HG10020299 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview
NameHG10020299
Typegene
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionActin-depolymerizing factor
LocationChr04: 30664979 .. 30666765 (+)
RNA-Seq ExpressionHG10020299
SyntenyHG10020299
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTGAGTCCTCCGAAGCTTACTTAATTTCTGCTTTTATTCGTGATTTGACGATCGGTATGGTTCTTGAGAAAGTAGGATTGTATGTTTAGTTTGTCATTTTTAAAATCACTACACTCTCGCGATCGGGAGTTTCTTGCAATTTGTGGAGTTTGTGTACCTCTGGTACATGATTTTGAAGTAATAATCCGCATGCAGTTTCCAGGATGGGGAGTGAATGCATTATTGTTACATAAAGATCTGATTTGAATTCTACTGTGGTTTTCTTCAACTAAGCGAAACGTCATTTTCTTTAATTTACTATAGACTTCAGGTAATCCAGTGGCCTTGGATCTATTATGATCATCGTTTTGATTTTTGTACTTCTTATTTTGTTATGTTTGAAATTTCTGTCAATGATTGCAATTACAAGTTATATTCCTGTATTCTCCCTTTGAATTGCTATTAATCTTCTCTTTGCATGCTGTAAATGAAGTTGAGATTCCGTCGAGTTGTGAATTTGCTTTAAATTTGGTTGCAAATCAATATCAGCTATCAAGATATGAGGGGGGAAATCTTATCCTGCCCATTTACTTGTTACAAGATTATCTTACTTTGACTCGGTGTTTTCTAAAGCTACTAAAACGCAATAGCCCTTTGGAACTTAGAGGTTTCATCAGGCGCACAGTAGACAAATGTAAATGAAATTTTAATATAAGTAGAAAAACAGTAGGATGAATAAGAAGAAAATAGAGATTTCACTTGAGATTATAAGAAATTCTATGCATTTCTTTCTTGAAAATTAGAAAAATTAATAAAAGAGAGTAGGAAATCAGACTCGAGAGCTGAGGCGCACACTATAAGTGCTAAGGCGCATGCCTCAAGCGGGCTTTATTTAGGGAGCCTTTGCTTGAAAGGCTTCTTTGAAGCAAGGCACAGAGGTCGGGCTTAAGCGCATCTAGGAGCTTGACTCAACAGAAAATTTGACTAAATATGACCCCAAATTTATGGCTAAGATAAGGGCTCTCAAGGGAGAAAGAGAACAATTATTGAAAACTTGCAAAATCTGATCAGATCAGAAAGATTCTTTTGTTCCCAATTTTCTGCATTTCCAGTGTTAGGTTAAACAATATTCACCCCACTGTTTTGCTTTTGCAGCCTTTGTGTTTTATAGCTGTATTATAATATAATCAAGAGCATTTTATTTTCCAAGTTTGTTACTGCCGTTTCAATTCGTTATGTATGCATCTCTTTTGGACTTCGAAGGTTTTTTTTTTAAAAGTAGTTTCATTCTGGACTTTATAGGCCAATGCAGCATCGGGAATGGCCGTGAATGATGATTGCAAGCTGAAGTTTTTGGAGCTGAAAGCGAAAAGAACCTATCGCTTTATTGTGTTTAAGATCGAGGAGAAGCAAAAGCAAGTTGTAGTAGAGAAAGTTGGTGAGCCAACACAAAGTTATGAGGACTTTGCTGCAAGCCTCCCTTCAGACGAATGCCGTTATGCTATCTATGATTTCGACTTCGTTACCGAAGAGAACTGTCAGAAGAGCAGAATCTTCTTTATTGGCTGGTATAGCTAACATCTTCTTTACTATCCCTTTCATGTTTGTCTTTCCAACTATCACACGCTAACAAAAAAAACGCCATTCTTTGAAGGTCCCCTGATAATTCAAGAGTCAGAAGCAAGATGATATATGCAAGCTCCAAAGATAGATTCAAGAGAGAGCTGGATGGCTTTCAAGTTGAACTTCAAGCAACTGATCCGACCGAGATGGGTCTTGATGTCATTCGAAGCCGAGTTGGCTGA

mRNA sequence

ATGGCCAATGCAGCATCGGGAATGGCCGTGAATGATGATTGCAAGCTGAAGTTTTTGGAGCTGAAAGCGAAAAGAACCTATCGCTTTATTGTGTTTAAGATCGAGGAGAAGCAAAAGCAAGTTGTAGTAGAGAAAGTTGGTGAGCCAACACAAAGTTATGAGGACTTTGCTGCAAGCCTCCCTTCAGACGAATGCCGTTATGCTATCTATGATTTCGACTTCGTTACCGAAGAGAACTGTCAGAAGAGCAGAATCTTCTTTATTGGCTGGTCCCCTGATAATTCAAGAGTCAGAAGCAAGATGATATATGCAAGCTCCAAAGATAGATTCAAGAGAGAGCTGGATGGCTTTCAAGTTGAACTTCAAGCAACTGATCCGACCGAGATGGGTCTTGATGTCATTCGAAGCCGAGTTGGCTGA

