HG10020260 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10020260
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	Ribonuclease P protein subunit p29
Location	Chr04: 30318314 .. 30321594 (+)
RNA-Seq Expression	HG10020260
Synteny	HG10020260

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGACAATAAAGCTCCTCAAGATCTAAGGAAACACGCATTGGAGGCATTGGAGCGGAGGTGTGCTGCTGCTAAAGTCGAACTTCTTCAACAACAGAAGAAGATTAGTTCTACAGAGAAATTGAAGAAAGAAGTCAAGGGAAAATCAACTTTGAACGATTCCACTTCAGTTTCAAGAAATCAGTATGATTCTTCAATTCTTTTGCCCTCTGAAGGGAAACCCCCAAATAAAGGTCCCCTCATTGTACATATGGTTTTTAATATTTTCGTTTGGTGGGGAAGGCAGTTTGTTTCTAGTTTGCTTATGGTTAGTTAATTTCTTTCATATGCAGATATGAATGAAAGTGATCCTATATATTTCACCCTCTCAGCTGCTGTAAATGAAAAATTGATGGCTACAAGTATGGATGTAAGTTGTCCTCACTGGAAACTTTGAAGGGCCTTTTACCATTTAGTGTTTGGTTTTATGTATTTTGAAAATTAAGTTTATAAATGCTACTTCATCCACGTCTTTCTTTGTTTGCTACCAGCTTTTCAAAAGCAATTTCAATATCTAAGCCAAAGTTTGAAAACTAAAAAGAGTAATTTTTAAAATTTTGTTTTTGAGATTTAGTTAAGAACTTAAATGTGGTCTTAAAAAGAGATGAAAAACATACCCAAAAAATTGAGAGGAGATGAGCGTAATCTTAAAGACATCTAATAAGGAAATCGTTGTCAAATGGGATTTAATAAACTCGTATGAGTTGGCTTTGGGTGGTGAAGTCTCCAAAAAGTAGTGTTGTGGACCATAGGCACAATGTTAAGTACGGGGTCTCATATACCTAGTTACAGGAAAAAGAACTATATGAAGTGCGTACTTGGTTAATTTTAATCTCACCTCTTCTGCAGGTTTCAAATAATAGAGGAAGAGTGGTTGACAAGATTTGCCACGAGCTAAGAACTAGTGGTTACATTAAGCGGTCAAGAGAATTGAAAGTTGATGCTTGTATCCTTCTCGACAACTTTGTTCCAAAACATGCTGGAATGATTGGCTCTCGAATGAGAGCTTTGCGGAGCAATTCAAAACGATCTAAAAGGCATATGTCCATGAAGCAACATAAAAAGTGTGGAACATTTGATCTGCCTTCTGATTTCCACAAGTGAGTTCCATTTATCTCCTTGGTTGAGAGCTCTCATCACCAGCTTCTCACCCCATTTTATCCCATATAGGATTGAATTGGAAAATGATCACGAATGTGTCTGTTTATCATGAAATTAGAATTAGAACTTAGTAGTTGATTGATATCCATCAAAAAAGGAATTCGGAAGGTTATTGAGTTAAGTCATGTTTATTGCACTCTATTTGTTATGCATGTTTTGGATAAACTGCCATTGCAATGAGTTTTCTTTTGGCGGTCATTTATCTTTAACAATGAATTATTGTGTGTGCACGCACGTGTGTGTGTTTTTAATAATGATTAAAAAAAAGTTCCTCATAGGACTGAATATGAAAATGATGATGAATGTATCTGTTTCTCCTGAAATTAGAATTAGAATCTCAATTTAGTTGTTGATCCTTATCCATCGAAAGGGGAATTAAGAAGGTGTTATTGGTCAAAGTCAAAGACGTGTTATTGCACTCTTTAGAGTTTTAAGTTTGTTCTTCATAAGCAGACATTGAAATGGGTTTTCTTTGGCTGTCACTATCATTTATTTGAATTATTATGCTTTTCTATTTCAGGTTTGAAATCTTTTGGCCAATGCATGATATGTGGAAAAACTACATGAAACAACGGCTGCACCATGTTGGGTTAGTTTTTTACTACTGTTTCCTATTCTGTAATTTTTCTTCTCTCAAATCTTATCTGTTACTTTTCACCCTTATTTTGGCCCCTTTTTGTTATAATTAATGTTCTTCCTGTAGTAGTGGTATGTTATCTGTTTCATTGGGTGATCAGAGTTTCAAATCCTGCAGGCCAGATGCGTTAGCTCGAAATCTTCTCATTGCAGATCTTCATGGTGCCATGATCCGAGGTAAAATCATTATTTTCTCCCATCTAAATTTTTGCATTAATATCATATTTATAGAATCTTCTTTTTCATCGAATAAACCACATTTCAAACGATGGAAGAAAGCACAAAAAACATGGCCCAACCAACATGAAGTTTACAGAAAGAATGGATGATTTTTCCCCACTCCATGATTTATGTGTATTCCAATGAAAATCCAGCCCCTATTAACCTTAAGTTTCCAAATATCCAAGTGGCACGATTGGTTTCTTATACTTGGTTGGGAGAATGGAAGAATGGAAATTTCAGTGACCTACAACACCTTTTATATATATATATATATATATATATAATTTTTTTTAAAGAAAGTATTGCATTGATTGAATAAAATGATTCAAAATGATATAAAATGAGGTCTCGACTCCCAATCATAGAGAGAGACTACAAAAGATTTGTCTTTAAATCCTTAGGACATGTTTGGCATAAGGAGTAGGAGTTGAGAGACGTGGAGTTGTTAACTCCATCCTTTGTTTGTCCCAAGGACAAGGAGCTCTTAAACCCACTATAGGCTCCCACGATTAAAAAACATCAATTACATGACTTATTAGCTCTTTACAACTCTTCAGACTAAACAACTCTACTCCTTATCCCATACGCTCCTAAAAGGCTTCATATATTTACACCAGTAAAAAGCATTGAGAAATTCTCAAATTTCTTTCCTCTCATATCTTCCACATAACCGCCCTTATGGTGTTCGTCCACAAGACATTCATGTGAACCTAGGGGGGGGCACTATGCACAATTCATAGCACCCTCAAGTTATTTTAAGGAAATCAATGTTGAAATCTTAGTTCAAGTCAATAAGAGCATGAGGCTTTATACTAGTGTTTTCTCTCCTATTAACTATTTTATCATTTGATACCACTGCAGTTGTTGAGTGTAAAATACCCGCTTTTACTGGAATAAGCGGCATCATGATACGAGAAACTGCAGAAACGTTTGGAATTGTGACAAAAGATGATAAGTTTCGAGGTAACTCGTCAATTTGAATCTTAAATCTGTTACATTTTCCATGATCAAAACCGATTTGCTTGTGTGAATCAAAGAAGTTCCATGAATTTGGGCAAGTTTTTCTAACAAATGACCATGGACATTTCTGTTTGGTGGTTTTGATTCGCAGTCGTGCCAAAGAAGTCTTCTGTGTTTATTTTCCAATGGGATTGCTGGAAAGTTACATTGCTGGGAGATAAGCTCAGTTCAAGAATTCCAAGTTTGCCATCTTCTAATTGA

mRNA sequence

ATGGCGGACAATAAAGCTCCTCAAGATCTAAGGAAACACGCATTGGAGGCATTGGAGCGGAGGTGTGCTGCTGCTAAAGTCGAACTTCTTCAACAACAGAAGAAGATTAGTTCTACAGAGAAATTGAAGAAAGAAGTCAAGGGAAAATCAACTTTGAACGATTCCACTTCAGTTTCAAGAAATCAGTATGATTCTTCAATTCTTTTGCCCTCTGAAGGGAAACCCCCAAATAAAGATATGAATGAAAGTGATCCTATATATTTCACCCTCTCAGCTGCTGTAAATGAAAAATTGATGGCTACAAGTATGGATGTTTCAAATAATAGAGGAAGAGTGGTTGACAAGATTTGCCACGAGCTAAGAACTAGTGGTTACATTAAGCGGTCAAGAGAATTGAAAGTTGATGCTTGTATCCTTCTCGACAACTTTGTTCCAAAACATGCTGGAATGATTGGCTCTCGAATGAGAGCTTTGCGGAGCAATTCAAAACGATCTAAAAGGCATATGTCCATGAAGCAACATAAAAAGTGTGGAACATTTGATCTGCCTTCTGATTTCCACAAGTTTGAAATCTTTTGGCCAATGCATGATATGTGGAAAAACTACATGAAACAACGGCTGCACCATGTTGGTAGTGGTATGTTATCTGTTTCATTGGGTGATCAGAGTTTCAAATCCTGCAGGCCAGATGCGTTAGCTCGAAATCTTCTCATTGCAGATCTTCATGGTGCCATGATCCGAGTTGTTGAGTGTAAAATACCCGCTTTTACTGGAATAAGCGGCATCATGATACGAGAAACTGCAGAAACGTTTGGAATTGTGACAAAAGATGATAAGTTTCGAGTCGTGCCAAAGAAGTCTTCTGTGTTTATTTTCCAATGGGATTGCTGGAAAGTTACATTGCTGGGAGATAAGCTCAGTTCAAGAATTCCAAGTTTGCCATCTTCTAATTGA

