Sbjct: 96  GFVVGHCGTPARAADLIIQLSGQDSDSVGISKSLEALALRKRAQCELEDGNFSQAELLLS 155

Query: 167 QAIGLKPCGGIHIIFKDRSIVRLTLGNHSGALEDANEALRVAPRYLEAYICQGDAFIAMD 226
           QAI LKPCGGIHIIFKDRSIVRL LGNHSGALEDANEALRVAP+YLEAYICQGDAF+AMD
Sbjct: 156 QAIDLKPCGGIHIIFKDRSIVRLALGNHSGALEDANEALRVAPQYLEAYICQGDAFLAMD 215

Query: 227 HFDSAETSYSTALEIDPSIRRSKSFKARVAKLQAKLSAVRTQ 269
           HFDSAE SYSTALEIDPSIRRSKSFKARVAKLQ KLSAVRTQ
Sbjct: 216 HFDSAEISYSTALEIDPSIRRSKSFKARVAKLQEKLSAVRTQ 257

[Close]

BLAST of HG10020533 vs. ExPASy TrEMBL
Match: A0A1S3AUF9 (tetratricopeptide repeat protein 1 OS=Cucumis melo OX=3656 GN=LOC103482942 PE=4 SV=1)

HSP 1 Score: 390.2 bits (1001), Expect = 7.0e-105
Identity = 197/222 (88.74%), Postives = 206/222 (92.79%), Query Frame = 0


Query: 47  IHAHTHDQEIRVCTNRTCRRQGSFHTLEILNALAPPTITVNSSGCLGRCGAGPNVAVLPD 106
           IHA TH QEIRVCTNRTCRRQGSF  LEIL+ALAPPTI VN SGCLG+CGAGPNVAVLPD
Sbjct: 36  IHAQTHHQEIRVCTNRTCRRQGSFLALEILSALAPPTIVVNPSGCLGKCGAGPNVAVLPD 95

Query: 107 GFVVAHCGTPARAAEVIIQLSGGDSDSVAISKSLEALALRKRAQCELEDGNFSQAELLLS 166
           GFV+ HCGTPARAA++IIQLSG DSDSV +SKSLEALALRKRAQCELEDGNFSQAELLLS
Sbjct: 96  GFVIGHCGTPARAADLIIQLSGRDSDSVGVSKSLEALALRKRAQCELEDGNFSQAELLLS 155

Query: 167 QAIGLKPCGGIHIIFKDRSIVRLTLGNHSGALEDANEALRVAPRYLEAYICQGDAFIAMD 226
           QAI L PCGGIHIIFKDRS+VRL LGNHSGALEDANEALRVAP+YLEAYICQGD F+AMD
Sbjct: 156 QAIDLIPCGGIHIIFKDRSVVRLALGNHSGALEDANEALRVAPQYLEAYICQGDVFLAMD 215

Query: 227 HFDSAETSYSTALEIDPSIRRSKSFKARVAKLQAKLSAVRTQ 269
            FDSAE SYSTALEIDPSIRRSKSFKARVAKLQ KLSAVRTQ
Sbjct: 216 KFDSAEISYSTALEIDPSIRRSKSFKARVAKLQEKLSAVRTQ 257

[Close]

BLAST of HG10020533 vs. ExPASy TrEMBL
Match: A0A6J1EAV3 (small glutamine-rich tetratricopeptide repeat-containing protein beta isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111431489 PE=4 SV=1)

HSP 1 Score: 376.7 bits (966), Expect = 8.0e-101
Identity = 191/223 (85.65%), Postives = 206/223 (92.38%), Query Frame = 0


Query: 46  PIHAHTHDQEIRVCTNRTCRRQGSFHTLEILNALAPPTITVNSSGCLGRCGAGPNVAVLP 105
           PI A   +QEIRVCTNRTCRRQGSF TLE L+ALAPPTITVN SGCLG+CGAGPNVAVLP
Sbjct: 30  PIRA--QNQEIRVCTNRTCRRQGSFQTLETLSALAPPTITVNPSGCLGKCGAGPNVAVLP 89