Coding sequence (CDS)

ATGGCCAATGCAGCATCGGGAATGGCCGTGAATGATGATTGCAAGCTGAAGTTTTTGGAGCTGAAAGCGAAAAGAACCTATCGCTTTATTGTGTTTAAGATCGAGGAGAAGCAAAAGCAAGTTGTAGTAGAGAAAGTTGGTGAGCCAACACAAAGTTATGAGGACTTTGCTGCAAGCCTCCCTTCAGACGAATGCCGTTATGCTATCTATGATTTCGACTTCGTTACCGAAGAGAACTGTCAGAAGAGCAGAATCTTCTTTATTGGCTGGTCCCCTGATAATTCAAGAGTCAGAAGCAAGATGATATATGCAAGCTCCAAAGATAGATTCAAGAGAGAGCTGGATGGCTTTCAAGTTGAACTTCAAGCAACTGATCCGACCGAGATGGGTCTTGATGTCATTCGAAGCCGAGTTGGCTGA

Protein sequence

MANAASGMAVNDDCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKVGEPTQSYEDFAASLPSDECRYAIYDFDFVTEENCQKSRIFFIGWSPDNSRVRSKMIYASSKDRFKRELDGFQVELQATDPTEMGLDVIRSRVG
Homology
[Close]
BLAST of HG10020299 vs. NCBI nr
Match: XP_038905295.1 (actin-depolymerizing factor 2-like [Benincasa hispida] >XP_038905296.1 actin-depolymerizing factor 2-like [Benincasa hispida] >XP_038905297.1 actin-depolymerizing factor 2-like [Benincasa hispida])

HSP 1 Score: 276.6 bits (706), Expect = 1.2e-70
Identity = 138/139 (99.28%), Postives = 138/139 (99.28%), Query Frame = 0 

Query: 1   MANAASGMAVNDDCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKVGEPTQSYEDFAASL 60
           MANAASGMAVNDDCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKVGEPTQSYEDFAASL
Sbjct: 1   MANAASGMAVNDDCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKVGEPTQSYEDFAASL 60

Query: 61  PSDECRYAIYDFDFVTEENCQKSRIFFIGWSPDNSRVRSKMIYASSKDRFKRELDGFQVE 120
           PSDECRYAIYDFDFVTEENCQKSRIFFI WSPDNSRVRSKMIYASSKDRFKRELDGFQVE
Sbjct: 61  PSDECRYAIYDFDFVTEENCQKSRIFFIAWSPDNSRVRSKMIYASSKDRFKRELDGFQVE 120

Query: 121 LQATDPTEMGLDVIRSRVG 140
           LQATDPTEMGLDVIRSRVG
Sbjct: 121 LQATDPTEMGLDVIRSRVG 139

[Close]
BLAST of HG10020299 vs. NCBI nr
Match: XP_022935027.1 (actin-depolymerizing factor 2-like [Cucurbita moschata] >XP_023528602.1 actin-depolymerizing factor 2-like isoform X2 [Cucurbita pepo subsp. pepo] >KAG6580558.1 Actin-depolymerizing factor 2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 273.9 bits (699), Expect = 7.8e-70
Identity = 136/139 (97.84%), Postives = 138/139 (99.28%), Query Frame = 0 

Query: 1   MANAASGMAVNDDCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKVGEPTQSYEDFAASL 60
           MANAASG+AVNDDCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKVGEPTQSYEDFAASL
Sbjct: 1   MANAASGIAVNDDCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKVGEPTQSYEDFAASL 60

Query: 61  PSDECRYAIYDFDFVTEENCQKSRIFFIGWSPDNSRVRSKMIYASSKDRFKRELDGFQVE 120
           P+DECRYAIYDFDFVTEENCQKSRIFFI WSPDNSRVRSKMIYASSKDRFKRELDGFQVE
Sbjct: 61  PADECRYAIYDFDFVTEENCQKSRIFFIAWSPDNSRVRSKMIYASSKDRFKRELDGFQVE 120

Query: 121 LQATDPTEMGLDVIRSRVG 140
           LQATDPTEMGLDVIRSRVG
Sbjct: 121 LQATDPTEMGLDVIRSRVG 139

[Close]
BLAST of HG10020299 vs. NCBI nr
Match: XP_022945981.1 (actin-depolymerizing factor 2-like isoform X2 [Cucurbita moschata] >XP_022971271.1 actin-depolymerizing factor 2-like isoform X2 [Cucurbita maxima] >XP_023005853.1 actin-depolymerizing factor 2-like isoform X2 [Cucurbita maxima] >KAG6596418.1 Actin-depolymerizing factor 2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 272.3 bits (695), Expect = 2.3e-69
Identity = 135/139 (97.12%), Postives = 136/139 (97.84%), Query Frame = 0 

