HG10020309 (gene) Bottle gourd (Hangzhou Gourd) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCTGCTCCACACAAAACTGCATTTCTTCACACTTCAAACTTCACTCACCCTGTTCTTGCAGCGCCAAATGCCAGCCATGTCATGCAATTTTGCAAGACCTCAATCGTACATTCTTGTTTTCTCTCTATAATTTACGGTTTTTTGCTTGTTTCTTCTTTGTCCATTCTTGTTCGTCGATTTCTTCCGTTTAATTATTGCTCCTTCCTTCTCCTCAATTCTATTATGGTATCATCGGATTTGACTCTTCGTCGTATCTCTGAAACTCTGAACTGATCTCTTCCTCTTTCTTCTGGTTCATTATTGCACTTGATGCTTTCAGATTCAACTATGGCTCGACAGGTACCTCTCTCTCTCTCTCTCTCTCTGTGTGTGTGTGTGTGTATGTGTGATTTTGCCCTAATTTGGCGTTTGATTTCGGAATGTAGGAAGATGGATGGCCATTAGGCTTGCGGCTTATGAACGCTAGAGTTGGATTGGCGGGAAATCATGATCTCTCTGCGTCGGTTTCTTTCAATACTTTGCTTACTCATTCTCCTAGTTCCTTCACCGACTCTTCCTCAGATCTTGATACAGAGGTCTGCTACTTCCTTTTGGTTTTTTTTTTTTTCCTTCTCTGTTTCTCTTTTGTTTAACTGTGTGTTCGTTAGAGGCTGAAAATGTAGCACATTATGCTTGGTTTGTGTTGGGAAAGACTTGAGTCTTAATAATGGTTGATTATAGTAGAATTGCTTTTGTTTTTAAGATTTCGGTTCAATTATGCAAATACATTGCATTGAGTCGTGTCACTGTTAGGAGTAGGACTGCTTTTTCATGTCTTATTTTTCTGAAGGGATTGAGTTGAAGTAGTTGCAGAGTACCCCTTTTTCAAAATTTGTACTGATTTTCTTTAAAGTTCAATTAGCCTAGGCCACAGAGTATAGGGATATGGATGTATTAGTGATTAAAAATTTTGTAGTTCGAATCACTAAAAAAAAAAGCTATGTGATACAGGCCTTGTTTGAATGTTGCAATGATTTTATGAGAAAATGTCAACTGTTTTGGAAGCTCAAAATGATAAATGCCCACTTTTTAAAAACTATTGCTAATTGACCTTCTGCTGATATCATGCATATGTAATTATCGATTGGCCCTTCATTCTTCAAAATTTTCTACTAGTCACGCGCCTGTCTTCTTCTTTCTCTTTTCTTTGAGGAGTTTTTTTTTCTTCTTCTTCTTCTTTTCTTCTTCATCTTCTTCTCTGAAGGTTAGTGCAAAGATTTTTTTCTTCTTCCTCTTCTCCGGCGAGCAACCATACCAGATATCTGGCAAGCTCCAACTTGCACATGCTGGCAGCGAGCGCCCAAATGCCGGAGAGAACGAGAGAGCGAAACAATGAGAGAGATGAGAGCAATATGTGAGTGAAGGATAGAGAATGAGAGAGAGGAGCGAGAGCAAGAGAGCGAAGAGCGTGATTGGTCCTTCCACATGCGTAAGAGAGTTTTGTTTTGTAATTTCACCGGTGTCAACGTCAACAAATGGTAAAAAAAATCCTCATTTTCAAAAAGTGAGCCAAATCTCATTTTTCCCTCTCAATTTGGGTTATCCATATAAAAACCCTCGACTTTATTAATGTTTTAAAAAGAGCTTTTAAGTACAAATAAAGTATTTTTAAATACTTAAAAGTCAATCTAAATAGATCAATAACCTAAATAGTAAACTGTAGAATTTTACTCTAAAAAACTTTGTTTTTTTTTATTTATTTTAAATTTTATACGGATGATCTAATGAGTTGTGCCGAAATTGATATTTGATTTTGAGAAATTTTCTAAATCACTAACATCAACATTTTTTTTTTCTCTCGCTCCTTACCTTCCCTCTCATTAGTCATTCCTCACTTTTCCTCTTGCCCTTGCTCTTTTGCTCTTGCTTCTTATTTGTCCTCTCTTGCTCCCTATCCCAACAAGGGCTTAATTGGAAGTGTAGCCATAAAAGGAGAGGGGGAAAATAGCTAGACAAGAGGAAAATGGGTAGCAAGAGCCCGATAATAAAGAACATCAAATAAGCTTGCTGACATTAGCAAATTGTTAGACAATTTTATGTCGAGAAATCAAGTCAAATTTCATTTTTGCGCAAATATTTAGGTTAGTCTGTGAAAATACTCAAAGACTTTTGTATGGTTATTTTGGTCCGTATTTGCTAAATTTCATCATGTTAATGGTTTTTAGTCAACTGGATCATTCTACCATGATAAGAGCATCACTCTTGGGAGTCTCATTGGAGTCTCTAGCATTTTTGAGCTATCGCGAAGATCGACGAAAGGAAATGAAGTGGAAATACTCGAAGATAAAAAGAAGTACAAGTCCAAACCATGGTTGTTTTCTTTATCTTTATGCATTAAACTCCGCCCTGATGCTGTGAGCTTGAACAGCTCTCCTTCACTTGAGCACTCTCTTGAAGCAGAAAAGAGAGCTACAAGAAATCACAGGATTCACAACCCTACCCTTTATGGACCCAATGATTACTCACCTATTCGTCCTGTAACTGTTTCTGGAACAAACTCTTTGTTTTCCAGTGATCAAGTTGCTCCTGTCTCATTTGAACCGGCGGGGGAAGAAGAAAGCAGAAGATCAAATGAAGAACTTGTTCAAGATGGTAACAGCCAAGGGATTCCTCTACTCTTTTCATGTCTATATTGTCAACTGATTAAATAA