Query: 106 DGFVVAHCGTPARAAEVIIQLSGGDSDSVAISKSLEALALRKRAQCELEDGNFSQAELLL 165
           DGFVV HC TPARAAEVI+QLSGG SDS+ +SKSLEALALRKRA+CE+EDGNFSQA+LLL
Sbjct: 90  DGFVVGHCATPARAAEVIMQLSGGVSDSLGVSKSLEALALRKRAECEVEDGNFSQADLLL 149

Query: 166 SQAIGLKPCGGIHIIFKDRSIVRLTLGNHSGALEDANEALRVAPRYLEAYICQGDAFIAM 225
           S+AI LKPCGGIHIIFKDRSIVRL LGNH+GALEDANEALRVAPRY EAYICQGD F++M
Sbjct: 150 SKAIELKPCGGIHIIFKDRSIVRLALGNHAGALEDANEALRVAPRYPEAYICQGDVFLSM 209

Query: 226 DHFDSAETSYSTALEIDPSIRRSKSFKARVAKLQAKLSAVRTQ 269
           DHFDSAE SYSTALEI+PSIRRSKSFKARVAKLQ KL+AVRTQ
Sbjct: 210 DHFDSAEMSYSTALEIEPSIRRSKSFKARVAKLQEKLNAVRTQ 250

[Close]

BLAST of HG10020533 vs. ExPASy TrEMBL
Match: A0A6J1KQA5 (uncharacterized protein LOC111495518 OS=Cucurbita maxima OX=3661 GN=LOC111495518 PE=4 SV=1)

HSP 1 Score: 367.5 bits (942), Expect = 4.9e-98
Identity = 187/223 (83.86%), Postives = 203/223 (91.03%), Query Frame = 0


Query: 46  PIHAHTHDQEIRVCTNRTCRRQGSFHTLEILNALAPPTITVNSSGCLGRCGAGPNVAVLP 105
           PI A   +QEIRVCTNRTCRRQGSF TLE L ALAPPTITVN SGCLG+CGAGPNVAV P
Sbjct: 30  PIRA--QNQEIRVCTNRTCRRQGSFQTLETLCALAPPTITVNPSGCLGKCGAGPNVAVFP 89

Query: 106 DGFVVAHCGTPARAAEVIIQLSGGDSDSVAISKSLEALALRKRAQCELEDGNFSQAELLL 165
           DGFVV HC TPARAAEVI++LSGG SDS+ +SKSLEALALRKRA+CE+EDGNFSQA+LLL
Sbjct: 90  DGFVVGHCATPARAAEVIMRLSGGVSDSLGVSKSLEALALRKRAECEVEDGNFSQADLLL 149

Query: 166 SQAIGLKPCGGIHIIFKDRSIVRLTLGNHSGALEDANEALRVAPRYLEAYICQGDAFIAM 225
           S+AI LKPCGGIHIIFKDRSIVRL LGN++ ALEDANEALRVAP+Y EAYICQGD F++M
Sbjct: 150 SKAIELKPCGGIHIIFKDRSIVRLALGNYAAALEDANEALRVAPQYPEAYICQGDVFLSM 209

Query: 226 DHFDSAETSYSTALEIDPSIRRSKSFKARVAKLQAKLSAVRTQ 269
           DHFDSAE SYSTALEIDPSIRRSKSFKARVAKLQ KL+AVRTQ
Sbjct: 210 DHFDSAEISYSTALEIDPSIRRSKSFKARVAKLQEKLNAVRTQ 250

[Close]

BLAST of HG10020533 vs. ExPASy TrEMBL
Match: A0A6J1C6P2 (sperm-associated antigen 1 OS=Momordica charantia OX=3673 GN=LOC111008751 PE=4 SV=1)

HSP 1 Score: 359.8 bits (922), Expect = 1.0e-95
Identity = 182/222 (81.98%), Postives = 198/222 (89.19%), Query Frame = 0


Query: 46  PIHAHTHDQEIRVCTNRTCRRQGSFHTLEILNALAPPTITVNSSGCLGRCGAGPNVAVLP 105
           PI  H H+QEIRVCTNRTCRRQGSF TLE LN LAPPTITVNS GCLG+CGAGPNVAVLP
Sbjct: 35  PIRFHAHNQEIRVCTNRTCRRQGSFQTLETLNGLAPPTITVNSCGCLGKCGAGPNVAVLP 94