Query: 1   MANAASGMAVNDDCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKVGEPTQSYEDFAASL 60
           MANAASGMAVNDDCKLKFL LKAKRTYRFIVFKIEEKQKQVVVEKVGEPTQSYEDFAASL
Sbjct: 1   MANAASGMAVNDDCKLKFLALKAKRTYRFIVFKIEEKQKQVVVEKVGEPTQSYEDFAASL 60

Query: 61  PSDECRYAIYDFDFVTEENCQKSRIFFIGWSPDNSRVRSKMIYASSKDRFKRELDGFQVE 120
           PSDECRYA+YDFDFVTEENCQKSRIFFI WSPDNSRVRSKMIYASSKDRFKRELDGFQVE
Sbjct: 61  PSDECRYAVYDFDFVTEENCQKSRIFFIAWSPDNSRVRSKMIYASSKDRFKRELDGFQVE 120

Query: 121 LQATDPTEMGLDVIRSRVG 140
           LQATDPTEMGLDVIRSR G
Sbjct: 121 LQATDPTEMGLDVIRSRAG 139

[Close]
BLAST of HG10020299 vs. NCBI nr
Match: XP_022983563.1 (actin-depolymerizing factor 2-like [Cucurbita maxima])

HSP 1 Score: 272.3 bits (695), Expect = 2.3e-69
Identity = 135/139 (97.12%), Postives = 138/139 (99.28%), Query Frame = 0 

Query: 1   MANAASGMAVNDDCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKVGEPTQSYEDFAASL 60
           MANAASG+AVNDDCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKVGEPTQSYEDFAASL
Sbjct: 1   MANAASGIAVNDDCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKVGEPTQSYEDFAASL 60

Query: 61  PSDECRYAIYDFDFVTEENCQKSRIFFIGWSPDNSRVRSKMIYASSKDRFKRELDGFQVE 120
           P+DECRYAIYDFDFVT+ENCQKSRIFFI WSPDNSRVRSKMIYASSKDRFKRELDGFQVE
Sbjct: 61  PADECRYAIYDFDFVTKENCQKSRIFFIAWSPDNSRVRSKMIYASSKDRFKRELDGFQVE 120

Query: 121 LQATDPTEMGLDVIRSRVG 140
           LQATDPTEMGLDVIRSRVG
Sbjct: 121 LQATDPTEMGLDVIRSRVG 139

[Close]
BLAST of HG10020299 vs. NCBI nr
Match: KAG7017313.1 (Actin-depolymerizing factor 2, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 271.9 bits (694), Expect = 3.0e-69
Identity = 135/138 (97.83%), Postives = 137/138 (99.28%), Query Frame = 0 

Query: 2   ANAASGMAVNDDCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKVGEPTQSYEDFAASLP 61
           ANAASG+AVNDDCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKVGEPTQSYEDFAASLP
Sbjct: 66  ANAASGIAVNDDCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKVGEPTQSYEDFAASLP 125

Query: 62  SDECRYAIYDFDFVTEENCQKSRIFFIGWSPDNSRVRSKMIYASSKDRFKRELDGFQVEL 121
           +DECRYAIYDFDFVTEENCQKSRIFFI WSPDNSRVRSKMIYASSKDRFKRELDGFQVEL
Sbjct: 126 ADECRYAIYDFDFVTEENCQKSRIFFIAWSPDNSRVRSKMIYASSKDRFKRELDGFQVEL 185

Query: 122 QATDPTEMGLDVIRSRVG 140
           QATDPTEMGLDVIRSRVG
Sbjct: 186 QATDPTEMGLDVIRSRVG 203

[Close]
BLAST of HG10020299 vs. ExPASy Swiss-Prot
Match: Q9FVI1 (Actin-depolymerizing factor 2 OS=Petunia hybrida OX=4102 GN=ADF2 PE=2 SV=1)

HSP 1 Score: 248.8 bits (634), Expect = 3.5e-65
Identity = 120/139 (86.33%), Postives = 131/139 (94.24%), Query Frame = 0 

Query: 1   MANAASGMAVNDDCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKVGEPTQSYEDFAASL 60
           MANAASGMAV+DDCKLKFLELKAKRTYRFI++KIEEKQK+VVVEK+GEPT+SYEDF A L
Sbjct: 1   MANAASGMAVHDDCKLKFLELKAKRTYRFIIYKIEEKQKEVVVEKLGEPTESYEDFTAGL 60