ATGTCTGCTCCACACAAAACTGCATTTCTTCACACTTCAAACTTCACTCACCCTGTTCTTGCAGCGCCAAATGCCAGCCATGTCATGCAATTTTGCAAGACCTCAATCGAAGATGGATGGCCATTAGGCTTGCGGCTTATGAACGCTAGAGTTGGATTGGCGGGAAATCATGATCTCTCTGCGTCGGTTTCTTTCAATACTTTGCTTACTCATTCTCCTAGTTCCTTCACCGACTCTTCCTCAGATCTTGATACAGAGTCAACTGGATCATTCTACCATGATAAGAGCATCACTCTTGGGAGTCTCATTGGAGTCTCTAGCATTTTTGAGCTATCGCGAAGATCGACGAAAGGAAATGAAGTGGAAATACTCGAAGATAAAAAGAAGTACAAGTCCAAACCATGGTTGTTTTCTTTATCTTTATGCATTAAACTCCGCCCTGATGCTGTGAGCTTGAACAGCTCTCCTTCACTTGAGCACTCTCTTGAAGCAGAAAAGAGAGCTACAAGAAATCACAGGATTCACAACCCTACCCTTTATGGACCCAATGATTACTCACCTATTCGTCCTGTAACTGTTTCTGGAACAAACTCTTTGTTTTCCAGTGATCAAGTTGCTCCTGTCTCATTTGAACCGGCGGGGGAAGAAGAAAGCAGAAGATCAAATGAAGAACTTGTTCAAGATGGTAACAGCCAAGGGATTCCTCTACTCTTTTCATGTCTATATTGTCAACTGATTAAATAA ATGTCTGCTCCACACAAAACTGCATTTCTTCACACTTCAAACTTCACTCACCCTGTTCTTGCAGCGCCAAATGCCAGCCATGTCATGCAATTTTGCAAGACCTCAATCGAAGATGGATGGCCATTAGGCTTGCGGCTTATGAACGCTAGAGTTGGATTGGCGGGAAATCATGATCTCTCTGCGTCGGTTTCTTTCAATACTTTGCTTACTCATTCTCCTAGTTCCTTCACCGACTCTTCCTCAGATCTTGATACAGAGTCAACTGGATCATTCTACCATGATAAGAGCATCACTCTTGGGAGTCTCATTGGAGTCTCTAGCATTTTTGAGCTATCGCGAAGATCGACGAAAGGAAATGAAGTGGAAATACTCGAAGATAAAAAGAAGTACAAGTCCAAACCATGGTTGTTTTCTTTATCTTTATGCATTAAACTCCGCCCTGATGCTGTGAGCTTGAACAGCTCTCCTTCACTTGAGCACTCTCTTGAAGCAGAAAAGAGAGCTACAAGAAATCACAGGATTCACAACCCTACCCTTTATGGACCCAATGATTACTCACCTATTCGTCCTGTAACTGTTTCTGGAACAAACTCTTTGTTTTCCAGTGATCAAGTTGCTCCTGTCTCATTTGAACCGGCGGGGGAAGAAGAAAGCAGAAGATCAAATGAAGAACTTGTTCAAGATGGTAACAGCCAAGGGATTCCTCTACTCTTTTCATGTCTATATTGTCAACTGATTAAATAA MSAPHKTAFLHTSNFTHPVLAAPNASHVMQFCKTSIEDGWPLGLRLMNARVGLAGNHDLSASVSFNTLLTHSPSSFTDSSSDLDTESTGSFYHDKSITLGSLIGVSSIFELSRRSTKGNEVEILEDKKKYKSKPWLFSLSLCIKLRPDAVSLNSSPSLEHSLEAEKRATRNHRIHNPTLYGPNDYSPIRPVTVSGTNSLFSSDQVAPVSFEPAGEEESRRSNEELVQDGNSQGIPLLFSCLYCQLIK Homology
BLAST of HG10020309 vs. NCBI nr
Match: XP_008442557.1 (PREDICTED: uncharacterized protein LOC103486392 [Cucumis melo]) HSP 1 Score: 349.4 bits (895), Expect = 2.6e-92 Identity = 184/212 (86.79%), Postives = 195/212 (91.98%), Query Frame = 0
BLAST of HG10020309 vs. NCBI nr
Match: KAA0044086.1 (uncharacterized protein E6C27_scaffold236G004360 [Cucumis melo var. makuwa] >TYK25051.1 uncharacterized protein E5676_scaffold352G001720 [Cucumis melo var. makuwa]) HSP 1 Score: 349.4 bits (895), Expect = 2.6e-92 Identity = 184/212 (86.79%), Postives = 195/212 (91.98%), Query Frame = 0
BLAST of HG10020309 vs. NCBI nr
Match: XP_011651900.1 (uncharacterized protein LOC101206844 [Cucumis sativus] >KGN58875.1 hypothetical protein Csa_001533 [Cucumis sativus]) HSP 1 Score: 347.8 bits (891), Expect = 7.6e-92 Identity = 184/212 (86.79%), Postives = 194/212 (91.51%), Query Frame = 0
BLAST of HG10020309 vs. NCBI nr
