HG10020351 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10020351
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	protein RETICULATA, chloroplastic-like
Location	Chr04: 31080743 .. 31085567 (+)
RNA-Seq Expression	HG10020351
Synteny	HG10020351

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAATTTGAGGAAGTGATGAAAGAGGTGGAATCACGAGGGGTGGCTCTTCCTTCTGATATGTTAGAGGCAGCGAAGAGCGAGGGAATTCGCAAGTTGCTGCTGCTTAGATATTTGGAGATGCAGGTAAAACATTTTTTTTTTCCATTCTGTATGATATGTTTAATTCTGGGGTTTATAGTTCTATCAACTAAGAGGGTAAGAGATTATCTTCTATTACATATTTTACGATTTCTGCTTAACAATGTCCTTGTTGGTTATTCAAGGGATTAGGCTGGCCTCTCGGCTTTTTGATGAGATCCTGTGCTATGATTCGAAACCGGGTTCTAGCTGATCCATCATTTTTCTTCAAAGTGGGCGTGGAGGTCTATTAGCTCATCCTCTTACCATATTTCCGTATTTTTTGCAAATTTCAATCTGATCAAATTCATAAAGATATGACTATGATGTCACTGGAAATAATATAGATTGAGAAAGTTGATATGTTGACTGAATGTTCTGATTTAGTCTGATAGATAAAACTGAGGCCAAATCTTTAGGGTCCTACTTGGCAAATCCTGATTTCTGGAAGTAGAATGAGAACGGGAAATTAATTGGAAAAGCATATAAATGTTAATGAGGATAGACTGGGTTGCATCATTGATTGGGGCTTTACATGATCATGTTTTACAAGCATGGTCAGTCTTTTTTTTTTTTTTTTGGTATAATATTTGTTTTGACATAACTTTGGATATCACACGGATTTTTTTAAATTACTGATTTAATATGGGCAGTTAGTTATTGATTCTTGCTGTGCTACTTTTGCGGAAGTTCAAAAGAGAGGCAAAGATTTCTGGACAGAATTTGAGCTTTATCTTGCTGATATTTTGGTTGGCGTGGCAGTTAACTTTGCTTTGGTTGCCCTGTTGGCACCTTATGCTCGTTTTGGGCAACCGTCTGTGTCGAAAGGTTTCCTTGGGCGCATTCATCATGCTTGTGAAGCACTACCTAGCAGGTTCCTAAGTTGTCTTACAATATAAAACGGTTAAATTGCAAAGTTGGTCCCTATTATTTGGAAAAAGTTTGAATTTAGTCTCTATGGTTTGATAAGAACCTCAACGTAGAGATTGTTTATGAGGTTTAATTAAATTCTAACTTTCTCCAGAGTATATGGATCAAATTTGTAATTCAACCATATAAAAATTGTGTCAACGTTGTGGATCTCCGATGCTGAGTTGTGTTACTTGTATGTTGTTGTTATCCTTTTGAAATCAATATGGTTAGAAGTTATCTTCATGTGTGTAGTGTTTTTGAAGCTGAACGACCAGGATGTAGATTTTCTGTACAACAAAGAGTTGCCACATTTTTCTATAAGGTGAGGGTTACAGATACTATTAGCCAAATCTATTTTTATCTCTTAGCAACTTATTTTGATACTTTTCTTTTTAGGGACTCGTGTATGGCGTAGTAGGATTTGGATGTGGTATAATCGGCCAAGGCATTGCAAATTTAATAATGACTGCGAAAAGGTTATATATATTCTTTGTTAATATTATTATTATTATTTGTTTCATGATGATAATTTAAGGCATTTCATCAACTACTGCTCCTTTTCATATCACACACACATGTATAGGTGTATGCATTTATATACTCCATACTATTGAAGTTTTCCAGGCAAGGTTTGACATAATAATTGGATGTAAAACACTGACACTAGAGATATTATTTGTATAAATTTACGAGCCCTATTTAGGACCGTAGCCATACATTTATTTCTTCTTCATTGGCATCATTGAGCTTGTTCCTCGAATTTCTTTGCATTTATGCAGACTCTGGCACATTTCTTTCACATCATTGAGTGCTTTGTTTTTTATGTGACCCTTACCCCTGTCCTTTTCCCTTTTCCTTTTCTATACATCAGGAGCATAAAGAAATCTGAAGATGAAGTACCAGTGCCACCTCTCTTTAAGAGCGCCGCTCTTTGGGGTATTCCTCACTTGTTTATATTCTTTAAATTCTATTTGATCGCTTTTCCCTGGGTCATGTGAATGTTGCTACTTCGCTTATTGCTTTACCCTCACTAGATAATGGCTTTGTATGTCTACAATGAAGTATATGTTGCATGTTTATCATTTGTTTCTCTTGCATTCCAGACATATGTGAAGCTTGTGCTTGCTGCTTCTTTCAGACACGAGAACTTATATTCTGATTTGATCAAATGCACTATATGCTTAGGTTAATATGTTTACCACGCTCAATCTACTTGATCAGTATTTACTTTGTAATTTGTTCATCAATTTTTGAATTCGGAAAGGATTCTATTTAATCAGCCGAGATATGGGTTTTGATATATTGTTGGATTCATGAGCTTGTGAAAGCTCAAGTGTGGTTGCCCTATTTCACCTGACTTACATACTACACAGAGAAGTTTACTCTCTACCCTGTGACATTGTGATACCTAGAACTAAAAAGTGATCCGTCGAAAGATCTCTTGCAGTGCTATTTGGTTTTCTCTTTCCTGCTACTTATCCTGTCCAAGGTTCTTACGGTGTCCACAATGTTCAGACCAATTTCCTTAAAGTCTTGAGATTGTTTTTCATTTGGAGTTCTCATTCTTGGTATTTTTCCATTTGTAAATTCGTTTTTTGCTTCTCACTCAAATTTGTTTTCTTGCACCCGAACTTTTCGTTCTTGGTACTTTCTATTTGTAAGGTAGTTTTTTGTTATTTCTTACTAAAATATGTTCTCTTACACCCAAACTTGCAGGTGTTTTCCTCGCAGTATCTTCGAACACGCGCTACCAGATCATCAATGGACTAGAGCGTGTAGTCGAATCATCGCCATTAGCAAAGAATATTCCAGCAGTTGCTTTGGCTTTCACAGTTGGTATTCGATTTGGCAATAACGTGTATGCTGGAATGCAATTTATCGACTGGGCTAGATGGAGTGGAGTGCAGTAAGACCATCTAAAGACAGTGAGATATCACTTATGTTTCCTAGGAGTCGAGAAGTGTTCATAGGAAAACAAAAGGTGCCACATTCTAATCGCCTATTATCTCAATTCATTAAGGCCATCCCCCCCAACCCCACAGGTGTAACTTAAGCGTCGACATTTACTGTAATATCTCCGCAGAACTGCTGTAAAATTAATATCTTGCAGCAATAAAATGGTTAACAAAATTCATGAATCGACTTATTTGGTTCATTGCTTTATTTGTTAGCATGCTGACATCAAATATAACATCTGCTTGAAAAACTTATGCTGCAATAATGGCTCGAGAGATTTCCACCCACACGTTTTAAGATATTCTAATTTCCATATATTTTCTCAAGTATATACTTTCAAAATTCTTATTTTAGACGTTTGACATTTCCCTGTGTCTTGAATTGTAGCTGTGAGTTGTGAGGTGCAACTCTCAACACAAACGCAACCCAAGCAAAAAAAACATCCCTTTCTGTGATTTCTGAGGCCACCAATCAAAACGTCCAAGAATTAAATCCAACTTCGAAATAATCTTAGATTAGTATGTTGTATTGCCTCACAGAAAAAGTATATGTTTCTCAGAAGATATTTTTGTGTCACAACTGTATTGATTTAACTCCTGCTAATGCAAACAAAGTTTGCTAATTTTGTTGTTTTAAAGGTGAAAGAAAGGGGGTTTTCTGAGTAGAGCAGAGAGCTACCACGGAAATATCATCATTTGCTTTGAAGCACAGCCACCAGATTACCCAAGTATCATTCTTTTATCAAAAATACACTTCATTTCCCTGACATTAGGCTATAAATTTGCAGAGGTTCGTGCTCCCAGGTTTTGCAGGCTGGTTTTGTACAGAGAAAAGCCAACCTGTCATTGCTTTTGAAGATGTTGGAGGGCAAAGCTGTGGTCCGCGAAACAGACATGCCACAGGGGATCCAGAGCCATGTCCTTGAGTTGGCTTATAAAGCACTTGATCAACACGAAGTTTCCGACTGTCAATCTATTGCACATTTCATCAAACAGGTTTATTTTTTTTAACATTCAGAATCTTCTTTAGTAGTGGTTTAAATTTCTATTTTATTAAATTAACGATATGCTCTTCCCCCCCCCCCCCCCCCCCCCTTTTTTTTTTTTTTCATAAAAGAAAGACAGGTCCTTTCGTTGCAATAATAGATTGAAAAGATTCATTTTTGTAACCTGTAAAAGTTGTAGACACTCTTTTATGATATAAAGAAGATATGCCTCATCATTCACAGTAACCACATCAATAAACAAAGTTACCTTTTCCTTTTAAAATATTCGAGTGTGCGTCATTTTCAGATACTATAAATTTCTACAGACACAAACATAGACTATCTATGTACACGTCATCCGCCATCTGATCTGATGAGACTAAATCTGGAATATACTTTGTGTGGATGATGTTTGAATCAAATTGTCTGAAGAGTAAAGGGACATCATTTTGAATGAAATGACTCAGGAAGTTCCCATGTTCATCATTTCTTCCTTTTTGCTGCTTTGTGAACAATCTCATTATGATAATGAGAAAAAGGTGTTCGATATCAAATTACATACTATCCACTGGACCAACGCGTGACCCGTTAGTGAAAGATTACAAAATAGTATCTGTATTAAATTGAATACTTATGTGACTTTGAGCTTTATTTGATAATTAGAGGTTTGACGAAGCTTATGGCCCGGCATGGCATTGTGTGGTGGGCAAAGCGTTTGGAGGTTGCATTACACATCTGTGCGGGAGTTTCATCTTCTTCCATGTGGATAGGATGGAGTTTCTCATCTTTAAGGATGGAAGAGACTGCTGCAAAAGCGTTGAAGAGACCGTTGGAGTTGGCCAGAAATGTTAA