Query: 61  PSDECRYAIYDFDFVTEENCQKSRIFFIGWSPDNSRVRSKMIYASSKDRFKRELDGFQVE 120
           P+DECRYA+YDFDF+T+EN QKSRIFFI WSPD +RVRSKMIYASSKDRFKRELDG QVE
Sbjct: 61  PADECRYAVYDFDFMTKENHQKSRIFFIAWSPDTARVRSKMIYASSKDRFKRELDGIQVE 120

Query: 121 LQATDPTEMGLDVIRSRVG 140
           LQATDPTEMGLDV RSR G
Sbjct: 121 LQATDPTEMGLDVFRSRAG 139

[Close]
BLAST of HG10020299 vs. ExPASy Swiss-Prot
Match: Q9FVI2 (Actin-depolymerizing factor 1 OS=Petunia hybrida OX=4102 GN=ADF1 PE=2 SV=1)

HSP 1 Score: 247.3 bits (630), Expect = 1.0e-64
Identity = 120/137 (87.59%), Postives = 130/137 (94.89%), Query Frame = 0 

Query: 1   MANAASGMAVNDDCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKVGEPTQSYEDFAASL 60
           MANAASGMAV+DDCKL+FLELKAKRT+RFIV+KIEEKQKQVVVEK+GEPT+SYEDFAASL
Sbjct: 1   MANAASGMAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVVVEKIGEPTESYEDFAASL 60

Query: 61  PSDECRYAIYDFDFVTEENCQKSRIFFIGWSPDNSRVRSKMIYASSKDRFKRELDGFQVE 120
           P +ECRYA+YDFDFVT ENCQKSRIFFI W PD +RVRSKMIYASSKDRFKRELDG QVE
Sbjct: 61  PENECRYAVYDFDFVTAENCQKSRIFFIAWCPDTARVRSKMIYASSKDRFKRELDGIQVE 120

Query: 121 LQATDPTEMGLDVIRSR 138
           LQA DPTEMGLDVI+SR
Sbjct: 121 LQACDPTEMGLDVIQSR 137

[Close]
BLAST of HG10020299 vs. ExPASy Swiss-Prot
Match: Q9ZSK3 (Actin-depolymerizing factor 4 OS=Arabidopsis thaliana OX=3702 GN=ADF4 PE=1 SV=2)

HSP 1 Score: 242.3 bits (617), Expect = 3.3e-63
Identity = 118/138 (85.51%), Postives = 130/138 (94.20%), Query Frame = 0 

Query: 1   MANAASGMAVNDDCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKVGEPTQSYEDFAASL 60
           MANAASGMAV+DDCKL+FLELKAKRT+RFIV+KIEEKQKQV+VEKVGEP  +YEDFAASL
Sbjct: 1   MANAASGMAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVIVEKVGEPILTYEDFAASL 60

Query: 61  PSDECRYAIYDFDFVTEENCQKSRIFFIGWSPDNSRVRSKMIYASSKDRFKRELDGFQVE 120
           P+DECRYAIYDFDFVT ENCQKS+IFFI W PD ++VRSKMIYASSKDRFKRELDG QVE
Sbjct: 61  PADECRYAIYDFDFVTAENCQKSKIFFIAWCPDVAKVRSKMIYASSKDRFKRELDGIQVE 120

Query: 121 LQATDPTEMGLDVIRSRV 139
           LQATDPTEM LDV++SRV
Sbjct: 121 LQATDPTEMDLDVLKSRV 138

[Close]
BLAST of HG10020299 vs. ExPASy Swiss-Prot
Match: Q0DLA3 (Actin-depolymerizing factor 7 OS=Oryza sativa subsp. japonica OX=39947 GN=ADF7 PE=3 SV=2)

HSP 1 Score: 241.5 bits (615), Expect = 5.6e-63
Identity = 116/137 (84.67%), Postives = 130/137 (94.89%), Query Frame = 0 

Query: 1   MANAASGMAVNDDCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKVGEPTQSYEDFAASL 60
           MANAASGMAV+D+CKLKFLELKAKRTYRFI++KI+EK+K VVVEKVGEP  +Y+DFAASL
Sbjct: 1   MANAASGMAVDDECKLKFLELKAKRTYRFIIYKIDEKKKMVVVEKVGEPVLNYDDFAASL 60

Query: 61  PSDECRYAIYDFDFVTEENCQKSRIFFIGWSPDNSRVRSKMIYASSKDRFKRELDGFQVE 120
           P++ECRYAI+D+DFVTEENCQKS+IFFI WSPD SRVRSKMIYASSKDRFKRELDG QVE
Sbjct: 61  PANECRYAIFDYDFVTEENCQKSKIFFIAWSPDTSRVRSKMIYASSKDRFKRELDGIQVE 120

Query: 121 LQATDPTEMGLDVIRSR 138
           LQATDPTE+GLDVIR R
Sbjct: 121 LQATDPTEVGLDVIRGR 137

[Close]
BLAST of HG10020299 vs. ExPASy Swiss-Prot
Match: Q39250 (Actin-depolymerizing factor 1 OS=Arabidopsis thaliana OX=3702 GN=ADF1 PE=1 SV=1)

HSP 1 Score: 239.6 bits (610), Expect = 2.1e-62
Identity = 117/137 (85.40%), Postives = 128/137 (93.43%), Query Frame = 0 

Query: 1   MANAASGMAVNDDCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKVGEPTQSYEDFAASL 60
           MANAASGMAV+DDCKL+FLELKAKRT+RFIV+KIEEKQKQVVVEKVG+P Q+YE+FAA L
Sbjct: 1   MANAASGMAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVVVEKVGQPIQTYEEFAACL 60

Query: 61  PSDECRYAIYDFDFVTEENCQKSRIFFIGWSPDNSRVRSKMIYASSKDRFKRELDGFQVE 120
           P+DECRYAIYDFDFVT ENCQKS+IFFI W PD ++VRSKMIYASSKDRFKRELDG QVE
Sbjct: 61  PADECRYAIYDFDFVTAENCQKSKIFFIAWCPDIAKVRSKMIYASSKDRFKRELDGIQVE 120

Query: 121 LQATDPTEMGLDVIRSR 138
           LQATDPTEM LDV RSR
Sbjct: 121 LQATDPTEMDLDVFRSR 137

[Close]
BLAST of HG10020299 vs. ExPASy TrEMBL
Match: A0A6J1F4F4 (actin-depolymerizing factor 2-like OS=Cucurbita moschata OX=3662 GN=LOC111442017 PE=3 SV=1)

HSP 1 Score: 273.9 bits (699), Expect = 3.8e-70
Identity = 136/139 (97.84%), Postives = 138/139 (99.28%), Query Frame = 0 

Query: 1   MANAASGMAVNDDCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKVGEPTQSYEDFAASL 60
           MANAASG+AVNDDCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKVGEPTQSYEDFAASL
Sbjct: 1   MANAASGIAVNDDCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKVGEPTQSYEDFAASL 60

Query: 61  PSDECRYAIYDFDFVTEENCQKSRIFFIGWSPDNSRVRSKMIYASSKDRFKRELDGFQVE 120
           P+DECRYAIYDFDFVTEENCQKSRIFFI WSPDNSRVRSKMIYASSKDRFKRELDGFQVE
Sbjct: 61  PADECRYAIYDFDFVTEENCQKSRIFFIAWSPDNSRVRSKMIYASSKDRFKRELDGFQVE 120

Query: 121 LQATDPTEMGLDVIRSRVG 140
           LQATDPTEMGLDVIRSRVG
Sbjct: 121 LQATDPTEMGLDVIRSRVG 139

[Close]
BLAST of HG10020299 vs. ExPASy TrEMBL
Match: A0A6J1L3B8 (actin-depolymerizing factor 2-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111498729 PE=3 SV=1)

HSP 1 Score: 272.3 bits (695), Expect = 1.1e-69
Identity = 135/139 (97.12%), Postives = 136/139 (97.84%), Query Frame = 0 

Query: 1   MANAASGMAVNDDCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKVGEPTQSYEDFAASL 60
           MANAASGMAVNDDCKLKFL LKAKRTYRFIVFKIEEKQKQVVVEKVGEPTQSYEDFAASL
Sbjct: 1   MANAASGMAVNDDCKLKFLALKAKRTYRFIVFKIEEKQKQVVVEKVGEPTQSYEDFAASL 60

Query: 61  PSDECRYAIYDFDFVTEENCQKSRIFFIGWSPDNSRVRSKMIYASSKDRFKRELDGFQVE 120
           PSDECRYA+YDFDFVTEENCQKSRIFFI WSPDNSRVRSKMIYASSKDRFKRELDGFQVE
Sbjct: 61  PSDECRYAVYDFDFVTEENCQKSRIFFIAWSPDNSRVRSKMIYASSKDRFKRELDGFQVE 120

Query: 121 LQATDPTEMGLDVIRSRVG 140
           LQATDPTEMGLDVIRSR G
Sbjct: 121 LQATDPTEMGLDVIRSRAG 139

[Close]
BLAST of HG10020299 vs. ExPASy TrEMBL
Match: A0A6J1J833 (actin-depolymerizing factor 2-like OS=Cucurbita maxima OX=3661 GN=LOC111482130 PE=3 SV=1)

HSP 1 Score: 272.3 bits (695), Expect = 1.1e-69
Identity = 135/139 (97.12%), Postives = 138/139 (99.28%), Query Frame = 0 

Query: 1   MANAASGMAVNDDCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKVGEPTQSYEDFAASL 60
           MANAASG+AVNDDCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKVGEPTQSYEDFAASL
Sbjct: 1   MANAASGIAVNDDCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKVGEPTQSYEDFAASL 60

Query: 61  PSDECRYAIYDFDFVTEENCQKSRIFFIGWSPDNSRVRSKMIYASSKDRFKRELDGFQVE 120
           P+DECRYAIYDFDFVT+ENCQKSRIFFI WSPDNSRVRSKMIYASSKDRFKRELDGFQVE
Sbjct: 61  PADECRYAIYDFDFVTKENCQKSRIFFIAWSPDNSRVRSKMIYASSKDRFKRELDGFQVE 120

Query: 121 LQATDPTEMGLDVIRSRVG 140
           LQATDPTEMGLDVIRSRVG
Sbjct: 121 LQATDPTEMGLDVIRSRVG 139

[Close]
BLAST of HG10020299 vs. ExPASy TrEMBL
Match: A0A6J1G2E2 (actin-depolymerizing factor 2-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111450067 PE=3 SV=1)

HSP 1 Score: 272.3 bits (695), Expect = 1.1e-69
Identity = 135/139 (97.12%), Postives = 136/139 (97.84%), Query Frame = 0 

Query: 1   MANAASGMAVNDDCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKVGEPTQSYEDFAASL 60
           MANAASGMAVNDDCKLKFL LKAKRTYRFIVFKIEEKQKQVVVEKVGEPTQSYEDFAASL
Sbjct: 1   MANAASGMAVNDDCKLKFLALKAKRTYRFIVFKIEEKQKQVVVEKVGEPTQSYEDFAASL 60

Query: 61  PSDECRYAIYDFDFVTEENCQKSRIFFIGWSPDNSRVRSKMIYASSKDRFKRELDGFQVE 120
           PSDECRYA+YDFDFVTEENCQKSRIFFI WSPDNSRVRSKMIYASSKDRFKRELDGFQVE
Sbjct: 61  PSDECRYAVYDFDFVTEENCQKSRIFFIAWSPDNSRVRSKMIYASSKDRFKRELDGFQVE 120

Query: 121 LQATDPTEMGLDVIRSRVG 140
           LQATDPTEMGLDVIRSR G
Sbjct: 121 LQATDPTEMGLDVIRSRAG 139

[Close]
BLAST of HG10020299 vs. ExPASy TrEMBL
Match: A0A1S3B603 (actin-depolymerizing factor 2-like OS=Cucumis melo OX=3656 GN=LOC103486402 PE=3 SV=1)

HSP 1 Score: 270.8 bits (691), Expect = 3.2e-69
Identity = 135/139 (97.12%), Postives = 137/139 (98.56%), Query Frame = 0 

Query: 1   MANAASGMAVNDDCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKVGEPTQSYEDFAASL 60
           MANAASGMAV+DDCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKVGEPTQSYEDFA SL
Sbjct: 1   MANAASGMAVDDDCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKVGEPTQSYEDFAKSL 60

Query: 61  PSDECRYAIYDFDFVTEENCQKSRIFFIGWSPDNSRVRSKMIYASSKDRFKRELDGFQVE 120
           PSDECRYAIYDFDFVTEENCQKSRIFFI WSPD+SRVRSKMIYASSKDRFKRELDGFQVE
Sbjct: 61  PSDECRYAIYDFDFVTEENCQKSRIFFIAWSPDSSRVRSKMIYASSKDRFKRELDGFQVE 120

Query: 121 LQATDPTEMGLDVIRSRVG 140
           LQATDPTEMGLDVIRSRVG
Sbjct: 121 LQATDPTEMGLDVIRSRVG 139

[Close]
BLAST of HG10020299 vs. TAIR 10
Match: AT5G59890.1 (actin depolymerizing factor 4 )

HSP 1 Score: 242.3 bits (617), Expect = 2.4e-64
Identity = 118/138 (85.51%), Postives = 130/138 (94.20%), Query Frame = 0 

Query: 1   MANAASGMAVNDDCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKVGEPTQSYEDFAASL 60
           MANAASGMAV+DDCKL+FLELKAKRT+RFIV+KIEEKQKQV+VEKVGEP  +YEDFAASL
Sbjct: 1   MANAASGMAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVIVEKVGEPILTYEDFAASL 60

Query: 61  PSDECRYAIYDFDFVTEENCQKSRIFFIGWSPDNSRVRSKMIYASSKDRFKRELDGFQVE 120
           P+DECRYAIYDFDFVT ENCQKS+IFFI W PD ++VRSKMIYASSKDRFKRELDG QVE
Sbjct: 61  PADECRYAIYDFDFVTAENCQKSKIFFIAWCPDVAKVRSKMIYASSKDRFKRELDGIQVE 120

Query: 121 LQATDPTEMGLDVIRSRV 139
           LQATDPTEM LDV++SRV
Sbjct: 121 LQATDPTEMDLDVLKSRV 138

[Close]
BLAST of HG10020299 vs. TAIR 10
Match: AT3G46010.1 (actin depolymerizing factor 1 )

HSP 1 Score: 239.6 bits (610), Expect = 1.5e-63
Identity = 117/137 (85.40%), Postives = 128/137 (93.43%), Query Frame = 0 

Query: 1   MANAASGMAVNDDCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKVGEPTQSYEDFAASL 60
           MANAASGMAV+DDCKL+FLELKAKRT+RFIV+KIEEKQKQVVVEKVG+P Q+YE+FAA L
Sbjct: 1   MANAASGMAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVVVEKVGQPIQTYEEFAACL 60

Query: 61  PSDECRYAIYDFDFVTEENCQKSRIFFIGWSPDNSRVRSKMIYASSKDRFKRELDGFQVE 120
           P+DECRYAIYDFDFVT ENCQKS+IFFI W PD ++VRSKMIYASSKDRFKRELDG QVE
Sbjct: 61  PADECRYAIYDFDFVTAENCQKSKIFFIAWCPDIAKVRSKMIYASSKDRFKRELDGIQVE 120

Query: 121 LQATDPTEMGLDVIRSR 138
           LQATDPTEM LDV RSR
Sbjct: 121 LQATDPTEMDLDVFRSR 137

[Close]
BLAST of HG10020299 vs. TAIR 10
Match: AT3G46010.2 (actin depolymerizing factor 1 )

HSP 1 Score: 237.7 bits (605), Expect = 5.8e-63
Identity = 116/136 (85.29%), Postives = 127/136 (93.38%), Query Frame = 0 

Query: 2   ANAASGMAVNDDCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKVGEPTQSYEDFAASLP 61
           ANAASGMAV+DDCKL+FLELKAKRT+RFIV+KIEEKQKQVVVEKVG+P Q+YE+FAA LP
Sbjct: 13  ANAASGMAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVVVEKVGQPIQTYEEFAACLP 72

Query: 62  SDECRYAIYDFDFVTEENCQKSRIFFIGWSPDNSRVRSKMIYASSKDRFKRELDGFQVEL 121
           +DECRYAIYDFDFVT ENCQKS+IFFI W PD ++VRSKMIYASSKDRFKRELDG QVEL
Sbjct: 73  ADECRYAIYDFDFVTAENCQKSKIFFIAWCPDIAKVRSKMIYASSKDRFKRELDGIQVEL 132

Query: 122 QATDPTEMGLDVIRSR 138
           QATDPTEM LDV RSR
Sbjct: 133 QATDPTEMDLDVFRSR 148

[Close]
BLAST of HG10020299 vs. TAIR 10
Match: AT3G46000.1 (actin depolymerizing factor 2 )

HSP 1 Score: 231.1 bits (588), Expect = 5.4e-61
Identity = 112/137 (81.75%), Postives = 126/137 (91.97%), Query Frame = 0 

Query: 1   MANAASGMAVNDDCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKVGEPTQSYEDFAASL 60
           MANAASGMAV+DDCKLKF+ELKAKRT+R IV+KIE+  KQV+VEK+GEP QSY+DFAASL
Sbjct: 1   MANAASGMAVHDDCKLKFMELKAKRTFRTIVYKIED--KQVIVEKLGEPEQSYDDFAASL 60

Query: 61  PSDECRYAIYDFDFVTEENCQKSRIFFIGWSPDNSRVRSKMIYASSKDRFKRELDGFQVE 120
           P+D+CRY IYDFDFVT ENCQKS+IFFI WSPD ++VR KMIYASSKDRFKRELDG QVE
Sbjct: 61  PADDCRYCIYDFDFVTAENCQKSKIFFIAWSPDTAKVRDKMIYASSKDRFKRELDGIQVE 120

Query: 121 LQATDPTEMGLDVIRSR 138
           LQATDPTEMGLDV +SR
Sbjct: 121 LQATDPTEMGLDVFKSR 135

[Close]
BLAST of HG10020299 vs. TAIR 10
Match: AT5G59890.2 (actin depolymerizing factor 4 )

HSP 1 Score: 229.6 bits (584), Expect = 1.6e-60
Identity = 111/131 (84.73%), Postives = 123/131 (93.89%), Query Frame = 0 

Query: 8   MAVNDDCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKVGEPTQSYEDFAASLPSDECRY 67
           MAV+DDCKL+FLELKAKRT+RFIV+KIEEKQKQV+VEKVGEP  +YEDFAASLP+DECRY
Sbjct: 1   MAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVIVEKVGEPILTYEDFAASLPADECRY 60