Coding sequence (CDS)

ATGGCGGACAATAAAGCTCCTCAAGATCTAAGGAAACACGCATTGGAGGCATTGGAGCGGAGGTGTGCTGCTGCTAAAGTCGAACTTCTTCAACAACAGAAGAAGATTAGTTCTACAGAGAAATTGAAGAAAGAAGTCAAGGGAAAATCAACTTTGAACGATTCCACTTCAGTTTCAAGAAATCAGTATGATTCTTCAATTCTTTTGCCCTCTGAAGGGAAACCCCCAAATAAAGATATGAATGAAAGTGATCCTATATATTTCACCCTCTCAGCTGCTGTAAATGAAAAATTGATGGCTACAAGTATGGATGTTTCAAATAATAGAGGAAGAGTGGTTGACAAGATTTGCCACGAGCTAAGAACTAGTGGTTACATTAAGCGGTCAAGAGAATTGAAAGTTGATGCTTGTATCCTTCTCGACAACTTTGTTCCAAAACATGCTGGAATGATTGGCTCTCGAATGAGAGCTTTGCGGAGCAATTCAAAACGATCTAAAAGGCATATGTCCATGAAGCAACATAAAAAGTGTGGAACATTTGATCTGCCTTCTGATTTCCACAAGTTTGAAATCTTTTGGCCAATGCATGATATGTGGAAAAACTACATGAAACAACGGCTGCACCATGTTGGTAGTGGTATGTTATCTGTTTCATTGGGTGATCAGAGTTTCAAATCCTGCAGGCCAGATGCGTTAGCTCGAAATCTTCTCATTGCAGATCTTCATGGTGCCATGATCCGAGTTGTTGAGTGTAAAATACCCGCTTTTACTGGAATAAGCGGCATCATGATACGAGAAACTGCAGAAACGTTTGGAATTGTGACAAAAGATGATAAGTTTCGAGTCGTGCCAAAGAAGTCTTCTGTGTTTATTTTCCAATGGGATTGCTGGAAAGTTACATTGCTGGGAGATAAGCTCAGTTCAAGAATTCCAAGTTTGCCATCTTCTAATTGA

Protein sequence

MADNKAPQDLRKHALEALERRCAAAKVELLQQQKKISSTEKLKKEVKGKSTLNDSTSVSRNQYDSSILLPSEGKPPNKDMNESDPIYFTLSAAVNEKLMATSMDVSNNRGRVVDKICHELRTSGYIKRSRELKVDACILLDNFVPKHAGMIGSRMRALRSNSKRSKRHMSMKQHKKCGTFDLPSDFHKFEIFWPMHDMWKNYMKQRLHHVGSGMLSVSLGDQSFKSCRPDALARNLLIADLHGAMIRVVECKIPAFTGISGIMIRETAETFGIVTKDDKFRVVPKKSSVFIFQWDCWKVTLLGDKLSSRIPSLPSSN

Homology

[Close]

BLAST of HG10020260 vs. NCBI nr
Match: XP_038906073.1 (uncharacterized protein LOC120091963 isoform X1 [Benincasa hispida] >XP_038906074.1 uncharacterized protein LOC120091963 isoform X1 [Benincasa hispida] >XP_038906075.1 uncharacterized protein LOC120091963 isoform X1 [Benincasa hispida] >XP_038906077.1 uncharacterized protein LOC120091963 isoform X1 [Benincasa hispida])

HSP 1 Score: 590.5 bits (1521), Expect = 8.6e-165
Identity = 300/318 (94.34%), Postives = 309/318 (97.17%), Query Frame = 0


Query: 1   MADNKAPQDLRKHALEALERRCAAAKVELLQQQKKISSTEKLKKEVKGKSTLNDSTS-VS 60
           MADNKA QDLRKHALEALERRCAAAKVELLQQQKKISSTEKLKKEVKGKSTLNDS S VS
Sbjct: 1   MADNKASQDLRKHALEALERRCAAAKVELLQQQKKISSTEKLKKEVKGKSTLNDSISVVS 60

Query: 61  RNQYDSSILLPSEGKPPNKDMNESDPIYFTLSAAVNEKLMATSMDVSNNRGRVVDKICHE 120
           RNQYDSSILLPSEGKPP+KD+NESDPIYFTLSAAVNEKLMAT+MDVSNNRGRVVD+ICHE
Sbjct: 61  RNQYDSSILLPSEGKPPSKDVNESDPIYFTLSAAVNEKLMATTMDVSNNRGRVVDRICHE 120

Query: 121 LRTSGYIKRSRELKVDACILLDNFVPKHAGMIGSRMRALRSNSKRSKRHMSMKQHKKCGT 180
           LRTSGYIKRS+E KVDACILLDNFVPK AGMIGSR RALRSNSKRSKRHMSM+QHKKCGT
Sbjct: 121 LRTSGYIKRSKEFKVDACILLDNFVPKRAGMIGSRKRALRSNSKRSKRHMSMRQHKKCGT 180

Query: 181 FDLPSDFHKFEIFWPMHDMWKNYMKQRLHHVGSGMLSVSLGDQSFKSCRPDALARNLLIA 240
           FDLPSDFHKFEIFWPMHDMWK+YMKQRLHHVG G+ SVSLGDQSFKSCRPDALARNLLIA
Sbjct: 181 FDLPSDFHKFEIFWPMHDMWKSYMKQRLHHVG-GLSSVSLGDQSFKSCRPDALARNLLIA 240

Query: 241 DLHGAMIRVVECKIPAFTGISGIMIRETAETFGIVTKDDKFRVVPKKSSVFIFQWDCWKV 300
           DLHGAMIRVVEC+IPAFTG SGIMIRETAETFGIVTKDDKFRVVPKKSSVFIFQWDCWKV
Sbjct: 241 DLHGAMIRVVECQIPAFTGTSGIMIRETAETFGIVTKDDKFRVVPKKSSVFIFQWDCWKV 300

Query: 301 TLLGDKLSSRIPSLPSSN 318
           TLLGDKLSSRIPSLPSSN
Sbjct: 301 TLLGDKLSSRIPSLPSSN 317

[Close]

BLAST of HG10020260 vs. NCBI nr
Match: XP_038906078.1 (uncharacterized protein LOC120091963 isoform X2 [Benincasa hispida])

HSP 1 Score: 583.2 bits (1502), Expect = 1.4e-162
Identity = 299/318 (94.03%), Postives = 307/318 (96.54%), Query Frame = 0


Query: 1   MADNKAPQDLRKHALEALERRCAAAKVELLQQQKKISSTEKLKKEVKGKSTLNDSTS-VS 60
           MADNKA QDLRKHALEALERRCAAAKVELLQQQKKISSTEKLKKEVKGKSTLNDS S VS
Sbjct: 1   MADNKASQDLRKHALEALERRCAAAKVELLQQQKKISSTEKLKKEVKGKSTLNDSISVVS 60