mRNA sequence

ATGAAATTTGAGGAAGTGATGAAAGAGGTGGAATCACGAGGGGTGGCTCTTCCTTCTGATATGTTAGAGGCAGCGAAGAGCGAGGGAATTCGCAAGTTGCTGCTGCTTAGATATTTGGAGATGCAGGGATTAGGCTGGCCTCTCGGCTTTTTGATGAGATCCTGTGCTATGATTCGAAACCGGGTTCTAGCTGATCCATCATTTTTCTTCAAAGTGGGCGTGGAGTTAGTTATTGATTCTTGCTGTGCTACTTTTGCGGAAGTTCAAAAGAGAGGCAAAGATTTCTGGACAGAATTTGAGCTTTATCTTGCTGATATTTTGGTTGGCGTGGCAGTTAACTTTGCTTTGGTTGCCCTGTTGGCACCTTATGCTCGTTTTGGGCAACCGTCTGTGTCGAAAGGTTTCCTTGGGCGCATTCATCATGCTTGTGAAGCACTACCTAGCAGTGTTTTTGAAGCTGAACGACCAGGATGTAGATTTTCTGTACAACAAAGAGTTGCCACATTTTTCTATAAGGGACTCGTGTATGGCGTAGTAGGATTTGGATGTGGTATAATCGGCCAAGGCATTGCAAATTTAATAATGACTGCGAAAAGGAGCATAAAGAAATCTGAAGATGAAGTACCAGTGCCACCTCTCTTTAAGAGCGCCGCTCTTTGGGGTGTTTTCCTCGCAGTATCTTCGAACACGCGCTACCAGATCATCAATGGACTAGAGCGTGTAGTCGAATCATCGCCATTAGCAAAGAATATTCCAGCAGTTGCTTTGGCTTTCACAGTTGGTATTCGATTTGGCAATAACGTGTATGCTGGAATGCAATTTATCGACTGGGCTAGATGGAGTGGAGTGCAAGGTTCGTGCTCCCAGGTTTTGCAGGCTGGTTTTGTACAGAGAAAAGCCAACCTGTCATTGCTTTTGAAGATGTTGGAGGGCAAAGCTGTGGTCCGCGAAACAGACATGCCACAGGGGATCCAGAGCCATGTCCTTGAGTTGGCTTATAAAGCACTTGATCAACACGAAGTTTCCGACTGTCAATCTATTGCACATTTCATCAAACAGAGGTTTGACGAAGCTTATGGCCCGGCATGGCATTGTGTGGTGGGCAAAGCGTTTGGAGGTTGCATTACACATCTGTGCGGGAGTTTCATCTTCTTCCATGTGGATAGGATGGAGTTTCTCATCTTTAAGGATGGAAGAGACTGCTGCAAAAGCGTTGAAGAGACCGTTGGAGTTGGCCAGAAATGTTAA

Coding sequence (CDS)

ATGAAATTTGAGGAAGTGATGAAAGAGGTGGAATCACGAGGGGTGGCTCTTCCTTCTGATATGTTAGAGGCAGCGAAGAGCGAGGGAATTCGCAAGTTGCTGCTGCTTAGATATTTGGAGATGCAGGGATTAGGCTGGCCTCTCGGCTTTTTGATGAGATCCTGTGCTATGATTCGAAACCGGGTTCTAGCTGATCCATCATTTTTCTTCAAAGTGGGCGTGGAGTTAGTTATTGATTCTTGCTGTGCTACTTTTGCGGAAGTTCAAAAGAGAGGCAAAGATTTCTGGACAGAATTTGAGCTTTATCTTGCTGATATTTTGGTTGGCGTGGCAGTTAACTTTGCTTTGGTTGCCCTGTTGGCACCTTATGCTCGTTTTGGGCAACCGTCTGTGTCGAAAGGTTTCCTTGGGCGCATTCATCATGCTTGTGAAGCACTACCTAGCAGTGTTTTTGAAGCTGAACGACCAGGATGTAGATTTTCTGTACAACAAAGAGTTGCCACATTTTTCTATAAGGGACTCGTGTATGGCGTAGTAGGATTTGGATGTGGTATAATCGGCCAAGGCATTGCAAATTTAATAATGACTGCGAAAAGGAGCATAAAGAAATCTGAAGATGAAGTACCAGTGCCACCTCTCTTTAAGAGCGCCGCTCTTTGGGGTGTTTTCCTCGCAGTATCTTCGAACACGCGCTACCAGATCATCAATGGACTAGAGCGTGTAGTCGAATCATCGCCATTAGCAAAGAATATTCCAGCAGTTGCTTTGGCTTTCACAGTTGGTATTCGATTTGGCAATAACGTGTATGCTGGAATGCAATTTATCGACTGGGCTAGATGGAGTGGAGTGCAAGGTTCGTGCTCCCAGGTTTTGCAGGCTGGTTTTGTACAGAGAAAAGCCAACCTGTCATTGCTTTTGAAGATGTTGGAGGGCAAAGCTGTGGTCCGCGAAACAGACATGCCACAGGGGATCCAGAGCCATGTCCTTGAGTTGGCTTATAAAGCACTTGATCAACACGAAGTTTCCGACTGTCAATCTATTGCACATTTCATCAAACAGAGGTTTGACGAAGCTTATGGCCCGGCATGGCATTGTGTGGTGGGCAAAGCGTTTGGAGGTTGCATTACACATCTGTGCGGGAGTTTCATCTTCTTCCATGTGGATAGGATGGAGTTTCTCATCTTTAAGGATGGAAGAGACTGCTGCAAAAGCGTTGAAGAGACCGTTGGAGTTGGCCAGAAATGTTAA

Protein sequence

MKFEEVMKEVESRGVALPSDMLEAAKSEGIRKLLLLRYLEMQGLGWPLGFLMRSCAMIRNRVLADPSFFFKVGVELVIDSCCATFAEVQKRGKDFWTEFELYLADILVGVAVNFALVALLAPYARFGQPSVSKGFLGRIHHACEALPSSVFEAERPGCRFSVQQRVATFFYKGLVYGVVGFGCGIIGQGIANLIMTAKRSIKKSEDEVPVPPLFKSAALWGVFLAVSSNTRYQIINGLERVVESSPLAKNIPAVALAFTVGIRFGNNVYAGMQFIDWARWSGVQGSCSQVLQAGFVQRKANLSLLLKMLEGKAVVRETDMPQGIQSHVLELAYKALDQHEVSDCQSIAHFIKQRFDEAYGPAWHCVVGKAFGGCITHLCGSFIFFHVDRMEFLIFKDGRDCCKSVEETVGVGQKC

Homology

[Close]

BLAST of HG10020351 vs. NCBI nr
Match: XP_038903927.1 (protein RETICULATA, chloroplastic-like [Benincasa hispida])

HSP 1 Score: 561.2 bits (1445), Expect = 7.3e-156
Identity = 278/284 (97.89%), Postives = 282/284 (99.30%), Query Frame = 0


Query: 1   MKFEEVMKEVESRGVALPSDMLEAAKSEGIRKLLLLRYLEMQGLGWPLGFLMRSCAMIRN 60
           MKFEEVMKEVESRGV LPSDMLEAAKSEGIRKLLLLRYLEMQGLGWPLGFLMRSC MIRN
Sbjct: 157 MKFEEVMKEVESRGVTLPSDMLEAAKSEGIRKLLLLRYLEMQGLGWPLGFLMRSCGMIRN 216

Query: 61  RVLADPSFFFKVGVELVIDSCCATFAEVQKRGKDFWTEFELYLADILVGVAVNFALVALL 120
           RVLADPSFFFKVGVELVIDSCCATFAEVQKRGKDFWTEFELYLADILVGVAVNFALVALL
Sbjct: 217 RVLADPSFFFKVGVELVIDSCCATFAEVQKRGKDFWTEFELYLADILVGVAVNFALVALL 276

Query: 121 APYARFGQPSVSKGFLGRIHHACEALPSSVFEAERPGCRFSVQQRVATFFYKGLVYGVVG 180
           APYARFGQPSVSKGFLGRIHHACEALPSSVFEAERPGCRFSVQQR+ATFFYKGL+YGVVG
Sbjct: 277 APYARFGQPSVSKGFLGRIHHACEALPSSVFEAERPGCRFSVQQRIATFFYKGLMYGVVG 336

Query: 181 FGCGIIGQGIANLIMTAKRSIKKSEDEVPVPPLFKSAALWGVFLAVSSNTRYQIINGLER 240
           FGCGI+GQGIANLIMTAKRSIKKSEDEVPVPPLFKSAALWGVFLAVSSNTRYQIINGLER
Sbjct: 337 FGCGILGQGIANLIMTAKRSIKKSEDEVPVPPLFKSAALWGVFLAVSSNTRYQIINGLER 396

Query: 241 VVESSPLAKNIPAVALAFTVGIRFGNNVYAGMQFIDWARWSGVQ 285
           +VESSPLAKNIPAVALAFTVGIRFGNNVYAGMQFIDWARWSGVQ
Sbjct: 397 LVESSPLAKNIPAVALAFTVGIRFGNNVYAGMQFIDWARWSGVQ 440

[Close]

BLAST of HG10020351 vs. NCBI nr
Match: XP_008442503.1 (PREDICTED: protein RETICULATA, chloroplastic-like [Cucumis melo] >KAA0044123.1 protein RETICULATA [Cucumis melo var. makuwa] >TYK25015.1 protein RETICULATA [Cucumis melo var. makuwa])

HSP 1 Score: 558.5 bits (1438), Expect = 4.8e-155
Identity = 277/284 (97.54%), Postives = 282/284 (99.30%), Query Frame = 0


Query: 1   MKFEEVMKEVESRGVALPSDMLEAAKSEGIRKLLLLRYLEMQGLGWPLGFLMRSCAMIRN 60
           MKFEEVMKE+ESRGV LPSDMLEAAKSEGIRKLLLLRYLEMQGLGWPLGFLMRSCA+IRN
Sbjct: 158 MKFEEVMKELESRGVTLPSDMLEAAKSEGIRKLLLLRYLEMQGLGWPLGFLMRSCALIRN 217

Query: 61  RVLADPSFFFKVGVELVIDSCCATFAEVQKRGKDFWTEFELYLADILVGVAVNFALVALL 120
           RVLADPSFFFKVGVELVIDSCCATFAEVQKRGKDFWTEFELYLADILVGVAVNFALVALL
Sbjct: 218 RVLADPSFFFKVGVELVIDSCCATFAEVQKRGKDFWTEFELYLADILVGVAVNFALVALL 277

Query: 121 APYARFGQPSVSKGFLGRIHHACEALPSSVFEAERPGCRFSVQQRVATFFYKGLVYGVVG 180
           APYARFGQPSVSKGFLGRI HACEALPSSVFEAERPGCRFSVQQR+ATFFYKGLVYGVVG
Sbjct: 278 APYARFGQPSVSKGFLGRIQHACEALPSSVFEAERPGCRFSVQQRIATFFYKGLVYGVVG 337

Query: 181 FGCGIIGQGIANLIMTAKRSIKKSEDEVPVPPLFKSAALWGVFLAVSSNTRYQIINGLER 240
           FGCGIIGQGIANLIMTAKRSIKKSEDEVPVPPLFKSAALWGVFLA+SSNTRYQIINGLER
Sbjct: 338 FGCGIIGQGIANLIMTAKRSIKKSEDEVPVPPLFKSAALWGVFLALSSNTRYQIINGLER 397

Query: 241 VVESSPLAKNIPAVALAFTVGIRFGNNVYAGMQFIDWARWSGVQ 285
           VVESSPLAKNIPAVA+AFTVGIRFGNNVYAGMQFIDWARWSGVQ
Sbjct: 398 VVESSPLAKNIPAVAMAFTVGIRFGNNVYAGMQFIDWARWSGVQ 441

[Close]

BLAST of HG10020351 vs. NCBI nr
Match: XP_004137924.1 (protein RETICULATA, chloroplastic [Cucumis sativus] >XP_031738607.1 protein RETICULATA, chloroplastic [Cucumis sativus] >KGN58831.1 hypothetical protein Csa_002581 [Cucumis sativus])

HSP 1 Score: 557.8 bits (1436), Expect = 8.1e-155
Identity = 277/284 (97.54%), Postives = 282/284 (99.30%), Query Frame = 0


Query: 1   MKFEEVMKEVESRGVALPSDMLEAAKSEGIRKLLLLRYLEMQGLGWPLGFLMRSCAMIRN 60
           MKFEEVMKE+ESRGV LPSDMLEAAKSEGIRKLLLLRYLEMQGLGWPLGFLMRSCAMIRN
Sbjct: 156 MKFEEVMKELESRGVTLPSDMLEAAKSEGIRKLLLLRYLEMQGLGWPLGFLMRSCAMIRN 215

Query: 61  RVLADPSFFFKVGVELVIDSCCATFAEVQKRGKDFWTEFELYLADILVGVAVNFALVALL 120
           RVLADPSFFFKVGVELVIDSCCATFAEVQKRGKDFWTEFELYLADILVGVAVNFALVALL
Sbjct: 216 RVLADPSFFFKVGVELVIDSCCATFAEVQKRGKDFWTEFELYLADILVGVAVNFALVALL 275

Query: 121 APYARFGQPSVSKGFLGRIHHACEALPSSVFEAERPGCRFSVQQRVATFFYKGLVYGVVG 180
           APYARFGQPSVSKGFLGRI HACEALPSSVFEAERPGCRFSVQQR+ATFFYKGLVYGVVG
Sbjct: 276 APYARFGQPSVSKGFLGRIQHACEALPSSVFEAERPGCRFSVQQRIATFFYKGLVYGVVG 335

Query: 181 FGCGIIGQGIANLIMTAKRSIKKSEDEVPVPPLFKSAALWGVFLAVSSNTRYQIINGLER 240
           FGCGIIGQGIANLIMTAKRSIKKSE+EVPVPPLFKSAALWGVFLA+SSNTRYQIINGLER
Sbjct: 336 FGCGIIGQGIANLIMTAKRSIKKSENEVPVPPLFKSAALWGVFLALSSNTRYQIINGLER 395

Query: 241 VVESSPLAKNIPAVALAFTVGIRFGNNVYAGMQFIDWARWSGVQ 285
           VVESSPLAKNIPAVA+AFTVGIRFGNNVYAGMQFIDWARWSGVQ
Sbjct: 396 VVESSPLAKNIPAVAMAFTVGIRFGNNVYAGMQFIDWARWSGVQ 439

[Close]

BLAST of HG10020351 vs. NCBI nr
Match: KAG5554021.1 (hypothetical protein RHGRI_011779 [Rhododendron griersonianum])

HSP 1 Score: 557.0 bits (1434), Expect = 1.4e-154
Identity = 284/450 (63.11%), Postives = 334/450 (74.22%), Query Frame = 0


Query: 1   MKFEEVMKEVESRGVALPSDMLEAAKSEGIRKLLLLRYLEMQGLGWPLGFLMRSCAMIRN 60
           MKFE+VMKE E+RG +LP DMLEAAKS G+R++                           
Sbjct: 142 MKFEDVMKETEARGASLPLDMLEAAKSGGLREM--------------------------- 201

Query: 61  RVLADPSFFFKVGVELVIDSCCATFAEVQKRGKDFWTEFELYLADILVGVAVNFALVALL 120
             LADPSF FKVG+E+VIDSCCAT AEVQKRGKDFW EFELYLAD+LVGV VN ALV +L
Sbjct: 202 --LADPSFLFKVGIEIVIDSCCATLAEVQKRGKDFWAEFELYLADLLVGVVVNVALVGML 261

Query: 121 APYARFGQPSVSKGFLGRIHHACEALPSSVFEAERPGCRFSVQQRVATFFYK-------- 180
           APYAR GQPS+SKG  GR+ HA  ALPSSVFEAERPGCRFSV+QR+AT+F+K        
Sbjct: 262 APYARIGQPSLSKGVFGRMRHAYAALPSSVFEAERPGCRFSVKQRIATYFFKHIVDCWRY 321

Query: 181 --GLVYGVVGFGCGIIGQGIANLIMTAKRSIKKSEDEVPVPPLFKSAALWGVFLAVSSNT 240
             G++YG VGF CGIIGQGIANLIMTAKRSI+KSE+++PVPPL KSAALWGVFLAVSSNT
Sbjct: 322 FQGVMYGAVGFACGIIGQGIANLIMTAKRSIRKSEEDIPVPPLVKSAALWGVFLAVSSNT 381

Query: 241 RYQIINGLERVVESSPLAKNIPAVALAFTVGIRFGNNVYAGMQFIDWARWSGVQGSCSQV 300
           RYQIINGLER+VESSPLAK +P VA+AFT+G+RFGNN+Y GMQF+DWAR +        V
Sbjct: 382 RYQIINGLERLVESSPLAKKVPPVAMAFTIGVRFGNNIYGGMQFVDWARLTSAVYEQHPV 441

Query: 301 LQAGF--VQRKA-----NLSLLLKMLEGKAVVRETDMPQGIQSHVLELAYKALDQHEVSD 360
              G+  ++R++        L++KMLEGKAVVRETDMP+ +QSH +ELAY+ALD HEVSD
Sbjct: 442 YWTGYRVIKRRSVWTEFGYCLIIKMLEGKAVVRETDMPEALQSHGMELAYQALDLHEVSD 501

Query: 361 CQSIAHFIK-------------------QRFDEAYGPAWHCVVGKAFGGCITHLCGSFIF 415
           CQSIAHFIK                   Q+FDE YGPAWHCVVG+ FG CITHLCGSF+F
Sbjct: 502 CQSIAHFIKQIDVSMKEFLSKQKFNMFPQKFDEDYGPAWHCVVGRDFGSCITHLCGSFMF 561

[Close]

BLAST of HG10020351 vs. NCBI nr
Match: XP_022145581.1 (protein RETICULATA, chloroplastic-like isoform X1 [Momordica charantia])

HSP 1 Score: 544.7 bits (1402), Expect = 7.1e-151
Identity = 268/284 (94.37%), Postives = 278/284 (97.89%), Query Frame = 0


Query: 1   MKFEEVMKEVESRGVALPSDMLEAAKSEGIRKLLLLRYLEMQGLGWPLGFLMRSCAMIRN 60
           MKFEEVMKE+ESRGV LPSDMLEAAKS GIRKLLLLRYLEMQGLGWPLGFLM+SC+MIRN
Sbjct: 152 MKFEEVMKEMESRGVTLPSDMLEAAKSVGIRKLLLLRYLEMQGLGWPLGFLMKSCSMIRN 211

Query: 61  RVLADPSFFFKVGVELVIDSCCATFAEVQKRGKDFWTEFELYLADILVGVAVNFALVALL 120
           RVLADPSFFFKVGVELVIDSCCATFAEVQKRGKDFWTEFELYLADILVGVAVNFALVALL
Sbjct: 212 RVLADPSFFFKVGVELVIDSCCATFAEVQKRGKDFWTEFELYLADILVGVAVNFALVALL 271

Query: 121 APYARFGQPSVSKGFLGRIHHACEALPSSVFEAERPGCRFSVQQRVATFFYKGLVYGVVG 180
           APYARFGQPSVSKGFLGRI HAC ALPSSVFEAERPGCRFS+QQR+ATFFYKG VYG VG
Sbjct: 272 APYARFGQPSVSKGFLGRIQHACGALPSSVFEAERPGCRFSIQQRIATFFYKGFVYGAVG 331

Query: 181 FGCGIIGQGIANLIMTAKRSIKKSEDEVPVPPLFKSAALWGVFLAVSSNTRYQIINGLER 240
           FGCGIIGQGIANLIMTAKRSIKKSE++VPVPPLFKSAALWGVFLA+SSNTRYQIINGLER
Sbjct: 332 FGCGIIGQGIANLIMTAKRSIKKSENDVPVPPLFKSAALWGVFLAISSNTRYQIINGLER 391

Query: 241 VVESSPLAKNIPAVALAFTVGIRFGNNVYAGMQFIDWARWSGVQ 285
           VVESSPLAK+IPAVALAFTVGIRFGNNVYAGMQF+DWARWSGVQ
Sbjct: 392 VVESSPLAKHIPAVALAFTVGIRFGNNVYAGMQFVDWARWSGVQ 435

[Close]

BLAST of HG10020351 vs. ExPASy Swiss-Prot
Match: Q9FGP9 (Protein RETICULATA-RELATED 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RER1 PE=1 SV=1)

HSP 1 Score: 453.8 bits (1166), Expect = 2.2e-126
Identity = 219/285 (76.84%), Postives = 248/285 (87.02%), Query Frame = 0


Query: 1   MKFEEVMKEVESRGVALPSDMLEAAKSEGIRKLLLLRYLEMQGLGWPLGFLMRSCAMIRN 60
           +KFEEVMKE E RG+ LP DMLEAAKS GIRKL LLRYL++QG  WPLGFLMRSCAM+RN
Sbjct: 149 LKFEEVMKETERRGITLPEDMLEAAKSVGIRKLFLLRYLDLQGSVWPLGFLMRSCAMLRN 208

Query: 61  RVLADPSFFFKVGVELVIDSCCATFAEVQKRGKDFWTEFELYLADILVGVAVNFALVALL 120
           R+LADPSF FKVG E+ IDSCCATFAEVQKRG+DFW+EFELY AD+LVG+ V+ ALV LL
Sbjct: 209 RMLADPSFLFKVGTEVAIDSCCATFAEVQKRGEDFWSEFELYAADLLVGLVVDVALVGLL 268

Query: 121 APYARFGQPSV-SKGFLGRIHHACEALPSSVFEAERPGCRFSVQQRVATFFYKGLVYGVV 180
           APYAR G+PSV S G    +  AC +LPSSVFEAERPGC+FSV QR+ATFFYKGL+YG V
Sbjct: 269 APYARIGKPSVASTGLFKDLKRACASLPSSVFEAERPGCKFSVNQRIATFFYKGLLYGSV 328

Query: 181 GFGCGIIGQGIANLIMTAKRSIKKSEDEVPVPPLFKSAALWGVFLAVSSNTRYQIINGLE 240
           GFGCG+IGQGIANLIMTAKRS+KKSE++VP+PPLF+SAALWGVFL +SSN RYQIINGLE
Sbjct: 329 GFGCGLIGQGIANLIMTAKRSVKKSEEDVPIPPLFESAALWGVFLGLSSNARYQIINGLE 388

Query: 241 RVVESSPLAKNIPAVALAFTVGIRFGNNVYAGMQFIDWARWSGVQ 285
           RVVE S  AK IP VA+AFTVG+RF NNVY GMQF+DWA+ SGVQ
Sbjct: 389 RVVEGSTAAKRIPVVAMAFTVGVRFANNVYGGMQFVDWAKLSGVQ 433

[Close]

BLAST of HG10020351 vs. ExPASy Swiss-Prot
Match: B9DFK5 (Protein RETICULATA, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RE PE=1 SV=1)

HSP 1 Score: 445.3 bits (1144), Expect = 7.7e-124
Identity = 214/284 (75.35%), Postives = 243/284 (85.56%), Query Frame = 0


Query: 1   MKFEEVMKEVESRGVALPSDMLEAAKSEGIRKLLLLRYLEMQGLGWPLGFLMRSCAMIRN 60
           +KFEEVMKE E+RG  LPSDMLEAAK+ GIRK+LLLRYL++Q     LGF +RS AM+RN
Sbjct: 149 LKFEEVMKETEARGATLPSDMLEAAKNYGIRKVLLLRYLDLQSSAGLLGFAIRSWAMLRN 208

Query: 61  RVLADPSFFFKVGVELVIDSCCATFAEVQKRGKDFWTEFELYLADILVGVAVNFALVALL 120
           R+LADPSF FK+G E+VIDSCCAT AEVQKRGKDFW EFELY+AD+LVG  VN ALV +L
Sbjct: 209 RMLADPSFLFKIGAEIVIDSCCATVAEVQKRGKDFWAEFELYVADLLVGTVVNIALVGML 268

Query: 121 APYARFGQPSVSKGFLGRIHHACEALPSSVFEAERPGCRFSVQQRVATFFYKGLVYGVVG 180
           APY RFGQPS S GFLGR+  A  ALPSSVFEAERPGCRFS QQR+AT+FYKG++YG VG
Sbjct: 269 APYVRFGQPSASPGFLGRMVFAYNALPSSVFEAERPGCRFSAQQRLATYFYKGIMYGAVG 328

Query: 181 FGCGIIGQGIANLIMTAKRSIKKSEDEVPVPPLFKSAALWGVFLAVSSNTRYQIINGLER 240
           FGCGI+GQGIANLIMTAKR+I KSE+ +PVPPL KSAALWGVFL+VSSNTRYQIINGLER
Sbjct: 329 FGCGIVGQGIANLIMTAKRNINKSEENIPVPPLIKSAALWGVFLSVSSNTRYQIINGLER 388

Query: 241 VVESSPLAKNIPAVALAFTVGIRFGNNVYAGMQFIDWARWSGVQ 285
           VVE+SP AK  P  A+AFTVG+R  NN+Y GMQF+DWAR SG Q
Sbjct: 389 VVEASPFAKKFPPAAMAFTVGVRLANNIYGGMQFVDWARLSGCQ 432

[Close]

BLAST of HG10020351 vs. ExPASy Swiss-Prot
Match: Q94CJ5 (Protein RETICULATA-RELATED 4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RER4 PE=2 SV=1)

HSP 1 Score: 124.0 bits (310), Expect = 3.9e-27
Identity = 84/288 (29.17%), Postives = 146/288 (50.69%), Query Frame = 0


Query: 6   VMKEVESRGVALPSDMLEAAKSEGIRKLLLLRYLEMQG---LGWPLGFLMRSCAMIRNRV 65
           ++KE      +LP D+  A ++  I   ++ R+LE+Q    + W + F        R R+
Sbjct: 108 LLKESGIELESLPKDLAAAIEAGRIPGSVITRFLELQKSAVMRWLMQF-----GGFRERL 167

Query: 66  LADPSFFFKVGVELVIDSCCATFAEVQKRGKDFWTEFELYLADILVGVAVNFALVALLAP 125
           LAD  F  K+ +E  +     T AE ++R ++F+ E E+  AD+ + +  +F LV L AP
Sbjct: 168 LADDLFMAKLAMECGVGIFTKTAAEYERRRENFFNELEVVFADVAMAIIADFMLVYLPAP 227

Query: 126 YARFGQP-SVSKGFLGRIHHACEALPSSVFEAERPGCRFSVQQRVATFFYKGLVYGVVGF 185
                 P +++ G + +  H C   P + F+    G  +++ QR+      G     VG 
Sbjct: 228 TVSLRPPLALTAGGISKFFHNC---PDNAFQVALSGTSYTLLQRLGAITRNGAKLFAVGT 287

Query: 186 GCGIIGQGIANLIMTAKRSI-KKSEDEVPVPPLFKSAALWGVFLAVSSNTRYQIINGL-- 245
              ++G  I N  + A++++ + SE EV   P+  ++  +GV++AVSSN RYQI+ G+  
Sbjct: 288 TSSLVGTAITNAFIKARKAVDQNSEGEVETVPIVSTSVAYGVYMAVSSNLRYQIVAGVIE 347

Query: 246 ERVVESSPLAKNIPAVALAFTVGIRFGNNVYAGMQFIDWARWSGVQGS 287
           +R++E       +   AL F V  R GN     + ++D+AR  G+Q S
Sbjct: 348 QRLLEPMLHQHKLALSALCFAV--RTGNTFLGSLLWVDYARLIGIQKS 385

[Close]

BLAST of HG10020351 vs. ExPASy Swiss-Prot
Match: Q9C9Z3 (Protein RETICULATA-RELATED 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RER2 PE=2 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 3.4e-23
Identity = 77/240 (32.08%), Postives = 115/240 (47.92%), Query Frame = 0


Query: 47  PLGFLMRSCAMIRNRVLADPSFFFKVGVELVIDSCCATFAEVQKRGKDFWTEFELYLADI 106
           PLG  ++     R+RV AD  F FKV +E+++        ++  R      E +   + +
Sbjct: 97  PLGLFIQGW---RSRVAADSQFPFKVLMEMLVGVSANVLGDMASRPNFGLNELDFVFSTL 156

Query: 107 LVGVAVNFALVALLAPYARFGQPSVSKGFLGRIHHACEALPSS-VFEAERPGCRFSVQQR 166
           +VG  +NF L+ LLAP A      +S G    +     + PSS +FE       F++  R
Sbjct: 157 VVGSILNFTLMYLLAPSA------ISHGSSNLLPGIFRSCPSSHMFEQG----NFTLMNR 216

Query: 167 VATFFYKGLVYGVVGFGCGIIGQGIAN-LIMTAKRSIKKSEDEVPVPPLFKSAALWGVFL 226
             T  YKG+V+  VG   G++G  I+N LIM  K+     E     PP   ++  W   +
Sbjct: 217 FGTLVYKGMVFATVGLAAGLVGTAISNGLIMLRKKIDPSFETPNKPPPTLLNSLTWATHM 276

Query: 227 AVSSNTRYQIINGLERVVESSPLAKNIPAVALAFTVGIRFGNNVYAGMQFIDWARWSGVQ 285
            VS+N RYQ +NG E ++E S      P V     + +R  NNV  GM F+  AR +G Q
Sbjct: 277 GVSANVRYQTLNGAEFLLEKS----LPPLVFKTSVIALRVVNNVLGGMSFVTLARMTGSQ 319

[Close]

BLAST of HG10020351 vs. ExPASy Swiss-Prot
Match: Q8RWG3 (Protein RETICULATA-RELATED 6, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RER6 PE=2 SV=1)

HSP 1 Score: 97.4 bits (241), Expect = 3.9e-19
Identity = 66/232 (28.45%), Postives = 110/232 (47.41%), Query Frame = 0


Query: 59  RNRVLADPSFFFKVGVELVIDSCCATFAEVQKRGKDFWTEFELYLADILVGVAVNFALVA 118
           R R+LADP F  ++ +E  I       A+ +KR ++F+ E +  + D + G  V+F  V 
Sbjct: 478 RERLLADPKFLNRLAIEEAISITTTLIAQYEKRKENFFEEIDYVITDTVRGSVVDFFTVW 537

Query: 119 LLAP---YARFGQPSVSKGFLGRIHHACEALPSSVFEAERPGCRFSVQQRVATFFYKGLV 178
           L AP   +  +   +     +  +     ++P + F+    G  +++  R+A+    GL 
Sbjct: 538 LPAPTLSFLSYADETTGPDSIDALRGLLGSIPDNAFQKSLAGREWNLNLRIASVIVGGLK 597

Query: 179 YGVVGFGCGIIGQGIANLIMTAKRSIKKSEDEVPVP---PLFKSAALWGVFLAVSSNTRY 238
              VG        G +N +  A++ IK        P   PL K+A ++G FL  S+N RY
Sbjct: 598 LAGVGVVSSFAAVGASNALNIARKVIKPELVVAEKPKRSPLLKTAMVYGGFLGTSANLRY 657

Query: 239 QIINGLERVVESSPLAKNIPAVALAFTVGIRFGNNVYAGMQFIDWARWSGVQ 285
           QII GL     S  L+   P +  A +  +R  N+ +   Q+ID AR +G+Q
Sbjct: 658 QIIAGLIEHRLSDELSSQ-PLLVNAISFVVRTLNSYFGTQQWIDLARSTGLQ 708

[Close]

BLAST of HG10020351 vs. ExPASy TrEMBL
Match: A0A5A7TKU7 (Protein RETICULATA OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G001340 PE=3 SV=1)

HSP 1 Score: 558.5 bits (1438), Expect = 2.3e-155
Identity = 277/284 (97.54%), Postives = 282/284 (99.30%), Query Frame = 0


Query: 1   MKFEEVMKEVESRGVALPSDMLEAAKSEGIRKLLLLRYLEMQGLGWPLGFLMRSCAMIRN 60
           MKFEEVMKE+ESRGV LPSDMLEAAKSEGIRKLLLLRYLEMQGLGWPLGFLMRSCA+IRN
Sbjct: 158 MKFEEVMKELESRGVTLPSDMLEAAKSEGIRKLLLLRYLEMQGLGWPLGFLMRSCALIRN 217

Query: 61  RVLADPSFFFKVGVELVIDSCCATFAEVQKRGKDFWTEFELYLADILVGVAVNFALVALL 120
           RVLADPSFFFKVGVELVIDSCCATFAEVQKRGKDFWTEFELYLADILVGVAVNFALVALL
Sbjct: 218 RVLADPSFFFKVGVELVIDSCCATFAEVQKRGKDFWTEFELYLADILVGVAVNFALVALL 277

Query: 121 APYARFGQPSVSKGFLGRIHHACEALPSSVFEAERPGCRFSVQQRVATFFYKGLVYGVVG 180
           APYARFGQPSVSKGFLGRI HACEALPSSVFEAERPGCRFSVQQR+ATFFYKGLVYGVVG
Sbjct: 278 APYARFGQPSVSKGFLGRIQHACEALPSSVFEAERPGCRFSVQQRIATFFYKGLVYGVVG 337

Query: 181 FGCGIIGQGIANLIMTAKRSIKKSEDEVPVPPLFKSAALWGVFLAVSSNTRYQIINGLER 240
           FGCGIIGQGIANLIMTAKRSIKKSEDEVPVPPLFKSAALWGVFLA+SSNTRYQIINGLER
Sbjct: 338 FGCGIIGQGIANLIMTAKRSIKKSEDEVPVPPLFKSAALWGVFLALSSNTRYQIINGLER 397

Query: 241 VVESSPLAKNIPAVALAFTVGIRFGNNVYAGMQFIDWARWSGVQ 285
           VVESSPLAKNIPAVA+AFTVGIRFGNNVYAGMQFIDWARWSGVQ
Sbjct: 398 VVESSPLAKNIPAVAMAFTVGIRFGNNVYAGMQFIDWARWSGVQ 441

[Close]

BLAST of HG10020351 vs. ExPASy TrEMBL
Match: A0A1S3B6H2 (protein RETICULATA, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC103486354 PE=3 SV=1)

HSP 1 Score: 558.5 bits (1438), Expect = 2.3e-155
Identity = 277/284 (97.54%), Postives = 282/284 (99.30%), Query Frame = 0


Query: 1   MKFEEVMKEVESRGVALPSDMLEAAKSEGIRKLLLLRYLEMQGLGWPLGFLMRSCAMIRN 60
           MKFEEVMKE+ESRGV LPSDMLEAAKSEGIRKLLLLRYLEMQGLGWPLGFLMRSCA+IRN
Sbjct: 158 MKFEEVMKELESRGVTLPSDMLEAAKSEGIRKLLLLRYLEMQGLGWPLGFLMRSCALIRN 217

Query: 61  RVLADPSFFFKVGVELVIDSCCATFAEVQKRGKDFWTEFELYLADILVGVAVNFALVALL 120
           RVLADPSFFFKVGVELVIDSCCATFAEVQKRGKDFWTEFELYLADILVGVAVNFALVALL
Sbjct: 218 RVLADPSFFFKVGVELVIDSCCATFAEVQKRGKDFWTEFELYLADILVGVAVNFALVALL 277

Query: 121 APYARFGQPSVSKGFLGRIHHACEALPSSVFEAERPGCRFSVQQRVATFFYKGLVYGVVG 180
           APYARFGQPSVSKGFLGRI HACEALPSSVFEAERPGCRFSVQQR+ATFFYKGLVYGVVG
Sbjct: 278 APYARFGQPSVSKGFLGRIQHACEALPSSVFEAERPGCRFSVQQRIATFFYKGLVYGVVG 337

Query: 181 FGCGIIGQGIANLIMTAKRSIKKSEDEVPVPPLFKSAALWGVFLAVSSNTRYQIINGLER 240
           FGCGIIGQGIANLIMTAKRSIKKSEDEVPVPPLFKSAALWGVFLA+SSNTRYQIINGLER
Sbjct: 338 FGCGIIGQGIANLIMTAKRSIKKSEDEVPVPPLFKSAALWGVFLALSSNTRYQIINGLER 397

Query: 241 VVESSPLAKNIPAVALAFTVGIRFGNNVYAGMQFIDWARWSGVQ 285
           VVESSPLAKNIPAVA+AFTVGIRFGNNVYAGMQFIDWARWSGVQ
Sbjct: 398 VVESSPLAKNIPAVAMAFTVGIRFGNNVYAGMQFIDWARWSGVQ 441

[Close]

BLAST of HG10020351 vs. ExPASy TrEMBL
Match: A0A0A0LFH3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G733360 PE=3 SV=1)

HSP 1 Score: 557.8 bits (1436), Expect = 3.9e-155
Identity = 277/284 (97.54%), Postives = 282/284 (99.30%), Query Frame = 0


Query: 1   MKFEEVMKEVESRGVALPSDMLEAAKSEGIRKLLLLRYLEMQGLGWPLGFLMRSCAMIRN 60
           MKFEEVMKE+ESRGV LPSDMLEAAKSEGIRKLLLLRYLEMQGLGWPLGFLMRSCAMIRN
Sbjct: 156 MKFEEVMKELESRGVTLPSDMLEAAKSEGIRKLLLLRYLEMQGLGWPLGFLMRSCAMIRN 215

Query: 61  RVLADPSFFFKVGVELVIDSCCATFAEVQKRGKDFWTEFELYLADILVGVAVNFALVALL 120
           RVLADPSFFFKVGVELVIDSCCATFAEVQKRGKDFWTEFELYLADILVGVAVNFALVALL
Sbjct: 216 RVLADPSFFFKVGVELVIDSCCATFAEVQKRGKDFWTEFELYLADILVGVAVNFALVALL 275

Query: 121 APYARFGQPSVSKGFLGRIHHACEALPSSVFEAERPGCRFSVQQRVATFFYKGLVYGVVG 180
           APYARFGQPSVSKGFLGRI HACEALPSSVFEAERPGCRFSVQQR+ATFFYKGLVYGVVG
Sbjct: 276 APYARFGQPSVSKGFLGRIQHACEALPSSVFEAERPGCRFSVQQRIATFFYKGLVYGVVG 335

Query: 181 FGCGIIGQGIANLIMTAKRSIKKSEDEVPVPPLFKSAALWGVFLAVSSNTRYQIINGLER 240
           FGCGIIGQGIANLIMTAKRSIKKSE+EVPVPPLFKSAALWGVFLA+SSNTRYQIINGLER
Sbjct: 336 FGCGIIGQGIANLIMTAKRSIKKSENEVPVPPLFKSAALWGVFLALSSNTRYQIINGLER 395

Query: 241 VVESSPLAKNIPAVALAFTVGIRFGNNVYAGMQFIDWARWSGVQ 285
           VVESSPLAKNIPAVA+AFTVGIRFGNNVYAGMQFIDWARWSGVQ
Sbjct: 396 VVESSPLAKNIPAVAMAFTVGIRFGNNVYAGMQFIDWARWSGVQ 439

[Close]

BLAST of HG10020351 vs. ExPASy TrEMBL
Match: A0A6J1CWQ6 (protein RETICULATA, chloroplastic-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111014999 PE=3 SV=1)

HSP 1 Score: 544.7 bits (1402), Expect = 3.4e-151
Identity = 268/284 (94.37%), Postives = 278/284 (97.89%), Query Frame = 0


Query: 1   MKFEEVMKEVESRGVALPSDMLEAAKSEGIRKLLLLRYLEMQGLGWPLGFLMRSCAMIRN 60
           MKFEEVMKE+ESRGV LPSDMLEAAKS GIRKLLLLRYLEMQGLGWPLGFLM+SC+MIRN
Sbjct: 152 MKFEEVMKEMESRGVTLPSDMLEAAKSVGIRKLLLLRYLEMQGLGWPLGFLMKSCSMIRN 211

Query: 61  RVLADPSFFFKVGVELVIDSCCATFAEVQKRGKDFWTEFELYLADILVGVAVNFALVALL 120
           RVLADPSFFFKVGVELVIDSCCATFAEVQKRGKDFWTEFELYLADILVGVAVNFALVALL
Sbjct: 212 RVLADPSFFFKVGVELVIDSCCATFAEVQKRGKDFWTEFELYLADILVGVAVNFALVALL 271

Query: 121 APYARFGQPSVSKGFLGRIHHACEALPSSVFEAERPGCRFSVQQRVATFFYKGLVYGVVG 180
           APYARFGQPSVSKGFLGRI HAC ALPSSVFEAERPGCRFS+QQR+ATFFYKG VYG VG
Sbjct: 272 APYARFGQPSVSKGFLGRIQHACGALPSSVFEAERPGCRFSIQQRIATFFYKGFVYGAVG 331

Query: 181 FGCGIIGQGIANLIMTAKRSIKKSEDEVPVPPLFKSAALWGVFLAVSSNTRYQIINGLER 240
           FGCGIIGQGIANLIMTAKRSIKKSE++VPVPPLFKSAALWGVFLA+SSNTRYQIINGLER
Sbjct: 332 FGCGIIGQGIANLIMTAKRSIKKSENDVPVPPLFKSAALWGVFLAISSNTRYQIINGLER 391

Query: 241 VVESSPLAKNIPAVALAFTVGIRFGNNVYAGMQFIDWARWSGVQ 285
           VVESSPLAK+IPAVALAFTVGIRFGNNVYAGMQF+DWARWSGVQ
Sbjct: 392 VVESSPLAKHIPAVALAFTVGIRFGNNVYAGMQFVDWARWSGVQ 435

[Close]

BLAST of HG10020351 vs. ExPASy TrEMBL
Match: A0A6J1J3N1 (protein RETICULATA, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111481511 PE=3 SV=1)

HSP 1 Score: 536.6 bits (1381), Expect = 9.4e-149
Identity = 266/284 (93.66%), Postives = 274/284 (96.48%), Query Frame = 0


Query: 1   MKFEEVMKEVESRGVALPSDMLEAAKSEGIRKLLLLRYLEMQGLGWPLGFLMRSCAMIRN 60
           MKF+EVMKEVESRGV+LPSDMLEAAKSEGIRKLLLLRYLEMQGLGWPLGFLM+SCAMIRN
Sbjct: 146 MKFDEVMKEVESRGVSLPSDMLEAAKSEGIRKLLLLRYLEMQGLGWPLGFLMKSCAMIRN 205

Query: 61  RVLADPSFFFKVGVELVIDSCCATFAEVQKRGKDFWTEFELYLADILVGVAVNFALVALL 120
           R+LADPSFFFKVGVELVIDSCCATFAEVQKRGKDFWTEFELYLADILVGV VNFALVALL
Sbjct: 206 RMLADPSFFFKVGVELVIDSCCATFAEVQKRGKDFWTEFELYLADILVGVGVNFALVALL 265

Query: 121 APYARFGQPSVSKGFLGRIHHACEALPSSVFEAERPGCRFSVQQRVATFFYKGLVYGVVG 180
           APYARFGQPSVSKGFLGR  HACEALPSSVFEAERPGCRFSVQQR+ TFFYKGL+YG +G
Sbjct: 266 APYARFGQPSVSKGFLGRTLHACEALPSSVFEAERPGCRFSVQQRILTFFYKGLMYGAIG 325

Query: 181 FGCGIIGQGIANLIMTAKRSIKKSEDEVPVPPLFKSAALWGVFLAVSSNTRYQIINGLER 240
           FGCGIIGQGIANLIM +KRSIKKSEDEVPVPPL KSAALWGVFLAVSSNTRYQIINGLER
Sbjct: 326 FGCGIIGQGIANLIMISKRSIKKSEDEVPVPPLLKSAALWGVFLAVSSNTRYQIINGLER 385

Query: 241 VVESSPLAKNIPAVALAFTVGIRFGNNVYAGMQFIDWARWSGVQ 285
           VVESS LAK IP VALAFTVGIRFGNNVYAGMQFIDWARWSGVQ
Sbjct: 386 VVESSALAKYIPTVALAFTVGIRFGNNVYAGMQFIDWARWSGVQ 429

[Close]

BLAST of HG10020351 vs. TAIR 10
Match: AT5G22790.1 (reticulata-related 1 )

HSP 1 Score: 453.8 bits (1166), Expect = 1.5e-127
Identity = 219/285 (76.84%), Postives = 248/285 (87.02%), Query Frame = 0


Query: 1   MKFEEVMKEVESRGVALPSDMLEAAKSEGIRKLLLLRYLEMQGLGWPLGFLMRSCAMIRN 60
           +KFEEVMKE E RG+ LP DMLEAAKS GIRKL LLRYL++QG  WPLGFLMRSCAM+RN
Sbjct: 149 LKFEEVMKETERRGITLPEDMLEAAKSVGIRKLFLLRYLDLQGSVWPLGFLMRSCAMLRN 208

Query: 61  RVLADPSFFFKVGVELVIDSCCATFAEVQKRGKDFWTEFELYLADILVGVAVNFALVALL 120
           R+LADPSF FKVG E+ IDSCCATFAEVQKRG+DFW+EFELY AD+LVG+ V+ ALV LL
Sbjct: 209 RMLADPSFLFKVGTEVAIDSCCATFAEVQKRGEDFWSEFELYAADLLVGLVVDVALVGLL 268

Query: 121 APYARFGQPSV-SKGFLGRIHHACEALPSSVFEAERPGCRFSVQQRVATFFYKGLVYGVV 180
           APYAR G+PSV S G    +  AC +LPSSVFEAERPGC+FSV QR+ATFFYKGL+YG V
Sbjct: 269 APYARIGKPSVASTGLFKDLKRACASLPSSVFEAERPGCKFSVNQRIATFFYKGLLYGSV 328

Query: 181 GFGCGIIGQGIANLIMTAKRSIKKSEDEVPVPPLFKSAALWGVFLAVSSNTRYQIINGLE 240
           GFGCG+IGQGIANLIMTAKRS+KKSE++VP+PPLF+SAALWGVFL +SSN RYQIINGLE
Sbjct: 329 GFGCGLIGQGIANLIMTAKRSVKKSEEDVPIPPLFESAALWGVFLGLSSNARYQIINGLE 388

Query: 241 RVVESSPLAKNIPAVALAFTVGIRFGNNVYAGMQFIDWARWSGVQ 285
           RVVE S  AK IP VA+AFTVG+RF NNVY GMQF+DWA+ SGVQ
Sbjct: 389 RVVEGSTAAKRIPVVAMAFTVGVRFANNVYGGMQFVDWAKLSGVQ 433

[Close]

BLAST of HG10020351 vs. TAIR 10
Match: AT2G37860.3 (Protein of unknown function (DUF3411) )

HSP 1 Score: 445.3 bits (1144), Expect = 5.5e-125
Identity = 214/284 (75.35%), Postives = 243/284 (85.56%), Query Frame = 0


Query: 1   MKFEEVMKEVESRGVALPSDMLEAAKSEGIRKLLLLRYLEMQGLGWPLGFLMRSCAMIRN 60
           +KFEEVMKE E+RG  LPSDMLEAAK+ GIRK+LLLRYL++Q     LGF +RS AM+RN
Sbjct: 149 LKFEEVMKETEARGATLPSDMLEAAKNYGIRKVLLLRYLDLQSSAGLLGFAIRSWAMLRN 208

Query: 61  RVLADPSFFFKVGVELVIDSCCATFAEVQKRGKDFWTEFELYLADILVGVAVNFALVALL 120
           R+LADPSF FK+G E+VIDSCCAT AEVQKRGKDFW EFELY+AD+LVG  VN ALV +L
Sbjct: 209 RMLADPSFLFKIGAEIVIDSCCATVAEVQKRGKDFWAEFELYVADLLVGTVVNIALVGML 268

Query: 121 APYARFGQPSVSKGFLGRIHHACEALPSSVFEAERPGCRFSVQQRVATFFYKGLVYGVVG 180
           APY RFGQPS S GFLGR+  A  ALPSSVFEAERPGCRFS QQR+AT+FYKG++YG VG
Sbjct: 269 APYVRFGQPSASPGFLGRMVFAYNALPSSVFEAERPGCRFSAQQRLATYFYKGIMYGAVG 328

Query: 181 FGCGIIGQGIANLIMTAKRSIKKSEDEVPVPPLFKSAALWGVFLAVSSNTRYQIINGLER 240
           FGCGI+GQGIANLIMTAKR+I KSE+ +PVPPL KSAALWGVFL+VSSNTRYQIINGLER
Sbjct: 329 FGCGIVGQGIANLIMTAKRNINKSEENIPVPPLIKSAALWGVFLSVSSNTRYQIINGLER 388

Query: 241 VVESSPLAKNIPAVALAFTVGIRFGNNVYAGMQFIDWARWSGVQ 285
           VVE+SP AK  P  A+AFTVG+R  NN+Y GMQF+DWAR SG Q
Sbjct: 389 VVEASPFAKKFPPAAMAFTVGVRLANNIYGGMQFVDWARLSGCQ 432

[Close]

BLAST of HG10020351 vs. TAIR 10
Match: AT2G37860.2 (Protein of unknown function (DUF3411) )

HSP 1 Score: 311.2 bits (796), Expect = 1.2e-84
Identity = 151/199 (75.88%), Postives = 171/199 (85.93%), Query Frame = 0


Query: 1   MKFEEVMKEVESRGVALPSDMLEAAKSEGIRKLLLLRYLEMQGLGWPLGFLMRSCAMIRN 60
           +KFEEVMKE E+RG  LPSDMLEAAK+ GIRK+LLLRYL++Q     LGF +RS AM+RN
Sbjct: 149 LKFEEVMKETEARGATLPSDMLEAAKNYGIRKVLLLRYLDLQSSAGLLGFAIRSWAMLRN 208

Query: 61  RVLADPSFFFKVGVELVIDSCCATFAEVQKRGKDFWTEFELYLADILVGVAVNFALVALL 120
           R+LADPSF FK+G E+VIDSCCAT AEVQKRGKDFW EFELY+AD+LVG  VN ALV +L
Sbjct: 209 RMLADPSFLFKIGAEIVIDSCCATVAEVQKRGKDFWAEFELYVADLLVGTVVNIALVGML 268