Query: 106 DGFVVAHCGTPARAAEVIIQL--SGGDSDSVAISKSLEALALRKRAQCELEDGNFSQAEL 165
           DGFVV HCGTPARAAE+++ L  SGG  D +++SKSLEALALRKRA+ E+E+G+FSQA+L
Sbjct: 95  DGFVVGHCGTPARAAELMMGLSGSGGGYDPLSVSKSLEALALRKRAETEMEEGDFSQADL 154

Query: 166 LLSQAIGLKPCGGIHIIFKDRSIVRLTLGNHSGALEDANEALRVAPRYLEAYICQGDAFI 225
            LSQAI LKPCGGIHIIFKDRSIVRL  GN+SGALEDANEAL+VAP+Y E YICQGDAF 
Sbjct: 155 HLSQAIELKPCGGIHIIFKDRSIVRLAQGNYSGALEDANEALKVAPQYTEGYICQGDAFF 214

Query: 226 AMDHFDSAETSYSTALEIDPSIRRSKSFKARVAKLQAKLSAV 266
           AMDHFDSAETSYSTALEIDPSIRRSKSFKARV KLQ KLSAV
Sbjct: 215 AMDHFDSAETSYSTALEIDPSIRRSKSFKARVDKLQEKLSAV 256

[Close]

BLAST of HG10020533 vs. TAIR 10
Match: AT3G17670.1 (tetratricopeptide repeat (TPR)-containing protein )

HSP 1 Score: 246.9 bits (629), Expect = 1.8e-65
Identity = 122/212 (57.55%), Postives = 155/212 (73.11%), Query Frame = 0


Query: 54  QEIRVCTNRTCRRQGSFHTLEILNALAPPTITVNSSGCLGRCGAGPNVAVLPDGFVVAHC 113
           +EIRVCTNRTCRRQGSF  LE L ALAPP + V    CLGRCG+GPN+  LP G ++ HC
Sbjct: 19  KEIRVCTNRTCRRQGSFQILETLTALAPPELRVTHCACLGRCGSGPNLVALPQGLILRHC 78

Query: 114 GTPARAAEVIIQLSGGD---SDSVAISKSLEALALRKRAQCELEDGNFSQAELLLSQAIG 173
            TP+RAAE++  L G     S S A++ +L ALAL   A  +++ GNFS+AE LL+QA+ 
Sbjct: 79  ATPSRAAEILFSLCGDGREASSSSAVTDALTALALTNNALSQIDAGNFSEAEALLTQALE 138

Query: 174 LKPCGGIHIIFKDRSIVRLTLGNHSGALEDANEALRVAPRYLEAYICQGDAFIAMDHFDS 233
           LKP GG+H IFK RS+ +L + ++SGALED ++AL +AP Y E YICQGD ++A   +D 
Sbjct: 139 LKPYGGLHRIFKHRSVAKLGMLDYSGALEDISQALALAPNYSEPYICQGDVYVAKGQYDL 198

Query: 234 AETSYSTALEIDPSIRRSKSFKARVAKLQAKL 263
           AE SY T LEIDPS+RRSK FKAR+AKLQ K+
Sbjct: 199 AEKSYLTCLEIDPSLRRSKPFKARIAKLQQKV 230

[Close]

BLAST of HG10020533 vs. TAIR 10
Match: AT3G17670.2 (tetratricopeptide repeat (TPR)-containing protein )

HSP 1 Score: 246.9 bits (629), Expect = 1.8e-65
Identity = 122/212 (57.55%), Postives = 155/212 (73.11%), Query Frame = 0


Query: 54  QEIRVCTNRTCRRQGSFHTLEILNALAPPTITVNSSGCLGRCGAGPNVAVLPDGFVVAHC 113
           +EIRVCTNRTCRRQGSF  LE L ALAPP + V    CLGRCG+GPN+  LP G ++ HC
Sbjct: 19  KEIRVCTNRTCRRQGSFQILETLTALAPPELRVTHCACLGRCGSGPNLVALPQGLILRHC 78

Query: 114 GTPARAAEVIIQLSGGD---SDSVAISKSLEALALRKRAQCELEDGNFSQAELLLSQAIG 173
            TP+RAAE++  L G     S S A++ +L ALAL   A  +++ GNFS+AE LL+QA+ 
Sbjct: 79  ATPSRAAEILFSLCGDGREASSSSAVTDALTALALTNNALSQIDAGNFSEAEALLTQALE 138