Match: XP_022145575.1 (uncharacterized protein LOC111014995 isoform X2 [Momordica charantia]) HSP 1 Score: 347.8 bits (891), Expect = 7.6e-92 Identity = 182/211 (86.26%), Postives = 191/211 (90.52%), Query Frame = 0
BLAST of HG10020309 vs. NCBI nr
Match: KAG6580547.1 (hypothetical protein SDJN03_20549, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 342.8 bits (878), Expect = 2.4e-90 Identity = 182/212 (85.85%), Postives = 189/212 (89.15%), Query Frame = 0
BLAST of HG10020309 vs. ExPASy Swiss-Prot
Match: Q6DR24 (Uncharacterized protein At3g17950 OS=Arabidopsis thaliana OX=3702 GN=Y-3 PE=1 SV=1) HSP 1 Score: 48.9 bits (115), Expect = 9.5e-05 Identity = 25/35 (71.43%), Postives = 31/35 (88.57%), Query Frame = 0
BLAST of HG10020309 vs. ExPASy TrEMBL
Match: A0A5A7TPR1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G001720 PE=4 SV=1) HSP 1 Score: 349.4 bits (895), Expect = 1.3e-92 Identity = 184/212 (86.79%), Postives = 195/212 (91.98%), Query Frame = 0
BLAST of HG10020309 vs. ExPASy TrEMBL
Match: A0A1S3B5Y9 (uncharacterized protein LOC103486392 OS=Cucumis melo OX=3656 GN=LOC103486392 PE=4 SV=1) HSP 1 Score: 349.4 bits (895), Expect = 1.3e-92 Identity = 184/212 (86.79%), Postives = 195/212 (91.98%), Query Frame = 0
BLAST of HG10020309 vs. ExPASy TrEMBL
Match: A0A0A0LA63 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G734280 PE=4 SV=1) HSP 1 Score: 347.8 bits (891), Expect = 3.7e-92 Identity = 184/212 (86.79%), Postives = 194/212 (91.51%), Query Frame = 0
BLAST of HG10020309 vs. ExPASy TrEMBL
Match: A0A6J1CUV3 (uncharacterized protein LOC111014995 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111014995 PE=4 SV=1) HSP 1 Score: 347.8 bits (891), Expect = 3.7e-92 Identity = 182/211 (86.26%), Postives = 191/211 (90.52%), Query Frame = 0
BLAST of HG10020309 vs. ExPASy TrEMBL
Match: A0A6J1CVN1 (uncharacterized protein LOC111014995 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111014995 PE=4 SV=1) HSP 1 Score: 341.7 bits (875), Expect = 2.6e-90 Identity = 182/216 (84.26%), Postives = 191/216 (88.43%), Query Frame = 0
BLAST of HG10020309 vs. TAIR 10
Match: AT5G02440.1 (unknown protein; Has 71 Blast hits to 71 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 71; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 96.3 bits (238), Expect = 3.7e-20 Identity = 70/171 (40.94%), Postives = 98/171 (57.31%), Query Frame = 0
BLAST of HG10020309 vs. TAIR 10
Match: AT3G17950.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; Has 63 Blast hits to 63 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 63; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 48.9 bits (115), Expect = 6.8e-06 Identity = 25/35 (71.43%), Postives = 31/35 (88.57%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
|