Query: 121 APYARFGQPSVSKGFLGRIHHACEALPSSVFEAERPGCRFSVQQRVATFFYKGLVYGVVG 180
           APY RFGQPS S GFLGR+  A  ALPSSVFEAERPGCRFS QQR+AT+FYKG++YG VG
Sbjct: 269 APYVRFGQPSASPGFLGRMVFAYNALPSSVFEAERPGCRFSAQQRLATYFYKGIMYGAVG 328

Query: 181 FGCGIIGQGIANLIMTAKR 200
           FGCGI+GQGIANLIMTAKR
Sbjct: 329 FGCGIVGQGIANLIMTAKR 347

[Close]

BLAST of HG10020351 vs. TAIR 10
Match: AT2G37860.1 (Protein of unknown function (DUF3411) )

HSP 1 Score: 311.2 bits (796), Expect = 1.2e-84
Identity = 151/199 (75.88%), Postives = 171/199 (85.93%), Query Frame = 0


Query: 1   MKFEEVMKEVESRGVALPSDMLEAAKSEGIRKLLLLRYLEMQGLGWPLGFLMRSCAMIRN 60
           +KFEEVMKE E+RG  LPSDMLEAAK+ GIRK+LLLRYL++Q     LGF +RS AM+RN
Sbjct: 149 LKFEEVMKETEARGATLPSDMLEAAKNYGIRKVLLLRYLDLQSSAGLLGFAIRSWAMLRN 208

Query: 61  RVLADPSFFFKVGVELVIDSCCATFAEVQKRGKDFWTEFELYLADILVGVAVNFALVALL 120
           R+LADPSF FK+G E+VIDSCCAT AEVQKRGKDFW EFELY+AD+LVG  VN ALV +L
Sbjct: 209 RMLADPSFLFKIGAEIVIDSCCATVAEVQKRGKDFWAEFELYVADLLVGTVVNIALVGML 268

Query: 121 APYARFGQPSVSKGFLGRIHHACEALPSSVFEAERPGCRFSVQQRVATFFYKGLVYGVVG 180
           APY RFGQPS S GFLGR+  A  ALPSSVFEAERPGCRFS QQR+AT+FYKG++YG VG
Sbjct: 269 APYVRFGQPSASPGFLGRMVFAYNALPSSVFEAERPGCRFSAQQRLATYFYKGIMYGAVG 328

Query: 181 FGCGIIGQGIANLIMTAKR 200
           FGCGI+GQGIANLIMTAKR
Sbjct: 329 FGCGIVGQGIANLIMTAKR 347

[Close]

BLAST of HG10020351 vs. TAIR 10
Match: AT5G12470.1 (Protein of unknown function (DUF3411) )

HSP 1 Score: 124.0 bits (310), Expect = 2.8e-28
Identity = 84/288 (29.17%), Postives = 146/288 (50.69%), Query Frame = 0


Query: 6   VMKEVESRGVALPSDMLEAAKSEGIRKLLLLRYLEMQG---LGWPLGFLMRSCAMIRNRV 65
           ++KE      +LP D+  A ++  I   ++ R+LE+Q    + W + F        R R+
Sbjct: 108 LLKESGIELESLPKDLAAAIEAGRIPGSVITRFLELQKSAVMRWLMQF-----GGFRERL 167

Query: 66  LADPSFFFKVGVELVIDSCCATFAEVQKRGKDFWTEFELYLADILVGVAVNFALVALLAP 125
           LAD  F  K+ +E  +     T AE ++R ++F+ E E+  AD+ + +  +F LV L AP
Sbjct: 168 LADDLFMAKLAMECGVGIFTKTAAEYERRRENFFNELEVVFADVAMAIIADFMLVYLPAP 227

Query: 126 YARFGQP-SVSKGFLGRIHHACEALPSSVFEAERPGCRFSVQQRVATFFYKGLVYGVVGF 185
                 P +++ G + +  H C   P + F+    G  +++ QR+      G     VG 
Sbjct: 228 TVSLRPPLALTAGGISKFFHNC---PDNAFQVALSGTSYTLLQRLGAITRNGAKLFAVGT 287

Query: 186 GCGIIGQGIANLIMTAKRSI-KKSEDEVPVPPLFKSAALWGVFLAVSSNTRYQIINGL-- 245
              ++G  I N  + A++++ + SE EV   P+  ++  +GV++AVSSN RYQI+ G+  
Sbjct: 288 TSSLVGTAITNAFIKARKAVDQNSEGEVETVPIVSTSVAYGVYMAVSSNLRYQIVAGVIE 347

Query: 246 ERVVESSPLAKNIPAVALAFTVGIRFGNNVYAGMQFIDWARWSGVQGS 287
           +R++E       +   AL F V  R GN     + ++D+AR  G+Q S
Sbjct: 348 QRLLEPMLHQHKLALSALCFAV--RTGNTFLGSLLWVDYARLIGIQKS 385

The following BLAST results are available for this feature:

BLAST of HG10020351 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038903927.1	7.3e-156	97.89	protein RETICULATA, chloroplastic-like [Benincasa hispida]	[more]
XP_008442503.1	4.8e-155	97.54	PREDICTED: protein RETICULATA, chloroplastic-like [Cucumis melo] >KAA0044123.1 p...	[more]
XP_004137924.1	8.1e-155	97.54	protein RETICULATA, chloroplastic [Cucumis sativus] >XP_031738607.1 protein RETI...	[more]
KAG5554021.1	1.4e-154	63.11	hypothetical protein RHGRI_011779 [Rhododendron griersonianum]	[more]
XP_022145581.1	7.1e-151	94.37	protein RETICULATA, chloroplastic-like isoform X1 [Momordica charantia]	[more]

BLAST of HG10020351 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FGP9	2.2e-126	76.84	Protein RETICULATA-RELATED 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=R...	[more]
B9DFK5	7.7e-124	75.35	Protein RETICULATA, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RE PE=1 SV=...	[more]
Q94CJ5	3.9e-27	29.17	Protein RETICULATA-RELATED 4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=R...	[more]
Q9C9Z3	3.4e-23	32.08	Protein RETICULATA-RELATED 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=R...	[more]
Q8RWG3	3.9e-19	28.45	Protein RETICULATA-RELATED 6, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=R...	[more]

BLAST of HG10020351 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TKU7	2.3e-155	97.54	Protein RETICULATA OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G0...	[more]
A0A1S3B6H2	2.3e-155	97.54	protein RETICULATA, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC103486354 P...	[more]
A0A0A0LFH3	3.9e-155	97.54	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G733360 PE=3 SV=1	[more]
A0A6J1CWQ6	3.4e-151	94.37	protein RETICULATA, chloroplastic-like isoform X1 OS=Momordica charantia OX=3673...	[more]
A0A6J1J3N1	9.4e-149	93.66	protein RETICULATA, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC1114815...	[more]

BLAST of HG10020351 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G22790.1	1.5e-127	76.84	reticulata-related 1	[more]
AT2G37860.3	5.5e-125	75.35	Protein of unknown function (DUF3411)	[more]
AT2G37860.2	1.2e-84	75.88	Protein of unknown function (DUF3411)	[more]
AT2G37860.1	1.2e-84	75.88	Protein of unknown function (DUF3411)	[more]
AT5G12470.1	2.8e-28	29.17	Protein of unknown function (DUF3411)	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001372	Dynein light chain, type 1/2	SMART	SM01375	Dynein_light_2	coord: 308..397 e-value: 8.0E-39 score: 145.0
IPR001372	Dynein light chain, type 1/2	PFAM	PF01221	Dynein_light	coord: 312..396 e-value: 3.3E-29 score: 101.1
IPR021825	Protein RETICULATA-related	PFAM	PF11891	RETICULATA-like	coord: 60..238 e-value: 1.8E-66 score: 223.3
IPR037177	Dynein light chain superfamily	GENE3D	3.30.740.10	Protein Inhibitor Of Neuronal Nitric Oxide Synthase;	coord: 305..397 e-value: 2.6E-29 score: 103.1
IPR037177	Dynein light chain superfamily	SUPERFAMILY	54648	DLC	coord: 307..397
None	No IPR available	PANTHER	PTHR31038:SF18	PROTEIN RETICULATA-RELATED 1, CHLOROPLASTIC	coord: 1..284
None	No IPR available	PANTHER	PTHR31038	EXPRESSED PROTEIN-RELATED	coord: 1..284

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10020351.1	HG10020351.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007017	microtubule-based process
biological_process	GO:0099402	plant organ development
cellular_component	GO:0031969	chloroplast membrane
cellular_component	GO:0030286	dynein complex
cellular_component	GO:0016021	integral component of membrane