Query: 174 LKPCGGIHIIFKDRSIVRLTLGNHSGALEDANEALRVAPRYLEAYICQGDAFIAMDHFDS 233
           LKP GG+H IFK RS+ +L + ++SGALED ++AL +AP Y E YICQGD ++A   +D 
Sbjct: 139 LKPYGGLHRIFKHRSVAKLGMLDYSGALEDISQALALAPNYSEPYICQGDVYVAKGQYDL 198

Query: 234 AETSYSTALEIDPSIRRSKSFKARVAKLQAKL 263
           AE SY T LEIDPS+RRSK FKAR+AKLQ K+
Sbjct: 199 AEKSYLTCLEIDPSLRRSKPFKARIAKLQQKV 230

[Close]

BLAST of HG10020533 vs. TAIR 10
Match: AT4G12400.1 (stress-inducible protein, putative )

HSP 1 Score: 60.8 bits (146), Expect = 1.9e-09
Identity = 34/105 (32.38%), Postives = 52/105 (49.52%), Query Frame = 0


Query: 146 RKRAQCELEDGNFSQAELLLSQAIGLKPCGGIHIIFKDRSIVRLTLGNHSGALEDANEAL 205
           + +       G+++ A    ++AI L P    HI++ +RS    +L  +  AL DA + +
Sbjct: 6   KSKGNAAFSSGDYATAITHFTEAINLSPTN--HILYSNRSASYASLHRYEEALSDAKKTI 65

Query: 206 RVAPRYLEAYICQGDAFIAMDHFDSAETSYSTALEIDPSIRRSKS 251
            + P + + Y   G AFI +  FD A  SY   LEIDPS    KS
Sbjct: 66  ELKPDWSKGYSRLGAAFIGLSKFDEAVDSYKKGLEIDPSNEMLKS 108

[Close]

BLAST of HG10020533 vs. TAIR 10
Match: AT4G12400.2 (stress-inducible protein, putative )

HSP 1 Score: 60.8 bits (146), Expect = 1.9e-09
Identity = 34/105 (32.38%), Postives = 52/105 (49.52%), Query Frame = 0


Query: 146 RKRAQCELEDGNFSQAELLLSQAIGLKPCGGIHIIFKDRSIVRLTLGNHSGALEDANEAL 205
           + +       G+++ A    ++AI L P    HI++ +RS    +L  +  AL DA + +
Sbjct: 6   KSKGNAAFSSGDYATAITHFTEAINLSPTN--HILYSNRSASYASLHRYEEALSDAKKTI 65

Query: 206 RVAPRYLEAYICQGDAFIAMDHFDSAETSYSTALEIDPSIRRSKS 251
            + P + + Y   G AFI +  FD A  SY   LEIDPS    KS
Sbjct: 66  ELKPDWSKGYSRLGAAFIGLSKFDEAVDSYKKGLEIDPSNEMLKS 108

[Close]

BLAST of HG10020533 vs. TAIR 10
Match: AT1G12270.1 (stress-inducible protein, putative )

HSP 1 Score: 58.2 bits (139), Expect = 1.2e-08
Identity = 32/121 (26.45%), Postives = 65/121 (53.72%), Query Frame = 0


Query: 146 RKRAQCELEDGNFSQAELLLSQAIGLKPCGGIHIIFKDRSIVRLTLGNHSGALEDANEAL 205
           + +       G+F+ A    ++AI L P    H++F +RS    +L  ++ AL DA E +
Sbjct: 6   KAKGNAAFSSGDFTTAINHFTEAIALAPTN--HVLFSNRSAAHASLHQYAEALSDAKETI 65

Query: 206 RVAPRYLEAYICQGDAFIAMDHFDSAETSYSTALEIDPSIRRSKSFKARVAKLQAKLSAV 265
           ++ P + + Y   G A + ++ F+ A T+Y   L++DP+   +++ K+ +A  +A ++  
Sbjct: 66  KLKPYWPKGYSRLGAAHLGLNQFELAVTAYKKGLDVDPT---NEALKSGLADAEASVARS 121