Query: 61  RNQYDSSILLPSEGKPPNKDMNESDPIYFTLSAAVNEKLMATSMDVSNNRGRVVDKICHE 120
           RNQYDSSILLPSEGKPPN  +NESDPIYFTLSAAVNEKLMAT+MDVSNNRGRVVD+ICHE
Sbjct: 61  RNQYDSSILLPSEGKPPN--VNESDPIYFTLSAAVNEKLMATTMDVSNNRGRVVDRICHE 120

Query: 121 LRTSGYIKRSRELKVDACILLDNFVPKHAGMIGSRMRALRSNSKRSKRHMSMKQHKKCGT 180
           LRTSGYIKRS+E KVDACILLDNFVPK AGMIGSR RALRSNSKRSKRHMSM+QHKKCGT
Sbjct: 121 LRTSGYIKRSKEFKVDACILLDNFVPKRAGMIGSRKRALRSNSKRSKRHMSMRQHKKCGT 180

Query: 181 FDLPSDFHKFEIFWPMHDMWKNYMKQRLHHVGSGMLSVSLGDQSFKSCRPDALARNLLIA 240
           FDLPSDFHKFEIFWPMHDMWK+YMKQRLHHVG G+ SVSLGDQSFKSCRPDALARNLLIA
Sbjct: 181 FDLPSDFHKFEIFWPMHDMWKSYMKQRLHHVG-GLSSVSLGDQSFKSCRPDALARNLLIA 240

Query: 241 DLHGAMIRVVECKIPAFTGISGIMIRETAETFGIVTKDDKFRVVPKKSSVFIFQWDCWKV 300
           DLHGAMIRVVEC+IPAFTG SGIMIRETAETFGIVTKDDKFRVVPKKSSVFIFQWDCWKV
Sbjct: 241 DLHGAMIRVVECQIPAFTGTSGIMIRETAETFGIVTKDDKFRVVPKKSSVFIFQWDCWKV 300

Query: 301 TLLGDKLSSRIPSLPSSN 318
           TLLGDKLSSRIPSLPSSN
Sbjct: 301 TLLGDKLSSRIPSLPSSN 315

[Close]

BLAST of HG10020260 vs. NCBI nr
Match: XP_038906079.1 (ribonuclease P protein subunit p29 isoform X3 [Benincasa hispida])

HSP 1 Score: 555.8 bits (1431), Expect = 2.4e-154
Identity = 286/318 (89.94%), Postives = 294/318 (92.45%), Query Frame = 0


Query: 1   MADNKAPQDLRKHALEALERRCAAAKVELLQQQKKISSTEKLKKEVKGKSTLNDSTS-VS 60
           MADNKA QDLRKHALEALERRCAAAKVELLQQQKKISSTEKLKKEVKGKSTLNDS S VS
Sbjct: 1   MADNKASQDLRKHALEALERRCAAAKVELLQQQKKISSTEKLKKEVKGKSTLNDSISVVS 60

Query: 61  RNQYDSSILLPSEGKPPNKDMNESDPIYFTLSAAVNEKLMATSMDVSNNRGRVVDKICHE 120
           RNQYDSSILLPSEGKPP+KD+NESDPIYFTLSAAVNEKLMAT+MDVSNNRGRVVD+ICHE
Sbjct: 61  RNQYDSSILLPSEGKPPSKDVNESDPIYFTLSAAVNEKLMATTMDVSNNRGRVVDRICHE 120

Query: 121 LRTSGYIKRSRELKVDACILLDNFVPKHAGMIGSRMRALRSNSKRSKRHMSMKQHKKCGT 180
           LRTSGYIKRS+E KVDACILLDNFVPK AGMIGSR RALRSNSKRSKRHMSM+QHKKCGT
Sbjct: 121 LRTSGYIKRSKEFKVDACILLDNFVPKRAGMIGSRKRALRSNSKRSKRHMSMRQHKKCGT 180

Query: 181 FDLPSDFHKFEIFWPMHDMWKNYMKQRLHHVGSGMLSVSLGDQSFKSCRPDALARNLLIA 240
           FDLPSDFHKFEIFWPMHDMWK+YMKQRLHHVG                 PDALARNLLIA
Sbjct: 181 FDLPSDFHKFEIFWPMHDMWKSYMKQRLHHVG-----------------PDALARNLLIA 240

Query: 241 DLHGAMIRVVECKIPAFTGISGIMIRETAETFGIVTKDDKFRVVPKKSSVFIFQWDCWKV 300
           DLHGAMIRVVEC+IPAFTG SGIMIRETAETFGIVTKDDKFRVVPKKSSVFIFQWDCWKV
Sbjct: 241 DLHGAMIRVVECQIPAFTGTSGIMIRETAETFGIVTKDDKFRVVPKKSSVFIFQWDCWKV 300

Query: 301 TLLGDKLSSRIPSLPSSN 318
           TLLGDKLSSRIPSLPSSN
Sbjct: 301 TLLGDKLSSRIPSLPSSN 301

[Close]

BLAST of HG10020260 vs. NCBI nr
Match: XP_008442653.1 (PREDICTED: uncharacterized protein LOC103486457 isoform X2 [Cucumis melo] >XP_008442654.1 PREDICTED: uncharacterized protein LOC103486457 isoform X2 [Cucumis melo] >XP_008442655.1 PREDICTED: uncharacterized protein LOC103486457 isoform X2 [Cucumis melo] >XP_008442656.1 PREDICTED: uncharacterized protein LOC103486457 isoform X2 [Cucumis melo] >KAA0044031.1 ribonuclease P protein subunit p29 isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 524.6 bits (1350), Expect = 5.8e-145
Identity = 274/318 (86.16%), Postives = 286/318 (89.94%), Query Frame = 0


Query: 1   MADNKAPQDLRKHALEALERRCAAAKVELLQQQKKISSTEKLKKEVKGKSTLNDSTS-VS 60
           M+D KA QDLRKHALEALERRCAAAKVELLQQQ KISSTEK KKEVKGKS+LND TS VS
Sbjct: 1   MSDKKASQDLRKHALEALERRCAAAKVELLQQQ-KISSTEKSKKEVKGKSSLNDPTSVVS 60

Query: 61  RNQYDSSILLPSEGKPPNKDMNESDPIYFTLSAAVNEKLMATSMDVSNNRGRVVDKICHE 120
           RNQY+SSI LPSEGKPPNKD+NESDPIYFTLSAAVNEKLMA+SMDVS NRGRVVDKICHE
Sbjct: 61  RNQYNSSITLPSEGKPPNKDVNESDPIYFTLSAAVNEKLMASSMDVSKNRGRVVDKICHE 120

Query: 121 LRTSGYIKRSRELKVDACILLDNFVPKHAGMIGSRMRALRSNSKRSKRHMSMKQHKKCGT 180
           L+ SGY+KRS+ELKVDA ILLDNFVPK AGMIGSRMR LRS SKRSKRHMSMKQHKKCGT
Sbjct: 121 LKNSGYMKRSKELKVDASILLDNFVPKRAGMIGSRMRDLRSISKRSKRHMSMKQHKKCGT 180

Query: 181 FDLPSDFHKFEIFWPMHDMWKNYMKQRLHHVGSGMLSVSLGDQSFKSCRPDALARNLLIA 240
           FDLPSD HK+EIFWPMHDMWK+YMKQRLH+VG                 PDALARNLLIA
Sbjct: 181 FDLPSDCHKYEIFWPMHDMWKSYMKQRLHNVG-----------------PDALARNLLIA 240

Query: 241 DLHGAMIRVVECKIPAFTGISGIMIRETAETFGIVTKDDKFRVVPKKSSVFIFQWDCWKV 300
           DLHGAMIRVVECKIPAFTG SG+MIRETAETFGIVTKDDKFRVVPKKSSVFIFQWDCWKV
Sbjct: 241 DLHGAMIRVVECKIPAFTGTSGVMIRETAETFGIVTKDDKFRVVPKKSSVFIFQWDCWKV 300

Query: 301 TLLGDKLSSRIPSLPSSN 318
           TLLGDKLSSRIPSLPSSN
Sbjct: 301 TLLGDKLSSRIPSLPSSN 300

[Close]

BLAST of HG10020260 vs. NCBI nr
Match: XP_008442652.1 (PREDICTED: uncharacterized protein LOC103486457 isoform X1 [Cucumis melo])

HSP 1 Score: 524.6 bits (1350), Expect = 5.8e-145
Identity = 274/318 (86.16%), Postives = 286/318 (89.94%), Query Frame = 0


Query: 1   MADNKAPQDLRKHALEALERRCAAAKVELLQQQKKISSTEKLKKEVKGKSTLNDSTS-VS 60
           M+D KA QDLRKHALEALERRCAAAKVELLQQQ KISSTEK KKEVKGKS+LND TS VS
Sbjct: 14  MSDKKASQDLRKHALEALERRCAAAKVELLQQQ-KISSTEKSKKEVKGKSSLNDPTSVVS 73

Query: 61  RNQYDSSILLPSEGKPPNKDMNESDPIYFTLSAAVNEKLMATSMDVSNNRGRVVDKICHE 120
           RNQY+SSI LPSEGKPPNKD+NESDPIYFTLSAAVNEKLMA+SMDVS NRGRVVDKICHE
Sbjct: 74  RNQYNSSITLPSEGKPPNKDVNESDPIYFTLSAAVNEKLMASSMDVSKNRGRVVDKICHE 133

Query: 121 LRTSGYIKRSRELKVDACILLDNFVPKHAGMIGSRMRALRSNSKRSKRHMSMKQHKKCGT 180
           L+ SGY+KRS+ELKVDA ILLDNFVPK AGMIGSRMR LRS SKRSKRHMSMKQHKKCGT
Sbjct: 134 LKNSGYMKRSKELKVDASILLDNFVPKRAGMIGSRMRDLRSISKRSKRHMSMKQHKKCGT 193

Query: 181 FDLPSDFHKFEIFWPMHDMWKNYMKQRLHHVGSGMLSVSLGDQSFKSCRPDALARNLLIA 240
           FDLPSD HK+EIFWPMHDMWK+YMKQRLH+VG                 PDALARNLLIA
Sbjct: 194 FDLPSDCHKYEIFWPMHDMWKSYMKQRLHNVG-----------------PDALARNLLIA 253

Query: 241 DLHGAMIRVVECKIPAFTGISGIMIRETAETFGIVTKDDKFRVVPKKSSVFIFQWDCWKV 300
           DLHGAMIRVVECKIPAFTG SG+MIRETAETFGIVTKDDKFRVVPKKSSVFIFQWDCWKV
Sbjct: 254 DLHGAMIRVVECKIPAFTGTSGVMIRETAETFGIVTKDDKFRVVPKKSSVFIFQWDCWKV 313

Query: 301 TLLGDKLSSRIPSLPSSN 318
           TLLGDKLSSRIPSLPSSN
Sbjct: 314 TLLGDKLSSRIPSLPSSN 313

[Close]

BLAST of HG10020260 vs. ExPASy Swiss-Prot
Match: Q9ZW76 (Ribonuclease MRP protein subunit POP4 OS=Arabidopsis thaliana OX=3702 GN=POP4 PE=2 SV=2)

HSP 1 Score: 229.9 bits (585), Expect = 3.9e-59
Identity = 137/315 (43.49%), Postives = 191/315 (60.63%), Query Frame = 0


Query: 1   MADNKAPQDLRKHALEALERRCAAAKVELLQQQKKISSTEKLKKEVKGKSTLNDSTSVSR 60
           M       D  + A+ A+ERR A AK +LLQQQ+     +K +K+ KG S ++   S+  
Sbjct: 1   MGTETVVHDQARWAMAAMERRLAVAKAQLLQQQQ-----QKNEKDKKGTSDVD--VSMKE 60

Query: 61  NQYDSSILLPSEGKPPNKDMNESDPIYFT-LSAAVNEKLMATSMDVSNNRGRVVDKICHE 120
           +    S+  PS+      D  + D + +T LS  V+E L+AT++  S+ +G +VDK+ H 
Sbjct: 61  SHQADSLPTPSKTSIKKVDPKDDDSVAYTKLSHPVDENLLATNVKFSSAKGTIVDKVLHN 120

Query: 121 LRTSG-----YIKRSRELKVDACILLDNFVPKHAGMIGSRMRALRSNSKRSKRHMSMKQH 180
           L  SG     Y++ ++ +K+D  ILLDNFV   +   GS+ +A + +SKRSK  MSMK+ 
Sbjct: 121 LLRSGDSAQKYLQGTKSVKLDNYILLDNFVQSRSSASGSK-KASQKDSKRSKSRMSMKRL 180

Query: 181 KKCGTFDLPSDFHKFEIFWPMHDMWKNYMKQRLHHVGSGMLSVSLGDQSFKSCRPDALAR 240
           KK G   +P D  KF++F PMH MW++YM + +   G   LS++                
Sbjct: 181 KKSGALHIPKDLQKFDLFKPMHGMWESYMMKLIKVTGKIQLSLT---------------- 240

Query: 241 NLLIADLHGAMIRVVECKIPAFTGISGIMIRETAETFGIVTKDDKFRVVPKKSSVFIFQW 300
            LL ADLHGA + V ECKI +FTG+ GIM+RET+ETFGI+T+DDKFRVVPKK SVFI Q 
Sbjct: 241 -LLSADLHGAFMFVAECKIASFTGVQGIMVRETSETFGIITRDDKFRVVPKKLSVFIIQL 290

Query: 301 DCWKVTLLGDKLSSR 310
           DCWK+TL GDK  SR
Sbjct: 301 DCWKITLHGDKFISR 290

[Close]

BLAST of HG10020260 vs. ExPASy Swiss-Prot
Match: O95707 (Ribonuclease P protein subunit p29 OS=Homo sapiens OX=9606 GN=POP4 PE=1 SV=2)

HSP 1 Score: 94.0 bits (232), Expect = 3.3e-18
Identity = 48/154 (31.17%), Postives = 85/154 (55.19%), Query Frame = 0


Query: 156 RALRSNSKRSKRHMSMKQHKKCGTFDLPSDFHKFEIFWPMHDMWKNYMKQRLHHVGSGML 215
           R  R   K+  + +S +Q ++   FD+  +  ++ +F P+H++WK Y++     + SG+ 
Sbjct: 63  RHKRKEKKKKAKGLSARQRRELRLFDIKPEQQRYSLFLPLHELWKQYIRD----LCSGLK 122

Query: 216 SVSLGDQSFKSCRPDALARNLLIADLHGAMIRVVECKIPAFTGISGIMIRETAETFGIVT 275
                       +P  +   LL ADLHGA+I V + K P++ GI+GI+++ET   F I+T
Sbjct: 123 ---------PDTQPQMIQAKLLKADLHGAIISVTKSKCPSYVGITGILLQETKHIFKIIT 182

Query: 276 KDDKFRVVPKKSSVFIFQWDCWKVTLLGDKLSSR 310
           K+D+ +V+PK + VF  + D +   + G K   R
Sbjct: 183 KEDRLKVIPKLNCVFTVETDGFISYIYGSKFQLR 203

[Close]

BLAST of HG10020260 vs. ExPASy Swiss-Prot
Match: Q5M882 (Ribonuclease P protein subunit p29 OS=Rattus norvegicus OX=10116 GN=Pop4 PE=2 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 5.7e-18
Identity = 45/147 (30.61%), Postives = 81/147 (55.10%), Query Frame = 0


Query: 163 KRSKRHMSMKQHKKCGTFDLPSDFHKFEIFWPMHDMWKNYMKQRLHHVGSGMLSVSLGDQ 222
           K+  + +S KQ ++   FD+  +  ++ +F P+H++WK Y++              L + 
Sbjct: 71  KKKSKGLSAKQRRELRLFDIKPEQQRYSLFLPLHELWKQYIR-------------DLCNG 130

Query: 223 SFKSCRPDALARNLLIADLHGAMIRVVECKIPAFTGISGIMIRETAETFGIVTKDDKFRV 282
                +P  +   LL ADLHGA+I V + K P++ G++GI+++ET   F I+TK+D  +V
Sbjct: 131 LKPDTQPQMIQAKLLKADLHGAVISVTKSKCPSYVGVTGILLQETKHVFKIITKEDHLKV 190

Query: 283 VPKKSSVFIFQWDCWKVTLLGDKLSSR 310
           +PK++ VF  + D +   + G K   R
Sbjct: 191 IPKQNCVFTIEIDDFISYIYGSKFQLR 204

[Close]

BLAST of HG10020260 vs. ExPASy Swiss-Prot
Match: Q5R7B0 (Ribonuclease P protein subunit p29 OS=Pongo abelii OX=9601 GN=POP4 PE=2 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 7.4e-18
Identity = 47/154 (30.52%), Postives = 83/154 (53.90%), Query Frame = 0


Query: 156 RALRSNSKRSKRHMSMKQHKKCGTFDLPSDFHKFEIFWPMHDMWKNYMKQRLHHVGSGML 215
           R  R   K+  + +S +Q ++   FD+  +  ++ +F P+H++WK Y++           
Sbjct: 63  RHKRKEKKKKAKGLSARQRRELRLFDIKPEQQRYSLFLPLHELWKQYIR----------- 122

Query: 216 SVSLGDQSFKSCRPDALARNLLIADLHGAMIRVVECKIPAFTGISGIMIRETAETFGIVT 275
              L +      +P  +   LL ADLHGA+I V + K P++ GI+GI+++ET   F I+T
Sbjct: 123 --DLCNGLKPDTQPQMIQAKLLKADLHGAIISVTKSKCPSYVGITGILLQETKHIFKIIT 182

Query: 276 KDDKFRVVPKKSSVFIFQWDCWKVTLLGDKLSSR 310
           K+D+ +V+PK + VF  + D +   + G K   R
Sbjct: 183 KEDRLKVIPKLNCVFTVEIDGFISYIYGSKFQLR 203

[Close]

BLAST of HG10020260 vs. ExPASy Swiss-Prot
Match: Q2KIB9 (Ribonuclease P protein subunit p29 OS=Bos taurus OX=9913 GN=POP4 PE=2 SV=1)

HSP 1 Score: 90.9 bits (224), Expect = 2.8e-17
Identity = 43/151 (28.48%), Postives = 82/151 (54.30%), Query Frame = 0


Query: 159 RSNSKRSKRHMSMKQHKKCGTFDLPSDFHKFEIFWPMHDMWKNYMKQRLHHVGSGMLSVS 218
           +   ++  + +S KQ ++   FD+  +  ++ +F P+H++WK Y++              
Sbjct: 66  QKEKRKKSKGLSAKQRRELRLFDIKPEQQRYSLFLPLHELWKQYIR-------------D 125

Query: 219 LGDQSFKSCRPDALARNLLIADLHGAMIRVVECKIPAFTGISGIMIRETAETFGIVTKDD 278
           L +      +P  +   LL ADLHGA++ V + K P++ G++GI+++ET   F I+TK+D
Sbjct: 126 LCNGLKPDTQPQMIQAKLLKADLHGAIVSVTKSKCPSYVGVTGILLQETKHVFKIITKED 185

Query: 279 KFRVVPKKSSVFIFQWDCWKVTLLGDKLSSR 310
           + +V+PK + VF  + D +   + G K   R
Sbjct: 186 RLKVIPKLNCVFTVEIDGFISYIYGSKFQLR 203

[Close]

BLAST of HG10020260 vs. ExPASy TrEMBL
Match: A0A1S3B6Y6 (uncharacterized protein LOC103486457 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103486457 PE=3 SV=1)

HSP 1 Score: 524.6 bits (1350), Expect = 2.8e-145
Identity = 274/318 (86.16%), Postives = 286/318 (89.94%), Query Frame = 0


Query: 1   MADNKAPQDLRKHALEALERRCAAAKVELLQQQKKISSTEKLKKEVKGKSTLNDSTS-VS 60
           M+D KA QDLRKHALEALERRCAAAKVELLQQQ KISSTEK KKEVKGKS+LND TS VS
Sbjct: 1   MSDKKASQDLRKHALEALERRCAAAKVELLQQQ-KISSTEKSKKEVKGKSSLNDPTSVVS 60

Query: 61  RNQYDSSILLPSEGKPPNKDMNESDPIYFTLSAAVNEKLMATSMDVSNNRGRVVDKICHE 120
           RNQY+SSI LPSEGKPPNKD+NESDPIYFTLSAAVNEKLMA+SMDVS NRGRVVDKICHE
Sbjct: 61  RNQYNSSITLPSEGKPPNKDVNESDPIYFTLSAAVNEKLMASSMDVSKNRGRVVDKICHE 120

Query: 121 LRTSGYIKRSRELKVDACILLDNFVPKHAGMIGSRMRALRSNSKRSKRHMSMKQHKKCGT 180
           L+ SGY+KRS+ELKVDA ILLDNFVPK AGMIGSRMR LRS SKRSKRHMSMKQHKKCGT
Sbjct: 121 LKNSGYMKRSKELKVDASILLDNFVPKRAGMIGSRMRDLRSISKRSKRHMSMKQHKKCGT 180

Query: 181 FDLPSDFHKFEIFWPMHDMWKNYMKQRLHHVGSGMLSVSLGDQSFKSCRPDALARNLLIA 240
           FDLPSD HK+EIFWPMHDMWK+YMKQRLH+VG                 PDALARNLLIA
Sbjct: 181 FDLPSDCHKYEIFWPMHDMWKSYMKQRLHNVG-----------------PDALARNLLIA 240

Query: 241 DLHGAMIRVVECKIPAFTGISGIMIRETAETFGIVTKDDKFRVVPKKSSVFIFQWDCWKV 300
           DLHGAMIRVVECKIPAFTG SG+MIRETAETFGIVTKDDKFRVVPKKSSVFIFQWDCWKV
Sbjct: 241 DLHGAMIRVVECKIPAFTGTSGVMIRETAETFGIVTKDDKFRVVPKKSSVFIFQWDCWKV 300

Query: 301 TLLGDKLSSRIPSLPSSN 318
           TLLGDKLSSRIPSLPSSN
Sbjct: 301 TLLGDKLSSRIPSLPSSN 300

[Close]

BLAST of HG10020260 vs. ExPASy TrEMBL
Match: A0A5A7TR23 (Ribonuclease P protein subunit p29 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold236G003780 PE=3 SV=1)

HSP 1 Score: 524.6 bits (1350), Expect = 2.8e-145
Identity = 274/318 (86.16%), Postives = 286/318 (89.94%), Query Frame = 0


Query: 1   MADNKAPQDLRKHALEALERRCAAAKVELLQQQKKISSTEKLKKEVKGKSTLNDSTS-VS 60
           M+D KA QDLRKHALEALERRCAAAKVELLQQQ KISSTEK KKEVKGKS+LND TS VS
Sbjct: 1   MSDKKASQDLRKHALEALERRCAAAKVELLQQQ-KISSTEKSKKEVKGKSSLNDPTSVVS 60

Query: 61  RNQYDSSILLPSEGKPPNKDMNESDPIYFTLSAAVNEKLMATSMDVSNNRGRVVDKICHE 120
           RNQY+SSI LPSEGKPPNKD+NESDPIYFTLSAAVNEKLMA+SMDVS NRGRVVDKICHE
Sbjct: 61  RNQYNSSITLPSEGKPPNKDVNESDPIYFTLSAAVNEKLMASSMDVSKNRGRVVDKICHE 120

Query: 121 LRTSGYIKRSRELKVDACILLDNFVPKHAGMIGSRMRALRSNSKRSKRHMSMKQHKKCGT 180
           L+ SGY+KRS+ELKVDA ILLDNFVPK AGMIGSRMR LRS SKRSKRHMSMKQHKKCGT
Sbjct: 121 LKNSGYMKRSKELKVDASILLDNFVPKRAGMIGSRMRDLRSISKRSKRHMSMKQHKKCGT 180

Query: 181 FDLPSDFHKFEIFWPMHDMWKNYMKQRLHHVGSGMLSVSLGDQSFKSCRPDALARNLLIA 240
           FDLPSD HK+EIFWPMHDMWK+YMKQRLH+VG                 PDALARNLLIA
Sbjct: 181 FDLPSDCHKYEIFWPMHDMWKSYMKQRLHNVG-----------------PDALARNLLIA 240

Query: 241 DLHGAMIRVVECKIPAFTGISGIMIRETAETFGIVTKDDKFRVVPKKSSVFIFQWDCWKV 300
           DLHGAMIRVVECKIPAFTG SG+MIRETAETFGIVTKDDKFRVVPKKSSVFIFQWDCWKV
Sbjct: 241 DLHGAMIRVVECKIPAFTGTSGVMIRETAETFGIVTKDDKFRVVPKKSSVFIFQWDCWKV 300

Query: 301 TLLGDKLSSRIPSLPSSN 318
           TLLGDKLSSRIPSLPSSN
Sbjct: 301 TLLGDKLSSRIPSLPSSN 300

[Close]

BLAST of HG10020260 vs. ExPASy TrEMBL
Match: A0A1S3B674 (Ribonuclease P protein subunit p29 OS=Cucumis melo OX=3656 GN=LOC103486457 PE=3 SV=1)

HSP 1 Score: 524.6 bits (1350), Expect = 2.8e-145
Identity = 274/318 (86.16%), Postives = 286/318 (89.94%), Query Frame = 0


Query: 1   MADNKAPQDLRKHALEALERRCAAAKVELLQQQKKISSTEKLKKEVKGKSTLNDSTS-VS 60
           M+D KA QDLRKHALEALERRCAAAKVELLQQQ KISSTEK KKEVKGKS+LND TS VS
Sbjct: 14  MSDKKASQDLRKHALEALERRCAAAKVELLQQQ-KISSTEKSKKEVKGKSSLNDPTSVVS 73

Query: 61  RNQYDSSILLPSEGKPPNKDMNESDPIYFTLSAAVNEKLMATSMDVSNNRGRVVDKICHE 120
           RNQY+SSI LPSEGKPPNKD+NESDPIYFTLSAAVNEKLMA+SMDVS NRGRVVDKICHE
Sbjct: 74  RNQYNSSITLPSEGKPPNKDVNESDPIYFTLSAAVNEKLMASSMDVSKNRGRVVDKICHE 133

Query: 121 LRTSGYIKRSRELKVDACILLDNFVPKHAGMIGSRMRALRSNSKRSKRHMSMKQHKKCGT 180
           L+ SGY+KRS+ELKVDA ILLDNFVPK AGMIGSRMR LRS SKRSKRHMSMKQHKKCGT
Sbjct: 134 LKNSGYMKRSKELKVDASILLDNFVPKRAGMIGSRMRDLRSISKRSKRHMSMKQHKKCGT 193

Query: 181 FDLPSDFHKFEIFWPMHDMWKNYMKQRLHHVGSGMLSVSLGDQSFKSCRPDALARNLLIA 240
           FDLPSD HK+EIFWPMHDMWK+YMKQRLH+VG                 PDALARNLLIA
Sbjct: 194 FDLPSDCHKYEIFWPMHDMWKSYMKQRLHNVG-----------------PDALARNLLIA 253

Query: 241 DLHGAMIRVVECKIPAFTGISGIMIRETAETFGIVTKDDKFRVVPKKSSVFIFQWDCWKV 300
           DLHGAMIRVVECKIPAFTG SG+MIRETAETFGIVTKDDKFRVVPKKSSVFIFQWDCWKV
Sbjct: 254 DLHGAMIRVVECKIPAFTGTSGVMIRETAETFGIVTKDDKFRVVPKKSSVFIFQWDCWKV 313

Query: 301 TLLGDKLSSRIPSLPSSN 318
           TLLGDKLSSRIPSLPSSN
Sbjct: 314 TLLGDKLSSRIPSLPSSN 313

[Close]

BLAST of HG10020260 vs. ExPASy TrEMBL
Match: A0A5D3DP72 (Ribonuclease P protein subunit p29 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G002330 PE=3 SV=1)

HSP 1 Score: 524.2 bits (1349), Expect = 3.7e-145
Identity = 274/318 (86.16%), Postives = 285/318 (89.62%), Query Frame = 0


Query: 1   MADNKAPQDLRKHALEALERRCAAAKVELLQQQKKISSTEKLKKEVKGKSTLNDSTS-VS 60
           M+D KA QDLRKHALEALERRCAAAKVELLQQQ KISSTEK KKEVKGKS LND TS VS
Sbjct: 1   MSDKKASQDLRKHALEALERRCAAAKVELLQQQ-KISSTEKSKKEVKGKSALNDPTSVVS 60

Query: 61  RNQYDSSILLPSEGKPPNKDMNESDPIYFTLSAAVNEKLMATSMDVSNNRGRVVDKICHE 120
           RNQY+SSI LPSEGKPPNKD+NESDPIYFTLSAAVNEKLMA+SMDVS NRGRVVDKICHE
Sbjct: 61  RNQYNSSITLPSEGKPPNKDVNESDPIYFTLSAAVNEKLMASSMDVSKNRGRVVDKICHE 120

Query: 121 LRTSGYIKRSRELKVDACILLDNFVPKHAGMIGSRMRALRSNSKRSKRHMSMKQHKKCGT 180
           L+ SGY+KRS+ELKVDA ILLDNFVPK AGMIGSRMR LRS SKRSKRHMSMKQHKKCGT
Sbjct: 121 LKNSGYMKRSKELKVDASILLDNFVPKRAGMIGSRMRDLRSISKRSKRHMSMKQHKKCGT 180

Query: 181 FDLPSDFHKFEIFWPMHDMWKNYMKQRLHHVGSGMLSVSLGDQSFKSCRPDALARNLLIA 240
           FDLPSD HK+EIFWPMHDMWK+YMKQRLH+VG                 PDALARNLLIA
Sbjct: 181 FDLPSDCHKYEIFWPMHDMWKSYMKQRLHNVG-----------------PDALARNLLIA 240

Query: 241 DLHGAMIRVVECKIPAFTGISGIMIRETAETFGIVTKDDKFRVVPKKSSVFIFQWDCWKV 300
           DLHGAMIRVVECKIPAFTG SG+MIRETAETFGIVTKDDKFRVVPKKSSVFIFQWDCWKV
Sbjct: 241 DLHGAMIRVVECKIPAFTGTSGVMIRETAETFGIVTKDDKFRVVPKKSSVFIFQWDCWKV 300

Query: 301 TLLGDKLSSRIPSLPSSN 318
           TLLGDKLSSRIPSLPSSN
Sbjct: 301 TLLGDKLSSRIPSLPSSN 300

[Close]

BLAST of HG10020260 vs. ExPASy TrEMBL
Match: A0A6J1J0L0 (uncharacterized protein LOC111482383 OS=Cucurbita maxima OX=3661 GN=LOC111482383 PE=3 SV=1)

HSP 1 Score: 521.9 bits (1343), Expect = 1.8e-144
Identity = 271/319 (84.95%), Postives = 282/319 (88.40%), Query Frame = 0


Query: 1   MADNKAPQDLRKHALEALERRCAAAKVELLQQQKKISSTEKLKKEVKGKSTLNDSTS--V 60
           MA N A QDLRKHALEALERRCAAAKVELLQQQKK  STEKLKKE KGK+TLNDS+S  V
Sbjct: 1   MAGNVASQDLRKHALEALERRCAAAKVELLQQQKKTGSTEKLKKEFKGKATLNDSSSSVV 60

Query: 61  SRNQYDSSILLPSEGKPPNKDMNESDPIYFTLSAAVNEKLMATSMDVSNNRGRVVDKICH 120
           S NQYDSSILLPSEGKP NKD+NESDPIYFTLSAAVNE LM+T+MDVS+NRGRVVDKICH
Sbjct: 61  SGNQYDSSILLPSEGKPSNKDVNESDPIYFTLSAAVNENLMSTNMDVSSNRGRVVDKICH 120

Query: 121 ELRTSGYIKRSRELKVDACILLDNFVPKHAGMIGSRMRALRSNSKRSKRHMSMKQHKKCG 180
           +LRTSGYIKRSRELKVDA ILLDNFVPK AG IGSR RAL+SNSKRSKRHMSMKQHKKCG
Sbjct: 121 KLRTSGYIKRSRELKVDAWILLDNFVPKRAGKIGSRKRALQSNSKRSKRHMSMKQHKKCG 180

Query: 181 TFDLPSDFHKFEIFWPMHDMWKNYMKQRLHHVGSGMLSVSLGDQSFKSCRPDALARNLLI 240
           TFDLPSDFHKFEIFWPMHDMWK+YMKQRL HVG                 PD LARNLL+
Sbjct: 181 TFDLPSDFHKFEIFWPMHDMWKSYMKQRLCHVG-----------------PDTLARNLLV 240

Query: 241 ADLHGAMIRVVECKIPAFTGISGIMIRETAETFGIVTKDDKFRVVPKKSSVFIFQWDCWK 300
           ADLHGAMI VVECKIPAFTGISGIMIRETAETFGIVTKDDKFRVVPKKSS FIFQWDCWK
Sbjct: 241 ADLHGAMILVVECKIPAFTGISGIMIRETAETFGIVTKDDKFRVVPKKSSAFIFQWDCWK 300

Query: 301 VTLLGDKLSSRIPSLPSSN 318
           +TLLGDKLSSRIPSLPS N
Sbjct: 301 ITLLGDKLSSRIPSLPSKN 302

[Close]

BLAST of HG10020260 vs. TAIR 10
Match: AT2G43190.1 (ribonuclease P family protein )

HSP 1 Score: 229.9 bits (585), Expect = 2.8e-60
Identity = 137/315 (43.49%), Postives = 191/315 (60.63%), Query Frame = 0


Query: 1   MADNKAPQDLRKHALEALERRCAAAKVELLQQQKKISSTEKLKKEVKGKSTLNDSTSVSR 60
           M       D  + A+ A+ERR A AK +LLQQQ+     +K +K+ KG S ++   S+  
Sbjct: 1   MGTETVVHDQARWAMAAMERRLAVAKAQLLQQQQ-----QKNEKDKKGTSDVD--VSMKE 60

Query: 61  NQYDSSILLPSEGKPPNKDMNESDPIYFT-LSAAVNEKLMATSMDVSNNRGRVVDKICHE 120
           +    S+  PS+      D  + D + +T LS  V+E L+AT++  S+ +G +VDK+ H 
Sbjct: 61  SHQADSLPTPSKTSIKKVDPKDDDSVAYTKLSHPVDENLLATNVKFSSAKGTIVDKVLHN 120

Query: 121 LRTSG-----YIKRSRELKVDACILLDNFVPKHAGMIGSRMRALRSNSKRSKRHMSMKQH 180
           L  SG     Y++ ++ +K+D  ILLDNFV   +   GS+ +A + +SKRSK  MSMK+ 
Sbjct: 121 LLRSGDSAQKYLQGTKSVKLDNYILLDNFVQSRSSASGSK-KASQKDSKRSKSRMSMKRL 180

Query: 181 KKCGTFDLPSDFHKFEIFWPMHDMWKNYMKQRLHHVGSGMLSVSLGDQSFKSCRPDALAR 240
           KK G   +P D  KF++F PMH MW++YM + +   G   LS++                
Sbjct: 181 KKSGALHIPKDLQKFDLFKPMHGMWESYMMKLIKVTGKIQLSLT---------------- 240

Query: 241 NLLIADLHGAMIRVVECKIPAFTGISGIMIRETAETFGIVTKDDKFRVVPKKSSVFIFQW 300
            LL ADLHGA + V ECKI +FTG+ GIM+RET+ETFGI+T+DDKFRVVPKK SVFI Q 
Sbjct: 241 -LLSADLHGAFMFVAECKIASFTGVQGIMVRETSETFGIITRDDKFRVVPKKLSVFIIQL 290

Query: 301 DCWKVTLLGDKLSSR 310
           DCWK+TL GDK  SR
Sbjct: 301 DCWKITLHGDKFISR 290

[Close]

BLAST of HG10020260 vs. TAIR 10
Match: AT2G43190.3 (ribonuclease P family protein )

HSP 1 Score: 229.6 bits (584), Expect = 3.6e-60
Identity = 142/316 (44.94%), Postives = 194/316 (61.39%), Query Frame = 0


Query: 1   MADNKAPQDLRKHALEALERRCAAAKVELLQQQKKISSTEKLKKEVKGKSTLNDSTSVSR 60
           M       D  + A+ A+ERR A AK +LLQQQ+     +K +K+ KG S ++ S   S 
Sbjct: 1   MGTETVVHDQARWAMAAMERRLAVAKAQLLQQQQ-----QKNEKDKKGTSDVDVSMKES- 60

Query: 61  NQYDSSILLPSEGKPP-NKDMNESDPIYFT-LSAAVNEKLMATSMDVSNNRGRVVDKICH 120
           +Q DS   LP+  K    KD  + D + +T LS  V+E L+AT++  S+ +G +VDK+ H
Sbjct: 61  HQADS---LPTPSKTSIKKDPKDDDSVAYTKLSHPVDENLLATNVKFSSAKGTIVDKVLH 120

Query: 121 ELRTSG-----YIKRSRELKVDACILLDNFVPKHAGMIGSRMRALRSNSKRSKRHMSMKQ 180
            L  SG     Y++ ++ +K+D  ILLDNFV   +   GS+ +A + +SKRSK  MSMK+
Sbjct: 121 NLLRSGDSAQKYLQGTKSVKLDNYILLDNFVQSRSSASGSK-KASQKDSKRSKSRMSMKR 180

Query: 181 HKKCGTFDLPSDFHKFEIFWPMHDMWKNYMKQRLHHVGSGMLSVSLGDQSFKSCRPDALA 240
            KK G   +P D  KF++F PMH MW++YM + +   G   LS++               
Sbjct: 181 LKKSGALHIPKDLQKFDLFKPMHGMWESYMMKLIKVTGKIQLSLT--------------- 240

Query: 241 RNLLIADLHGAMIRVVECKIPAFTGISGIMIRETAETFGIVTKDDKFRVVPKKSSVFIFQ 300
             LL ADLHGA + V ECKI +FTG+ GIM+RET+ETFGI+T+DDKFRVVPKK SVFI Q
Sbjct: 241 --LLSADLHGAFMFVAECKIASFTGVQGIMVRETSETFGIITRDDKFRVVPKKLSVFIIQ 289

Query: 301 WDCWKVTLLGDKLSSR 310
            DCWK+TL GDK  SR
Sbjct: 301 LDCWKITLHGDKFISR 289

[Close]

BLAST of HG10020260 vs. TAIR 10
Match: AT2G43190.2 (ribonuclease P family protein )

HSP 1 Score: 229.6 bits (584), Expect = 3.6e-60
Identity = 142/316 (44.94%), Postives = 194/316 (61.39%), Query Frame = 0


Query: 1   MADNKAPQDLRKHALEALERRCAAAKVELLQQQKKISSTEKLKKEVKGKSTLNDSTSVSR 60
           M       D  + A+ A+ERR A AK +LLQQQ+     +K +K+ KG S ++ S   S 
Sbjct: 1   MGTETVVHDQARWAMAAMERRLAVAKAQLLQQQQ-----QKNEKDKKGTSDVDVSMKES- 60

Query: 61  NQYDSSILLPSEGKPP-NKDMNESDPIYFT-LSAAVNEKLMATSMDVSNNRGRVVDKICH 120
           +Q DS   LP+  K    KD  + D + +T LS  V+E L+AT++  S+ +G +VDK+ H
Sbjct: 61  HQADS---LPTPSKTSIKKDPKDDDSVAYTKLSHPVDENLLATNVKFSSAKGTIVDKVLH 120

Query: 121 ELRTSG-----YIKRSRELKVDACILLDNFVPKHAGMIGSRMRALRSNSKRSKRHMSMKQ 180
            L  SG     Y++ ++ +K+D  ILLDNFV   +   GS+ +A + +SKRSK  MSMK+
Sbjct: 121 NLLRSGDSAQKYLQGTKSVKLDNYILLDNFVQSRSSASGSK-KASQKDSKRSKSRMSMKR 180

Query: 181 HKKCGTFDLPSDFHKFEIFWPMHDMWKNYMKQRLHHVGSGMLSVSLGDQSFKSCRPDALA 240
            KK G   +P D  KF++F PMH MW++YM + +   G   LS++               
Sbjct: 181 LKKSGALHIPKDLQKFDLFKPMHGMWESYMMKLIKVTGKIQLSLT--------------- 240

Query: 241 RNLLIADLHGAMIRVVECKIPAFTGISGIMIRETAETFGIVTKDDKFRVVPKKSSVFIFQ 300
             LL ADLHGA + V ECKI +FTG+ GIM+RET+ETFGI+T+DDKFRVVPKK SVFI Q
Sbjct: 241 --LLSADLHGAFMFVAECKIASFTGVQGIMVRETSETFGIITRDDKFRVVPKKLSVFIIQ 289

Query: 301 WDCWKVTLLGDKLSSR 310
            DCWK+TL GDK  SR
Sbjct: 301 LDCWKITLHGDKFISR 289

[Close]

BLAST of HG10020260 vs. TAIR 10
Match: AT2G43190.4 (ribonuclease P family protein )

HSP 1 Score: 190.3 bits (482), Expect = 2.4e-48
Identity = 123/310 (39.68%), Postives = 170/310 (54.84%), Query Frame = 0


Query: 1   MADNKAPQDLRKHALEALERRCAAAKVELLQQQKKISSTEKLKKEVKGKSTLNDSTSVSR 60
           M       D  + A+ A+ERR A AK +LLQQQ+     +K +K+ KG S ++   S+  
Sbjct: 1   MGTETVVHDQARWAMAAMERRLAVAKAQLLQQQQ-----QKNEKDKKGTSDVD--VSMKE 60

Query: 61  NQYDSSILLPSEGKPPNKDMNESDPIYFT-LSAAVNEKLMATSMDVSNNRGRVVDKICHE 120
           +    S+  PS+      D  + D + +T LS  V+E L+AT++  S+ +G +VDK    
Sbjct: 61  SHQADSLPTPSKTSIKKVDPKDDDSVAYTKLSHPVDENLLATNVKFSSAKGTIVDK---- 120

Query: 121 LRTSGYIKRSRELKVDACILLDNFVPKHAGMIGSRMRALRSNSKRSKRHMSMKQHKKCGT 180
                                       +   GS+ +A + +SKRSK  MSMK+ KK G 
Sbjct: 121 --------------------------SRSSASGSK-KASQKDSKRSKSRMSMKRLKKSGA 180

Query: 181 FDLPSDFHKFEIFWPMHDMWKNYMKQRLHHVGSGMLSVSLGDQSFKSCRPDALARNLLIA 240
             +P D  KF++F PMH MW++YM + +   G   LS++                 LL A
Sbjct: 181 LHIPKDLQKFDLFKPMHGMWESYMMKLIKVTGKIQLSLT-----------------LLSA 240

Query: 241 DLHGAMIRVVECKIPAFTGISGIMIRETAETFGIVTKDDKFRVVPKKSSVFIFQWDCWKV 300
           DLHGA + V ECKI +FTG+ GIM+RET+ETFGI+T+DDKFRVVPKK SVFI Q DCWK+
Sbjct: 241 DLHGAFMFVAECKIASFTGVQGIMVRETSETFGIITRDDKFRVVPKKLSVFIIQLDCWKI 255

Query: 301 TLLGDKLSSR 310
           TL GDK  SR
Sbjct: 301 TLHGDKFISR 255

The following BLAST results are available for this feature:

BLAST of HG10020260 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038906073.1	8.6e-165	94.34	uncharacterized protein LOC120091963 isoform X1 [Benincasa hispida] >XP_03890607...	[more]
XP_038906078.1	1.4e-162	94.03	uncharacterized protein LOC120091963 isoform X2 [Benincasa hispida]	[more]
XP_038906079.1	2.4e-154	89.94	ribonuclease P protein subunit p29 isoform X3 [Benincasa hispida]	[more]
XP_008442653.1	5.8e-145	86.16	PREDICTED: uncharacterized protein LOC103486457 isoform X2 [Cucumis melo] >XP_00...	[more]
XP_008442652.1	5.8e-145	86.16	PREDICTED: uncharacterized protein LOC103486457 isoform X1 [Cucumis melo]	[more]

BLAST of HG10020260 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZW76	3.9e-59	43.49	Ribonuclease MRP protein subunit POP4 OS=Arabidopsis thaliana OX=3702 GN=POP4 PE...	[more]
O95707	3.3e-18	31.17	Ribonuclease P protein subunit p29 OS=Homo sapiens OX=9606 GN=POP4 PE=1 SV=2	[more]
Q5M882	5.7e-18	30.61	Ribonuclease P protein subunit p29 OS=Rattus norvegicus OX=10116 GN=Pop4 PE=2 SV...	[more]
Q5R7B0	7.4e-18	30.52	Ribonuclease P protein subunit p29 OS=Pongo abelii OX=9601 GN=POP4 PE=2 SV=1	[more]
Q2KIB9	2.8e-17	28.48	Ribonuclease P protein subunit p29 OS=Bos taurus OX=9913 GN=POP4 PE=2 SV=1	[more]

BLAST of HG10020260 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3B6Y6	2.8e-145	86.16	uncharacterized protein LOC103486457 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A5A7TR23	2.8e-145	86.16	Ribonuclease P protein subunit p29 isoform X1 OS=Cucumis melo var. makuwa OX=119...	[more]
A0A1S3B674	2.8e-145	86.16	Ribonuclease P protein subunit p29 OS=Cucumis melo OX=3656 GN=LOC103486457 PE=3 ...	[more]
A0A5D3DP72	3.7e-145	86.16	Ribonuclease P protein subunit p29 isoform X1 OS=Cucumis melo var. makuwa OX=119...	[more]
A0A6J1J0L0	1.8e-144	84.95	uncharacterized protein LOC111482383 OS=Cucurbita maxima OX=3661 GN=LOC111482383...	[more]

BLAST of HG10020260 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G43190.1	2.8e-60	43.49	ribonuclease P family protein	[more]
AT2G43190.3	3.6e-60	44.94	ribonuclease P family protein	[more]
AT2G43190.2	3.6e-60	44.94	ribonuclease P family protein	[more]
AT2G43190.4	2.4e-48	39.68	ribonuclease P family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 15..35
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 51..68
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 38..82
IPR002730	Ribonuclease P protein subunit Rpp29/RNP1	SMART	SM00538	pop4_2	coord: 230..313 e-value: 2.5E-14 score: 63.6
IPR002730	Ribonuclease P protein subunit Rpp29/RNP1	PFAM	PF01868	UPF0086	coord: 235..309 e-value: 8.8E-21 score: 73.7
IPR036980	Ribonuclease P/MRP subunit Rpp29 superfamily	GENE3D	2.30.30.210	Ribonuclease P/MRP, subunit p29	coord: 228..312 e-value: 1.9E-22 score: 80.8
IPR016848	Ribonuclease P/MRP subunit Rpp29	PANTHER	PTHR13348	RIBONUCLEASE P SUBUNIT P29	coord: 17..309
IPR023534	Rof/RNase P-like	SUPERFAMILY	101744	Rof/RNase P subunit-like	coord: 233..309

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10020260.1	HG10020260.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0090502	RNA phosphodiester bond hydrolysis, endonucleolytic
biological_process	GO:0006364	rRNA processing
biological_process	GO:0001682	tRNA 5'-leader removal
biological_process	GO:0006396	RNA processing
biological_process	GO:0008033	tRNA processing
cellular_component	GO:0005730	nucleolus
cellular_component	GO:0000172	ribonuclease MRP complex
cellular_component	GO:0030677	ribonuclease P complex
molecular_function	GO:0004526	ribonuclease P activity
molecular_function	GO:0033204	ribonuclease P RNA binding
molecular_function	GO:0003723	RNA binding