Query: 68  AIYDFDFVTEENCQKSRIFFIGWSPDNSRVRSKMIYASSKDRFKRELDGFQVELQATDPT 127
           AIYDFDFVT ENCQKS+IFFI W PD ++VRSKMIYASSKDRFKRELDG QVELQATDPT
Sbjct: 61  AIYDFDFVTAENCQKSKIFFIAWCPDVAKVRSKMIYASSKDRFKRELDGIQVELQATDPT 120

Query: 128 EMGLDVIRSRV 139
           EM LDV++SRV
Sbjct: 121 EMDLDVLKSRV 131

The following BLAST results are available for this feature:
BLAST of HG10020299 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038905295.11.2e-7099.28actin-depolymerizing factor 2-like [Benincasa hispida] >XP_038905296.1 actin-dep... [more]
XP_022935027.17.8e-7097.84actin-depolymerizing factor 2-like [Cucurbita moschata] >XP_023528602.1 actin-de... [more]
XP_022945981.12.3e-6997.12actin-depolymerizing factor 2-like isoform X2 [Cucurbita moschata] >XP_022971271... [more]
XP_022983563.12.3e-6997.12actin-depolymerizing factor 2-like [Cucurbita maxima][more]
KAG7017313.13.0e-6997.83Actin-depolymerizing factor 2, partial [Cucurbita argyrosperma subsp. argyrosper... [more]
BLAST of HG10020299 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9FVI13.5e-6586.33Actin-depolymerizing factor 2 OS=Petunia hybrida OX=4102 GN=ADF2 PE=2 SV=1[more]
Q9FVI21.0e-6487.59Actin-depolymerizing factor 1 OS=Petunia hybrida OX=4102 GN=ADF1 PE=2 SV=1[more]
Q9ZSK33.3e-6385.51Actin-depolymerizing factor 4 OS=Arabidopsis thaliana OX=3702 GN=ADF4 PE=1 SV=2[more]
Q0DLA35.6e-6384.67Actin-depolymerizing factor 7 OS=Oryza sativa subsp. japonica OX=39947 GN=ADF7 P... [more]
Q392502.1e-6285.40Actin-depolymerizing factor 1 OS=Arabidopsis thaliana OX=3702 GN=ADF1 PE=1 SV=1[more]
BLAST of HG10020299 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1F4F43.8e-7097.84actin-depolymerizing factor 2-like OS=Cucurbita moschata OX=3662 GN=LOC111442017... [more]
A0A6J1L3B81.1e-6997.12actin-depolymerizing factor 2-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC... [more]
A0A6J1J8331.1e-6997.12actin-depolymerizing factor 2-like OS=Cucurbita maxima OX=3661 GN=LOC111482130 P... [more]
A0A6J1G2E21.1e-6997.12actin-depolymerizing factor 2-like isoform X2 OS=Cucurbita moschata OX=3662 GN=L... [more]
A0A1S3B6033.2e-6997.12actin-depolymerizing factor 2-like OS=Cucumis melo OX=3656 GN=LOC103486402 PE=3 ... [more]
BLAST of HG10020299 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G59890.12.4e-6485.51actin depolymerizing factor 4 [more]
AT3G46010.11.5e-6385.40actin depolymerizing factor 1 [more]
AT3G46010.25.8e-6385.29actin depolymerizing factor 1 [more]
AT3G46000.15.4e-6181.75actin depolymerizing factor 2 [more]
AT5G59890.21.6e-6084.73actin depolymerizing factor 4 [more]
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002108Actin-depolymerising factor homology domainSMARTSM00102adf_2coord: 12..139
e-value: 1.4E-59
score: 213.9
IPR002108Actin-depolymerising factor homology domainPFAMPF00241Cofilin_ADFcoord: 14..136
e-value: 4.8E-37
score: 126.5
IPR002108Actin-depolymerising factor homology domainPROSITEPS51263ADF_Hcoord: 7..139
score: 39.79863
IPR029006ADF-H/Gelsolin-like domain superfamilyGENE3D3.40.20.10Severincoord: 1..139
e-value: 1.1E-52
score: 180.1
NoneNo IPR availablePANTHERPTHR11913:SF74ACTIN-DEPOLYMERIZING FACTOR 2-LIKEcoord: 1..137
NoneNo IPR availableSUPERFAMILY55753Actin depolymerizing proteinscoord: 3..138
IPR017904ADF/CofilinPANTHERPTHR11913COFILIN-RELATEDcoord: 1..137
IPR017904ADF/CofilinCDDcd11286ADF_cofilin_likecoord: 6..138
e-value: 2.52245E-65
score: 193.157

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
HG10020299.1HG10020299.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0030042 actin filament depolymerization
cellular_component GO:0015629 actin cytoskeleton
cellular_component GO:0005737 cytoplasm
molecular_function GO:0051015 actin filament binding
molecular_function GO:0003779 actin binding