Query: 266 R 267
           R
Sbjct: 126 R 121

The following BLAST results are available for this feature:

BLAST of HG10020533 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038894326.1	4.6e-111	83.20	uncharacterized protein LOC120082956 [Benincasa hispida]	[more]
XP_004137391.1	1.3e-108	91.89	uncharacterized protein LOC101213093 [Cucumis sativus] >XP_031740366.1 uncharact...	[more]
XP_008437609.1	1.4e-104	88.74	PREDICTED: tetratricopeptide repeat protein 1 [Cucumis melo]	[more]
XP_022923908.1	1.7e-100	85.65	small glutamine-rich tetratricopeptide repeat-containing protein beta isoform X1...	[more]
XP_023519354.1	4.8e-100	85.65	small glutamine-rich tetratricopeptide repeat-containing protein beta [Cucurbita...	[more]

BLAST of HG10020533 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9STH1	2.6e-08	32.38	Hsp70-Hsp90 organizing protein 3 OS=Arabidopsis thaliana OX=3702 GN=HOP3 PE=2 SV...	[more]
Q9LNB6	1.7e-07	26.45	Hsp70-Hsp90 organizing protein 1 OS=Arabidopsis thaliana OX=3702 GN=HOP1 PE=2 SV...	[more]
Q96EQ0	2.9e-07	28.10	Small glutamine-rich tetratricopeptide repeat-containing protein beta OS=Homo sa...	[more]
Q8VD33	6.5e-07	28.10	Small glutamine-rich tetratricopeptide repeat-containing protein beta OS=Mus mus...	[more]
Q80W98	6.5e-07	28.10	Small glutamine-rich tetratricopeptide repeat-containing protein beta OS=Rattus ...	[more]

BLAST of HG10020533 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LQA2	6.1e-109	91.89	TPR_REGION domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G031840 ...	[more]
A0A1S3AUF9	7.0e-105	88.74	tetratricopeptide repeat protein 1 OS=Cucumis melo OX=3656 GN=LOC103482942 PE=4 ...	[more]
A0A6J1EAV3	8.0e-101	85.65	small glutamine-rich tetratricopeptide repeat-containing protein beta isoform X1...	[more]
A0A6J1KQA5	4.9e-98	83.86	uncharacterized protein LOC111495518 OS=Cucurbita maxima OX=3661 GN=LOC111495518...	[more]
A0A6J1C6P2	1.0e-95	81.98	sperm-associated antigen 1 OS=Momordica charantia OX=3673 GN=LOC111008751 PE=4 S...	[more]

BLAST of HG10020533 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G17670.1	1.8e-65	57.55	tetratricopeptide repeat (TPR)-containing protein	[more]
AT3G17670.2	1.8e-65	57.55	tetratricopeptide repeat (TPR)-containing protein	[more]
AT4G12400.1	1.9e-09	32.38	stress-inducible protein, putative	[more]
AT4G12400.2	1.9e-09	32.38	stress-inducible protein, putative	[more]
AT1G12270.1	1.2e-08	26.45	stress-inducible protein, putative	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR019734	Tetratricopeptide repeat	SMART	SM00028	tpr_5	coord: 212..245 e-value: 0.024 score: 23.8 coord: 178..211 e-value: 41.0 score: 9.5 coord: 142..175 e-value: 110.0 score: 5.8
IPR019734	Tetratricopeptide repeat	PROSITE	PS50005	TPR	coord: 212..245 score: 9.7944
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 135..268 e-value: 4.4E-18 score: 67.4
IPR011990	Tetratricopeptide-like helical domain superfamily	SUPERFAMILY	48452	TPR-like	coord: 142..259
None	No IPR available	GENE3D	3.40.30.10	Glutaredoxin	coord: 53..134 e-value: 1.6E-8 score: 36.6
None	No IPR available	PANTHER	PTHR47682	TETRATRICOPEPTIDE REPEAT (TPR)-CONTAINING PROTEIN	coord: 45..267
None	No IPR available	CDD	cd02980	TRX_Fd_family	coord: 56..123 e-value: 6.02879E-14 score: 63.4152
IPR036249	Thioredoxin-like superfamily	SUPERFAMILY	52833	Thioredoxin-like	coord: 54..125

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10020533.1	HG10020533.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding